AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0093800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 184 sgRNAs with CRISPR-Local

Find 701 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGTCCTTCAACTGGTTTC+CGG 0.201883 1_2:+76809023 None:intergenic
GGCACGACGGTTGTGATTTC+CGG 0.212173 1_2:+76820212 None:intergenic
CTTACCACCATTATGGAAAA+AGG 0.217318 1_2:+76808804 None:intergenic
TCATAGACCATTGCTGTTTC+AGG 0.233426 1_2:+76819654 None:intergenic
TCTTTCACGGCCTCTGCTTC+TGG 0.244422 1_2:+76808516 None:intergenic
TGTTATAGGGAAGGCTTTAC+AGG 0.255703 1_2:-76810780 Msa0093800:CDS
TGATCTTCTTACCACCATTA+TGG 0.263611 1_2:+76808797 None:intergenic
GGGAAGGTTGAACTTGTTAT+AGG 0.269970 1_2:-76810794 Msa0093800:intron
AGAGTGCAGACAAAAGAAAA+AGG 0.300366 1_2:-76808411 Msa0093800:three_prime_UTR
AATCCATGGCTACATTGTTT+TGG 0.321201 1_2:+76817841 None:intergenic
TACTAGGAGAGTTTATTATA+AGG 0.331738 1_2:+76809281 None:intergenic
GACGACGATTGGAGCGCTGC+TGG 0.334502 1_2:-76809226 Msa0093800:three_prime_UTR
TTGTCTTATTCATGTTTGTA+AGG 0.341859 1_2:-76808142 Msa0093800:three_prime_UTR
ATAGAAATTACCTTCATTGC+TGG 0.344639 1_2:+76812522 None:intergenic
GGAAGGTTGAACTTGTTATA+GGG 0.349484 1_2:-76810793 Msa0093800:intron
GAACAGAATTAGAAAAGAAT+TGG 0.350315 1_2:-76808442 Msa0093800:three_prime_UTR
GTTACTGTTCTCCTCTTTCA+TGG 0.353231 1_2:+76808191 None:intergenic
ACCTGTTGTTGAGGAGGAAC+AGG 0.353886 1_2:-76808354 Msa0093800:three_prime_UTR
TCACCGTTTGGTCCTTCAAC+TGG 0.368680 1_2:+76809016 None:intergenic
CACGGCCTCTGCTTCTGGTT+CGG 0.369611 1_2:+76808521 None:intergenic
CCTGTTTCTTCTTCAACAAC+AGG 0.378883 1_2:+76808285 None:intergenic
CATGGTCGTCTGACCTCTAT+TGG 0.380973 1_2:-76820385 Msa0093800:five_prime_UTR
CATGATGTTGTTGATTAACT+TGG 0.381017 1_2:+76817868 None:intergenic
GACATATATACAATAATAAT+AGG 0.384374 1_2:-76808119 Msa0093800:three_prime_UTR
GCATTATTCCTTACCAAGGT+TGG 0.393911 1_2:+76813800 None:intergenic
TATATCAGCTAAACGGTTCC+AGG 0.397945 1_2:-76808844 Msa0093800:three_prime_UTR
GACTGTTCTTCTTCAACAAC+AGG 0.399762 1_2:+76808319 None:intergenic
CTCCGCCGCCGCATCTTTCA+CGG 0.402279 1_2:+76808503 None:intergenic
TTGATTCGACGGTCCTTCAA+TGG 0.407153 1_2:+76808754 None:intergenic
CCCTGTTCCTCCTCAACAAC+AGG 0.409818 1_2:+76808353 None:intergenic
ATGTTGAGAAATACTGTTGT+TGG 0.415231 1_2:-76812573 Msa0093800:five_prime_UTR
CACACAGGATGGTGGCGGCT+AGG 0.418682 1_2:+76820417 None:intergenic
TGACAATATGCAGAAACATT+AGG 0.421476 1_2:-76808939 Msa0093800:three_prime_UTR
AAAACAGAAGGCAGCGGCGG+CGG 0.422341 1_2:-76808379 Msa0093800:three_prime_UTR
TTCACGTTCACACTCTTACT+AGG 0.423730 1_2:+76809265 None:intergenic
CTCTTACATTTGCTTTCAAA+AGG 0.425620 1_2:-76817767 Msa0093800:intron
AGCATCTTCCACTCTGCAGC+TGG 0.428640 1_2:-76813833 Msa0093800:five_prime_UTR
TTGTGTGCAGGAATCTCAAA+AGG 0.437894 1_2:-76813886 Msa0093800:intron
GCGATTGTTCTGACGACGAT+TGG 0.439602 1_2:-76809237 Msa0093800:three_prime_UTR
ACACAGGATGGTGGCGGCTA+GGG 0.439620 1_2:+76820418 None:intergenic
TTCTCCATCTCGAGCACAAA+GGG 0.449644 1_2:-76808597 Msa0093800:three_prime_UTR
AGAGAGGAACCCAGCAATGA+AGG 0.452334 1_2:-76812532 Msa0093800:intron
AACTATAGTGGTGAATTTCC+CGG 0.454426 1_2:+76820191 None:intergenic
CGTGAAAGATGCGGCGGCGG+AGG 0.456789 1_2:-76808502 Msa0093800:three_prime_UTR
GGCAAAATCAGACTTTCATC+CGG 0.458365 1_2:+76808542 None:intergenic
TTGTTCAAGGGCAACGGCAC+GGG 0.462682 1_2:-76808886 Msa0093800:three_prime_UTR
AAACAGAAGTCACCCTTGAA+TGG 0.463952 1_2:-76818506 Msa0093800:five_prime_UTR
ATGATGGCAAGGGGTTACTT+TGG 0.465051 1_2:-76809085 Msa0093800:three_prime_UTR
TGCTAGATCTCAACCATCAC+AGG 0.466439 1_2:-76820334 Msa0093800:five_prime_UTR
AGGTGAGCATAGAGCGAGCC+TGG 0.468217 1_2:-76809112 Msa0093800:three_prime_UTR
AAAACAGAGGAGAATTATTA+CGG 0.469830 1_2:+76820357 None:intergenic
TAGAAATTACCTTCATTGCT+GGG 0.469950 1_2:+76812523 None:intergenic
AAGGTGGCAACCCCACGATA+TGG 0.470944 1_2:-76809056 Msa0093800:three_prime_UTR
GAAATCACAACCGTCGTGCC+GGG 0.473897 1_2:-76820209 Msa0093800:five_prime_UTR
ATACTGTTGTTGGATTGTAT+TGG 0.474265 1_2:-76812563 Msa0093800:five_prime_UTR
CCTCAAATATATCAGCTAAA+CGG 0.475136 1_2:-76808851 Msa0093800:three_prime_UTR
GGGGTTACTTTGGCGAATCA+AGG 0.475807 1_2:-76809075 Msa0093800:three_prime_UTR
CCTGTTGTTGAAGAAGAAAC+AGG 0.476095 1_2:-76808285 Msa0093800:three_prime_UTR
GGTAAGAAGATCAAATGATA+TGG 0.476569 1_2:-76808787 Msa0093800:three_prime_UTR
ACCAGTCAGCAGTCACCGTT+TGG 0.478305 1_2:+76809004 None:intergenic
GATCCACTGCTATGGCTGCC+TGG 0.478469 1_2:+76808826 None:intergenic
CCGTTTAGCTGATATATTTG+AGG 0.479945 1_2:+76808851 None:intergenic
ACGATATGGCTCAGATAGTC+CGG 0.480032 1_2:-76809042 Msa0093800:three_prime_UTR
TCTGATCAATTGAAGAATGT+TGG 0.486727 1_2:+76808978 None:intergenic
ACGACGATTGGAGCGCTGCT+GGG 0.493917 1_2:-76809225 Msa0093800:three_prime_UTR
CTTGCTACTTTCAAATGCAT+TGG 0.495927 1_2:-76819682 Msa0093800:five_prime_UTR
TGTATTAGACAAAACTATAG+TGG 0.497843 1_2:+76820179 None:intergenic
GGCCGTGAAAGATGCGGCGG+CGG 0.503912 1_2:-76808505 Msa0093800:three_prime_UTR
GGTCAGACGACCATGATTCA+TGG 0.504433 1_2:+76820393 None:intergenic
GACTATCTGAGCCATATCGT+GGG 0.505106 1_2:+76809045 None:intergenic
GGAAATCACAACCGTCGTGC+CGG 0.505467 1_2:-76820210 Msa0093800:five_prime_UTR
CTATCACAAACTGATTCAAA+TGG 0.507941 1_2:-76819594 Msa0093800:intron
TGTCTTATTCATGTTTGTAA+GGG 0.510817 1_2:-76808141 Msa0093800:three_prime_UTR
GGCTCGCTCTATGCTCACCT+TGG 0.511804 1_2:+76809115 None:intergenic
TGTGTGTCACGCTGGAAAGA+AGG 0.511921 1_2:-76808223 Msa0093800:three_prime_UTR
GTTCAAGGGTGACTTCTGTA+AGG 0.519476 1_2:+76815149 None:intergenic
TGGTGGAATAAATCCATTGA+AGG 0.521855 1_2:-76808767 Msa0093800:three_prime_UTR
CATTTCAAAATTAGCATCAG+TGG 0.526194 1_2:-76808721 Msa0093800:three_prime_UTR
CATTCCCTTTGTGCTCGAGA+TGG 0.526411 1_2:+76808593 None:intergenic
CAGCGGTTTGTGTGTCACGC+TGG 0.529091 1_2:-76808231 Msa0093800:three_prime_UTR
AAATTAGCATCAGTGGAAGC+AGG 0.530727 1_2:-76808714 Msa0093800:three_prime_UTR
GTTGAGTATTTCTATTGTGG+TGG 0.537980 1_2:+76820296 None:intergenic
GGAGAGTTTATTATAAGGCA+TGG 0.540554 1_2:+76809286 None:intergenic
CTTTGTGCTCGAGATGGAGA+AGG 0.541288 1_2:+76808599 None:intergenic
CGCAAGAGTCTGAGAGAAGG+AGG 0.542769 1_2:-76809735 Msa0093800:CDS
CTCAAACAATTCAGCCCACA+TGG 0.543331 1_2:-76808631 Msa0093800:three_prime_UTR
TATTACGGTGTGGCCAATAG+AGG 0.544038 1_2:+76820372 None:intergenic
TCCTGTGTGGCCATGAATCA+TGG 0.544457 1_2:-76820403 Msa0093800:five_prime_UTR
AGAGTCTGAGAGAAGGAGGC+TGG 0.544545 1_2:-76809731 Msa0093800:CDS
CATAAGAAGAGCTCGACAAA+AGG 0.544608 1_2:-76816538 Msa0093800:intron
CTCACCTTGGAAGATCAATC+CGG 0.546651 1_2:+76809128 None:intergenic
CATGTGGGCTGAATTGTTTG+AGG 0.547913 1_2:+76808632 None:intergenic
GGCAGATGATACCATGAAAG+AGG 0.550832 1_2:-76808202 Msa0093800:three_prime_UTR
TTTGATGTTGGTGACGGCAA+GGG 0.554205 1_2:-76808565 Msa0093800:three_prime_UTR
GATTTGATAAATAGCATTGT+GGG 0.554399 1_2:-76817822 Msa0093800:five_prime_UTR
AAGAAGATCAAATGATATGG+TGG 0.555458 1_2:-76808784 Msa0093800:three_prime_UTR
ACCAAACGGTGACTGCTGAC+TGG 0.557184 1_2:-76809005 Msa0093800:three_prime_UTR
GCGGACAGCGATTAGACGAC+AGG 0.558533 1_2:+76819629 None:intergenic
GGTTGAACTTGTTATAGGGA+AGG 0.559000 1_2:-76810789 Msa0093800:CDS
