AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0482610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 184 sgRNAs with CRISPR-Local

Find 701 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGTCCTTCAACTGGTTTC+CGG 0.201883 3_3:+89782812 None:intergenic
GGCACGACGGTTGTGATTTC+CGG 0.212173 3_3:+89794001 None:intergenic
CTTACCACCATTATGGAAAA+AGG 0.217318 3_3:+89782593 None:intergenic
TCATAGACCATTGCTGTTTC+AGG 0.233426 3_3:+89793443 None:intergenic
TCTTTCACGGCCTCTGCTTC+TGG 0.244422 3_3:+89782305 None:intergenic
TGTTATAGGGAAGGCTTTAC+AGG 0.255703 3_3:-89784569 Msa0482610:CDS
TGATCTTCTTACCACCATTA+TGG 0.263611 3_3:+89782586 None:intergenic
GGGAAGGTTGAACTTGTTAT+AGG 0.269970 3_3:-89784583 Msa0482610:intron
AGAGTGCAGACAAAAGAAAA+AGG 0.300366 3_3:-89782200 Msa0482610:three_prime_UTR
AATCCATGGCTACATTGTTT+TGG 0.321201 3_3:+89791630 None:intergenic
TACTAGGAGAGTTTATTATA+AGG 0.331738 3_3:+89783070 None:intergenic
GACGACGATTGGAGCGCTGC+TGG 0.334502 3_3:-89783015 Msa0482610:three_prime_UTR
TTGTCTTATTCATGTTTGTA+AGG 0.341859 3_3:-89781931 Msa0482610:three_prime_UTR
ATAGAAATTACCTTCATTGC+TGG 0.344639 3_3:+89786311 None:intergenic
GGAAGGTTGAACTTGTTATA+GGG 0.349484 3_3:-89784582 Msa0482610:intron
GAACAGAATTAGAAAAGAAT+TGG 0.350315 3_3:-89782231 Msa0482610:three_prime_UTR
GTTACTGTTCTCCTCTTTCA+TGG 0.353231 3_3:+89781980 None:intergenic
ACCTGTTGTTGAGGAGGAAC+AGG 0.353886 3_3:-89782143 Msa0482610:three_prime_UTR
TCACCGTTTGGTCCTTCAAC+TGG 0.368680 3_3:+89782805 None:intergenic
CACGGCCTCTGCTTCTGGTT+CGG 0.369611 3_3:+89782310 None:intergenic
CCTGTTTCTTCTTCAACAAC+AGG 0.378883 3_3:+89782074 None:intergenic
CATGGTCGTCTGACCTCTAT+TGG 0.380973 3_3:-89794174 Msa0482610:five_prime_UTR
CATGATGTTGTTGATTAACT+TGG 0.381017 3_3:+89791657 None:intergenic
GACATATATACAATAATAAT+AGG 0.384374 3_3:-89781908 Msa0482610:three_prime_UTR
GCATTATTCCTTACCAAGGT+TGG 0.393911 3_3:+89787589 None:intergenic
TATATCAGCTAAACGGTTCC+AGG 0.397945 3_3:-89782633 Msa0482610:three_prime_UTR
GACTGTTCTTCTTCAACAAC+AGG 0.399762 3_3:+89782108 None:intergenic
CTCCGCCGCCGCATCTTTCA+CGG 0.402279 3_3:+89782292 None:intergenic
TTGATTCGACGGTCCTTCAA+TGG 0.407153 3_3:+89782543 None:intergenic
CCCTGTTCCTCCTCAACAAC+AGG 0.409818 3_3:+89782142 None:intergenic
ATGTTGAGAAATACTGTTGT+TGG 0.415231 3_3:-89786362 Msa0482610:five_prime_UTR
CACACAGGATGGTGGCGGCT+AGG 0.418682 3_3:+89794206 None:intergenic
TGACAATATGCAGAAACATT+AGG 0.421476 3_3:-89782728 Msa0482610:three_prime_UTR
AAAACAGAAGGCAGCGGCGG+CGG 0.422341 3_3:-89782168 Msa0482610:three_prime_UTR
TTCACGTTCACACTCTTACT+AGG 0.423730 3_3:+89783054 None:intergenic
CTCTTACATTTGCTTTCAAA+AGG 0.425620 3_3:-89791556 Msa0482610:intron
AGCATCTTCCACTCTGCAGC+TGG 0.428640 3_3:-89787622 Msa0482610:five_prime_UTR
TTGTGTGCAGGAATCTCAAA+AGG 0.437894 3_3:-89787675 Msa0482610:intron
GCGATTGTTCTGACGACGAT+TGG 0.439602 3_3:-89783026 Msa0482610:three_prime_UTR
ACACAGGATGGTGGCGGCTA+GGG 0.439620 3_3:+89794207 None:intergenic
TTCTCCATCTCGAGCACAAA+GGG 0.449644 3_3:-89782386 Msa0482610:three_prime_UTR
AGAGAGGAACCCAGCAATGA+AGG 0.452334 3_3:-89786321 Msa0482610:intron
AACTATAGTGGTGAATTTCC+CGG 0.454426 3_3:+89793980 None:intergenic
CGTGAAAGATGCGGCGGCGG+AGG 0.456789 3_3:-89782291 Msa0482610:three_prime_UTR
GGCAAAATCAGACTTTCATC+CGG 0.458365 3_3:+89782331 None:intergenic
TTGTTCAAGGGCAACGGCAC+GGG 0.462682 3_3:-89782675 Msa0482610:three_prime_UTR
AAACAGAAGTCACCCTTGAA+TGG 0.463952 3_3:-89792295 Msa0482610:five_prime_UTR
ATGATGGCAAGGGGTTACTT+TGG 0.465051 3_3:-89782874 Msa0482610:three_prime_UTR
TGCTAGATCTCAACCATCAC+AGG 0.466439 3_3:-89794123 Msa0482610:five_prime_UTR
AGGTGAGCATAGAGCGAGCC+TGG 0.468217 3_3:-89782901 Msa0482610:three_prime_UTR
AAAACAGAGGAGAATTATTA+CGG 0.469830 3_3:+89794146 None:intergenic
TAGAAATTACCTTCATTGCT+GGG 0.469950 3_3:+89786312 None:intergenic
AAGGTGGCAACCCCACGATA+TGG 0.470944 3_3:-89782845 Msa0482610:three_prime_UTR
GAAATCACAACCGTCGTGCC+GGG 0.473897 3_3:-89793998 Msa0482610:five_prime_UTR
ATACTGTTGTTGGATTGTAT+TGG 0.474265 3_3:-89786352 Msa0482610:five_prime_UTR
CCTCAAATATATCAGCTAAA+CGG 0.475136 3_3:-89782640 Msa0482610:three_prime_UTR
GGGGTTACTTTGGCGAATCA+AGG 0.475807 3_3:-89782864 Msa0482610:three_prime_UTR
CCTGTTGTTGAAGAAGAAAC+AGG 0.476095 3_3:-89782074 Msa0482610:three_prime_UTR
GGTAAGAAGATCAAATGATA+TGG 0.476569 3_3:-89782576 Msa0482610:three_prime_UTR
ACCAGTCAGCAGTCACCGTT+TGG 0.478305 3_3:+89782793 None:intergenic
GATCCACTGCTATGGCTGCC+TGG 0.478469 3_3:+89782615 None:intergenic
CCGTTTAGCTGATATATTTG+AGG 0.479945 3_3:+89782640 None:intergenic
ACGATATGGCTCAGATAGTC+CGG 0.480032 3_3:-89782831 Msa0482610:three_prime_UTR
TCTGATCAATTGAAGAATGT+TGG 0.486727 3_3:+89782767 None:intergenic
ACGACGATTGGAGCGCTGCT+GGG 0.493917 3_3:-89783014 Msa0482610:three_prime_UTR
CTTGCTACTTTCAAATGCAT+TGG 0.495927 3_3:-89793471 Msa0482610:five_prime_UTR
TGTATTAGACAAAACTATAG+TGG 0.497843 3_3:+89793968 None:intergenic
GGCCGTGAAAGATGCGGCGG+CGG 0.503912 3_3:-89782294 Msa0482610:three_prime_UTR
GGTCAGACGACCATGATTCA+TGG 0.504433 3_3:+89794182 None:intergenic
GACTATCTGAGCCATATCGT+GGG 0.505106 3_3:+89782834 None:intergenic
GGAAATCACAACCGTCGTGC+CGG 0.505467 3_3:-89793999 Msa0482610:five_prime_UTR
CTATCACAAACTGATTCAAA+TGG 0.507941 3_3:-89793383 Msa0482610:intron
TGTCTTATTCATGTTTGTAA+GGG 0.510817 3_3:-89781930 Msa0482610:three_prime_UTR
GGCTCGCTCTATGCTCACCT+TGG 0.511804 3_3:+89782904 None:intergenic
TGTGTGTCACGCTGGAAAGA+AGG 0.511921 3_3:-89782012 Msa0482610:three_prime_UTR
GTTCAAGGGTGACTTCTGTA+AGG 0.519476 3_3:+89788938 None:intergenic
TGGTGGAATAAATCCATTGA+AGG 0.521855 3_3:-89782556 Msa0482610:three_prime_UTR
CATTTCAAAATTAGCATCAG+TGG 0.526194 3_3:-89782510 Msa0482610:three_prime_UTR
CATTCCCTTTGTGCTCGAGA+TGG 0.526411 3_3:+89782382 None:intergenic
CAGCGGTTTGTGTGTCACGC+TGG 0.529091 3_3:-89782020 Msa0482610:three_prime_UTR
AAATTAGCATCAGTGGAAGC+AGG 0.530727 3_3:-89782503 Msa0482610:three_prime_UTR
GTTGAGTATTTCTATTGTGG+TGG 0.537980 3_3:+89794085 None:intergenic
GGAGAGTTTATTATAAGGCA+TGG 0.540554 3_3:+89783075 None:intergenic
CTTTGTGCTCGAGATGGAGA+AGG 0.541288 3_3:+89782388 None:intergenic
CGCAAGAGTCTGAGAGAAGG+AGG 0.542769 3_3:-89783524 Msa0482610:CDS
CTCAAACAATTCAGCCCACA+TGG 0.543331 3_3:-89782420 Msa0482610:three_prime_UTR
TATTACGGTGTGGCCAATAG+AGG 0.544038 3_3:+89794161 None:intergenic
TCCTGTGTGGCCATGAATCA+TGG 0.544457 3_3:-89794192 Msa0482610:five_prime_UTR
AGAGTCTGAGAGAAGGAGGC+TGG 0.544545 3_3:-89783520 Msa0482610:CDS
CATAAGAAGAGCTCGACAAA+AGG 0.544608 3_3:-89790327 Msa0482610:intron
CTCACCTTGGAAGATCAATC+CGG 0.546651 3_3:+89782917 None:intergenic
CATGTGGGCTGAATTGTTTG+AGG 0.547913 3_3:+89782421 None:intergenic
GGCAGATGATACCATGAAAG+AGG 0.550832 3_3:-89781991 Msa0482610:three_prime_UTR
TTTGATGTTGGTGACGGCAA+GGG 0.554205 3_3:-89782354 Msa0482610:three_prime_UTR
GATTTGATAAATAGCATTGT+GGG 0.554399 3_3:-89791611 Msa0482610:five_prime_UTR
AAGAAGATCAAATGATATGG+TGG 0.555458 3_3:-89782573 Msa0482610:three_prime_UTR
ACCAAACGGTGACTGCTGAC+TGG 0.557184 3_3:-89782794 Msa0482610:three_prime_UTR
GCGGACAGCGATTAGACGAC+AGG 0.558533 3_3:+89793418 None:intergenic
GGTTGAACTTGTTATAGGGA+AGG 0.559000 3_3:-89784578 Msa0482610:CDS
CGTCGTCAGAACAATCGCTC+TGG 0.559566 3_3:+89783031 None:intergenic
GTGGACAATTCTTGATTCGA+CGG 0.560717 3_3:+89782532 None:intergenic
GGACTATCTGAGCCATATCG+TGG 0.563782 3_3:+89782833 None:intergenic
AATGCTATTTATCAAATCCA+TGG 0.567447 3_3:+89791616 None:intergenic
GATGTTGAGTATTTCTATTG+TGG 0.567599 3_3:+89794082 None:intergenic
GCTTGCTTTCCGCCTCCATG+TGG 0.569570 3_3:-89788898 Msa0482610:five_prime_UTR
TGCGGCGGCGGAGGATGACA+TGG 0.569937 3_3:-89782282 Msa0482610:three_prime_UTR
TTTCAAAATATGGCCTGTGA+TGG 0.570361 3_3:+89794110 None:intergenic
CTTGGAAGATCAATCCGGCT+TGG 0.572230 3_3:+89782922 None:intergenic
AAACCAGTTGAAGGACCAAA+CGG 0.575464 3_3:-89782808 Msa0482610:three_prime_UTR
ATGTTGGTGACGGCAAGGGC+CGG 0.577752 3_3:-89782350 Msa0482610:three_prime_UTR
TGTTGAGGAGGAACAGGGGA+CGG 0.579335 3_3:-89782137 Msa0482610:three_prime_UTR
TTACAGAAGTCACCCTTGAA+CGG 0.580359 3_3:-89788936 Msa0482610:five_prime_UTR
ATAGTCCGGAAACCAGTTGA+AGG 0.580735 3_3:-89782817 Msa0482610:three_prime_UTR
GGTTGTGATTTCCGGAGCGG+TGG 0.581760 3_3:+89794009 None:intergenic
TTTATTATAAGGCATGGCAA+AGG 0.583686 3_3:+89783081 None:intergenic
CTTGCTTTCCGCCTCCATGT+GGG 0.584966 3_3:-89788897 Msa0482610:intron
CTTGTTCAAGGGCAACGGCA+CGG 0.585024 3_3:-89782676 Msa0482610:three_prime_UTR
GCGGCGGCGACCTGTTGTTG+AGG 0.587172 3_3:-89782152 Msa0482610:three_prime_UTR
GCGGCGGAGGATGACATGGC+AGG 0.587196 3_3:-89782278 Msa0482610:three_prime_UTR
AGTTCATACCCACATGGAGG+CGG 0.591713 3_3:+89788889 None:intergenic
AGTTCATACCCACATGGAGG+CGG 0.591713 3_3:+89792248 None:intergenic
TGGAATCAGACAACCAACCT+TGG 0.592819 3_3:-89787602 Msa0482610:intron
AAAATCTTGTTCAAGGGCAA+CGG 0.593607 3_3:-89782681 Msa0482610:three_prime_UTR
GGTTCATGCTCGTGCCCACA+AGG 0.595310 3_3:+89782442 None:intergenic
TTCCGGGTTGAGGAATGATG+TGG 0.597028 3_3:-89782472 Msa0482610:three_prime_UTR
CAAGCCGGATTGATCTTCCA+AGG 0.599168 3_3:-89782921 Msa0482610:three_prime_UTR
GTTATAGGGAAGGCTTTACA+GGG 0.599251 3_3:-89784568 Msa0482610:CDS
TGTATTGGATATGAAGAGAG+AGG 0.599342 3_3:-89786337 Msa0482610:five_prime_UTR
GCGGCGACCTGTTGTTGAGG+AGG 0.599549 3_3:-89782149 Msa0482610:three_prime_UTR
ATGGCCACACAGGATGGTGG+CGG 0.604016 3_3:+89794201 None:intergenic
GAGGAAGCATCTGAGTCTCG+TGG 0.606612 3_3:-89782992 Msa0482610:three_prime_UTR
CGGAAAACAGAAGGCAGCGG+CGG 0.608256 3_3:-89782171 Msa0482610:three_prime_UTR
CTTCTCCATCTCGAGCACAA+AGG 0.609176 3_3:-89782387 Msa0482610:three_prime_UTR
GGCAGTGCCTGAAACAGCAA+TGG 0.610775 3_3:-89793450 Msa0482610:five_prime_UTR
AACAGTGGTGTGCAAAGCAG+TGG 0.611554 3_3:-89782969 Msa0482610:three_prime_UTR
GCTTGCAATCCGCCTCCATG+TGG 0.617321 3_3:-89792257 Msa0482610:five_prime_UTR
CCTGTTGTTGAGGAGGAACA+GGG 0.617616 3_3:-89782142 Msa0482610:three_prime_UTR
TCTCGCAAGAGTCTGAGAGA+AGG 0.621181 3_3:-89783527 Msa0482610:CDS
CTCAAGCTGATTGCACATGT+TGG 0.621279 3_3:-89783473 Msa0482610:CDS
TGATTCATGGCCACACAGGA+TGG 0.621624 3_3:+89794195 None:intergenic
AGGGTTGGTCGGAAAACAGA+AGG 0.623203 3_3:-89782180 Msa0482610:three_prime_UTR
TGGGTGTTGATGAAGAGCAC+TGG 0.623576 3_3:-89791592 Msa0482610:five_prime_UTR
AAATGTAAGAGTCTATTGCT+CGG 0.623627 3_3:+89791568 None:intergenic
GGATTTGATAAATAGCATTG+TGG 0.624286 3_3:-89791612 Msa0482610:five_prime_UTR
TGATGTGGTCGATAACCTTG+TGG 0.625176 3_3:-89782457 Msa0482610:three_prime_UTR
AGCAGAGGCCGTGAAAGATG+CGG 0.626576 3_3:-89782300 Msa0482610:three_prime_UTR
TGTTAGTGTTGCAAAGCCAG+AGG 0.627152 3_3:-89783407 Msa0482610:intron
AGGAAAATCCTCCATACGAG+TGG 0.627209 3_3:-89782708 Msa0482610:three_prime_UTR
GGTCGGAAAACAGAAGGCAG+CGG 0.629323 3_3:-89782174 Msa0482610:three_prime_UTR
TGAGAAAAGAAAGGCAGCAG+CGG 0.631176 3_3:-89782037 Msa0482610:three_prime_UTR
ATCTGAGTCTCGTGGAACAG+TGG 0.632990 3_3:-89782984 Msa0482610:three_prime_UTR
TGTGTGCAGGAATCTCAAAA+GGG 0.637356 3_3:-89787674 Msa0482610:intron
ACGATTGGAGCGCTGCTGGG+AGG 0.639799 3_3:-89783011 Msa0482610:three_prime_UTR
CTTGCAATCCGCCTCCATGT+GGG 0.643414 3_3:-89792256 Msa0482610:intron
TGAGGAGGAACAGGGGACGG+CGG 0.647114 3_3:-89782134 Msa0482610:three_prime_UTR
ACCATGATTCATGGCCACAC+AGG 0.647180 3_3:+89794191 None:intergenic
GACGGTTGTGATTTCCGGAG+CGG 0.653507 3_3:+89794006 None:intergenic
GTTCCAGGCAGCCATAGCAG+TGG 0.655061 3_3:-89782618 Msa0482610:three_prime_UTR
GATGTGGTCGATAACCTTGT+GGG 0.657261 3_3:-89782456 Msa0482610:three_prime_UTR
AGAGGCCGTGAAAGATGCGG+CGG 0.658254 3_3:-89782297 Msa0482610:three_prime_UTR
AGACCAAAACAATGTAGCCA+TGG 0.663887 3_3:-89791633 Msa0482610:five_prime_UTR
TTCATGGCCACACAGGATGG+TGG 0.665137 3_3:+89794198 None:intergenic
GGGTGTATTAAGCAGAACGT+TGG 0.667674 3_3:-89787654 Msa0482610:five_prime_UTR
GTCTGATTCCAGCTGCAGAG+TGG 0.668776 3_3:+89787614 None:intergenic
GTTACTTTGGCGAATCAAGG+TGG 0.671819 3_3:-89782861 Msa0482610:three_prime_UTR
GACCACATCATTCCTCAACC+CGG 0.675189 3_3:+89782470 None:intergenic
AGAAGGATCACTACACCATG+TGG 0.675520 3_3:+89782405 None:intergenic
ACTATCTGAGCCATATCGTG+GGG 0.676046 3_3:+89782835 None:intergenic
ACAGTGGTGTGCAAAGCAGT+GGG 0.679285 3_3:-89782968 Msa0482610:three_prime_UTR
CTAGCCGCCACCATCCTGTG+TGG 0.684155 3_3:-89794205 Msa0482610:five_prime_UTR
GAAGGATCACTACACCATGT+GGG 0.690866 3_3:+89782406 None:intergenic
TGGTGAATTTCCCGGCACGA+CGG 0.692724 3_3:+89793988 None:intergenic
AGAGGAGAATTATTACGGTG+TGG 0.692788 3_3:+89794151 None:intergenic
TGAAGAAGAACAGTCGACGG+CGG 0.702492 3_3:-89782100 Msa0482610:three_prime_UTR
TCGGAAAGTTCATACCCACA+TGG 0.703855 3_3:+89792242 None:intergenic
TGTTGAAGAAGAAACAGGCA+CGG 0.705165 3_3:-89782069 Msa0482610:three_prime_UTR
CTGTTGTTGAGGAGGAACAG+GGG 0.707349 3_3:-89782141 Msa0482610:three_prime_UTR
GTTGGTGACTGAATCTTGTG+AGG 0.714213 3_3:-89790363 Msa0482610:five_prime_UTR
TCGGAAAGTTCATACCCACA+TGG 0.716395 3_3:+89788883 None:intergenic
TGTTGAAGAAGAACAGTCGA+CGG 0.719998 3_3:-89782103 Msa0482610:three_prime_UTR
GTGATAGAGCATCTACTCTG+CGG 0.724045 3_3:+89793399 None:intergenic
GAAAGTTCATACCCACATGG+AGG 0.729975 3_3:+89792245 None:intergenic
GAAAGTTCATACCCACATGG+AGG 0.739568 3_3:+89788886 None:intergenic
TGAAGAAGAAACAGGCACGG+CGG 0.751492 3_3:-89782066 Msa0482610:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTTATAAACTTTGAATA+TGG - chr3_3:89782809-89782828 Msa0482610:three_prime_UTR 10.0%
!! AAAATAATCAAGTTAATTAT+AGG - chr3_3:89783764-89783783 Msa0482610:intron 10.0%
!!! TAGGTTTTATTTTTATTATA+TGG - chr3_3:89783783-89783802 Msa0482610:intron 10.0%
!! TTTATGTTATTATAGATAAT+AGG - chr3_3:89784855-89784874 Msa0482610:intron 10.0%
!!! AAAATTATTTTACTAATCAA+AGG - chr3_3:89785554-89785573 Msa0482610:intron 10.0%
!! AAAATAATCAAGTTAATTAT+AGG - chr3_3:89783764-89783783 Msa0482610:intron 10.0%
!!! TAGGTTTTATTTTTATTATA+TGG - chr3_3:89783783-89783802 Msa0482610:intron 10.0%
!!! AAAAGTTGATTATTTTTTAA+GGG + chr3_3:89789157-89789176 None:intergenic 10.0%
!!! TTGAAAAATTAACTTTTTTT+TGG - chr3_3:89789563-89789582 Msa0482610:intron 10.0%
!!! GAAAAAGTATTATTTATAAT+TGG - chr3_3:89790615-89790634 Msa0482610:intron 10.0%
!! GTAATACAATTTATTATTTA+TGG - chr3_3:89791148-89791167 Msa0482610:intron 10.0%
!!! ATAAATACTTTTGTTTTTTA+TGG - chr3_3:89791565-89791584 Msa0482610:five_prime_UTR 10.0%
!!! TAAATACTTTTGTTTTTTAT+GGG - chr3_3:89791566-89791585 Msa0482610:five_prime_UTR 10.0%
!!! TTTTTAATGTTTTTTTTTTG+TGG - chr3_3:89791983-89792002 Msa0482610:intron 10.0%
!! ATTTAAATTAAATATGTATG+TGG + chr3_3:89792888-89792907 None:intergenic 10.0%
!!! AATATAAGATTTCTTTTTGT+TGG - chr3_3:89782301-89782320 Msa0482610:three_prime_UTR 15.0%
!! AATATGTTTAGATTAAATGT+TGG + chr3_3:89782361-89782380 None:intergenic 15.0%
!!! AGATACATTTTTTTTTTTGA+AGG + chr3_3:89783615-89783634 None:intergenic 15.0%
!! TTAGAATACAGTAAATTTAT+TGG + chr3_3:89783730-89783749 None:intergenic 15.0%
!!! TTTTGATACTTAATTTACTA+TGG - chr3_3:89784220-89784239 Msa0482610:intron 15.0%
!!! TGCTTTTTTAATTAACAAAA+AGG - chr3_3:89784887-89784906 Msa0482610:intron 15.0%
!!! ATTTTATTTTGGAGATATAT+TGG - chr3_3:89785204-89785223 Msa0482610:intron 15.0%
!!! GAAATATGAAATTCTTTTTT+TGG - chr3_3:89785637-89785656 Msa0482610:intron 15.0%
!!! AATAACTTTTCAAATTTTCT+TGG + chr3_3:89786050-89786069 None:intergenic 15.0%
!! GTTTAAATTTCACTTTAATT+AGG - chr3_3:89786175-89786194 Msa0482610:intron 15.0%
!! TTTATGACAATAATTTCAAA+TGG - chr3_3:89786396-89786415 Msa0482610:intron 15.0%
!! TTAGAATTCAGTAAATTTAA+TGG + chr3_3:89787095-89787114 None:intergenic 15.0%
!! ATACTTAATTTACTATGATA+TGG - chr3_3:89787572-89787591 Msa0482610:intron 15.0%
!! ATATTAGTTATTATTATTCC+TGG - chr3_3:89787905-89787924 Msa0482610:intron 15.0%
!! AAAATAAAAAAGACAAGAAA+TGG + chr3_3:89788288-89788307 None:intergenic 15.0%
!!! TTTAATGTAGAGATAAATTT+TGG + chr3_3:89788605-89788624 None:intergenic 15.0%
!! GTAAATATAATTCAACAAAA+AGG + chr3_3:89788980-89788999 None:intergenic 15.0%
!!! GGAAAAGTTTATTATTTTTT+GGG + chr3_3:89789104-89789123 None:intergenic 15.0%
!!! TATTATTTTCTGTTTTGAAA+GGG + chr3_3:89789127-89789146 None:intergenic 15.0%
!!! TTATTATTTTCTGTTTTGAA+AGG + chr3_3:89789128-89789147 None:intergenic 15.0%
!!! CAAAAGTTGATTATTTTTTA+AGG + chr3_3:89789158-89789177 None:intergenic 15.0%
!!! CTTAAAAAATAATCAACTTT+TGG - chr3_3:89789156-89789175 Msa0482610:intron 15.0%
!!! ATATTTTGTCAAAAAACTTT+TGG - chr3_3:89789181-89789200 Msa0482610:intron 15.0%
!! AATTAAATGATATAATCTCT+AGG - chr3_3:89789234-89789253 Msa0482610:intron 15.0%
!!! AGTTAATTTTTCAATCTATT+CGG + chr3_3:89789557-89789576 None:intergenic 15.0%
!! TTTAAAAACAAAAAAACTAC+TGG + chr3_3:89789981-89790000 None:intergenic 15.0%
!!! AGTAAAACATATTTGATTTT+GGG - chr3_3:89790011-89790030 Msa0482610:intron 15.0%
!! TACAAAAATAAGAACAAAAT+AGG + chr3_3:89790414-89790433 None:intergenic 15.0%
!!! ATTTTGTTCTTATTTTTGTA+CGG - chr3_3:89790414-89790433 Msa0482610:intron 15.0%
!! AAAAATTGAAATTTAAGTGA+TGG + chr3_3:89791313-89791332 None:intergenic 15.0%
!!! TTTTAACAATTTACTCTTAT+AGG + chr3_3:89791502-89791521 None:intergenic 15.0%
!!! TGTGATTTTTTATTTTGTTA+AGG - chr3_3:89792174-89792193 Msa0482610:intron 15.0%
!!! CATTTTTTTTTATGTATGTA+TGG - chr3_3:89792475-89792494 Msa0482610:intron 15.0%
!! GACATATATACAATAATAAT+AGG - chr3_3:89794261-89794280 Msa0482610:five_prime_UTR 15.0%
!! AAAACACAAAAAATCATGAT+CGG - chr3_3:89782122-89782141 Msa0482610:three_prime_UTR 20.0%
!!! ACCATTTGATTTAATGAAAT+TGG - chr3_3:89782263-89782282 Msa0482610:three_prime_UTR 20.0%
!! ACCAATTTCATTAAATCAAA+TGG + chr3_3:89782267-89782286 None:intergenic 20.0%
!! TCTAAAGATTAGTGAAAAAA+CGG + chr3_3:89783149-89783168 None:intergenic 20.0%
!!! CTTTAGAATAAACTTAAGAA+AGG - chr3_3:89783162-89783181 Msa0482610:intron 20.0%
!! TCATACATGAAATCTATATT+GGG + chr3_3:89783382-89783401 None:intergenic 20.0%
!! TTCATACATGAAATCTATAT+TGG + chr3_3:89783383-89783402 None:intergenic 20.0%
!!! TTTTTTTTTGAAGGAAAAGA+TGG + chr3_3:89783606-89783625 None:intergenic 20.0%
!!! TTTTTTTCCTCTAAATTTGT+TGG - chr3_3:89784183-89784202 Msa0482610:intron 20.0%