CGTCGTCAGAACAATCGCTC+TGG 0.559566 1_2:+76809242 None:intergenic
GTGGACAATTCTTGATTCGA+CGG 0.560717 1_2:+76808743 None:intergenic
GGACTATCTGAGCCATATCG+TGG 0.563782 1_2:+76809044 None:intergenic
AATGCTATTTATCAAATCCA+TGG 0.567447 1_2:+76817827 None:intergenic
GATGTTGAGTATTTCTATTG+TGG 0.567599 1_2:+76820293 None:intergenic
GCTTGCTTTCCGCCTCCATG+TGG 0.569570 1_2:-76815109 Msa0093800:five_prime_UTR
TGCGGCGGCGGAGGATGACA+TGG 0.569937 1_2:-76808493 Msa0093800:three_prime_UTR
TTTCAAAATATGGCCTGTGA+TGG 0.570361 1_2:+76820321 None:intergenic
CTTGGAAGATCAATCCGGCT+TGG 0.572230 1_2:+76809133 None:intergenic
AAACCAGTTGAAGGACCAAA+CGG 0.575464 1_2:-76809019 Msa0093800:three_prime_UTR
ATGTTGGTGACGGCAAGGGC+CGG 0.577752 1_2:-76808561 Msa0093800:three_prime_UTR
TGTTGAGGAGGAACAGGGGA+CGG 0.579335 1_2:-76808348 Msa0093800:three_prime_UTR
TTACAGAAGTCACCCTTGAA+CGG 0.580359 1_2:-76815147 Msa0093800:five_prime_UTR
ATAGTCCGGAAACCAGTTGA+AGG 0.580735 1_2:-76809028 Msa0093800:three_prime_UTR
GGTTGTGATTTCCGGAGCGG+TGG 0.581760 1_2:+76820220 None:intergenic
TTTATTATAAGGCATGGCAA+AGG 0.583686 1_2:+76809292 None:intergenic
CTTGCTTTCCGCCTCCATGT+GGG 0.584966 1_2:-76815108 Msa0093800:intron
CTTGTTCAAGGGCAACGGCA+CGG 0.585024 1_2:-76808887 Msa0093800:three_prime_UTR
GCGGCGGCGACCTGTTGTTG+AGG 0.587172 1_2:-76808363 Msa0093800:three_prime_UTR
GCGGCGGAGGATGACATGGC+AGG 0.587196 1_2:-76808489 Msa0093800:three_prime_UTR
AGTTCATACCCACATGGAGG+CGG 0.591713 1_2:+76815100 None:intergenic
AGTTCATACCCACATGGAGG+CGG 0.591713 1_2:+76818459 None:intergenic
TGGAATCAGACAACCAACCT+TGG 0.592819 1_2:-76813813 Msa0093800:intron
AAAATCTTGTTCAAGGGCAA+CGG 0.593607 1_2:-76808892 Msa0093800:three_prime_UTR
GGTTCATGCTCGTGCCCACA+AGG 0.595310 1_2:+76808653 None:intergenic
TTCCGGGTTGAGGAATGATG+TGG 0.597028 1_2:-76808683 Msa0093800:three_prime_UTR
CAAGCCGGATTGATCTTCCA+AGG 0.599168 1_2:-76809132 Msa0093800:three_prime_UTR
GTTATAGGGAAGGCTTTACA+GGG 0.599251 1_2:-76810779 Msa0093800:CDS
TGTATTGGATATGAAGAGAG+AGG 0.599342 1_2:-76812548 Msa0093800:five_prime_UTR
GCGGCGACCTGTTGTTGAGG+AGG 0.599549 1_2:-76808360 Msa0093800:three_prime_UTR
ATGGCCACACAGGATGGTGG+CGG 0.604016 1_2:+76820412 None:intergenic
GAGGAAGCATCTGAGTCTCG+TGG 0.606612 1_2:-76809203 Msa0093800:three_prime_UTR
CGGAAAACAGAAGGCAGCGG+CGG 0.608256 1_2:-76808382 Msa0093800:three_prime_UTR
CTTCTCCATCTCGAGCACAA+AGG 0.609176 1_2:-76808598 Msa0093800:three_prime_UTR
GGCAGTGCCTGAAACAGCAA+TGG 0.610775 1_2:-76819661 Msa0093800:five_prime_UTR
AACAGTGGTGTGCAAAGCAG+TGG 0.611554 1_2:-76809180 Msa0093800:three_prime_UTR
GCTTGCAATCCGCCTCCATG+TGG 0.617321 1_2:-76818468 Msa0093800:five_prime_UTR
CCTGTTGTTGAGGAGGAACA+GGG 0.617616 1_2:-76808353 Msa0093800:three_prime_UTR
TCTCGCAAGAGTCTGAGAGA+AGG 0.621181 1_2:-76809738 Msa0093800:CDS
CTCAAGCTGATTGCACATGT+TGG 0.621279 1_2:-76809684 Msa0093800:CDS
TGATTCATGGCCACACAGGA+TGG 0.621624 1_2:+76820406 None:intergenic
AGGGTTGGTCGGAAAACAGA+AGG 0.623203 1_2:-76808391 Msa0093800:three_prime_UTR
TGGGTGTTGATGAAGAGCAC+TGG 0.623576 1_2:-76817803 Msa0093800:five_prime_UTR
AAATGTAAGAGTCTATTGCT+CGG 0.623627 1_2:+76817779 None:intergenic
GGATTTGATAAATAGCATTG+TGG 0.624286 1_2:-76817823 Msa0093800:five_prime_UTR
TGATGTGGTCGATAACCTTG+TGG 0.625176 1_2:-76808668 Msa0093800:three_prime_UTR
AGCAGAGGCCGTGAAAGATG+CGG 0.626576 1_2:-76808511 Msa0093800:three_prime_UTR
TGTTAGTGTTGCAAAGCCAG+AGG 0.627152 1_2:-76809618 Msa0093800:intron
AGGAAAATCCTCCATACGAG+TGG 0.627209 1_2:-76808919 Msa0093800:three_prime_UTR
GGTCGGAAAACAGAAGGCAG+CGG 0.629323 1_2:-76808385 Msa0093800:three_prime_UTR
TGAGAAAAGAAAGGCAGCAG+CGG 0.631176 1_2:-76808248 Msa0093800:three_prime_UTR
ATCTGAGTCTCGTGGAACAG+TGG 0.632990 1_2:-76809195 Msa0093800:three_prime_UTR
TGTGTGCAGGAATCTCAAAA+GGG 0.637356 1_2:-76813885 Msa0093800:intron
ACGATTGGAGCGCTGCTGGG+AGG 0.639799 1_2:-76809222 Msa0093800:three_prime_UTR
CTTGCAATCCGCCTCCATGT+GGG 0.643414 1_2:-76818467 Msa0093800:intron
TGAGGAGGAACAGGGGACGG+CGG 0.647114 1_2:-76808345 Msa0093800:three_prime_UTR
ACCATGATTCATGGCCACAC+AGG 0.647180 1_2:+76820402 None:intergenic
GACGGTTGTGATTTCCGGAG+CGG 0.653507 1_2:+76820217 None:intergenic
GTTCCAGGCAGCCATAGCAG+TGG 0.655061 1_2:-76808829 Msa0093800:three_prime_UTR
GATGTGGTCGATAACCTTGT+GGG 0.657261 1_2:-76808667 Msa0093800:three_prime_UTR
AGAGGCCGTGAAAGATGCGG+CGG 0.658254 1_2:-76808508 Msa0093800:three_prime_UTR
AGACCAAAACAATGTAGCCA+TGG 0.663887 1_2:-76817844 Msa0093800:five_prime_UTR
TTCATGGCCACACAGGATGG+TGG 0.665137 1_2:+76820409 None:intergenic
GGGTGTATTAAGCAGAACGT+TGG 0.667674 1_2:-76813865 Msa0093800:five_prime_UTR
GTCTGATTCCAGCTGCAGAG+TGG 0.668776 1_2:+76813825 None:intergenic
GTTACTTTGGCGAATCAAGG+TGG 0.671819 1_2:-76809072 Msa0093800:three_prime_UTR
GACCACATCATTCCTCAACC+CGG 0.675189 1_2:+76808681 None:intergenic
AGAAGGATCACTACACCATG+TGG 0.675520 1_2:+76808616 None:intergenic
ACTATCTGAGCCATATCGTG+GGG 0.676046 1_2:+76809046 None:intergenic
ACAGTGGTGTGCAAAGCAGT+GGG 0.679285 1_2:-76809179 Msa0093800:three_prime_UTR
CTAGCCGCCACCATCCTGTG+TGG 0.684155 1_2:-76820416 Msa0093800:five_prime_UTR
GAAGGATCACTACACCATGT+GGG 0.690866 1_2:+76808617 None:intergenic
TGGTGAATTTCCCGGCACGA+CGG 0.692724 1_2:+76820199 None:intergenic
AGAGGAGAATTATTACGGTG+TGG 0.692788 1_2:+76820362 None:intergenic
TGAAGAAGAACAGTCGACGG+CGG 0.702492 1_2:-76808311 Msa0093800:three_prime_UTR
TCGGAAAGTTCATACCCACA+TGG 0.703855 1_2:+76818453 None:intergenic
TGTTGAAGAAGAAACAGGCA+CGG 0.705165 1_2:-76808280 Msa0093800:three_prime_UTR
CTGTTGTTGAGGAGGAACAG+GGG 0.707349 1_2:-76808352 Msa0093800:three_prime_UTR
GTTGGTGACTGAATCTTGTG+AGG 0.714213 1_2:-76816574 Msa0093800:five_prime_UTR
TCGGAAAGTTCATACCCACA+TGG 0.716395 1_2:+76815094 None:intergenic
TGTTGAAGAAGAACAGTCGA+CGG 0.719998 1_2:-76808314 Msa0093800:three_prime_UTR
GTGATAGAGCATCTACTCTG+CGG 0.724045 1_2:+76819610 None:intergenic
GAAAGTTCATACCCACATGG+AGG 0.729975 1_2:+76818456 None:intergenic
GAAAGTTCATACCCACATGG+AGG 0.739568 1_2:+76815097 None:intergenic
TGAAGAAGAAACAGGCACGG+CGG 0.751492 1_2:-76808277 Msa0093800:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTTATAAACTTTGAATA+TGG - chr1_2:76809020-76809039 Msa0093800:three_prime_UTR 10.0%
!! AAAATAATCAAGTTAATTAT+AGG - chr1_2:76809975-76809994 Msa0093800:intron 10.0%
!!! TAGGTTTTATTTTTATTATA+TGG - chr1_2:76809994-76810013 Msa0093800:intron 10.0%
!! TTTATGTTATTATAGATAAT+AGG - chr1_2:76811066-76811085 Msa0093800:intron 10.0%
!!! AAAATTATTTTACTAATCAA+AGG - chr1_2:76811765-76811784 Msa0093800:intron 10.0%
!! AAAATAATCAAGTTAATTAT+AGG - chr1_2:76809975-76809994 Msa0093800:intron 10.0%
!!! TAGGTTTTATTTTTATTATA+TGG - chr1_2:76809994-76810013 Msa0093800:intron 10.0%
!!! AAAAGTTGATTATTTTTTAA+GGG + chr1_2:76815368-76815387 None:intergenic 10.0%
!!! TTGAAAAATTAACTTTTTTT+TGG - chr1_2:76815774-76815793 Msa0093800:intron 10.0%
!!! GAAAAAGTATTATTTATAAT+TGG - chr1_2:76816826-76816845 Msa0093800:intron 10.0%
!! GTAATACAATTTATTATTTA+TGG - chr1_2:76817359-76817378 Msa0093800:intron 10.0%
!!! ATAAATACTTTTGTTTTTTA+TGG - chr1_2:76817776-76817795 Msa0093800:five_prime_UTR 10.0%