!! AATATTTCCAACAAATTTAG+AGG + chr3_3:89784193-89784212 None:intergenic 20.0%
!! ATACTTAATTTACTATGGTA+TGG - chr3_3:89784225-89784244 Msa0482610:intron 20.0%
!! ATCTTTAATGATACTTTAGT+GGG - chr3_3:89784278-89784297 Msa0482610:intron 20.0%
!!! TGGAAATTTAATTTGTGAAT+GGG + chr3_3:89784396-89784415 None:intergenic 20.0%
!!! TTGGAAATTTAATTTGTGAA+TGG + chr3_3:89784397-89784416 None:intergenic 20.0%
!!! ATGATGGAAAATTACTAAAA+AGG + chr3_3:89784978-89784997 None:intergenic 20.0%
!!! AAGCTAAATTTTCAATATGA+TGG + chr3_3:89784994-89785013 None:intergenic 20.0%
!!! GATTATGTCAATAACTTTTT+TGG + chr3_3:89785030-89785049 None:intergenic 20.0%
!!! ATGATTTATTGAATGAGTTT+TGG + chr3_3:89785127-89785146 None:intergenic 20.0%
!! TTATACATAAATGAGTGTTT+GGG + chr3_3:89785155-89785174 None:intergenic 20.0%
!! TTTATACATAAATGAGTGTT+TGG + chr3_3:89785156-89785175 None:intergenic 20.0%
!!! GTTGGTTCAAAATTTTATTT+TGG - chr3_3:89785193-89785212 Msa0482610:intron 20.0%
!! CATATTAGAAAGTAAAATGT+CGG + chr3_3:89785503-89785522 None:intergenic 20.0%
!! TAAAATAAATGTCAAACAGA+AGG + chr3_3:89785774-89785793 None:intergenic 20.0%
!!! TTCTGTTTGACATTTATTTT+AGG - chr3_3:89785773-89785792 Msa0482610:intron 20.0%
!!! TCTATTTCTTGACTTTTATT+TGG - chr3_3:89785879-89785898 Msa0482610:intron 20.0%
!!! CTATTTCTTGACTTTTATTT+GGG - chr3_3:89785880-89785899 Msa0482610:intron 20.0%
!!! TAAGCAATGGATTAAAAAAA+TGG - chr3_3:89785923-89785942 Msa0482610:intron 20.0%
!! AAAAGTTATTGAGGTTTATA+AGG + chr3_3:89786099-89786118 None:intergenic 20.0%
!! AAATCATACAAAAGTTATTG+AGG + chr3_3:89786108-89786127 None:intergenic 20.0%
!!! AAGAAATTAAAGTTTAAAGC+TGG + chr3_3:89786153-89786172 None:intergenic 20.0%
!! TGTCATAAATGAAACAAAAA+CGG + chr3_3:89786385-89786404 None:intergenic 20.0%
!!! ATAAAAAACATGCTTTGTTT+TGG - chr3_3:89786544-89786563 Msa0482610:intron 20.0%
!! TCATACATGAAATCTATATT+GGG + chr3_3:89783382-89783401 None:intergenic 20.0%
!! TTCATACATGAAATCTATAT+TGG + chr3_3:89783383-89783402 None:intergenic 20.0%
!!! AATATAGTTTTCTATTCAAC+AGG + chr3_3:89786810-89786829 None:intergenic 20.0%
!!! CATTGAAACATTTTTGTTAT+AGG - chr3_3:89786933-89786952 Msa0482610:intron 20.0%
!! ATCTTAAATGATACTTTAGT+GGG - chr3_3:89787616-89787635 Msa0482610:five_prime_UTR 20.0%
!!! ATTGCAATAAATTTTGATTG+AGG + chr3_3:89787861-89787880 None:intergenic 20.0%
!!! TGAAAATAGTTTTGATTGAA+GGG + chr3_3:89788032-89788051 None:intergenic 20.0%
!! AATGTTGAAAAATAGTTAGA+TGG + chr3_3:89788106-89788125 None:intergenic 20.0%
!! CTTTCTTAAGTTTATTCTAA+AGG + chr3_3:89783164-89783183 None:intergenic 20.0%
!! TTAGAATAAACTTAAGAAAG+AGG - chr3_3:89783164-89783183 Msa0482610:intron 20.0%
!! TATGAAAGAGTTATTGATAT+TGG - chr3_3:89788374-89788393 Msa0482610:intron 20.0%
!! CTCTACATTAAAAAGTTTAA+TGG - chr3_3:89788613-89788632 Msa0482610:intron 20.0%
!! TCATTACCTTGATTATTAAT+TGG - chr3_3:89788700-89788719 Msa0482610:intron 20.0%
!!! CATTTTTTAATATAACTTGC+TGG - chr3_3:89788848-89788867 Msa0482610:intron 20.0%
!!! AGTTTATTATTTTTTGGGAT+TGG + chr3_3:89789099-89789118 None:intergenic 20.0%
!!! GGGAAAAGTTTATTATTTTT+TGG + chr3_3:89789105-89789124 None:intergenic 20.0%
!!! ATTATTTTCTGTTTTGAAAG+GGG + chr3_3:89789126-89789145 None:intergenic 20.0%
!!! GTTAATTTTTCAATCTATTC+GGG + chr3_3:89789556-89789575 None:intergenic 20.0%
!!! ACTTTTATTTCACTTATTGT+TGG - chr3_3:89789690-89789709 Msa0482610:intron 20.0%
!! AAGTATTTAGTAAGAAATTC+AGG - chr3_3:89789898-89789917 Msa0482610:intron 20.0%
!! AGTATTTAGTAAGAAATTCA+GGG - chr3_3:89789899-89789918 Msa0482610:intron 20.0%
!!! GAGTAAAACATATTTGATTT+TGG - chr3_3:89790010-89790029 Msa0482610:intron 20.0%
!!! CTCTTTTTGCAATTTAAATT+TGG - chr3_3:89790184-89790203 Msa0482610:intron 20.0%
!!! CAATACATAGTTTTCATTAA+TGG - chr3_3:89790220-89790239 Msa0482610:intron 20.0%
!! AGAAAATAAAAATAAGTGTC+TGG + chr3_3:89790337-89790356 None:intergenic 20.0%
!! ATTACAAAAAAATACGTGTT+CGG + chr3_3:89790377-89790396 None:intergenic 20.0%
!!! TTTTTGAATGCTAAATTTAG+AGG - chr3_3:89790590-89790609 Msa0482610:intron 20.0%
!! TCATTTCATCAATTGAATTT+GGG - chr3_3:89790832-89790851 Msa0482610:intron 20.0%
!! AGTTATTTGAAGGAAATTAT+TGG - chr3_3:89791073-89791092 Msa0482610:intron 20.0%
!! TTTCTTTCCAAAATATTTAC+TGG + chr3_3:89791245-89791264 None:intergenic 20.0%
!! GTTGAAAGATAATTTATGAA+AGG - chr3_3:89791361-89791380 Msa0482610:intron 20.0%
!! GTAAATTGTTAAAATCCTAT+AGG - chr3_3:89791508-89791527 Msa0482610:intron 20.0%
!! AGCAAATATAGTTTGAAAAA+AGG + chr3_3:89791714-89791733 None:intergenic 20.0%
!!! TTTGTATAACTTTTTAGCTA+AGG + chr3_3:89791738-89791757 None:intergenic 20.0%
!!! ATTGTCTTTTGTTAAACATT+TGG - chr3_3:89791776-89791795 Msa0482610:intron 20.0%
!! TAATTCTTGTAAATTTCAGT+TGG - chr3_3:89792053-89792072 Msa0482610:intron 20.0%
!! CATGGATATCTAAAAAAAAA+TGG + chr3_3:89792266-89792285 None:intergenic 20.0%
!!! CATTTTTTTTTAGATATCCA+TGG - chr3_3:89792264-89792283 Msa0482610:five_prime_UTR 20.0%
!!! TACTTTTAAAAAGCTAAGAA+AGG + chr3_3:89792297-89792316 None:intergenic 20.0%
!!! TTTAAGTAGAAATCGTTTTT+TGG - chr3_3:89792394-89792413 Msa0482610:intron 20.0%
!! GAAAAATGTAAAGACAAAAT+TGG - chr3_3:89792424-89792443 Msa0482610:intron 20.0%
!! ATAAACATGATTAACCATTA+TGG - chr3_3:89793044-89793063 Msa0482610:intron 20.0%
! AAAACAGAGGAGAATTATTA+CGG + chr3_3:89782026-89782045 None:intergenic 25.0%
!!! GATTTTTTGTGTTTTTGTAG+AGG + chr3_3:89782117-89782136 None:intergenic 25.0%
! TGTATTAGACAAAACTATAG+TGG + chr3_3:89782204-89782223 None:intergenic 25.0%
! TGGATTACTTGATTATGATT+TGG - chr3_3:89782829-89782848 Msa0482610:three_prime_UTR 25.0%
!!! TGATTATGATTTGGTGATTT+AGG - chr3_3:89782838-89782857 Msa0482610:three_prime_UTR 25.0%
!!! GATTATGATTTGGTGATTTA+GGG - chr3_3:89782839-89782858 Msa0482610:three_prime_UTR 25.0%
!! TTATTTTCACTGAATCATAC+AGG + chr3_3:89782925-89782944 None:intergenic 25.0%
! ATAGATTTCATGTATGAACT+TGG - chr3_3:89783385-89783404 Msa0482610:intron 25.0%
!! TCTATTCAAATGATAATGCA+GGG + chr3_3:89783433-89783452 None:intergenic 25.0%
!! TTCTATTCAAATGATAATGC+AGG + chr3_3:89783434-89783453 None:intergenic 25.0%
!!! GGAAAAAAATTAACTTGTGT+TGG + chr3_3:89784172-89784191 None:intergenic 25.0%
!!! TTTAAACCCTTTTTTCTATC+AGG + chr3_3:89784251-89784270 None:intergenic 25.0%
! AGAAAAAAGGGTTTAAAGAA+AGG - chr3_3:89784254-89784273 Msa0482610:intron 25.0%
! CATCTTTAATGATACTTTAG+TGG - chr3_3:89784277-89784296 Msa0482610:intron 25.0%
! AAATCTAAGGGAATAAAGAA+AGG - chr3_3:89784308-89784327 Msa0482610:intron 25.0%
!! AATGCTATTTATCAAATCCA+TGG + chr3_3:89784556-89784575 None:intergenic 25.0%
! GATTTGATAAATAGCATTGT+GGG - chr3_3:89784558-89784577 Msa0482610:CDS 25.0%
! TATTACAATCACTATCTGAT+TGG - chr3_3:89784636-89784655 Msa0482610:intron 25.0%
! TGATCATATATGAAAAGTAG+AGG + chr3_3:89784778-89784797 None:intergenic 25.0%
!! AGATCAATTGATTTCATGTA+CGG - chr3_3:89784797-89784816 Msa0482610:intron 25.0%
!! ATTTTGAACCAACAGAAATT+GGG + chr3_3:89785186-89785205 None:intergenic 25.0%
!! AATTTTGAACCAACAGAAAT+TGG + chr3_3:89785187-89785206 None:intergenic 25.0%
!! AGATATATTGGACTTTTTGT+TGG - chr3_3:89785216-89785235 Msa0482610:intron 25.0%
! ATCTAAGCTTCTAAATATGT+TGG - chr3_3:89785250-89785269 Msa0482610:intron 25.0%
! AACAATTACACAAAGTCTTA+GGG + chr3_3:89785308-89785327 None:intergenic 25.0%
! GCATATTAGAAGATAAAATG+TGG - chr3_3:89785447-89785466 Msa0482610:intron 25.0%
!!! AATTTTTTGCGTTTCTTCAA+AGG + chr3_3:89785540-89785559 None:intergenic 25.0%
! AGTAAATACGAACATTTGAA+AGG + chr3_3:89785681-89785700 None:intergenic 25.0%
! AAATGTTCGTATTTACTAAG+AGG - chr3_3:89785684-89785703 Msa0482610:intron 25.0%
!! ATTTTAGGCTATGAATAAGT+TGG - chr3_3:89785788-89785807 Msa0482610:intron 25.0%
! TCCATTGCTTAATTACTAAA+AGG + chr3_3:89785914-89785933 None:intergenic 25.0%
! ATTTAAAGAAGTTAACTCGA+TGG + chr3_3:89786026-89786045 None:intergenic 25.0%
! AGACAATAAAAGTGAACAAA+AGG + chr3_3:89786243-89786262 None:intergenic 25.0%
!! GTAGAACTTTTTGTTGATAT+TGG - chr3_3:89786320-89786339 Msa0482610:intron 25.0%
! GTCATAAATGAAACAAAAAC+GGG + chr3_3:89786384-89786403 None:intergenic 25.0%
! ATTTCAAATGGAAAAATACC+TGG - chr3_3:89786408-89786427 Msa0482610:intron 25.0%
! ATAGATTTCATGTATGAACT+TGG - chr3_3:89783385-89783404 Msa0482610:intron 25.0%
! TACAGTTTACTCATAAATGT+TGG + chr3_3:89786900-89786919 None:intergenic 25.0%
!! GAATACAGTTGAATTGTTTT+TGG + chr3_3:89787032-89787051 None:intergenic 25.0%
! TACTTGTGTAATCATCTTAA+TGG + chr3_3:89787350-89787369 None:intergenic 25.0%
! AAAAATCTTTCCAACAACTT+TGG + chr3_3:89787541-89787560 None:intergenic 25.0%
!!! ATGTCTCTCTTTTTTCTATT+AGG + chr3_3:89787598-89787617 None:intergenic 25.0%
! CATCTTAAATGATACTTTAG+TGG - chr3_3:89787615-89787634 Msa0482610:five_prime_UTR 25.0%
!! TATTCCTGGAGTATTATAAT+AGG - chr3_3:89787919-89787938 Msa0482610:intron 25.0%
! AAAAGAATTCGTAACTAACA+AGG + chr3_3:89788000-89788019 None:intergenic 25.0%
!!! CTGAAAATAGTTTTGATTGA+AGG + chr3_3:89788033-89788052 None:intergenic 25.0%
!!! AGTTAGATGGCTTTTAAAAT+GGG + chr3_3:89788093-89788112 None:intergenic 25.0%
!!! TAGTTAGATGGCTTTTAAAA+TGG + chr3_3:89788094-89788113 None:intergenic 25.0%
!! TTCTAAAGGTTAGTGAAAAA+TGG + chr3_3:89788330-89788349 None:intergenic 25.0%
! TAAACTAAATTATTGTGTGC+AGG - chr3_3:89788482-89788501 Msa0482610:intron 25.0%
! CATGTTCCAATTAATAATCA+AGG + chr3_3:89788709-89788728 None:intergenic 25.0%
!!! ATGCTTTTAAGTACCTTTAT+TGG - chr3_3:89788726-89788745 Msa0482610:intron 25.0%
! GTTGAATTATATTTACACCT+TGG - chr3_3:89788984-89789003 Msa0482610:intron 25.0%
!!! TTATTTTCTGTTTTGAAAGG+GGG + chr3_3:89789125-89789144 None:intergenic 25.0%
!! AATATACACACCATAGTTTT+AGG - chr3_3:89789306-89789325 Msa0482610:intron 25.0%
! TTATGAAAACTCATTCAAAC+AGG + chr3_3:89790037-89790056 None:intergenic 25.0%
!!! GAACACGTATTTTTTTGTAA+TGG - chr3_3:89790376-89790395 Msa0482610:five_prime_UTR 25.0%
!! GATAAGCACTTTAGTTTATT+TGG + chr3_3:89790501-89790520 None:intergenic 25.0%
!!! ATCAGCTTTGTATTTGTTTT+TGG - chr3_3:89790565-89790584 Msa0482610:intron 25.0%
!! TCTATTTTCTTTAAGTGCTT+AGG + chr3_3:89790643-89790662 None:intergenic 25.0%
! TGAAAAAGGAATACTAGAAA+GGG + chr3_3:89790739-89790758 None:intergenic 25.0%
! ATGAAAAAGGAATACTAGAA+AGG + chr3_3:89790740-89790759 None:intergenic 25.0%
! CTCATTTCATCAATTGAATT+TGG - chr3_3:89790831-89790850 Msa0482610:intron 25.0%
!!! AGCATTTTGGTTTTCTATAT+TGG - chr3_3:89790895-89790914 Msa0482610:intron 25.0%
! ATTTCATAGTGCCTTTAATA+TGG - chr3_3:89790938-89790957 Msa0482610:intron 25.0%
! TGATAAGTTTAATACCTTGT+AGG - chr3_3:89790986-89791005 Msa0482610:intron 25.0%
! ATTTCCTTCAAATAACTAGA+GGG + chr3_3:89791070-89791089 None:intergenic 25.0%
! AATTTCCTTCAAATAACTAG+AGG + chr3_3:89791071-89791090 None:intergenic 25.0%
!! TATCACTCAAATATTTTCAC+TGG + chr3_3:89791125-89791144 None:intergenic 25.0%
! ATTATTTATGGAATAACCAC+TGG - chr3_3:89791160-89791179 Msa0482610:intron 25.0%
!!! TGATTATTTTTCCTTCAGAT+TGG + chr3_3:89791411-89791430 None:intergenic 25.0%
!! TATGAAAGGTTTTACCTTTA+TGG - chr3_3:89791450-89791469 Msa0482610:intron 25.0%
!!! TACTTTTGTTTTTTATGGGA+AGG - chr3_3:89791570-89791589 Msa0482610:five_prime_UTR 25.0%
! CAGAAAAAACCTTAAAATGT+GGG + chr3_3:89791645-89791664 None:intergenic 25.0%
! TGAAGACAAATAGTAACATA+AGG - chr3_3:89791824-89791843 Msa0482610:intron 25.0%
!!! TTTTTTTTTTGTGGATGATG+TGG - chr3_3:89791992-89792011 Msa0482610:intron 25.0%
! AAAAGGCTTGAAATGAAAAA+TGG + chr3_3:89792321-89792340 None:intergenic 25.0%
!! TTTTTCATTTCAAGCCTTTT+AGG - chr3_3:89792321-89792340 Msa0482610:five_prime_UTR 25.0%
! TACTTAAATCATGTACAACT+TGG + chr3_3:89792382-89792401 None:intergenic 25.0%
!!! TTAATACATTGTTTTGCCTT+TGG - chr3_3:89792548-89792567 Msa0482610:intron 25.0%
! AGAAATAAACTCAAAGTGAA+GGG + chr3_3:89792605-89792624 None:intergenic 25.0%
!! GTTCAAAAGTTTTCAAATGA+TGG - chr3_3:89792986-89793005 Msa0482610:intron 25.0%
!! AAGTTTTCAAATGATGGTTA+TGG - chr3_3:89792992-89793011 Msa0482610:intron 25.0%
! TACTAGGAGAGTTTATTATA+AGG + chr3_3:89793102-89793121 None:intergenic 25.0%
! GAACAGAATTAGAAAAGAAT+TGG - chr3_3:89793938-89793957 Msa0482610:intron 25.0%
!! TTGTCTTATTCATGTTTGTA+AGG - chr3_3:89794238-89794257 Msa0482610:five_prime_UTR 25.0%
!! TGTCTTATTCATGTTTGTAA+GGG - chr3_3:89794239-89794258 Msa0482610:five_prime_UTR 25.0%
!! TGTGGTGGTTTTTCAAAATA+TGG + chr3_3:89782072-89782091 None:intergenic 30.0%
! GATGTTGAGTATTTCTATTG+TGG + chr3_3:89782090-89782109 None:intergenic 30.0%
! ATCATGATCGGATCATTTTA+CGG - chr3_3:89782134-89782153 Msa0482610:three_prime_UTR 30.0%
GAGAAATAACAATCTATGAC+AGG - chr3_3:89782569-89782588 Msa0482610:three_prime_UTR 30.0%
CAGTGCATGAAATAAAAATG+TGG + chr3_3:89782627-89782646 None:intergenic 30.0%
! CTATCACAAACTGATTCAAA+TGG - chr3_3:89782786-89782805 Msa0482610:three_prime_UTR 30.0%
AAGATTATAGCATGCAAAGT+TGG + chr3_3:89782882-89782901 None:intergenic 30.0%
ACTTTGCATGCTATAATCTT+AGG - chr3_3:89782882-89782901 Msa0482610:three_prime_UTR 30.0%
!! AAAAACGGACAATGTTTTTG+AGG + chr3_3:89783134-89783153 None:intergenic 30.0%
AGCTTCTATATGTTTCAATG+TGG - chr3_3:89783305-89783324 Msa0482610:intron 30.0%
ATGTATGAACTTGGCTAAAA+TGG - chr3_3:89783394-89783413 Msa0482610:intron 30.0%
!! CGTTGAGACATTTTTGTTAT+AGG - chr3_3:89783568-89783587 Msa0482610:intron 30.0%
! GAATACAGTTGAACTGTTTT+GGG + chr3_3:89783667-89783686 None:intergenic 30.0%
!!! CATTTTTGAGTTCCATTCAA+GGG + chr3_3:89783889-89783908 None:intergenic 30.0%
!!! TCATTTTTGAGTTCCATTCA+AGG + chr3_3:89783890-89783909 None:intergenic 30.0%
TACTTGTGTAGTCATCTTAA+TGG + chr3_3:89783991-89784010 None:intergenic 30.0%
! TTCTTACTAGCTTACAAATC+AGG + chr3_3:89784029-89784048 None:intergenic 30.0%
!! AATTTTTCAGCTGTAAGCTA+TGG - chr3_3:89784353-89784372 Msa0482610:intron 30.0%
! CATGATGTTGTTGATTAACT+TGG + chr3_3:89784515-89784534 None:intergenic 30.0%
GGATTTGATAAATAGCATTG+TGG - chr3_3:89784557-89784576 Msa0482610:CDS 30.0%
AAATGTAAGAGTCTATTGCT+CGG + chr3_3:89784604-89784623 None:intergenic 30.0%
CTCTTACATTTGCTTTCAAA+AGG - chr3_3:89784613-89784632 Msa0482610:intron 30.0%
! CAGACTTTTTGTTCAGATTT+AGG + chr3_3:89784691-89784710 None:intergenic 30.0%
TCATATATGAAAAGTAGAGG+TGG + chr3_3:89784775-89784794 None:intergenic 30.0%
CAACTAAAGTGCATAATCTA+AGG + chr3_3:89785076-89785095 None:intergenic 30.0%
CAACAATTACACAAAGTCTT+AGG + chr3_3:89785309-89785328 None:intergenic 30.0%
TAGAGTTCACGTTAGATATT+GGG + chr3_3:89785594-89785613 None:intergenic 30.0%
TTAGAGTTCACGTTAGATAT+TGG + chr3_3:89785595-89785614 None:intergenic 30.0%
!!! TTCTTTTTTTGGTGATAGAG+TGG - chr3_3:89785648-89785667 Msa0482610:intron 30.0%
TACGAACATTTGAAAGGTAA+CGG + chr3_3:89785675-89785694 None:intergenic 30.0%
!! TTTCTTGACTTTTATTTGGG+TGG - chr3_3:89785883-89785902 Msa0482610:intron 30.0%
! GCCTTTTAGTAATTAAGCAA+TGG - chr3_3:89785910-89785929 Msa0482610:intron 30.0%
AGAAAGAAAACCGCTTAAAA+TGG + chr3_3:89785996-89786015 None:intergenic 30.0%
CACTTTAATTAGGACATTCA+CGG - chr3_3:89786185-89786204 Msa0482610:intron 30.0%
AAGGACAACATATTGTATGT+TGG + chr3_3:89786224-89786243 None:intergenic 30.0%
CATACGATAATGCAATTAAG+AGG - chr3_3:89786286-89786305 Msa0482610:intron 30.0%
AGCTACTATATGTTTGAATG+TGG - chr3_3:89786638-89786657 Msa0482610:intron 30.0%
AAAACTAAAGCTGCCAAATT+GGG + chr3_3:89786786-89786805 None:intergenic 30.0%
TAAAACTAAAGCTGCCAAAT+TGG + chr3_3:89786787-89786806 None:intergenic 30.0%
!! TCCATCTTTTCCTTCTAAAA+AGG - chr3_3:89786967-89786986 Msa0482610:intron 30.0%
!! TCCTTTTTAGAAGGAAAAGA+TGG + chr3_3:89786971-89786990 None:intergenic 30.0%
! TTGAGCATTTCCTTTTTAGA+AGG + chr3_3:89786980-89786999 None:intergenic 30.0%
!!! GTTGAATTGTTTTTGGTGAA+AGG + chr3_3:89787025-89787044 None:intergenic 30.0%
CAAACACAAATGAAGGTTAT+CGG + chr3_3:89787308-89787327 None:intergenic 30.0%
AGTACAACAAACACAAATGA+AGG + chr3_3:89787315-89787334 None:intergenic 30.0%
TACTTACAAATCAGGATCAA+AGG + chr3_3:89787380-89787399 None:intergenic 30.0%
ACAGTTCTTACTTACAAATC+AGG + chr3_3:89787388-89787407 None:intergenic 30.0%
!!! TTTTTTTCCTCCAAAGTTGT+TGG - chr3_3:89787528-89787547 Msa0482610:intron 30.0%
CAAACTATGACACAAGTTAT+TGG - chr3_3:89787696-89787715 Msa0482610:intron 30.0%
TTCTCAATCAGAGTAATTAC+AGG - chr3_3:89787783-89787802 Msa0482610:intron 30.0%
AGTTCCTATTATAATACTCC+AGG + chr3_3:89787926-89787945 None:intergenic 30.0%
AACTAACAAGGAAAAGACTA+AGG + chr3_3:89787988-89788007 None:intergenic 30.0%
AGTAGAAATTTAACTGCACA+TGG - chr3_3:89788425-89788444 Msa0482610:intron 30.0%
TAACAGTGAACTTAAGTGAT+AGG + chr3_3:89788461-89788480 None:intergenic 30.0%
CAGATTGCATAAAATGCATA+AGG + chr3_3:89788666-89788685 None:intergenic 30.0%
!! TTTAATATAACTTGCTGGTG+TGG - chr3_3:89788853-89788872 Msa0482610:intron 30.0%
!! TTAATATAACTTGCTGGTGT+GGG - chr3_3:89788854-89788873 Msa0482610:intron 30.0%
ATTTCTATGGAATATGTCCA+AGG + chr3_3:89789004-89789023 None:intergenic 30.0%
ACGTGTTCATTCAATTTCTA+TGG + chr3_3:89789017-89789036 None:intergenic 30.0%
GAATTTGCAGTTTGTGTATT+TGG - chr3_3:89789049-89789068 Msa0482610:intron 30.0%
!! AACTTTTGGAGATATGTTTC+AGG - chr3_3:89789195-89789214 Msa0482610:intron 30.0%
!!! TAGGTTTTTTTTGCCAAACA+AGG + chr3_3:89789497-89789516 None:intergenic 30.0%
TTGAAGAGAAGAAGAAAAGT+AGG + chr3_3:89789516-89789535 None:intergenic 30.0%
TTCGGGTATAAAGATAGAAA+AGG + chr3_3:89789539-89789558 None:intergenic 30.0%
ATGTTGAGAAATACTGTTGT+TGG - chr3_3:89789807-89789826 Msa0482610:intron 30.0%
ATACTGTTGTTGGATTGTAT+TGG - chr3_3:89789817-89789836 Msa0482610:intron 30.0%
TAGAAATTACCTTCATTGCT+GGG + chr3_3:89789860-89789879 None:intergenic 30.0%
ATAGAAATTACCTTCATTGC+TGG + chr3_3:89789861-89789880 None:intergenic 30.0%
CTTAAACTAACTTGAATGCA+AGG - chr3_3:89790276-89790295 Msa0482610:intron 30.0%
GAAAAAGGAATACTAGAAAG+GGG + chr3_3:89790738-89790757 None:intergenic 30.0%
! ATCCACATTTCTAAGCATTT+TGG - chr3_3:89790882-89790901 Msa0482610:intron 30.0%
AACCAAAATGCTTAGAAATG+TGG + chr3_3:89790887-89790906 None:intergenic 30.0%
ATCATTCTCACTTTCAACAA+AGG + chr3_3:89790970-89790989 None:intergenic 30.0%
TTTCCTTCAAATAACTAGAG+GGG + chr3_3:89791069-89791088 None:intergenic 30.0%
TATATGCGTACATGTTACAA+AGG - chr3_3:89791219-89791238 Msa0482610:intron 30.0%