!!! TAAATACTTTTGTTTTTTAT+GGG - chr1_2:76817777-76817796 Msa0093800:five_prime_UTR 10.0%
!!! TTTTTAATGTTTTTTTTTTG+TGG - chr1_2:76818194-76818213 Msa0093800:intron 10.0%
!! ATTTAAATTAAATATGTATG+TGG + chr1_2:76819099-76819118 None:intergenic 10.0%
!!! AATATAAGATTTCTTTTTGT+TGG - chr1_2:76808512-76808531 Msa0093800:three_prime_UTR 15.0%
!! AATATGTTTAGATTAAATGT+TGG + chr1_2:76808572-76808591 None:intergenic 15.0%
!!! AGATACATTTTTTTTTTTGA+AGG + chr1_2:76809826-76809845 None:intergenic 15.0%
!! TTAGAATACAGTAAATTTAT+TGG + chr1_2:76809941-76809960 None:intergenic 15.0%
!!! TTTTGATACTTAATTTACTA+TGG - chr1_2:76810431-76810450 Msa0093800:intron 15.0%
!!! TGCTTTTTTAATTAACAAAA+AGG - chr1_2:76811098-76811117 Msa0093800:intron 15.0%
!!! ATTTTATTTTGGAGATATAT+TGG - chr1_2:76811415-76811434 Msa0093800:intron 15.0%
!!! GAAATATGAAATTCTTTTTT+TGG - chr1_2:76811848-76811867 Msa0093800:intron 15.0%
!!! AATAACTTTTCAAATTTTCT+TGG + chr1_2:76812261-76812280 None:intergenic 15.0%
!! GTTTAAATTTCACTTTAATT+AGG - chr1_2:76812386-76812405 Msa0093800:intron 15.0%
!! TTTATGACAATAATTTCAAA+TGG - chr1_2:76812607-76812626 Msa0093800:intron 15.0%
!! TTAGAATTCAGTAAATTTAA+TGG + chr1_2:76813306-76813325 None:intergenic 15.0%
!! ATACTTAATTTACTATGATA+TGG - chr1_2:76813783-76813802 Msa0093800:intron 15.0%
!! ATATTAGTTATTATTATTCC+TGG - chr1_2:76814116-76814135 Msa0093800:intron 15.0%
!! AAAATAAAAAAGACAAGAAA+TGG + chr1_2:76814499-76814518 None:intergenic 15.0%
!!! TTTAATGTAGAGATAAATTT+TGG + chr1_2:76814816-76814835 None:intergenic 15.0%
!! GTAAATATAATTCAACAAAA+AGG + chr1_2:76815191-76815210 None:intergenic 15.0%
!!! GGAAAAGTTTATTATTTTTT+GGG + chr1_2:76815315-76815334 None:intergenic 15.0%
!!! TATTATTTTCTGTTTTGAAA+GGG + chr1_2:76815338-76815357 None:intergenic 15.0%
!!! TTATTATTTTCTGTTTTGAA+AGG + chr1_2:76815339-76815358 None:intergenic 15.0%
!!! CAAAAGTTGATTATTTTTTA+AGG + chr1_2:76815369-76815388 None:intergenic 15.0%
!!! CTTAAAAAATAATCAACTTT+TGG - chr1_2:76815367-76815386 Msa0093800:intron 15.0%
!!! ATATTTTGTCAAAAAACTTT+TGG - chr1_2:76815392-76815411 Msa0093800:intron 15.0%
!! AATTAAATGATATAATCTCT+AGG - chr1_2:76815445-76815464 Msa0093800:intron 15.0%
!!! AGTTAATTTTTCAATCTATT+CGG + chr1_2:76815768-76815787 None:intergenic 15.0%
!! TTTAAAAACAAAAAAACTAC+TGG + chr1_2:76816192-76816211 None:intergenic 15.0%
!!! AGTAAAACATATTTGATTTT+GGG - chr1_2:76816222-76816241 Msa0093800:intron 15.0%
!! TACAAAAATAAGAACAAAAT+AGG + chr1_2:76816625-76816644 None:intergenic 15.0%
!!! ATTTTGTTCTTATTTTTGTA+CGG - chr1_2:76816625-76816644 Msa0093800:intron 15.0%
!! AAAAATTGAAATTTAAGTGA+TGG + chr1_2:76817524-76817543 None:intergenic 15.0%
!!! TTTTAACAATTTACTCTTAT+AGG + chr1_2:76817713-76817732 None:intergenic 15.0%
!!! TGTGATTTTTTATTTTGTTA+AGG - chr1_2:76818385-76818404 Msa0093800:intron 15.0%
!!! CATTTTTTTTTATGTATGTA+TGG - chr1_2:76818686-76818705 Msa0093800:intron 15.0%
!! GACATATATACAATAATAAT+AGG - chr1_2:76820472-76820491 Msa0093800:five_prime_UTR 15.0%
!! AAAACACAAAAAATCATGAT+CGG - chr1_2:76808333-76808352 Msa0093800:three_prime_UTR 20.0%
!!! ACCATTTGATTTAATGAAAT+TGG - chr1_2:76808474-76808493 Msa0093800:three_prime_UTR 20.0%
!! ACCAATTTCATTAAATCAAA+TGG + chr1_2:76808478-76808497 None:intergenic 20.0%
!! TCTAAAGATTAGTGAAAAAA+CGG + chr1_2:76809360-76809379 None:intergenic 20.0%
!!! CTTTAGAATAAACTTAAGAA+AGG - chr1_2:76809373-76809392 Msa0093800:intron 20.0%
!! TCATACATGAAATCTATATT+GGG + chr1_2:76809593-76809612 None:intergenic 20.0%
!! TTCATACATGAAATCTATAT+TGG + chr1_2:76809594-76809613 None:intergenic 20.0%
!!! TTTTTTTTTGAAGGAAAAGA+TGG + chr1_2:76809817-76809836 None:intergenic 20.0%
!!! TTTTTTTCCTCTAAATTTGT+TGG - chr1_2:76810394-76810413 Msa0093800:intron 20.0%
!! AATATTTCCAACAAATTTAG+AGG + chr1_2:76810404-76810423 None:intergenic 20.0%
!! ATACTTAATTTACTATGGTA+TGG - chr1_2:76810436-76810455 Msa0093800:intron 20.0%
!! ATCTTTAATGATACTTTAGT+GGG - chr1_2:76810489-76810508 Msa0093800:intron 20.0%
!!! TGGAAATTTAATTTGTGAAT+GGG + chr1_2:76810607-76810626 None:intergenic 20.0%
!!! TTGGAAATTTAATTTGTGAA+TGG + chr1_2:76810608-76810627 None:intergenic 20.0%
!!! ATGATGGAAAATTACTAAAA+AGG + chr1_2:76811189-76811208 None:intergenic 20.0%
!!! AAGCTAAATTTTCAATATGA+TGG + chr1_2:76811205-76811224 None:intergenic 20.0%
!!! GATTATGTCAATAACTTTTT+TGG + chr1_2:76811241-76811260 None:intergenic 20.0%
!!! ATGATTTATTGAATGAGTTT+TGG + chr1_2:76811338-76811357 None:intergenic 20.0%
!! TTATACATAAATGAGTGTTT+GGG + chr1_2:76811366-76811385 None:intergenic 20.0%
!! TTTATACATAAATGAGTGTT+TGG + chr1_2:76811367-76811386 None:intergenic 20.0%
!!! GTTGGTTCAAAATTTTATTT+TGG - chr1_2:76811404-76811423 Msa0093800:intron 20.0%
!! CATATTAGAAAGTAAAATGT+CGG + chr1_2:76811714-76811733 None:intergenic 20.0%
!! TAAAATAAATGTCAAACAGA+AGG + chr1_2:76811985-76812004 None:intergenic 20.0%
!!! TTCTGTTTGACATTTATTTT+AGG - chr1_2:76811984-76812003 Msa0093800:intron 20.0%
!!! TCTATTTCTTGACTTTTATT+TGG - chr1_2:76812090-76812109 Msa0093800:intron 20.0%
!!! CTATTTCTTGACTTTTATTT+GGG - chr1_2:76812091-76812110 Msa0093800:intron 20.0%
!!! TAAGCAATGGATTAAAAAAA+TGG - chr1_2:76812134-76812153 Msa0093800:intron 20.0%
!! AAAAGTTATTGAGGTTTATA+AGG + chr1_2:76812310-76812329 None:intergenic 20.0%
!! AAATCATACAAAAGTTATTG+AGG + chr1_2:76812319-76812338 None:intergenic 20.0%
!!! AAGAAATTAAAGTTTAAAGC+TGG + chr1_2:76812364-76812383 None:intergenic 20.0%
!! TGTCATAAATGAAACAAAAA+CGG + chr1_2:76812596-76812615 None:intergenic 20.0%
!!! ATAAAAAACATGCTTTGTTT+TGG - chr1_2:76812755-76812774 Msa0093800:intron 20.0%
!! TCATACATGAAATCTATATT+GGG + chr1_2:76809593-76809612 None:intergenic 20.0%
!! TTCATACATGAAATCTATAT+TGG + chr1_2:76809594-76809613 None:intergenic 20.0%
!!! AATATAGTTTTCTATTCAAC+AGG + chr1_2:76813021-76813040 None:intergenic 20.0%
!!! CATTGAAACATTTTTGTTAT+AGG - chr1_2:76813144-76813163 Msa0093800:intron 20.0%
!! ATCTTAAATGATACTTTAGT+GGG - chr1_2:76813827-76813846 Msa0093800:five_prime_UTR 20.0%
!!! ATTGCAATAAATTTTGATTG+AGG + chr1_2:76814072-76814091 None:intergenic 20.0%
!!! TGAAAATAGTTTTGATTGAA+GGG + chr1_2:76814243-76814262 None:intergenic 20.0%
!! AATGTTGAAAAATAGTTAGA+TGG + chr1_2:76814317-76814336 None:intergenic 20.0%
!! CTTTCTTAAGTTTATTCTAA+AGG + chr1_2:76809375-76809394 None:intergenic 20.0%
!! TTAGAATAAACTTAAGAAAG+AGG - chr1_2:76809375-76809394 Msa0093800:intron 20.0%
!! TATGAAAGAGTTATTGATAT+TGG - chr1_2:76814585-76814604 Msa0093800:intron 20.0%
!! CTCTACATTAAAAAGTTTAA+TGG - chr1_2:76814824-76814843 Msa0093800:intron 20.0%
!! TCATTACCTTGATTATTAAT+TGG - chr1_2:76814911-76814930 Msa0093800:intron 20.0%
!!! CATTTTTTAATATAACTTGC+TGG - chr1_2:76815059-76815078 Msa0093800:intron 20.0%
!!! AGTTTATTATTTTTTGGGAT+TGG + chr1_2:76815310-76815329 None:intergenic 20.0%
!!! GGGAAAAGTTTATTATTTTT+TGG + chr1_2:76815316-76815335 None:intergenic 20.0%
!!! ATTATTTTCTGTTTTGAAAG+GGG + chr1_2:76815337-76815356 None:intergenic 20.0%
!!! GTTAATTTTTCAATCTATTC+GGG + chr1_2:76815767-76815786 None:intergenic 20.0%
!!! ACTTTTATTTCACTTATTGT+TGG - chr1_2:76815901-76815920 Msa0093800:intron 20.0%
!! AAGTATTTAGTAAGAAATTC+AGG - chr1_2:76816109-76816128 Msa0093800:intron 20.0%