! ACAAAGGCCAGTAAATATTT+TGG - chr3_3:89791235-89791254 Msa0482610:intron 30.0%
ACATCATGTCTACATAAACT+TGG + chr3_3:89791343-89791362 None:intergenic 30.0%
! AAAATCCTATAGGCTTTATC+TGG - chr3_3:89791518-89791537 Msa0482610:intron 30.0%
! AAATCCTATAGGCTTTATCT+GGG - chr3_3:89791519-89791538 Msa0482610:intron 30.0%
! GATTTTCTTCCCACATTTTA+AGG - chr3_3:89791633-89791652 Msa0482610:five_prime_UTR 30.0%
GCAGAAAAAACCTTAAAATG+TGG + chr3_3:89791646-89791665 None:intergenic 30.0%
ATATGGCAGCAAGAAAAATA+CGG + chr3_3:89791674-89791693 None:intergenic 30.0%
! TCTTTTGTTAAACATTTGGC+AGG - chr3_3:89791780-89791799 Msa0482610:intron 30.0%
TAAGGTTATCAAAGTTCAAG+AGG - chr3_3:89791842-89791861 Msa0482610:intron 30.0%
AAGGTTATCAAAGTTCAAGA+GGG - chr3_3:89791843-89791862 Msa0482610:intron 30.0%
AAATCCATTTCCAACTTCAA+TGG + chr3_3:89791922-89791941 None:intergenic 30.0%
! ATTGAAGTTGGAAATGGATT+TGG - chr3_3:89791921-89791940 Msa0482610:intron 30.0%
AAGGATGAGTAGTATGAAAA+TGG - chr3_3:89792193-89792212 Msa0482610:intron 30.0%
ATGAGTAGTATGAAAATGGT+TGG - chr3_3:89792197-89792216 Msa0482610:intron 30.0%
TAAAAGCAATACAAAGCCAA+AGG + chr3_3:89792567-89792586 None:intergenic 30.0%
TCAAAGTGAAGGGAAAAAAA+AGG + chr3_3:89792595-89792614 None:intergenic 30.0%
GAGAAATAAACTCAAAGTGA+AGG + chr3_3:89792606-89792625 None:intergenic 30.0%
AGTGTTGTAAAGGGAAAATT+TGG + chr3_3:89792790-89792809 None:intergenic 30.0%
TTTGGAAGTAGTGTTGTAAA+GGG + chr3_3:89792799-89792818 None:intergenic 30.0%
ATTTGGAAGTAGTGTTGTAA+AGG + chr3_3:89792800-89792819 None:intergenic 30.0%
TACAACACTACTTCCAAATT+TGG - chr3_3:89792801-89792820 Msa0482610:intron 30.0%
GAATTTGAGTCATAGTTCAA+CGG + chr3_3:89792836-89792855 None:intergenic 30.0%
AACATAACAAGTGACTATGT+TGG + chr3_3:89792969-89792988 None:intergenic 30.0%
AACATGATTAACCATTATGG+AGG - chr3_3:89793047-89793066 Msa0482610:intron 30.0%
TTTATTATAAGGCATGGCAA+AGG + chr3_3:89793091-89793110 None:intergenic 30.0%
TCTGATCAATTGAAGAATGT+TGG + chr3_3:89793405-89793424 None:intergenic 30.0%
TGACAATATGCAGAAACATT+AGG - chr3_3:89793441-89793460 Msa0482610:five_prime_UTR 30.0%
TGGATGAAAAATCTTGTTCA+AGG - chr3_3:89793481-89793500 Msa0482610:five_prime_UTR 30.0%
GGATGAAAAATCTTGTTCAA+GGG - chr3_3:89793482-89793501 Msa0482610:five_prime_UTR 30.0%
CCTCAAATATATCAGCTAAA+CGG - chr3_3:89793529-89793548 Msa0482610:intron 30.0%
GGTAAGAAGATCAAATGATA+TGG - chr3_3:89793593-89793612 Msa0482610:intron 30.0%
AAGAAGATCAAATGATATGG+TGG - chr3_3:89793596-89793615 Msa0482610:intron 30.0%
!!! CTGATGCTAATTTTGAAATG+TGG + chr3_3:89793659-89793678 None:intergenic 30.0%
CATTTCAAAATTAGCATCAG+TGG - chr3_3:89793659-89793678 Msa0482610:intron 30.0%
! TCTTTTCTAATTCTGTTCAG+AGG + chr3_3:89793936-89793955 None:intergenic 30.0%
TTGAGATCTAGCAAAAACAG+AGG + chr3_3:89782039-89782058 None:intergenic 35.0%
TTTCAAAATATGGCCTGTGA+TGG + chr3_3:89782062-89782081 None:intergenic 35.0%
! GTTGAGTATTTCTATTGTGG+TGG + chr3_3:89782087-89782106 None:intergenic 35.0%
AACTATAGTGGTGAATTTCC+CGG + chr3_3:89782192-89782211 None:intergenic 35.0%
CTGATTTCTTCGTTTCTTCT+TGG - chr3_3:89782644-89782663 Msa0482610:three_prime_UTR 35.0%
TTCTTCTTGGAATGTGATCA+AGG - chr3_3:89782657-89782676 Msa0482610:three_prime_UTR 35.0%
TCTTCTTGGAATGTGATCAA+GGG - chr3_3:89782658-89782677 Msa0482610:three_prime_UTR 35.0%
!! CTTGCTACTTTCAAATGCAT+TGG - chr3_3:89782698-89782717 Msa0482610:three_prime_UTR 35.0%
AGAGATGGAGAAATGAAGTA+AGG + chr3_3:89783048-89783067 None:intergenic 35.0%
TGCCAACGTTTATGAGTAAA+CGG - chr3_3:89783530-89783549 Msa0482610:CDS 35.0%
TACCGTTTACTCATAAACGT+TGG + chr3_3:89783535-89783554 None:intergenic 35.0%
! GGAATACAGTTGAACTGTTT+TGG + chr3_3:89783668-89783687 None:intergenic 35.0%
ATTCAGTCGTAAATGTTTGC+AGG + chr3_3:89783689-89783708 None:intergenic 35.0%
TGCAAACATTTACGACTGAA+TGG - chr3_3:89783688-89783707 Msa0482610:intron 35.0%
CAAACACGAATGAAGATTGT+CGG + chr3_3:89783949-89783968 None:intergenic 35.0%
TTACAAATCAGGATCAAAGG+TGG + chr3_3:89784018-89784037 None:intergenic 35.0%
AGCTTACAAATCAGGATCAA+AGG + chr3_3:89784021-89784040 None:intergenic 35.0%
GTATGGCCTGATAGAAAAAA+GGG - chr3_3:89784242-89784261 Msa0482610:intron 35.0%
AACAACCAACTACAAACTCA+TGG - chr3_3:89784425-89784444 Msa0482610:intron 35.0%
ATATGCCATGAGTTTGTAGT+TGG + chr3_3:89784433-89784452 None:intergenic 35.0%
! AATCCATGGCTACATTGTTT+TGG + chr3_3:89784542-89784561 None:intergenic 35.0%
! CTATCTGATTGGTAGCTTAT+TGG - chr3_3:89784647-89784666 Msa0482610:intron 35.0%
TCTGAACAAAAAGTCTGCAT+AGG - chr3_3:89784694-89784713 Msa0482610:intron 35.0%
! AAAAGTAGAGGTGGTGTTAA+AGG + chr3_3:89784766-89784785 None:intergenic 35.0%
AGAAAGACATTAGACTTTGG+AGG + chr3_3:89784828-89784847 None:intergenic 35.0%
CTCAGAAAGACATTAGACTT+TGG + chr3_3:89784831-89784850 None:intergenic 35.0%
CTGTCATTGTTGTGTAAAGT+TGG - chr3_3:89785329-89785348 Msa0482610:intron 35.0%
!! ATTTGGTTCCTCTAAAGTGA+GGG - chr3_3:89785414-89785433 Msa0482610:intron 35.0%
AAGCAAGCTATTGAACAAAG+AGG + chr3_3:89785745-89785764 None:intergenic 35.0%
!! AATCTCTTGGCCATTTTAAG+CGG - chr3_3:89785983-89786002 Msa0482610:intron 35.0%
CAATTAAGAGGCTTTCAGTT+CGG - chr3_3:89786298-89786317 Msa0482610:intron 35.0%
AATGGAAAAATACCTGGAAG+TGG - chr3_3:89786414-89786433 Msa0482610:intron 35.0%
AAGAAATCAGATGAGGTGAT+GGG + chr3_3:89786474-89786493 None:intergenic 35.0%
TCATGAGTTTATTTCAGCCT+AGG - chr3_3:89786502-89786521 Msa0482610:intron 35.0%
TTTCTACTGATGTTAAGCCT+AGG + chr3_3:89786522-89786541 None:intergenic 35.0%
! AGTTTTCCTAGACGAGTAAA+CGG + chr3_3:89786575-89786594 None:intergenic 35.0%
ATGTATGAACTTGGCGAAAA+TGG - chr3_3:89786727-89786746 Msa0482610:intron 35.0%
ATTCAGTCATAACTGTTTGC+AGG + chr3_3:89787054-89787073 None:intergenic 35.0%
TGCAAACAGTTATGACTGAA+TGG - chr3_3:89787053-89787072 Msa0482610:intron 35.0%
!!! CATTTTTGAGTTCCGTTCAA+GGG + chr3_3:89787248-89787267 None:intergenic 35.0%
!!! TCATTTTTGAGTTCCGTTCA+AGG + chr3_3:89787249-89787268 None:intergenic 35.0%
TTACAAATCAGGATCAAAGG+TGG + chr3_3:89784018-89784037 None:intergenic 35.0%
AATCTTTCCAACAACTTTGG+AGG + chr3_3:89787538-89787557 None:intergenic 35.0%
AAAGCACAATGCAAAGACTA+AGG + chr3_3:89788145-89788164 None:intergenic 35.0%
! TTACATTTGCTGCATCCAAT+AGG - chr3_3:89788208-89788227 Msa0482610:intron 35.0%
AGAAACCTTCACAAACCTAT+TGG + chr3_3:89788226-89788245 None:intergenic 35.0%
AAAAGACAAGAAATGGAGCA+AGG + chr3_3:89788281-89788300 None:intergenic 35.0%
TGAACTTAAGTGATAGGTTG+AGG + chr3_3:89788455-89788474 None:intergenic 35.0%
TTTGGCATTATTCCTTACCA+AGG + chr3_3:89788587-89788606 None:intergenic 35.0%
! CATTTTATGCAATCTGTGCA+TGG - chr3_3:89788670-89788689 Msa0482610:intron 35.0%
AAGTACCTTTATTGGACTTC+TGG - chr3_3:89788734-89788753 Msa0482610:intron 35.0%
AGAAATTGAATGAACACGTG+AGG - chr3_3:89789018-89789037 Msa0482610:intron 35.0%
GAAATTGAATGAACACGTGA+GGG - chr3_3:89789019-89789038 Msa0482610:intron 35.0%
AGGGTTAATGATAGGTGATT+GGG + chr3_3:89789366-89789385 None:intergenic 35.0%
CGAAGTTCGATTGATGAATA+AGG + chr3_3:89789609-89789628 None:intergenic 35.0%
AGTTTGATGCGATTATTGCT+GGG + chr3_3:89789642-89789661 None:intergenic 35.0%
AAGTTTGATGCGATTATTGC+TGG + chr3_3:89789643-89789662 None:intergenic 35.0%
CTGCAAAATCAGGAAGAAAA+AGG + chr3_3:89789764-89789783 None:intergenic 35.0%
! CTTTTTCTTCCTGATTTTGC+AGG - chr3_3:89789762-89789781 Msa0482610:intron 35.0%
TGTATTGGATATGAAGAGAG+AGG - chr3_3:89789832-89789851 Msa0482610:intron 35.0%
!!! TTGTACGGATCTTTTTTGCT+TGG - chr3_3:89790429-89790448 Msa0482610:intron 35.0%
AATAACCTCGTCGTTATCAA+AGG + chr3_3:89790699-89790718 None:intergenic 35.0%
CTATGCAGCAGTTATGAAAA+AGG + chr3_3:89790753-89790772 None:intergenic 35.0%
CTTAATCATTATGATGCCCT+TGG + chr3_3:89790795-89790814 None:intergenic 35.0%
AAAGGCTTGCACCATATTAA+AGG + chr3_3:89790952-89790971 None:intergenic 35.0%
TTTCCCCTCTAGTTATTTGA+AGG - chr3_3:89791063-89791082 Msa0482610:intron 35.0%
! TAAGTGATGGAAACCATTCA+AGG + chr3_3:89791300-89791319 None:intergenic 35.0%
TAAATGCATAGCCAATCTGA+AGG - chr3_3:89791397-89791416 Msa0482610:intron 35.0%
AAGCTAGCAAACAGTATGAA+AGG - chr3_3:89791436-89791455 Msa0482610:intron 35.0%
! AGGTTTTACCTTTATGGACA+TGG - chr3_3:89791456-89791475 Msa0482610:intron 35.0%
! AATCCTATAGGCTTTATCTG+GGG - chr3_3:89791520-89791539 Msa0482610:intron 35.0%
!! GGAAGGTTGAACTTGTTATA+GGG - chr3_3:89791587-89791606 Msa0482610:five_prime_UTR 35.0%
TCCAGATTGTATGTCAGATA+TGG + chr3_3:89791691-89791710 None:intergenic 35.0%
!!! CTTCAATGGAAGCATTTTGA+TGG + chr3_3:89791908-89791927 None:intergenic 35.0%
CAAAATGCTTCCATTGAAGT+TGG - chr3_3:89791909-89791928 Msa0482610:intron 35.0%
! TTTTGTGGATGATGTGGATA+TGG - chr3_3:89791998-89792017 Msa0482610:intron 35.0%
CAAACATGTTACGAACACAA+GGG + chr3_3:89792085-89792104 None:intergenic 35.0%
CTAAGAAAGGTAAAAGACCA+TGG + chr3_3:89792284-89792303 None:intergenic 35.0%
! AGCCTTTTAGGCTTAAAAAC+AGG - chr3_3:89792333-89792352 Msa0482610:five_prime_UTR 35.0%
!!! GTCCTGTTTTTAAGCCTAAA+AGG + chr3_3:89792338-89792357 None:intergenic 35.0%
GGAGAGTTTATTATAAGGCA+TGG + chr3_3:89793097-89793116 None:intergenic 35.0%
! AGATTTTTCATCCACTCGTA+TGG + chr3_3:89793475-89793494 None:intergenic 35.0%
AAAATCTTGTTCAAGGGCAA+CGG - chr3_3:89793488-89793507 Msa0482610:five_prime_UTR 35.0%
CCGTTTAGCTGATATATTTG+AGG + chr3_3:89793532-89793551 None:intergenic 35.0%
! AGTGGATCCTTTTTCCATAA+TGG - chr3_3:89793569-89793588 Msa0482610:intron 35.0%
CTTACCACCATTATGGAAAA+AGG + chr3_3:89793579-89793598 None:intergenic 35.0%
TGATCTTCTTACCACCATTA+TGG + chr3_3:89793586-89793605 None:intergenic 35.0%
TGGTGGAATAAATCCATTGA+AGG - chr3_3:89793613-89793632 Msa0482610:intron 35.0%
AGAGTGCAGACAAAAGAAAA+AGG - chr3_3:89793969-89793988 Msa0482610:five_prime_UTR 35.0%
GAGTGCAGACAAAAGAAAAA+GGG - chr3_3:89793970-89793989 Msa0482610:five_prime_UTR 35.0%
! ACAAAAGAAAAAGGGTTGGT+CGG - chr3_3:89793978-89793997 Msa0482610:five_prime_UTR 35.0%
!!! CGGTTTTGTTGAGAAAAGAA+AGG - chr3_3:89794123-89794142 Msa0482610:five_prime_UTR 35.0%
!! GCATGTTTTTGCAGAGAAAG+AGG + chr3_3:89781920-89781939 None:intergenic 40.0%
AGAGGAGAATTATTACGGTG+TGG + chr3_3:89782021-89782040 None:intergenic 40.0%
!! TCATAGACCATTGCTGTTTC+AGG + chr3_3:89782729-89782748 None:intergenic 40.0%
CAACACAAGAAACGACACAT+TGG + chr3_3:89783000-89783019 None:intergenic 40.0%
GTGTTGTGCAAGATTTGCAT+CGG - chr3_3:89783014-89783033 Msa0482610:three_prime_UTR 40.0%
GATGGAGAAATGAAGTAAGG+AGG + chr3_3:89783045-89783064 None:intergenic 40.0%
GTAGCTCTTCTGCTATAAGT+GGG + chr3_3:89783243-89783262 None:intergenic 40.0%
AGTAGCTCTTCTGCTATAAG+TGG + chr3_3:89783244-89783263 None:intergenic 40.0%
GTTTACTCATAAACGTTGGC+AGG + chr3_3:89783531-89783550 None:intergenic 40.0%
!! GTTGAACTGTTTTGGGTGAA+AGG + chr3_3:89783660-89783679 None:intergenic 40.0%
TGATGTCTTGCTTATGATGC+AGG - chr3_3:89783815-89783834 Msa0482610:intron 40.0%
GATGTCTTGCTTATGATGCA+GGG - chr3_3:89783816-89783835 Msa0482610:intron 40.0%
AAACAGAAGTCACCCTTGAA+TGG - chr3_3:89783874-89783893 Msa0482610:intron 40.0%
GGTATGGCCTGATAGAAAAA+AGG - chr3_3:89784241-89784260 Msa0482610:intron 40.0%
AGTGGGTGTGTAGAAATCTA+AGG - chr3_3:89784295-89784314 Msa0482610:intron 40.0%
GTGGGTGTGTAGAAATCTAA+GGG - chr3_3:89784296-89784315 Msa0482610:intron 40.0%
AGTTGGTTGTTACACAGAGT+TGG + chr3_3:89784416-89784435 None:intergenic 40.0%
AGACCAAAACAATGTAGCCA+TGG - chr3_3:89784536-89784555 Msa0482610:intron 40.0%
! CAATTGATTTCATGTACGGC+TGG - chr3_3:89784801-89784820 Msa0482610:intron 40.0%
ACCACATTCCCAATTTCTGT+TGG - chr3_3:89785175-89785194 Msa0482610:intron 40.0%
ACCAACAGAAATTGGGAATG+TGG + chr3_3:89785179-89785198 None:intergenic 40.0%
!! CGCACTTTGTTGTTTCTCTA+AGG - chr3_3:89785282-89785301 Msa0482610:intron 40.0%
TAGAGGAACCAAATCCACTT+TGG + chr3_3:89785408-89785427 None:intergenic 40.0%
!! GATTTGGTTCCTCTAAAGTG+AGG - chr3_3:89785413-89785432 Msa0482610:intron 40.0%
CATAAGAAGAGCTCGACAAA+AGG - chr3_3:89785842-89785861 Msa0482610:intron 40.0%
!! ATCACTTGCTGTGAATCTCT+TGG - chr3_3:89785970-89785989 Msa0482610:intron 40.0%
!! GAAGGTACAATAGCGAGTTT+TGG - chr3_3:89786444-89786463 Msa0482610:intron 40.0%
AGAAATCAGATGAGGTGATG+GGG + chr3_3:89786473-89786492 None:intergenic 40.0%
CAAGAAATCAGATGAGGTGA+TGG + chr3_3:89786475-89786494 None:intergenic 40.0%
CATCACCTCATCTGATTTCT+TGG - chr3_3:89786473-89786492 Msa0482610:intron 40.0%
CTTCACCAAGAAATCAGATG+AGG + chr3_3:89786481-89786500 None:intergenic 40.0%
TGATGTCTTGCTTATGATGC+AGG - chr3_3:89783815-89783834 Msa0482610:intron 40.0%
GATGTCTTGCTTATGATGCA+GGG - chr3_3:89783816-89783835 Msa0482610:intron 40.0%
TTACAGAAGTCACCCTTGAA+CGG - chr3_3:89787233-89787252 Msa0482610:intron 40.0%
AGTGGGTGTGTAGAAATCTA+AGG - chr3_3:89784295-89784314 Msa0482610:intron 40.0%
GTGGGTGTGTAGAAATCTAA+GGG - chr3_3:89784296-89784315 Msa0482610:intron 40.0%
!! TTTTGATTGAAGGGCAAGTG+AGG + chr3_3:89788023-89788042 None:intergenic 40.0%
TGCATCCAATAGGTTTGTGA+AGG - chr3_3:89788218-89788237 Msa0482610:intron 40.0%
TTGTGTGCAGGAATCTCAAA+AGG - chr3_3:89788494-89788513 Msa0482610:intron 40.0%
TGTGTGCAGGAATCTCAAAA+GGG - chr3_3:89788495-89788514 Msa0482610:intron 40.0%
GCATTATTCCTTACCAAGGT+TGG + chr3_3:89788583-89788602 None:intergenic 40.0%
ACACACCAGAAGTCCAATAA+AGG + chr3_3:89788742-89788761 None:intergenic 40.0%
TAATGATAGGTGATTGGGCT+TGG + chr3_3:89789361-89789380 None:intergenic 40.0%
GAGGGTTAATGATAGGTGAT+TGG + chr3_3:89789367-89789386 None:intergenic 40.0%
CAAGGTTGAGGGTTAATGAT+AGG + chr3_3:89789374-89789393 None:intergenic 40.0%
GAAATGAGGGAGAGAATACA+AGG + chr3_3:89789392-89789411 None:intergenic 40.0%
TCAGTATCAGGAGGAAATGA+GGG + chr3_3:89789405-89789424 None:intergenic 40.0%
TTCAGTATCAGGAGGAAATG+AGG + chr3_3:89789406-89789425 None:intergenic 40.0%
TAGCGAGAAGAGAAGGAAAA+GGG + chr3_3:89789437-89789456 None:intergenic 40.0%
GTTCGATTGATGAATAAGGC+CGG + chr3_3:89789605-89789624 None:intergenic 40.0%
GAGAGGAGATAAAAGTAGCA+AGG + chr3_3:89789736-89789755 None:intergenic 40.0%
GGAAGAAAAAGGATTCTGAG+AGG + chr3_3:89789753-89789772 None:intergenic 40.0%
TACGTGTTCGGAAACTGAAT+TGG + chr3_3:89790365-89790384 None:intergenic 40.0%
!!! TTTTGCTTGGCTTGTGCTTT+TGG - chr3_3:89790442-89790461 Msa0482610:intron 40.0%
!! AATTGCCTTTGATAACGACG+AGG - chr3_3:89790691-89790710 Msa0482610:intron 40.0%
! TACCTTGTAGGTGTCATAAC+TGG - chr3_3:89790998-89791017 Msa0482610:intron 40.0%
GAAACCATTCAAGGAGAAAC+TGG + chr3_3:89791291-89791310 None:intergenic 40.0%
AAGTCTTGCCATGTCCATAA+AGG + chr3_3:89791467-89791486 None:intergenic 40.0%
!! GGGAAGGTTGAACTTGTTAT+AGG - chr3_3:89791586-89791605 Msa0482610:five_prime_UTR 40.0%
!! GGTTGAACTTGTTATAGGGA+AGG - chr3_3:89791591-89791610 Msa0482610:five_prime_UTR 40.0%
TGTTATAGGGAAGGCTTTAC+AGG - chr3_3:89791600-89791619 Msa0482610:five_prime_UTR 40.0%
GTTATAGGGAAGGCTTTACA+GGG - chr3_3:89791601-89791620 Msa0482610:five_prime_UTR 40.0%
GCCATATCTGACATACAATC+TGG - chr3_3:89791687-89791706 Msa0482610:intron 40.0%
GCTTCCATTGAAGTTGGAAA+TGG - chr3_3:89791915-89791934 Msa0482610:intron 40.0%
GCAAACATGTTACGAACACA+AGG + chr3_3:89792086-89792105 None:intergenic 40.0%
AACTTTGTCTCTCTCTCTCT+TGG - chr3_3:89792120-89792139 Msa0482610:intron 40.0%
AAGGGAAAATTTGGTACCTC+TGG + chr3_3:89792781-89792800 None:intergenic 40.0%
ACGGAAACGACAACCAAATT+TGG + chr3_3:89792817-89792836 None:intergenic 40.0%
TTCACGTTCACACTCTTACT+AGG + chr3_3:89793118-89793137 None:intergenic 40.0%
AAACCAGTTGAAGGACCAAA+CGG - chr3_3:89793361-89793380 Msa0482610:intron 40.0%
! TTTTTCATCCACTCGTATGG+AGG + chr3_3:89793472-89793491 None:intergenic 40.0%
TATATCAGCTAAACGGTTCC+AGG - chr3_3:89793536-89793555 Msa0482610:intron 40.0%
! GGATCCTTTTTCCATAATGG+TGG - chr3_3:89793572-89793591 Msa0482610:intron 40.0%
! GTGGACAATTCTTGATTCGA+CGG + chr3_3:89793640-89793659 None:intergenic 40.0%
AAATTAGCATCAGTGGAAGC+AGG - chr3_3:89793666-89793685 Msa0482610:intron 40.0%
!!! GGGAATGCTGTTTTTGATGT+TGG - chr3_3:89793803-89793822 Msa0482610:intron 40.0%
!!! GCTGTTTTTGATGTTGGTGA+CGG - chr3_3:89793809-89793828 Msa0482610:intron 40.0%
GGCAAAATCAGACTTTCATC+CGG + chr3_3:89793841-89793860 None:intergenic 40.0%
GCAGACAAAAGAAAAAGGGT+TGG - chr3_3:89793974-89793993 Msa0482610:five_prime_UTR 40.0%
GACTGTTCTTCTTCAACAAC+AGG + chr3_3:89794064-89794083 None:intergenic 40.0%
TGTTGAAGAAGAACAGTCGA+CGG - chr3_3:89794066-89794085 Msa0482610:five_prime_UTR 40.0%
! CCTGTTTCTTCTTCAACAAC+AGG + chr3_3:89794098-89794117 None:intergenic 40.0%
CCTGTTGTTGAAGAAGAAAC+AGG - chr3_3:89794095-89794114 Msa0482610:five_prime_UTR 40.0%
TGTTGAAGAAGAAACAGGCA+CGG - chr3_3:89794100-89794119 Msa0482610:five_prime_UTR 40.0%
GTTACTGTTCTCCTCTTTCA+TGG + chr3_3:89794192-89794211 None:intergenic 40.0%
TATTACGGTGTGGCCAATAG+AGG + chr3_3:89782011-89782030 None:intergenic 45.0%
TGCTAGATCTCAACCATCAC+AGG - chr3_3:89782046-89782065 Msa0482610:three_prime_UTR 45.0%
! GTGATAGAGCATCTACTCTG+CGG + chr3_3:89782773-89782792 None:intergenic 45.0%
GAAAGTTCATACCCACATGG+AGG + chr3_3:89783927-89783946 None:intergenic 45.0%
TCGGAAAGTTCATACCCACA+TGG + chr3_3:89783930-89783949 None:intergenic 45.0%
TGTTGGTGTGCTTGTGAACA+TGG + chr3_3:89785383-89785402 None:intergenic 45.0%
! CCAAATCCACTTTGGTGTGT+TGG + chr3_3:89785400-89785419 None:intergenic 45.0%
! CCAACACACCAAAGTGGATT+TGG - chr3_3:89785397-89785416 Msa0482610:intron 45.0%
CATTCAGTCCCTCACTTTAG+AGG + chr3_3:89785425-89785444 None:intergenic 45.0%
!! CTCTAAAGTGAGGGACTGAA+TGG - chr3_3:89785423-89785442 Msa0482610:intron 45.0%
!! GTTGGTGACTGAATCTTGTG+AGG - chr3_3:89785806-89785825 Msa0482610:intron 45.0%
GTTCAAGGGTGACTTCTGTA+AGG + chr3_3:89787234-89787253 None:intergenic 45.0%
GAAAGTTCATACCCACATGG+AGG + chr3_3:89783927-89783946 None:intergenic 45.0%
TCGGAAAGTTCATACCCACA+TGG + chr3_3:89783930-89783949 None:intergenic 45.0%
GGTGTGTAGAAATCTAAGGG+AGG - chr3_3:89784299-89784318 Msa0482610:intron 45.0%
AGACAAGAAATGGAGCAAGG+AGG + chr3_3:89788278-89788297 None:intergenic 45.0%
GGGTGTATTAAGCAGAACGT+TGG - chr3_3:89788515-89788534 Msa0482610:intron 45.0%
TGGAATCAGACAACCAACCT+TGG - chr3_3:89788567-89788586 Msa0482610:intron 45.0%
TCAGACAACCAACCTTGGTA+AGG - chr3_3:89788572-89788591 Msa0482610:intron 45.0%