!! AGTATTTAGTAAGAAATTCA+GGG - chr1_2:76816110-76816129 Msa0093800:intron 20.0%
!!! GAGTAAAACATATTTGATTT+TGG - chr1_2:76816221-76816240 Msa0093800:intron 20.0%
!!! CTCTTTTTGCAATTTAAATT+TGG - chr1_2:76816395-76816414 Msa0093800:intron 20.0%
!!! CAATACATAGTTTTCATTAA+TGG - chr1_2:76816431-76816450 Msa0093800:intron 20.0%
!! AGAAAATAAAAATAAGTGTC+TGG + chr1_2:76816548-76816567 None:intergenic 20.0%
!! ATTACAAAAAAATACGTGTT+CGG + chr1_2:76816588-76816607 None:intergenic 20.0%
!!! TTTTTGAATGCTAAATTTAG+AGG - chr1_2:76816801-76816820 Msa0093800:intron 20.0%
!! TCATTTCATCAATTGAATTT+GGG - chr1_2:76817043-76817062 Msa0093800:intron 20.0%
!! AGTTATTTGAAGGAAATTAT+TGG - chr1_2:76817284-76817303 Msa0093800:intron 20.0%
!! TTTCTTTCCAAAATATTTAC+TGG + chr1_2:76817456-76817475 None:intergenic 20.0%
!! GTTGAAAGATAATTTATGAA+AGG - chr1_2:76817572-76817591 Msa0093800:intron 20.0%
!! GTAAATTGTTAAAATCCTAT+AGG - chr1_2:76817719-76817738 Msa0093800:intron 20.0%
!! AGCAAATATAGTTTGAAAAA+AGG + chr1_2:76817925-76817944 None:intergenic 20.0%
!!! TTTGTATAACTTTTTAGCTA+AGG + chr1_2:76817949-76817968 None:intergenic 20.0%
!!! ATTGTCTTTTGTTAAACATT+TGG - chr1_2:76817987-76818006 Msa0093800:intron 20.0%
!! TAATTCTTGTAAATTTCAGT+TGG - chr1_2:76818264-76818283 Msa0093800:intron 20.0%
!! CATGGATATCTAAAAAAAAA+TGG + chr1_2:76818477-76818496 None:intergenic 20.0%
!!! CATTTTTTTTTAGATATCCA+TGG - chr1_2:76818475-76818494 Msa0093800:five_prime_UTR 20.0%
!!! TACTTTTAAAAAGCTAAGAA+AGG + chr1_2:76818508-76818527 None:intergenic 20.0%
!!! TTTAAGTAGAAATCGTTTTT+TGG - chr1_2:76818605-76818624 Msa0093800:intron 20.0%
!! GAAAAATGTAAAGACAAAAT+TGG - chr1_2:76818635-76818654 Msa0093800:intron 20.0%
!! ATAAACATGATTAACCATTA+TGG - chr1_2:76819255-76819274 Msa0093800:intron 20.0%
! AAAACAGAGGAGAATTATTA+CGG + chr1_2:76808237-76808256 None:intergenic 25.0%
!!! GATTTTTTGTGTTTTTGTAG+AGG + chr1_2:76808328-76808347 None:intergenic 25.0%
! TGTATTAGACAAAACTATAG+TGG + chr1_2:76808415-76808434 None:intergenic 25.0%
! TGGATTACTTGATTATGATT+TGG - chr1_2:76809040-76809059 Msa0093800:three_prime_UTR 25.0%
!!! TGATTATGATTTGGTGATTT+AGG - chr1_2:76809049-76809068 Msa0093800:three_prime_UTR 25.0%
!!! GATTATGATTTGGTGATTTA+GGG - chr1_2:76809050-76809069 Msa0093800:three_prime_UTR 25.0%
!! TTATTTTCACTGAATCATAC+AGG + chr1_2:76809136-76809155 None:intergenic 25.0%
! ATAGATTTCATGTATGAACT+TGG - chr1_2:76809596-76809615 Msa0093800:intron 25.0%
!! TCTATTCAAATGATAATGCA+GGG + chr1_2:76809644-76809663 None:intergenic 25.0%
!! TTCTATTCAAATGATAATGC+AGG + chr1_2:76809645-76809664 None:intergenic 25.0%
!!! GGAAAAAAATTAACTTGTGT+TGG + chr1_2:76810383-76810402 None:intergenic 25.0%
!!! TTTAAACCCTTTTTTCTATC+AGG + chr1_2:76810462-76810481 None:intergenic 25.0%
! AGAAAAAAGGGTTTAAAGAA+AGG - chr1_2:76810465-76810484 Msa0093800:intron 25.0%
! CATCTTTAATGATACTTTAG+TGG - chr1_2:76810488-76810507 Msa0093800:intron 25.0%
! AAATCTAAGGGAATAAAGAA+AGG - chr1_2:76810519-76810538 Msa0093800:intron 25.0%
!! AATGCTATTTATCAAATCCA+TGG + chr1_2:76810767-76810786 None:intergenic 25.0%
! GATTTGATAAATAGCATTGT+GGG - chr1_2:76810769-76810788 Msa0093800:CDS 25.0%
! TATTACAATCACTATCTGAT+TGG - chr1_2:76810847-76810866 Msa0093800:intron 25.0%
! TGATCATATATGAAAAGTAG+AGG + chr1_2:76810989-76811008 None:intergenic 25.0%
!! AGATCAATTGATTTCATGTA+CGG - chr1_2:76811008-76811027 Msa0093800:intron 25.0%
!! ATTTTGAACCAACAGAAATT+GGG + chr1_2:76811397-76811416 None:intergenic 25.0%
!! AATTTTGAACCAACAGAAAT+TGG + chr1_2:76811398-76811417 None:intergenic 25.0%
!! AGATATATTGGACTTTTTGT+TGG - chr1_2:76811427-76811446 Msa0093800:intron 25.0%
! ATCTAAGCTTCTAAATATGT+TGG - chr1_2:76811461-76811480 Msa0093800:intron 25.0%
! AACAATTACACAAAGTCTTA+GGG + chr1_2:76811519-76811538 None:intergenic 25.0%
! GCATATTAGAAGATAAAATG+TGG - chr1_2:76811658-76811677 Msa0093800:intron 25.0%
!!! AATTTTTTGCGTTTCTTCAA+AGG + chr1_2:76811751-76811770 None:intergenic 25.0%
! AGTAAATACGAACATTTGAA+AGG + chr1_2:76811892-76811911 None:intergenic 25.0%
! AAATGTTCGTATTTACTAAG+AGG - chr1_2:76811895-76811914 Msa0093800:intron 25.0%
!! ATTTTAGGCTATGAATAAGT+TGG - chr1_2:76811999-76812018 Msa0093800:intron 25.0%
! TCCATTGCTTAATTACTAAA+AGG + chr1_2:76812125-76812144 None:intergenic 25.0%
! ATTTAAAGAAGTTAACTCGA+TGG + chr1_2:76812237-76812256 None:intergenic 25.0%
! AGACAATAAAAGTGAACAAA+AGG + chr1_2:76812454-76812473 None:intergenic 25.0%
!! GTAGAACTTTTTGTTGATAT+TGG - chr1_2:76812531-76812550 Msa0093800:intron 25.0%
! GTCATAAATGAAACAAAAAC+GGG + chr1_2:76812595-76812614 None:intergenic 25.0%
! ATTTCAAATGGAAAAATACC+TGG - chr1_2:76812619-76812638 Msa0093800:intron 25.0%
! ATAGATTTCATGTATGAACT+TGG - chr1_2:76809596-76809615 Msa0093800:intron 25.0%
! TACAGTTTACTCATAAATGT+TGG + chr1_2:76813111-76813130 None:intergenic 25.0%
!! GAATACAGTTGAATTGTTTT+TGG + chr1_2:76813243-76813262 None:intergenic 25.0%
! TACTTGTGTAATCATCTTAA+TGG + chr1_2:76813561-76813580 None:intergenic 25.0%
! AAAAATCTTTCCAACAACTT+TGG + chr1_2:76813752-76813771 None:intergenic 25.0%
!!! ATGTCTCTCTTTTTTCTATT+AGG + chr1_2:76813809-76813828 None:intergenic 25.0%
! CATCTTAAATGATACTTTAG+TGG - chr1_2:76813826-76813845 Msa0093800:five_prime_UTR 25.0%
!! TATTCCTGGAGTATTATAAT+AGG - chr1_2:76814130-76814149 Msa0093800:intron 25.0%
! AAAAGAATTCGTAACTAACA+AGG + chr1_2:76814211-76814230 None:intergenic 25.0%
!!! CTGAAAATAGTTTTGATTGA+AGG + chr1_2:76814244-76814263 None:intergenic 25.0%
!!! AGTTAGATGGCTTTTAAAAT+GGG + chr1_2:76814304-76814323 None:intergenic 25.0%
!!! TAGTTAGATGGCTTTTAAAA+TGG + chr1_2:76814305-76814324 None:intergenic 25.0%
!! TTCTAAAGGTTAGTGAAAAA+TGG + chr1_2:76814541-76814560 None:intergenic 25.0%
! TAAACTAAATTATTGTGTGC+AGG - chr1_2:76814693-76814712 Msa0093800:intron 25.0%
! CATGTTCCAATTAATAATCA+AGG + chr1_2:76814920-76814939 None:intergenic 25.0%
!!! ATGCTTTTAAGTACCTTTAT+TGG - chr1_2:76814937-76814956 Msa0093800:intron 25.0%
! GTTGAATTATATTTACACCT+TGG - chr1_2:76815195-76815214 Msa0093800:intron 25.0%
!!! TTATTTTCTGTTTTGAAAGG+GGG + chr1_2:76815336-76815355 None:intergenic 25.0%
!! AATATACACACCATAGTTTT+AGG - chr1_2:76815517-76815536 Msa0093800:intron 25.0%
! TTATGAAAACTCATTCAAAC+AGG + chr1_2:76816248-76816267 None:intergenic 25.0%
!!! GAACACGTATTTTTTTGTAA+TGG - chr1_2:76816587-76816606 Msa0093800:five_prime_UTR 25.0%
!! GATAAGCACTTTAGTTTATT+TGG + chr1_2:76816712-76816731 None:intergenic 25.0%
!!! ATCAGCTTTGTATTTGTTTT+TGG - chr1_2:76816776-76816795 Msa0093800:intron 25.0%
!! TCTATTTTCTTTAAGTGCTT+AGG + chr1_2:76816854-76816873 None:intergenic 25.0%
! TGAAAAAGGAATACTAGAAA+GGG + chr1_2:76816950-76816969 None:intergenic 25.0%
! ATGAAAAAGGAATACTAGAA+AGG + chr1_2:76816951-76816970 None:intergenic 25.0%
! CTCATTTCATCAATTGAATT+TGG - chr1_2:76817042-76817061 Msa0093800:intron 25.0%
!!! AGCATTTTGGTTTTCTATAT+TGG - chr1_2:76817106-76817125 Msa0093800:intron 25.0%
! ATTTCATAGTGCCTTTAATA+TGG - chr1_2:76817149-76817168 Msa0093800:intron 25.0%
! TGATAAGTTTAATACCTTGT+AGG - chr1_2:76817197-76817216 Msa0093800:intron 25.0%
! ATTTCCTTCAAATAACTAGA+GGG + chr1_2:76817281-76817300 None:intergenic 25.0%