AATGAACACGTGAGGGATGT+GGG - chr3_3:89789026-89789045 Msa0482610:intron 45.0%
GGGGTGTATGCCTAAAACTA+TGG + chr3_3:89789319-89789338 None:intergenic 45.0%
GGGAGAGAATACAAGGTTGA+GGG + chr3_3:89789385-89789404 None:intergenic 45.0%
AGGGAGAGAATACAAGGTTG+AGG + chr3_3:89789386-89789405 None:intergenic 45.0%
GTAGCGAGAAGAGAAGGAAA+AGG + chr3_3:89789438-89789457 None:intergenic 45.0%
! GGTGGTTGACGGATAAAATC+CGG + chr3_3:89789463-89789482 None:intergenic 45.0%
CCAAACAAGGCTGAGATTGA+CGG + chr3_3:89789484-89789503 None:intergenic 45.0%
! TGGTGTTTTCCGAGCAATTC+CGG - chr3_3:89789583-89789602 Msa0482610:intron 45.0%
TGAATAAGGCCGGAATTGCT+CGG + chr3_3:89789595-89789614 None:intergenic 45.0%
TTCACTGCTCCTGCAAAATC+AGG + chr3_3:89789774-89789793 None:intergenic 45.0%
AACTGCTGCATAGATCTCTG+TGG - chr3_3:89790760-89790779 Msa0482610:intron 45.0%
CTCCAGTTATGACACCTACA+AGG + chr3_3:89791003-89791022 None:intergenic 45.0%
ACTGTACCTGAACCATCAAG+AGG + chr3_3:89791037-89791056 None:intergenic 45.0%
CCTAAAATAGCAACTGCCAG+TGG + chr3_3:89791179-89791198 None:intergenic 45.0%
!!! CCACTGGCAGTTGCTATTTT+AGG - chr3_3:89791176-89791195 Msa0482610:intron 45.0%
CCATTCAAGGAGAAACTGGA+GGG + chr3_3:89791287-89791306 None:intergenic 45.0%
ACCATTCAAGGAGAAACTGG+AGG + chr3_3:89791288-89791307 None:intergenic 45.0%
CTTCCCCAGATAAAGCCTAT+AGG + chr3_3:89791526-89791545 None:intergenic 45.0%
! CTATAGGCTTTATCTGGGGA+AGG - chr3_3:89791524-89791543 Msa0482610:intron 45.0%
GCTTTATCTGGGGAAGGTAA+GGG - chr3_3:89791530-89791549 Msa0482610:intron 45.0%
!!! GAGGCTGGTTTCTTTTGATC+AGG - chr3_3:89792664-89792683 Msa0482610:intron 45.0%
!! GCTGGTTTCTTTTGATCAGG+TGG - chr3_3:89792667-89792686 Msa0482610:intron 45.0%
CTCAAGCTGATTGCACATGT+TGG - chr3_3:89792696-89792715 Msa0482610:intron 45.0%
TGTTAGTGTTGCAAAGCCAG+AGG - chr3_3:89792762-89792781 Msa0482610:intron 45.0%
AACCATTATGGAGGACTTGC+AGG - chr3_3:89793056-89793075 Msa0482610:intron 45.0%
CTCACCTTGGAAGATCAATC+CGG + chr3_3:89793255-89793274 None:intergenic 45.0%
AGCCTGGAAAAATGATGGCA+AGG - chr3_3:89793284-89793303 Msa0482610:intron 45.0%
GCCTGGAAAAATGATGGCAA+GGG - chr3_3:89793285-89793304 Msa0482610:intron 45.0%
CCTGGAAAAATGATGGCAAG+GGG - chr3_3:89793286-89793305 Msa0482610:intron 45.0%
ATGATGGCAAGGGGTTACTT+TGG - chr3_3:89793295-89793314 Msa0482610:intron 45.0%
! GTTACTTTGGCGAATCAAGG+TGG - chr3_3:89793308-89793327 Msa0482610:intron 45.0%
ACTATCTGAGCCATATCGTG+GGG + chr3_3:89793337-89793356 None:intergenic 45.0%
GACTATCTGAGCCATATCGT+GGG + chr3_3:89793338-89793357 None:intergenic 45.0%
ACGATATGGCTCAGATAGTC+CGG - chr3_3:89793338-89793357 Msa0482610:intron 45.0%
ATAGTCCGGAAACCAGTTGA+AGG - chr3_3:89793352-89793371 Msa0482610:intron 45.0%
! TTGGTCCTTCAACTGGTTTC+CGG + chr3_3:89793360-89793379 None:intergenic 45.0%
AGGAAAATCCTCCATACGAG+TGG - chr3_3:89793461-89793480 Msa0482610:five_prime_UTR 45.0%
GGAAAAAGGATCCACTGCTA+TGG + chr3_3:89793565-89793584 None:intergenic 45.0%
! TTGATTCGACGGTCCTTCAA+TGG + chr3_3:89793629-89793648 None:intergenic 45.0%
! GGAAGCAGGCTTTTCTTTTC+CGG - chr3_3:89793680-89793699 Msa0482610:intron 45.0%
! GAAGCAGGCTTTTCTTTTCC+GGG - chr3_3:89793681-89793700 Msa0482610:intron 45.0%
TGATGTGGTCGATAACCTTG+TGG - chr3_3:89793712-89793731 Msa0482610:intron 45.0%
GATGTGGTCGATAACCTTGT+GGG - chr3_3:89793713-89793732 Msa0482610:intron 45.0%
! CATGTGGGCTGAATTGTTTG+AGG + chr3_3:89793751-89793770 None:intergenic 45.0%
CTCAAACAATTCAGCCCACA+TGG - chr3_3:89793749-89793768 Msa0482610:intron 45.0%
GAAGGATCACTACACCATGT+GGG + chr3_3:89793766-89793785 None:intergenic 45.0%
AGAAGGATCACTACACCATG+TGG + chr3_3:89793767-89793786 None:intergenic 45.0%
TTCTCCATCTCGAGCACAAA+GGG - chr3_3:89793783-89793802 Msa0482610:intron 45.0%
!!! TTTTGATGTTGGTGACGGCA+AGG - chr3_3:89793814-89793833 Msa0482610:intron 45.0%
!! TTTGATGTTGGTGACGGCAA+GGG - chr3_3:89793815-89793834 Msa0482610:intron 45.0%
TGAGAAAAGAAAGGCAGCAG+CGG - chr3_3:89794132-89794151 Msa0482610:five_prime_UTR 45.0%
GGCAGATGATACCATGAAAG+AGG - chr3_3:89794178-89794197 Msa0482610:five_prime_UTR 45.0%
!! TTAAATTGAAATTATTTAAT+TGG - chr3_3:89792902-89792921 Msa0482610:intron 5.0%
TGATTCATGGCCACACAGGA+TGG + chr3_3:89781977-89781996 None:intergenic 50.0%
TCCTGTGTGGCCATGAATCA+TGG - chr3_3:89781977-89781996 Msa0482610:three_prime_UTR 50.0%
ACCATGATTCATGGCCACAC+AGG + chr3_3:89781981-89782000 None:intergenic 50.0%
GGTCAGACGACCATGATTCA+TGG + chr3_3:89781990-89782009 None:intergenic 50.0%
CATGGTCGTCTGACCTCTAT+TGG - chr3_3:89781995-89782014 Msa0482610:three_prime_UTR 50.0%
GAGAGAGAGAGAGAGAGAGA+TGG + chr3_3:89783063-89783082 None:intergenic 50.0%
GTCTTGCTTATGATGCAGGG+AGG - chr3_3:89783819-89783838 Msa0482610:intron 50.0%
AGTTCATACCCACATGGAGG+CGG + chr3_3:89783924-89783943 None:intergenic 50.0%
!! TGGGTGTTGATGAAGAGCAC+TGG - chr3_3:89784577-89784596 Msa0482610:CDS 50.0%
AGCACACCAACACACCAAAG+TGG - chr3_3:89785391-89785410 Msa0482610:intron 50.0%
GAAGAGCTCGACAAAAGGTG+TGG - chr3_3:89785847-89785866 Msa0482610:intron 50.0%
! GCTCGACAAAAGGTGTGGTT+TGG - chr3_3:89785852-89785871 Msa0482610:intron 50.0%
CCTTCACAAAAGCCACTTCC+AGG + chr3_3:89786429-89786448 None:intergenic 50.0%
! CCTGGAAGTGGCTTTTGTGA+AGG - chr3_3:89786426-89786445 Msa0482610:intron 50.0%
GCTGATCCGTTTACTCGTCT+AGG - chr3_3:89786566-89786585 Msa0482610:intron 50.0%
CCAAATTGGGAGATGTTGGC+AGG + chr3_3:89786773-89786792 None:intergenic 50.0%
CCTGCCAACATCTCCCAATT+TGG - chr3_3:89786770-89786789 Msa0482610:intron 50.0%
GCTGCCAAATTGGGAGATGT+TGG + chr3_3:89786777-89786796 None:intergenic 50.0%
GTCTTGCTTATGATGCAGGG+AGG - chr3_3:89783819-89783838 Msa0482610:intron 50.0%
AGTTCATACCCACATGGAGG+CGG + chr3_3:89783924-89783943 None:intergenic 50.0%
GAATGAACACGTGAGGGATG+TGG - chr3_3:89789025-89789044 Msa0482610:intron 50.0%
ATGAACACGTGAGGGATGTG+GGG - chr3_3:89789027-89789046 Msa0482610:intron 50.0%
ACCCCGACACTAACCGAAAT+TGG - chr3_3:89789334-89789353 Msa0482610:intron 50.0%
CCCAATTTCGGTTAGTGTCG+GGG + chr3_3:89789338-89789357 None:intergenic 50.0%
CCCCGACACTAACCGAAATT+GGG - chr3_3:89789335-89789354 Msa0482610:intron 50.0%
GCCCAATTTCGGTTAGTGTC+GGG + chr3_3:89789339-89789358 None:intergenic 50.0%
GGCCCAATTTCGGTTAGTGT+CGG + chr3_3:89789340-89789359 None:intergenic 50.0%
GATTGGGCTTGGCCCAATTT+CGG + chr3_3:89789350-89789369 None:intergenic 50.0%
CAGCGTGTTTCAGTATCAGG+AGG + chr3_3:89789414-89789433 None:intergenic 50.0%
! GGTTGACGGATAAAATCCGG+CGG + chr3_3:89789460-89789479 None:intergenic 50.0%
CTGAGATTGACGGTGGTTGA+CGG + chr3_3:89789474-89789493 None:intergenic 50.0%
AACAAGGCTGAGATTGACGG+TGG + chr3_3:89789481-89789500 None:intergenic 50.0%
!! CCGTCAATCTCAGCCTTGTT+TGG - chr3_3:89789481-89789500 Msa0482610:intron 50.0%
AGAGAGGAACCCAGCAATGA+AGG - chr3_3:89789848-89789867 Msa0482610:intron 50.0%
TGCTGCATAGATCTCTGTGG+CGG - chr3_3:89790763-89790782 Msa0482610:intron 50.0%
TCTGTGGCGGCTAAATCCAA+GGG - chr3_3:89790776-89790795 Msa0482610:intron 50.0%
TGAACCATCAAGAGGAGTCG+TGG + chr3_3:89791029-89791048 None:intergenic 50.0%
! ACGACTCCTCTTGATGGTTC+AGG - chr3_3:89791028-89791047 Msa0482610:intron 50.0%
CCCTCCAGTTTCTCCTTGAA+TGG - chr3_3:89791284-89791303 Msa0482610:intron 50.0%
! GGCTTTATCTGGGGAAGGTA+AGG - chr3_3:89791529-89791548 Msa0482610:intron 50.0%
! CAAGAGGGCGTGTGTCTTTA+TGG - chr3_3:89791858-89791877 Msa0482610:intron 50.0%
TCTCGCAAGAGTCTGAGAGA+AGG - chr3_3:89792642-89792661 Msa0482610:intron 50.0%
GACCTGCAAGTCCTCCATAA+TGG + chr3_3:89793061-89793080 None:intergenic 50.0%
GCGATTGTTCTGACGACGAT+TGG - chr3_3:89793143-89793162 Msa0482610:intron 50.0%
ATCTGAGTCTCGTGGAACAG+TGG - chr3_3:89793185-89793204 Msa0482610:intron 50.0%
AACAGTGGTGTGCAAAGCAG+TGG - chr3_3:89793200-89793219 Msa0482610:intron 50.0%
ACAGTGGTGTGCAAAGCAGT+GGG - chr3_3:89793201-89793220 Msa0482610:intron 50.0%
! GCTGTGCATTTTTGCCAAGC+CGG - chr3_3:89793233-89793252 Msa0482610:intron 50.0%
CTTGGAAGATCAATCCGGCT+TGG + chr3_3:89793250-89793269 None:intergenic 50.0%
CAAGCCGGATTGATCTTCCA+AGG - chr3_3:89793248-89793267 Msa0482610:intron 50.0%
GAGCGAGCCTGGAAAAATGA+TGG - chr3_3:89793279-89793298 Msa0482610:intron 50.0%
!! CCCCTTGCCATCATTTTTCC+AGG + chr3_3:89793289-89793308 None:intergenic 50.0%
! GGGGTTACTTTGGCGAATCA+AGG - chr3_3:89793305-89793324 Msa0482610:intron 50.0%
GGACTATCTGAGCCATATCG+TGG + chr3_3:89793339-89793358 None:intergenic 50.0%
TCACCGTTTGGTCCTTCAAC+TGG + chr3_3:89793367-89793386 None:intergenic 50.0%
! GGCTTTTCTTTTCCGGGTTG+AGG - chr3_3:89793687-89793706 Msa0482610:intron 50.0%
! TTCCGGGTTGAGGAATGATG+TGG - chr3_3:89793697-89793716 Msa0482610:intron 50.0%
GACCACATCATTCCTCAACC+CGG + chr3_3:89793702-89793721 None:intergenic 50.0%
CTTTGTGCTCGAGATGGAGA+AGG + chr3_3:89793784-89793803 None:intergenic 50.0%
CTTCTCCATCTCGAGCACAA+AGG - chr3_3:89793782-89793801 Msa0482610:intron 50.0%
CATTCCCTTTGTGCTCGAGA+TGG + chr3_3:89793790-89793809 None:intergenic 50.0%
! TTTTGCCGAACCAGAAGCAG+AGG - chr3_3:89793854-89793873 Msa0482610:intron 50.0%
!! AGGGTTGGTCGGAAAACAGA+AGG - chr3_3:89793989-89794008 Msa0482610:five_prime_UTR 50.0%