! AATTTCCTTCAAATAACTAG+AGG + chr1_2:76817282-76817301 None:intergenic 25.0%
!! TATCACTCAAATATTTTCAC+TGG + chr1_2:76817336-76817355 None:intergenic 25.0%
! ATTATTTATGGAATAACCAC+TGG - chr1_2:76817371-76817390 Msa0093800:intron 25.0%
!!! TGATTATTTTTCCTTCAGAT+TGG + chr1_2:76817622-76817641 None:intergenic 25.0%
!! TATGAAAGGTTTTACCTTTA+TGG - chr1_2:76817661-76817680 Msa0093800:intron 25.0%
!!! TACTTTTGTTTTTTATGGGA+AGG - chr1_2:76817781-76817800 Msa0093800:five_prime_UTR 25.0%
! CAGAAAAAACCTTAAAATGT+GGG + chr1_2:76817856-76817875 None:intergenic 25.0%
! TGAAGACAAATAGTAACATA+AGG - chr1_2:76818035-76818054 Msa0093800:intron 25.0%
!!! TTTTTTTTTTGTGGATGATG+TGG - chr1_2:76818203-76818222 Msa0093800:intron 25.0%
! AAAAGGCTTGAAATGAAAAA+TGG + chr1_2:76818532-76818551 None:intergenic 25.0%
!! TTTTTCATTTCAAGCCTTTT+AGG - chr1_2:76818532-76818551 Msa0093800:five_prime_UTR 25.0%
! TACTTAAATCATGTACAACT+TGG + chr1_2:76818593-76818612 None:intergenic 25.0%
!!! TTAATACATTGTTTTGCCTT+TGG - chr1_2:76818759-76818778 Msa0093800:intron 25.0%
! AGAAATAAACTCAAAGTGAA+GGG + chr1_2:76818816-76818835 None:intergenic 25.0%
!! GTTCAAAAGTTTTCAAATGA+TGG - chr1_2:76819197-76819216 Msa0093800:intron 25.0%
!! AAGTTTTCAAATGATGGTTA+TGG - chr1_2:76819203-76819222 Msa0093800:intron 25.0%
! TACTAGGAGAGTTTATTATA+AGG + chr1_2:76819313-76819332 None:intergenic 25.0%
! GAACAGAATTAGAAAAGAAT+TGG - chr1_2:76820149-76820168 Msa0093800:intron 25.0%
!! TTGTCTTATTCATGTTTGTA+AGG - chr1_2:76820449-76820468 Msa0093800:five_prime_UTR 25.0%
!! TGTCTTATTCATGTTTGTAA+GGG - chr1_2:76820450-76820469 Msa0093800:five_prime_UTR 25.0%
!! TGTGGTGGTTTTTCAAAATA+TGG + chr1_2:76808283-76808302 None:intergenic 30.0%
! GATGTTGAGTATTTCTATTG+TGG + chr1_2:76808301-76808320 None:intergenic 30.0%
! ATCATGATCGGATCATTTTA+CGG - chr1_2:76808345-76808364 Msa0093800:three_prime_UTR 30.0%
GAGAAATAACAATCTATGAC+AGG - chr1_2:76808780-76808799 Msa0093800:three_prime_UTR 30.0%
CAGTGCATGAAATAAAAATG+TGG + chr1_2:76808838-76808857 None:intergenic 30.0%
! CTATCACAAACTGATTCAAA+TGG - chr1_2:76808997-76809016 Msa0093800:three_prime_UTR 30.0%
AAGATTATAGCATGCAAAGT+TGG + chr1_2:76809093-76809112 None:intergenic 30.0%
ACTTTGCATGCTATAATCTT+AGG - chr1_2:76809093-76809112 Msa0093800:three_prime_UTR 30.0%
!! AAAAACGGACAATGTTTTTG+AGG + chr1_2:76809345-76809364 None:intergenic 30.0%
AGCTTCTATATGTTTCAATG+TGG - chr1_2:76809516-76809535 Msa0093800:intron 30.0%
ATGTATGAACTTGGCTAAAA+TGG - chr1_2:76809605-76809624 Msa0093800:intron 30.0%
!! CGTTGAGACATTTTTGTTAT+AGG - chr1_2:76809779-76809798 Msa0093800:intron 30.0%
! GAATACAGTTGAACTGTTTT+GGG + chr1_2:76809878-76809897 None:intergenic 30.0%
!!! CATTTTTGAGTTCCATTCAA+GGG + chr1_2:76810100-76810119 None:intergenic 30.0%
!!! TCATTTTTGAGTTCCATTCA+AGG + chr1_2:76810101-76810120 None:intergenic 30.0%
TACTTGTGTAGTCATCTTAA+TGG + chr1_2:76810202-76810221 None:intergenic 30.0%
! TTCTTACTAGCTTACAAATC+AGG + chr1_2:76810240-76810259 None:intergenic 30.0%
!! AATTTTTCAGCTGTAAGCTA+TGG - chr1_2:76810564-76810583 Msa0093800:intron 30.0%
! CATGATGTTGTTGATTAACT+TGG + chr1_2:76810726-76810745 None:intergenic 30.0%
GGATTTGATAAATAGCATTG+TGG - chr1_2:76810768-76810787 Msa0093800:CDS 30.0%
AAATGTAAGAGTCTATTGCT+CGG + chr1_2:76810815-76810834 None:intergenic 30.0%
CTCTTACATTTGCTTTCAAA+AGG - chr1_2:76810824-76810843 Msa0093800:intron 30.0%
! CAGACTTTTTGTTCAGATTT+AGG + chr1_2:76810902-76810921 None:intergenic 30.0%
TCATATATGAAAAGTAGAGG+TGG + chr1_2:76810986-76811005 None:intergenic 30.0%
CAACTAAAGTGCATAATCTA+AGG + chr1_2:76811287-76811306 None:intergenic 30.0%
CAACAATTACACAAAGTCTT+AGG + chr1_2:76811520-76811539 None:intergenic 30.0%
TAGAGTTCACGTTAGATATT+GGG + chr1_2:76811805-76811824 None:intergenic 30.0%
TTAGAGTTCACGTTAGATAT+TGG + chr1_2:76811806-76811825 None:intergenic 30.0%
!!! TTCTTTTTTTGGTGATAGAG+TGG - chr1_2:76811859-76811878 Msa0093800:intron 30.0%
TACGAACATTTGAAAGGTAA+CGG + chr1_2:76811886-76811905 None:intergenic 30.0%
!! TTTCTTGACTTTTATTTGGG+TGG - chr1_2:76812094-76812113 Msa0093800:intron 30.0%
! GCCTTTTAGTAATTAAGCAA+TGG - chr1_2:76812121-76812140 Msa0093800:intron 30.0%
AGAAAGAAAACCGCTTAAAA+TGG + chr1_2:76812207-76812226 None:intergenic 30.0%
CACTTTAATTAGGACATTCA+CGG - chr1_2:76812396-76812415 Msa0093800:intron 30.0%
AAGGACAACATATTGTATGT+TGG + chr1_2:76812435-76812454 None:intergenic 30.0%
CATACGATAATGCAATTAAG+AGG - chr1_2:76812497-76812516 Msa0093800:intron 30.0%
AGCTACTATATGTTTGAATG+TGG - chr1_2:76812849-76812868 Msa0093800:intron 30.0%
AAAACTAAAGCTGCCAAATT+GGG + chr1_2:76812997-76813016 None:intergenic 30.0%
TAAAACTAAAGCTGCCAAAT+TGG + chr1_2:76812998-76813017 None:intergenic 30.0%
!! TCCATCTTTTCCTTCTAAAA+AGG - chr1_2:76813178-76813197 Msa0093800:intron 30.0%
!! TCCTTTTTAGAAGGAAAAGA+TGG + chr1_2:76813182-76813201 None:intergenic 30.0%
! TTGAGCATTTCCTTTTTAGA+AGG + chr1_2:76813191-76813210 None:intergenic 30.0%
!!! GTTGAATTGTTTTTGGTGAA+AGG + chr1_2:76813236-76813255 None:intergenic 30.0%
CAAACACAAATGAAGGTTAT+CGG + chr1_2:76813519-76813538 None:intergenic 30.0%
AGTACAACAAACACAAATGA+AGG + chr1_2:76813526-76813545 None:intergenic 30.0%
TACTTACAAATCAGGATCAA+AGG + chr1_2:76813591-76813610 None:intergenic 30.0%
ACAGTTCTTACTTACAAATC+AGG + chr1_2:76813599-76813618 None:intergenic 30.0%
!!! TTTTTTTCCTCCAAAGTTGT+TGG - chr1_2:76813739-76813758 Msa0093800:intron 30.0%
CAAACTATGACACAAGTTAT+TGG - chr1_2:76813907-76813926 Msa0093800:intron 30.0%
TTCTCAATCAGAGTAATTAC+AGG - chr1_2:76813994-76814013 Msa0093800:intron 30.0%
AGTTCCTATTATAATACTCC+AGG + chr1_2:76814137-76814156 None:intergenic 30.0%
AACTAACAAGGAAAAGACTA+AGG + chr1_2:76814199-76814218 None:intergenic 30.0%
AGTAGAAATTTAACTGCACA+TGG - chr1_2:76814636-76814655 Msa0093800:intron 30.0%
TAACAGTGAACTTAAGTGAT+AGG + chr1_2:76814672-76814691 None:intergenic 30.0%
CAGATTGCATAAAATGCATA+AGG + chr1_2:76814877-76814896 None:intergenic 30.0%
!! TTTAATATAACTTGCTGGTG+TGG - chr1_2:76815064-76815083 Msa0093800:intron 30.0%
!! TTAATATAACTTGCTGGTGT+GGG - chr1_2:76815065-76815084 Msa0093800:intron 30.0%
ATTTCTATGGAATATGTCCA+AGG + chr1_2:76815215-76815234 None:intergenic 30.0%
ACGTGTTCATTCAATTTCTA+TGG + chr1_2:76815228-76815247 None:intergenic 30.0%
GAATTTGCAGTTTGTGTATT+TGG - chr1_2:76815260-76815279 Msa0093800:intron 30.0%
!! AACTTTTGGAGATATGTTTC+AGG - chr1_2:76815406-76815425 Msa0093800:intron 30.0%
!!! TAGGTTTTTTTTGCCAAACA+AGG + chr1_2:76815708-76815727 None:intergenic 30.0%
TTGAAGAGAAGAAGAAAAGT+AGG + chr1_2:76815727-76815746 None:intergenic 30.0%
TTCGGGTATAAAGATAGAAA+AGG + chr1_2:76815750-76815769 None:intergenic 30.0%
ATGTTGAGAAATACTGTTGT+TGG - chr1_2:76816018-76816037 Msa0093800:intron 30.0%
ATACTGTTGTTGGATTGTAT+TGG - chr1_2:76816028-76816047 Msa0093800:intron 30.0%
TAGAAATTACCTTCATTGCT+GGG + chr1_2:76816071-76816090 None:intergenic 30.0%
ATAGAAATTACCTTCATTGC+TGG + chr1_2:76816072-76816091 None:intergenic 30.0%
CTTAAACTAACTTGAATGCA+AGG - chr1_2:76816487-76816506 Msa0093800:intron 30.0%
GAAAAAGGAATACTAGAAAG+GGG + chr1_2:76816949-76816968 None:intergenic 30.0%
! ATCCACATTTCTAAGCATTT+TGG - chr1_2:76817093-76817112 Msa0093800:intron 30.0%
AACCAAAATGCTTAGAAATG+TGG + chr1_2:76817098-76817117 None:intergenic 30.0%
ATCATTCTCACTTTCAACAA+AGG + chr1_2:76817181-76817200 None:intergenic 30.0%
TTTCCTTCAAATAACTAGAG+GGG + chr1_2:76817280-76817299 None:intergenic 30.0%
TATATGCGTACATGTTACAA+AGG - chr1_2:76817430-76817449 Msa0093800:intron 30.0%
! ACAAAGGCCAGTAAATATTT+TGG - chr1_2:76817446-76817465 Msa0093800:intron 30.0%
ACATCATGTCTACATAAACT+TGG + chr1_2:76817554-76817573 None:intergenic 30.0%
! AAAATCCTATAGGCTTTATC+TGG - chr1_2:76817729-76817748 Msa0093800:intron 30.0%
! AAATCCTATAGGCTTTATCT+GGG - chr1_2:76817730-76817749 Msa0093800:intron 30.0%
! GATTTTCTTCCCACATTTTA+AGG - chr1_2:76817844-76817863 Msa0093800:five_prime_UTR 30.0%
GCAGAAAAAACCTTAAAATG+TGG + chr1_2:76817857-76817876 None:intergenic 30.0%
ATATGGCAGCAAGAAAAATA+CGG + chr1_2:76817885-76817904 None:intergenic 30.0%
! TCTTTTGTTAAACATTTGGC+AGG - chr1_2:76817991-76818010 Msa0093800:intron 30.0%
TAAGGTTATCAAAGTTCAAG+AGG - chr1_2:76818053-76818072 Msa0093800:intron 30.0%
AAGGTTATCAAAGTTCAAGA+GGG - chr1_2:76818054-76818073 Msa0093800:intron 30.0%
AAATCCATTTCCAACTTCAA+TGG + chr1_2:76818133-76818152 None:intergenic 30.0%
! ATTGAAGTTGGAAATGGATT+TGG - chr1_2:76818132-76818151 Msa0093800:intron 30.0%
AAGGATGAGTAGTATGAAAA+TGG - chr1_2:76818404-76818423 Msa0093800:intron 30.0%
ATGAGTAGTATGAAAATGGT+TGG - chr1_2:76818408-76818427 Msa0093800:intron 30.0%
TAAAAGCAATACAAAGCCAA+AGG + chr1_2:76818778-76818797 None:intergenic 30.0%
TCAAAGTGAAGGGAAAAAAA+AGG + chr1_2:76818806-76818825 None:intergenic 30.0%
GAGAAATAAACTCAAAGTGA+AGG + chr1_2:76818817-76818836 None:intergenic 30.0%
AGTGTTGTAAAGGGAAAATT+TGG + chr1_2:76819001-76819020 None:intergenic 30.0%
TTTGGAAGTAGTGTTGTAAA+GGG + chr1_2:76819010-76819029 None:intergenic 30.0%
ATTTGGAAGTAGTGTTGTAA+AGG + chr1_2:76819011-76819030 None:intergenic 30.0%
TACAACACTACTTCCAAATT+TGG - chr1_2:76819012-76819031 Msa0093800:intron 30.0%
GAATTTGAGTCATAGTTCAA+CGG + chr1_2:76819047-76819066 None:intergenic 30.0%
AACATAACAAGTGACTATGT+TGG + chr1_2:76819180-76819199 None:intergenic 30.0%
AACATGATTAACCATTATGG+AGG - chr1_2:76819258-76819277 Msa0093800:intron 30.0%
TTTATTATAAGGCATGGCAA+AGG + chr1_2:76819302-76819321 None:intergenic 30.0%
TCTGATCAATTGAAGAATGT+TGG + chr1_2:76819616-76819635 None:intergenic 30.0%
TGACAATATGCAGAAACATT+AGG - chr1_2:76819652-76819671 Msa0093800:five_prime_UTR 30.0%
TGGATGAAAAATCTTGTTCA+AGG - chr1_2:76819692-76819711 Msa0093800:five_prime_UTR 30.0%
GGATGAAAAATCTTGTTCAA+GGG - chr1_2:76819693-76819712 Msa0093800:five_prime_UTR 30.0%
CCTCAAATATATCAGCTAAA+CGG - chr1_2:76819740-76819759 Msa0093800:intron 30.0%
GGTAAGAAGATCAAATGATA+TGG - chr1_2:76819804-76819823 Msa0093800:intron 30.0%
AAGAAGATCAAATGATATGG+TGG - chr1_2:76819807-76819826 Msa0093800:intron 30.0%
!!! CTGATGCTAATTTTGAAATG+TGG + chr1_2:76819870-76819889 None:intergenic 30.0%
CATTTCAAAATTAGCATCAG+TGG - chr1_2:76819870-76819889 Msa0093800:intron 30.0%
! TCTTTTCTAATTCTGTTCAG+AGG + chr1_2:76820147-76820166 None:intergenic 30.0%
TTGAGATCTAGCAAAAACAG+AGG + chr1_2:76808250-76808269 None:intergenic 35.0%
TTTCAAAATATGGCCTGTGA+TGG + chr1_2:76808273-76808292 None:intergenic 35.0%
! GTTGAGTATTTCTATTGTGG+TGG + chr1_2:76808298-76808317 None:intergenic 35.0%
AACTATAGTGGTGAATTTCC+CGG + chr1_2:76808403-76808422 None:intergenic 35.0%
CTGATTTCTTCGTTTCTTCT+TGG - chr1_2:76808855-76808874 Msa0093800:three_prime_UTR 35.0%
TTCTTCTTGGAATGTGATCA+AGG - chr1_2:76808868-76808887 Msa0093800:three_prime_UTR 35.0%
TCTTCTTGGAATGTGATCAA+GGG - chr1_2:76808869-76808888 Msa0093800:three_prime_UTR 35.0%
!! CTTGCTACTTTCAAATGCAT+TGG - chr1_2:76808909-76808928 Msa0093800:three_prime_UTR 35.0%
AGAGATGGAGAAATGAAGTA+AGG + chr1_2:76809259-76809278 None:intergenic 35.0%
TGCCAACGTTTATGAGTAAA+CGG - chr1_2:76809741-76809760 Msa0093800:CDS 35.0%
TACCGTTTACTCATAAACGT+TGG + chr1_2:76809746-76809765 None:intergenic 35.0%
! GGAATACAGTTGAACTGTTT+TGG + chr1_2:76809879-76809898 None:intergenic 35.0%
ATTCAGTCGTAAATGTTTGC+AGG + chr1_2:76809900-76809919 None:intergenic 35.0%
TGCAAACATTTACGACTGAA+TGG - chr1_2:76809899-76809918 Msa0093800:intron 35.0%
CAAACACGAATGAAGATTGT+CGG + chr1_2:76810160-76810179 None:intergenic 35.0%
TTACAAATCAGGATCAAAGG+TGG + chr1_2:76810229-76810248 None:intergenic 35.0%
AGCTTACAAATCAGGATCAA+AGG + chr1_2:76810232-76810251 None:intergenic 35.0%
GTATGGCCTGATAGAAAAAA+GGG - chr1_2:76810453-76810472 Msa0093800:intron 35.0%
AACAACCAACTACAAACTCA+TGG - chr1_2:76810636-76810655 Msa0093800:intron 35.0%
ATATGCCATGAGTTTGTAGT+TGG + chr1_2:76810644-76810663 None:intergenic 35.0%
! AATCCATGGCTACATTGTTT+TGG + chr1_2:76810753-76810772 None:intergenic 35.0%
! CTATCTGATTGGTAGCTTAT+TGG - chr1_2:76810858-76810877 Msa0093800:intron 35.0%
TCTGAACAAAAAGTCTGCAT+AGG - chr1_2:76810905-76810924 Msa0093800:intron 35.0%
! AAAAGTAGAGGTGGTGTTAA+AGG + chr1_2:76810977-76810996 None:intergenic 35.0%
AGAAAGACATTAGACTTTGG+AGG + chr1_2:76811039-76811058 None:intergenic 35.0%
CTCAGAAAGACATTAGACTT+TGG + chr1_2:76811042-76811061 None:intergenic 35.0%
CTGTCATTGTTGTGTAAAGT+TGG - chr1_2:76811540-76811559 Msa0093800:intron 35.0%
!! ATTTGGTTCCTCTAAAGTGA+GGG - chr1_2:76811625-76811644 Msa0093800:intron 35.0%
AAGCAAGCTATTGAACAAAG+AGG + chr1_2:76811956-76811975 None:intergenic 35.0%
!! AATCTCTTGGCCATTTTAAG+CGG - chr1_2:76812194-76812213 Msa0093800:intron 35.0%
CAATTAAGAGGCTTTCAGTT+CGG - chr1_2:76812509-76812528 Msa0093800:intron 35.0%
AATGGAAAAATACCTGGAAG+TGG - chr1_2:76812625-76812644 Msa0093800:intron 35.0%
AAGAAATCAGATGAGGTGAT+GGG + chr1_2:76812685-76812704 None:intergenic 35.0%
TCATGAGTTTATTTCAGCCT+AGG - chr1_2:76812713-76812732 Msa0093800:intron 35.0%
TTTCTACTGATGTTAAGCCT+AGG + chr1_2:76812733-76812752 None:intergenic 35.0%
! AGTTTTCCTAGACGAGTAAA+CGG + chr1_2:76812786-76812805 None:intergenic 35.0%
ATGTATGAACTTGGCGAAAA+TGG - chr1_2:76812938-76812957 Msa0093800:intron 35.0%
ATTCAGTCATAACTGTTTGC+AGG + chr1_2:76813265-76813284 None:intergenic 35.0%
TGCAAACAGTTATGACTGAA+TGG - chr1_2:76813264-76813283 Msa0093800:intron 35.0%
!!! CATTTTTGAGTTCCGTTCAA+GGG + chr1_2:76813459-76813478 None:intergenic 35.0%
!!! TCATTTTTGAGTTCCGTTCA+AGG + chr1_2:76813460-76813479 None:intergenic 35.0%
TTACAAATCAGGATCAAAGG+TGG + chr1_2:76810229-76810248 None:intergenic 35.0%
AATCTTTCCAACAACTTTGG+AGG + chr1_2:76813749-76813768 None:intergenic 35.0%
AAAGCACAATGCAAAGACTA+AGG + chr1_2:76814356-76814375 None:intergenic 35.0%
! TTACATTTGCTGCATCCAAT+AGG - chr1_2:76814419-76814438 Msa0093800:intron 35.0%
AGAAACCTTCACAAACCTAT+TGG + chr1_2:76814437-76814456 None:intergenic 35.0%
AAAAGACAAGAAATGGAGCA+AGG + chr1_2:76814492-76814511 None:intergenic 35.0%
TGAACTTAAGTGATAGGTTG+AGG + chr1_2:76814666-76814685 None:intergenic 35.0%
TTTGGCATTATTCCTTACCA+AGG + chr1_2:76814798-76814817 None:intergenic 35.0%
! CATTTTATGCAATCTGTGCA+TGG - chr1_2:76814881-76814900 Msa0093800:intron 35.0%
AAGTACCTTTATTGGACTTC+TGG - chr1_2:76814945-76814964 Msa0093800:intron 35.0%
AGAAATTGAATGAACACGTG+AGG - chr1_2:76815229-76815248 Msa0093800:intron 35.0%
GAAATTGAATGAACACGTGA+GGG - chr1_2:76815230-76815249 Msa0093800:intron 35.0%