ACCTGTTGTTGAGGAGGAAC+AGG - chr3_3:89794026-89794045 Msa0482610:five_prime_UTR 50.0%
CCTGTTGTTGAGGAGGAACA+GGG - chr3_3:89794027-89794046 Msa0482610:five_prime_UTR 50.0%
CTGTTGTTGAGGAGGAACAG+GGG - chr3_3:89794028-89794047 Msa0482610:five_prime_UTR 50.0%
TGAAGAAGAACAGTCGACGG+CGG - chr3_3:89794069-89794088 Msa0482610:five_prime_UTR 50.0%
TGAAGAAGAAACAGGCACGG+CGG - chr3_3:89794103-89794122 Msa0482610:five_prime_UTR 50.0%
TGTGTGTCACGCTGGAAAGA+AGG - chr3_3:89794157-89794176 Msa0482610:five_prime_UTR 50.0%
TTCATGGCCACACAGGATGG+TGG + chr3_3:89781974-89781993 None:intergenic 55.0%
GACGGTTGTGATTTCCGGAG+CGG + chr3_3:89782166-89782185 None:intergenic 55.0%
GGCACGACGGTTGTGATTTC+CGG + chr3_3:89782171-89782190 None:intergenic 55.0%
GGAAATCACAACCGTCGTGC+CGG - chr3_3:89782170-89782189 Msa0482610:three_prime_UTR 55.0%
GAAATCACAACCGTCGTGCC+GGG - chr3_3:89782171-89782190 Msa0482610:three_prime_UTR 55.0%
TGGTGAATTTCCCGGCACGA+CGG + chr3_3:89782184-89782203 None:intergenic 55.0%
GGCAGTGCCTGAAACAGCAA+TGG - chr3_3:89782719-89782738 Msa0482610:three_prime_UTR 55.0%
CTTGCAATCCGCCTCCATGT+GGG - chr3_3:89783913-89783932 Msa0482610:intron 55.0%
CTTGCTTTCCGCCTCCATGT+GGG - chr3_3:89787272-89787291 Msa0482610:intron 55.0%
AGCATCTTCCACTCTGCAGC+TGG - chr3_3:89788547-89788566 Msa0482610:intron 55.0%
GTCTGATTCCAGCTGCAGAG+TGG + chr3_3:89788558-89788577 None:intergenic 55.0%
GGGCAGCGTGTTTCAGTATC+AGG + chr3_3:89789417-89789436 None:intergenic 55.0%
CTCTGTGGCGGCTAAATCCA+AGG - chr3_3:89790775-89790794 Msa0482610:intron 55.0%
! GAGGGCGTGTGTCTTTATGG+AGG - chr3_3:89791861-89791880 Msa0482610:intron 55.0%
GGCGTGTGTCTTTATGGAGG+TGG - chr3_3:89791864-89791883 Msa0482610:intron 55.0%
CGCAAGAGTCTGAGAGAAGG+AGG - chr3_3:89792645-89792664 Msa0482610:intron 55.0%
AGAGTCTGAGAGAAGGAGGC+TGG - chr3_3:89792649-89792668 Msa0482610:intron 55.0%
CGTCGTCAGAACAATCGCTC+TGG + chr3_3:89793141-89793160 None:intergenic 55.0%
!! GAGGAAGCATCTGAGTCTCG+TGG - chr3_3:89793177-89793196 Msa0482610:intron 55.0%
AAGGTGGCAACCCCACGATA+TGG - chr3_3:89793324-89793343 Msa0482610:intron 55.0%
ACCAAACGGTGACTGCTGAC+TGG - chr3_3:89793375-89793394 Msa0482610:intron 55.0%
ACCAGTCAGCAGTCACCGTT+TGG + chr3_3:89793379-89793398 None:intergenic 55.0%
CTTGTTCAAGGGCAACGGCA+CGG - chr3_3:89793493-89793512 Msa0482610:five_prime_UTR 55.0%
TTGTTCAAGGGCAACGGCAC+GGG - chr3_3:89793494-89793513 Msa0482610:intron 55.0%
TCTTTCACGGCCTCTGCTTC+TGG + chr3_3:89793867-89793886 None:intergenic 55.0%
AGCAGAGGCCGTGAAAGATG+CGG - chr3_3:89793869-89793888 Msa0482610:intron 55.0%
GGTCGGAAAACAGAAGGCAG+CGG - chr3_3:89793995-89794014 Msa0482610:five_prime_UTR 55.0%
CCCTGTTCCTCCTCAACAAC+AGG + chr3_3:89794030-89794049 None:intergenic 55.0%
TGTTGAGGAGGAACAGGGGA+CGG - chr3_3:89794032-89794051 Msa0482610:five_prime_UTR 55.0%
!! ACACAGGATGGTGGCGGCTA+GGG + chr3_3:89781965-89781984 None:intergenic 60.0%
! ATGGCCACACAGGATGGTGG+CGG + chr3_3:89781971-89781990 None:intergenic 60.0%
! TTTTACGGCGACCACCGCTC+CGG - chr3_3:89782149-89782168 Msa0482610:three_prime_UTR 60.0%
GGTTGTGATTTCCGGAGCGG+TGG + chr3_3:89782163-89782182 None:intergenic 60.0%
GCGGACAGCGATTAGACGAC+AGG + chr3_3:89782754-89782773 None:intergenic 60.0%
GCTTGCAATCCGCCTCCATG+TGG - chr3_3:89783912-89783931 Msa0482610:intron 60.0%
GCTTGCTTTCCGCCTCCATG+TGG - chr3_3:89787271-89787290 Msa0482610:intron 60.0%
CCTTCTCTTCTCGCTACCGC+CGG - chr3_3:89789441-89789460 Msa0482610:intron 60.0%
GCAGCCACGACTCCTCTTGA+TGG - chr3_3:89791022-89791041 Msa0482610:intron 60.0%
!! ACGACGATTGGAGCGCTGCT+GGG - chr3_3:89793155-89793174 Msa0482610:intron 60.0%
GGCTCGCTCTATGCTCACCT+TGG + chr3_3:89793268-89793287 None:intergenic 60.0%
AGGTGAGCATAGAGCGAGCC+TGG - chr3_3:89793268-89793287 Msa0482610:intron 60.0%
GTTCCAGGCAGCCATAGCAG+TGG - chr3_3:89793551-89793570 Msa0482610:intron 60.0%
GATCCACTGCTATGGCTGCC+TGG + chr3_3:89793557-89793576 None:intergenic 60.0%
GGTTCATGCTCGTGCCCACA+AGG + chr3_3:89793730-89793749 None:intergenic 60.0%
!! ATGTTGGTGACGGCAAGGGC+CGG - chr3_3:89793819-89793838 Msa0482610:intron 60.0%
! CACGGCCTCTGCTTCTGGTT+CGG + chr3_3:89793862-89793881 None:intergenic 60.0%
AGAGGCCGTGAAAGATGCGG+CGG - chr3_3:89793872-89793891 Msa0482610:intron 60.0%
CGGAAAACAGAAGGCAGCGG+CGG - chr3_3:89793998-89794017 Msa0482610:five_prime_UTR 60.0%
AAAACAGAAGGCAGCGGCGG+CGG - chr3_3:89794001-89794020 Msa0482610:five_prime_UTR 60.0%
CAGCGGTTTGTGTGTCACGC+TGG - chr3_3:89794149-89794168 Msa0482610:five_prime_UTR 60.0%
!! CACACAGGATGGTGGCGGCT+AGG + chr3_3:89781966-89781985 None:intergenic 65.0%
CTAGCCGCCACCATCCTGTG+TGG - chr3_3:89781964-89781983 Msa0482610:three_prime_UTR 65.0%
CCGGCGGTAGCGAGAAGAGA+AGG + chr3_3:89789444-89789463 None:intergenic 65.0%
!! GACGACGATTGGAGCGCTGC+TGG - chr3_3:89793154-89793173 Msa0482610:intron 65.0%
!! ACGATTGGAGCGCTGCTGGG+AGG - chr3_3:89793158-89793177 Msa0482610:intron 65.0%
CTCCGCCGCCGCATCTTTCA+CGG + chr3_3:89793880-89793899 None:intergenic 65.0%
GCGGCGACCTGTTGTTGAGG+AGG - chr3_3:89794020-89794039 Msa0482610:five_prime_UTR 65.0%
TGAGGAGGAACAGGGGACGG+CGG - chr3_3:89794035-89794054 Msa0482610:five_prime_UTR 65.0%
GGCCGTGAAAGATGCGGCGG+CGG - chr3_3:89793875-89793894 Msa0482610:intron 70.0%
CGTGAAAGATGCGGCGGCGG+AGG - chr3_3:89793878-89793897 Msa0482610:intron 70.0%
TGCGGCGGCGGAGGATGACA+TGG - chr3_3:89793887-89793906 Msa0482610:intron 70.0%
GCGGCGGAGGATGACATGGC+AGG - chr3_3:89793891-89793910 Msa0482610:intron 70.0%
GCGGCGGCGACCTGTTGTTG+AGG - chr3_3:89794017-89794036 Msa0482610:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 89781897 89794294 89781897 ID=Msa0482610;Name=Msa0482610
chr3_3 mRNA 89781897 89794294 89781897 ID=Msa0482610-mRNA-1;Parent=Msa0482610;Name=Msa0482610-mRNA-1;_AED=0.10;_eAED=0.10;_QI=1006|0.66|0.76|0.84|0.41|0.30|13|1242|69
chr3_3 exon 89781897 89783113 89781897 ID=Msa0482610-mRNA-1:exon:26250;Parent=Msa0482610-mRNA-1
chr3_3 exon 89783408 89783557 89783408 ID=Msa0482610-mRNA-1:exon:26249;Parent=Msa0482610-mRNA-1
chr3_3 exon 89783988 89783995 89783988 ID=Msa0482610-mRNA-1:exon:26248;Parent=Msa0482610-mRNA-1
chr3_3 exon 89784382 89784389 89784382 ID=Msa0482610-mRNA-1:exon:26247;Parent=Msa0482610-mRNA-1
chr3_3 exon 89784537 89784599 89784537 ID=Msa0482610-mRNA-1:exon:26246;Parent=Msa0482610-mRNA-1
chr3_3 exon 89786322 89786407 89786322 ID=Msa0482610-mRNA-1:exon:26245;Parent=Msa0482610-mRNA-1
chr3_3 exon 89787603 89787687 89787603 ID=Msa0482610-mRNA-1:exon:26244;Parent=Msa0482610-mRNA-1
chr3_3 exon 89788898 89788989 89788898 ID=Msa0482610-mRNA-1:exon:26243;Parent=Msa0482610-mRNA-1
chr3_3 exon 89790328 89790396 89790328 ID=Msa0482610-mRNA-1:exon:26242;Parent=Msa0482610-mRNA-1
chr3_3 exon 89791557 89791679 89791557 ID=Msa0482610-mRNA-1:exon:26241;Parent=Msa0482610-mRNA-1
chr3_3 exon 89792257 89792354 89792257 ID=Msa0482610-mRNA-1:exon:26240;Parent=Msa0482610-mRNA-1
chr3_3 exon 89793384 89793512 89793384 ID=Msa0482610-mRNA-1:exon:26239;Parent=Msa0482610-mRNA-1
chr3_3 exon 89793965 89794294 89793965 ID=Msa0482610-mRNA-1:exon:26238;Parent=Msa0482610-mRNA-1
chr3_3 five_prime_UTR 89793965 89794294 89793965 ID=Msa0482610-mRNA-1:five_prime_utr;Parent=Msa0482610-mRNA-1
chr3_3 five_prime_UTR 89793384 89793512 89793384 ID=Msa0482610-mRNA-1:five_prime_utr;Parent=Msa0482610-mRNA-1
chr3_3 five_prime_UTR 89792257 89792354 89792257 ID=Msa0482610-mRNA-1:five_prime_utr;Parent=Msa0482610-mRNA-1
chr3_3 five_prime_UTR 89791557 89791679 89791557 ID=Msa0482610-mRNA-1:five_prime_utr;Parent=Msa0482610-mRNA-1
chr3_3 five_prime_UTR 89790328 89790396 89790328 ID=Msa0482610-mRNA-1:five_prime_utr;Parent=Msa0482610-mRNA-1
chr3_3 five_prime_UTR 89788898 89788989 89788898 ID=Msa0482610-mRNA-1:five_prime_utr;Parent=Msa0482610-mRNA-1
chr3_3 five_prime_UTR 89787603 89787687 89787603 ID=Msa0482610-mRNA-1:five_prime_utr;Parent=Msa0482610-mRNA-1
chr3_3 five_prime_UTR 89786328 89786407 89786328 ID=Msa0482610-mRNA-1:five_prime_utr;Parent=Msa0482610-mRNA-1
chr3_3 CDS 89786322 89786327 89786322 ID=Msa0482610-mRNA-1:cds;Parent=Msa0482610-mRNA-1
chr3_3 CDS 89784537 89784599 89784537 ID=Msa0482610-mRNA-1:cds;Parent=Msa0482610-mRNA-1
chr3_3 CDS 89784382 89784389 89784382 ID=Msa0482610-mRNA-1:cds;Parent=Msa0482610-mRNA-1
chr3_3 CDS 89783988 89783995 89783988 ID=Msa0482610-mRNA-1:cds;Parent=Msa0482610-mRNA-1
chr3_3 CDS 89783433 89783557 89783433 ID=Msa0482610-mRNA-1:cds;Parent=Msa0482610-mRNA-1
chr3_3 three_prime_UTR 89783408 89783432 89783408 ID=Msa0482610-mRNA-1:three_prime_utr;Parent=Msa0482610-mRNA-1
chr3_3 three_prime_UTR 89781897 89783113 89781897 ID=Msa0482610-mRNA-1:three_prime_utr;Parent=Msa0482610-mRNA-1
Gene Sequence

>Msa0482610

ATGAAGGTTGAACTTGTTATAGGGAAGGCTTTACAGGGCAACATTTTGATTTTCTTCCCACATTTTAAGGTTTGCAAGATGAGTACTTTTAATTCTCGCAAGAGTCTGAGAGAAGGAGGCTGGTTTCTTTTGATCAGGTGGTTAAGACTCAAGCTGATTGCACATGTTGGTGTAGTTGATGCTTCAAATGAAGAAAAGTACACTTTTTAG
Protein sequence

>Msa0482610

MKVELVIGKALQGNILIFFPHFKVCKMSTFNSRKSLREGGWFLLIRWLRLKLIAHVGVVDASNEEKYTF*