AGGGTTAATGATAGGTGATT+GGG + chr1_2:76815577-76815596 None:intergenic 35.0%
CGAAGTTCGATTGATGAATA+AGG + chr1_2:76815820-76815839 None:intergenic 35.0%
AGTTTGATGCGATTATTGCT+GGG + chr1_2:76815853-76815872 None:intergenic 35.0%
AAGTTTGATGCGATTATTGC+TGG + chr1_2:76815854-76815873 None:intergenic 35.0%
CTGCAAAATCAGGAAGAAAA+AGG + chr1_2:76815975-76815994 None:intergenic 35.0%
! CTTTTTCTTCCTGATTTTGC+AGG - chr1_2:76815973-76815992 Msa0093800:intron 35.0%
TGTATTGGATATGAAGAGAG+AGG - chr1_2:76816043-76816062 Msa0093800:intron 35.0%
!!! TTGTACGGATCTTTTTTGCT+TGG - chr1_2:76816640-76816659 Msa0093800:intron 35.0%
AATAACCTCGTCGTTATCAA+AGG + chr1_2:76816910-76816929 None:intergenic 35.0%
CTATGCAGCAGTTATGAAAA+AGG + chr1_2:76816964-76816983 None:intergenic 35.0%
CTTAATCATTATGATGCCCT+TGG + chr1_2:76817006-76817025 None:intergenic 35.0%
AAAGGCTTGCACCATATTAA+AGG + chr1_2:76817163-76817182 None:intergenic 35.0%
TTTCCCCTCTAGTTATTTGA+AGG - chr1_2:76817274-76817293 Msa0093800:intron 35.0%
! TAAGTGATGGAAACCATTCA+AGG + chr1_2:76817511-76817530 None:intergenic 35.0%
TAAATGCATAGCCAATCTGA+AGG - chr1_2:76817608-76817627 Msa0093800:intron 35.0%
AAGCTAGCAAACAGTATGAA+AGG - chr1_2:76817647-76817666 Msa0093800:intron 35.0%
! AGGTTTTACCTTTATGGACA+TGG - chr1_2:76817667-76817686 Msa0093800:intron 35.0%
! AATCCTATAGGCTTTATCTG+GGG - chr1_2:76817731-76817750 Msa0093800:intron 35.0%
!! GGAAGGTTGAACTTGTTATA+GGG - chr1_2:76817798-76817817 Msa0093800:five_prime_UTR 35.0%
TCCAGATTGTATGTCAGATA+TGG + chr1_2:76817902-76817921 None:intergenic 35.0%
!!! CTTCAATGGAAGCATTTTGA+TGG + chr1_2:76818119-76818138 None:intergenic 35.0%
CAAAATGCTTCCATTGAAGT+TGG - chr1_2:76818120-76818139 Msa0093800:intron 35.0%
! TTTTGTGGATGATGTGGATA+TGG - chr1_2:76818209-76818228 Msa0093800:intron 35.0%
CAAACATGTTACGAACACAA+GGG + chr1_2:76818296-76818315 None:intergenic 35.0%
CTAAGAAAGGTAAAAGACCA+TGG + chr1_2:76818495-76818514 None:intergenic 35.0%
! AGCCTTTTAGGCTTAAAAAC+AGG - chr1_2:76818544-76818563 Msa0093800:five_prime_UTR 35.0%
!!! GTCCTGTTTTTAAGCCTAAA+AGG + chr1_2:76818549-76818568 None:intergenic 35.0%
GGAGAGTTTATTATAAGGCA+TGG + chr1_2:76819308-76819327 None:intergenic 35.0%
! AGATTTTTCATCCACTCGTA+TGG + chr1_2:76819686-76819705 None:intergenic 35.0%
AAAATCTTGTTCAAGGGCAA+CGG - chr1_2:76819699-76819718 Msa0093800:five_prime_UTR 35.0%
CCGTTTAGCTGATATATTTG+AGG + chr1_2:76819743-76819762 None:intergenic 35.0%
! AGTGGATCCTTTTTCCATAA+TGG - chr1_2:76819780-76819799 Msa0093800:intron 35.0%
CTTACCACCATTATGGAAAA+AGG + chr1_2:76819790-76819809 None:intergenic 35.0%
TGATCTTCTTACCACCATTA+TGG + chr1_2:76819797-76819816 None:intergenic 35.0%
TGGTGGAATAAATCCATTGA+AGG - chr1_2:76819824-76819843 Msa0093800:intron 35.0%
AGAGTGCAGACAAAAGAAAA+AGG - chr1_2:76820180-76820199 Msa0093800:five_prime_UTR 35.0%
GAGTGCAGACAAAAGAAAAA+GGG - chr1_2:76820181-76820200 Msa0093800:five_prime_UTR 35.0%
! ACAAAAGAAAAAGGGTTGGT+CGG - chr1_2:76820189-76820208 Msa0093800:five_prime_UTR 35.0%
!!! CGGTTTTGTTGAGAAAAGAA+AGG - chr1_2:76820334-76820353 Msa0093800:five_prime_UTR 35.0%
!! GCATGTTTTTGCAGAGAAAG+AGG + chr1_2:76808131-76808150 None:intergenic 40.0%
AGAGGAGAATTATTACGGTG+TGG + chr1_2:76808232-76808251 None:intergenic 40.0%
!! TCATAGACCATTGCTGTTTC+AGG + chr1_2:76808940-76808959 None:intergenic 40.0%
CAACACAAGAAACGACACAT+TGG + chr1_2:76809211-76809230 None:intergenic 40.0%
GTGTTGTGCAAGATTTGCAT+CGG - chr1_2:76809225-76809244 Msa0093800:three_prime_UTR 40.0%
GATGGAGAAATGAAGTAAGG+AGG + chr1_2:76809256-76809275 None:intergenic 40.0%
GTAGCTCTTCTGCTATAAGT+GGG + chr1_2:76809454-76809473 None:intergenic 40.0%
AGTAGCTCTTCTGCTATAAG+TGG + chr1_2:76809455-76809474 None:intergenic 40.0%
GTTTACTCATAAACGTTGGC+AGG + chr1_2:76809742-76809761 None:intergenic 40.0%
!! GTTGAACTGTTTTGGGTGAA+AGG + chr1_2:76809871-76809890 None:intergenic 40.0%
TGATGTCTTGCTTATGATGC+AGG - chr1_2:76810026-76810045 Msa0093800:intron 40.0%
GATGTCTTGCTTATGATGCA+GGG - chr1_2:76810027-76810046 Msa0093800:intron 40.0%
AAACAGAAGTCACCCTTGAA+TGG - chr1_2:76810085-76810104 Msa0093800:intron 40.0%
GGTATGGCCTGATAGAAAAA+AGG - chr1_2:76810452-76810471 Msa0093800:intron 40.0%
AGTGGGTGTGTAGAAATCTA+AGG - chr1_2:76810506-76810525 Msa0093800:intron 40.0%
GTGGGTGTGTAGAAATCTAA+GGG - chr1_2:76810507-76810526 Msa0093800:intron 40.0%
AGTTGGTTGTTACACAGAGT+TGG + chr1_2:76810627-76810646 None:intergenic 40.0%
AGACCAAAACAATGTAGCCA+TGG - chr1_2:76810747-76810766 Msa0093800:intron 40.0%
! CAATTGATTTCATGTACGGC+TGG - chr1_2:76811012-76811031 Msa0093800:intron 40.0%
ACCACATTCCCAATTTCTGT+TGG - chr1_2:76811386-76811405 Msa0093800:intron 40.0%
ACCAACAGAAATTGGGAATG+TGG + chr1_2:76811390-76811409 None:intergenic 40.0%
!! CGCACTTTGTTGTTTCTCTA+AGG - chr1_2:76811493-76811512 Msa0093800:intron 40.0%
TAGAGGAACCAAATCCACTT+TGG + chr1_2:76811619-76811638 None:intergenic 40.0%
!! GATTTGGTTCCTCTAAAGTG+AGG - chr1_2:76811624-76811643 Msa0093800:intron 40.0%
CATAAGAAGAGCTCGACAAA+AGG - chr1_2:76812053-76812072 Msa0093800:intron 40.0%
!! ATCACTTGCTGTGAATCTCT+TGG - chr1_2:76812181-76812200 Msa0093800:intron 40.0%
!! GAAGGTACAATAGCGAGTTT+TGG - chr1_2:76812655-76812674 Msa0093800:intron 40.0%
AGAAATCAGATGAGGTGATG+GGG + chr1_2:76812684-76812703 None:intergenic 40.0%
CAAGAAATCAGATGAGGTGA+TGG + chr1_2:76812686-76812705 None:intergenic 40.0%
CATCACCTCATCTGATTTCT+TGG - chr1_2:76812684-76812703 Msa0093800:intron 40.0%
CTTCACCAAGAAATCAGATG+AGG + chr1_2:76812692-76812711 None:intergenic 40.0%
TGATGTCTTGCTTATGATGC+AGG - chr1_2:76810026-76810045 Msa0093800:intron 40.0%
GATGTCTTGCTTATGATGCA+GGG - chr1_2:76810027-76810046 Msa0093800:intron 40.0%
TTACAGAAGTCACCCTTGAA+CGG - chr1_2:76813444-76813463 Msa0093800:intron 40.0%
AGTGGGTGTGTAGAAATCTA+AGG - chr1_2:76810506-76810525 Msa0093800:intron 40.0%
GTGGGTGTGTAGAAATCTAA+GGG - chr1_2:76810507-76810526 Msa0093800:intron 40.0%
!! TTTTGATTGAAGGGCAAGTG+AGG + chr1_2:76814234-76814253 None:intergenic 40.0%
TGCATCCAATAGGTTTGTGA+AGG - chr1_2:76814429-76814448 Msa0093800:intron 40.0%
TTGTGTGCAGGAATCTCAAA+AGG - chr1_2:76814705-76814724 Msa0093800:intron 40.0%
TGTGTGCAGGAATCTCAAAA+GGG - chr1_2:76814706-76814725 Msa0093800:intron 40.0%
GCATTATTCCTTACCAAGGT+TGG + chr1_2:76814794-76814813 None:intergenic 40.0%
ACACACCAGAAGTCCAATAA+AGG + chr1_2:76814953-76814972 None:intergenic 40.0%
TAATGATAGGTGATTGGGCT+TGG + chr1_2:76815572-76815591 None:intergenic 40.0%
GAGGGTTAATGATAGGTGAT+TGG + chr1_2:76815578-76815597 None:intergenic 40.0%
CAAGGTTGAGGGTTAATGAT+AGG + chr1_2:76815585-76815604 None:intergenic 40.0%
GAAATGAGGGAGAGAATACA+AGG + chr1_2:76815603-76815622 None:intergenic 40.0%
TCAGTATCAGGAGGAAATGA+GGG + chr1_2:76815616-76815635 None:intergenic 40.0%
TTCAGTATCAGGAGGAAATG+AGG + chr1_2:76815617-76815636 None:intergenic 40.0%
TAGCGAGAAGAGAAGGAAAA+GGG + chr1_2:76815648-76815667 None:intergenic 40.0%
GTTCGATTGATGAATAAGGC+CGG + chr1_2:76815816-76815835 None:intergenic 40.0%
GAGAGGAGATAAAAGTAGCA+AGG + chr1_2:76815947-76815966 None:intergenic 40.0%
GGAAGAAAAAGGATTCTGAG+AGG + chr1_2:76815964-76815983 None:intergenic 40.0%
TACGTGTTCGGAAACTGAAT+TGG + chr1_2:76816576-76816595 None:intergenic 40.0%
!!! TTTTGCTTGGCTTGTGCTTT+TGG - chr1_2:76816653-76816672 Msa0093800:intron 40.0%
!! AATTGCCTTTGATAACGACG+AGG - chr1_2:76816902-76816921 Msa0093800:intron 40.0%
! TACCTTGTAGGTGTCATAAC+TGG - chr1_2:76817209-76817228 Msa0093800:intron 40.0%
GAAACCATTCAAGGAGAAAC+TGG + chr1_2:76817502-76817521 None:intergenic 40.0%
AAGTCTTGCCATGTCCATAA+AGG + chr1_2:76817678-76817697 None:intergenic 40.0%
!! GGGAAGGTTGAACTTGTTAT+AGG - chr1_2:76817797-76817816 Msa0093800:five_prime_UTR 40.0%
!! GGTTGAACTTGTTATAGGGA+AGG - chr1_2:76817802-76817821 Msa0093800:five_prime_UTR 40.0%
TGTTATAGGGAAGGCTTTAC+AGG - chr1_2:76817811-76817830 Msa0093800:five_prime_UTR 40.0%
GTTATAGGGAAGGCTTTACA+GGG - chr1_2:76817812-76817831 Msa0093800:five_prime_UTR 40.0%
GCCATATCTGACATACAATC+TGG - chr1_2:76817898-76817917 Msa0093800:intron 40.0%
GCTTCCATTGAAGTTGGAAA+TGG - chr1_2:76818126-76818145 Msa0093800:intron 40.0%
GCAAACATGTTACGAACACA+AGG + chr1_2:76818297-76818316 None:intergenic 40.0%
AACTTTGTCTCTCTCTCTCT+TGG - chr1_2:76818331-76818350 Msa0093800:intron 40.0%
AAGGGAAAATTTGGTACCTC+TGG + chr1_2:76818992-76819011 None:intergenic 40.0%
ACGGAAACGACAACCAAATT+TGG + chr1_2:76819028-76819047 None:intergenic 40.0%
TTCACGTTCACACTCTTACT+AGG + chr1_2:76819329-76819348 None:intergenic 40.0%
AAACCAGTTGAAGGACCAAA+CGG - chr1_2:76819572-76819591 Msa0093800:intron 40.0%
! TTTTTCATCCACTCGTATGG+AGG + chr1_2:76819683-76819702 None:intergenic 40.0%
TATATCAGCTAAACGGTTCC+AGG - chr1_2:76819747-76819766 Msa0093800:intron 40.0%
! GGATCCTTTTTCCATAATGG+TGG - chr1_2:76819783-76819802 Msa0093800:intron 40.0%
! GTGGACAATTCTTGATTCGA+CGG + chr1_2:76819851-76819870 None:intergenic 40.0%
AAATTAGCATCAGTGGAAGC+AGG - chr1_2:76819877-76819896 Msa0093800:intron 40.0%
!!! GGGAATGCTGTTTTTGATGT+TGG - chr1_2:76820014-76820033 Msa0093800:intron 40.0%
!!! GCTGTTTTTGATGTTGGTGA+CGG - chr1_2:76820020-76820039 Msa0093800:intron 40.0%
GGCAAAATCAGACTTTCATC+CGG + chr1_2:76820052-76820071 None:intergenic 40.0%
GCAGACAAAAGAAAAAGGGT+TGG - chr1_2:76820185-76820204 Msa0093800:five_prime_UTR 40.0%
GACTGTTCTTCTTCAACAAC+AGG + chr1_2:76820275-76820294 None:intergenic 40.0%
TGTTGAAGAAGAACAGTCGA+CGG - chr1_2:76820277-76820296 Msa0093800:five_prime_UTR 40.0%
! CCTGTTTCTTCTTCAACAAC+AGG + chr1_2:76820309-76820328 None:intergenic 40.0%
CCTGTTGTTGAAGAAGAAAC+AGG - chr1_2:76820306-76820325 Msa0093800:five_prime_UTR 40.0%
TGTTGAAGAAGAAACAGGCA+CGG - chr1_2:76820311-76820330 Msa0093800:five_prime_UTR 40.0%
GTTACTGTTCTCCTCTTTCA+TGG + chr1_2:76820403-76820422 None:intergenic 40.0%
TATTACGGTGTGGCCAATAG+AGG + chr1_2:76808222-76808241 None:intergenic 45.0%
TGCTAGATCTCAACCATCAC+AGG - chr1_2:76808257-76808276 Msa0093800:three_prime_UTR 45.0%
! GTGATAGAGCATCTACTCTG+CGG + chr1_2:76808984-76809003 None:intergenic 45.0%
GAAAGTTCATACCCACATGG+AGG + chr1_2:76810138-76810157 None:intergenic 45.0%
TCGGAAAGTTCATACCCACA+TGG + chr1_2:76810141-76810160 None:intergenic 45.0%
TGTTGGTGTGCTTGTGAACA+TGG + chr1_2:76811594-76811613 None:intergenic 45.0%
! CCAAATCCACTTTGGTGTGT+TGG + chr1_2:76811611-76811630 None:intergenic 45.0%
! CCAACACACCAAAGTGGATT+TGG - chr1_2:76811608-76811627 Msa0093800:intron 45.0%
CATTCAGTCCCTCACTTTAG+AGG + chr1_2:76811636-76811655 None:intergenic 45.0%
!! CTCTAAAGTGAGGGACTGAA+TGG - chr1_2:76811634-76811653 Msa0093800:intron 45.0%
!! GTTGGTGACTGAATCTTGTG+AGG - chr1_2:76812017-76812036 Msa0093800:intron 45.0%
GTTCAAGGGTGACTTCTGTA+AGG + chr1_2:76813445-76813464 None:intergenic 45.0%
GAAAGTTCATACCCACATGG+AGG + chr1_2:76810138-76810157 None:intergenic 45.0%
TCGGAAAGTTCATACCCACA+TGG + chr1_2:76810141-76810160 None:intergenic 45.0%
GGTGTGTAGAAATCTAAGGG+AGG - chr1_2:76810510-76810529 Msa0093800:intron 45.0%
AGACAAGAAATGGAGCAAGG+AGG + chr1_2:76814489-76814508 None:intergenic 45.0%
GGGTGTATTAAGCAGAACGT+TGG - chr1_2:76814726-76814745 Msa0093800:intron 45.0%
TGGAATCAGACAACCAACCT+TGG - chr1_2:76814778-76814797 Msa0093800:intron 45.0%
TCAGACAACCAACCTTGGTA+AGG - chr1_2:76814783-76814802 Msa0093800:intron 45.0%
AATGAACACGTGAGGGATGT+GGG - chr1_2:76815237-76815256 Msa0093800:intron 45.0%
GGGGTGTATGCCTAAAACTA+TGG + chr1_2:76815530-76815549 None:intergenic 45.0%
GGGAGAGAATACAAGGTTGA+GGG + chr1_2:76815596-76815615 None:intergenic 45.0%
AGGGAGAGAATACAAGGTTG+AGG + chr1_2:76815597-76815616 None:intergenic 45.0%
GTAGCGAGAAGAGAAGGAAA+AGG + chr1_2:76815649-76815668 None:intergenic 45.0%
! GGTGGTTGACGGATAAAATC+CGG + chr1_2:76815674-76815693 None:intergenic 45.0%
CCAAACAAGGCTGAGATTGA+CGG + chr1_2:76815695-76815714 None:intergenic 45.0%
! TGGTGTTTTCCGAGCAATTC+CGG - chr1_2:76815794-76815813 Msa0093800:intron 45.0%
TGAATAAGGCCGGAATTGCT+CGG + chr1_2:76815806-76815825 None:intergenic 45.0%
TTCACTGCTCCTGCAAAATC+AGG + chr1_2:76815985-76816004 None:intergenic 45.0%
AACTGCTGCATAGATCTCTG+TGG - chr1_2:76816971-76816990 Msa0093800:intron 45.0%
CTCCAGTTATGACACCTACA+AGG + chr1_2:76817214-76817233 None:intergenic 45.0%
ACTGTACCTGAACCATCAAG+AGG + chr1_2:76817248-76817267 None:intergenic 45.0%
CCTAAAATAGCAACTGCCAG+TGG + chr1_2:76817390-76817409 None:intergenic 45.0%
!!! CCACTGGCAGTTGCTATTTT+AGG - chr1_2:76817387-76817406 Msa0093800:intron 45.0%
CCATTCAAGGAGAAACTGGA+GGG + chr1_2:76817498-76817517 None:intergenic 45.0%
ACCATTCAAGGAGAAACTGG+AGG + chr1_2:76817499-76817518 None:intergenic 45.0%
CTTCCCCAGATAAAGCCTAT+AGG + chr1_2:76817737-76817756 None:intergenic 45.0%
! CTATAGGCTTTATCTGGGGA+AGG - chr1_2:76817735-76817754 Msa0093800:intron 45.0%
GCTTTATCTGGGGAAGGTAA+GGG - chr1_2:76817741-76817760 Msa0093800:intron 45.0%
!!! GAGGCTGGTTTCTTTTGATC+AGG - chr1_2:76818875-76818894 Msa0093800:intron 45.0%
!! GCTGGTTTCTTTTGATCAGG+TGG - chr1_2:76818878-76818897 Msa0093800:intron 45.0%
CTCAAGCTGATTGCACATGT+TGG - chr1_2:76818907-76818926 Msa0093800:intron 45.0%
TGTTAGTGTTGCAAAGCCAG+AGG - chr1_2:76818973-76818992 Msa0093800:intron 45.0%
AACCATTATGGAGGACTTGC+AGG - chr1_2:76819267-76819286 Msa0093800:intron 45.0%
CTCACCTTGGAAGATCAATC+CGG + chr1_2:76819466-76819485 None:intergenic 45.0%
AGCCTGGAAAAATGATGGCA+AGG - chr1_2:76819495-76819514 Msa0093800:intron 45.0%
GCCTGGAAAAATGATGGCAA+GGG - chr1_2:76819496-76819515 Msa0093800:intron 45.0%
CCTGGAAAAATGATGGCAAG+GGG - chr1_2:76819497-76819516 Msa0093800:intron 45.0%
ATGATGGCAAGGGGTTACTT+TGG - chr1_2:76819506-76819525 Msa0093800:intron 45.0%
! GTTACTTTGGCGAATCAAGG+TGG - chr1_2:76819519-76819538 Msa0093800:intron 45.0%
ACTATCTGAGCCATATCGTG+GGG + chr1_2:76819548-76819567 None:intergenic 45.0%
GACTATCTGAGCCATATCGT+GGG + chr1_2:76819549-76819568 None:intergenic 45.0%
ACGATATGGCTCAGATAGTC+CGG - chr1_2:76819549-76819568 Msa0093800:intron 45.0%
ATAGTCCGGAAACCAGTTGA+AGG - chr1_2:76819563-76819582 Msa0093800:intron 45.0%
! TTGGTCCTTCAACTGGTTTC+CGG + chr1_2:76819571-76819590 None:intergenic 45.0%
AGGAAAATCCTCCATACGAG+TGG - chr1_2:76819672-76819691 Msa0093800:five_prime_UTR 45.0%
GGAAAAAGGATCCACTGCTA+TGG + chr1_2:76819776-76819795 None:intergenic 45.0%
! TTGATTCGACGGTCCTTCAA+TGG + chr1_2:76819840-76819859 None:intergenic 45.0%
! GGAAGCAGGCTTTTCTTTTC+CGG - chr1_2:76819891-76819910 Msa0093800:intron 45.0%
! GAAGCAGGCTTTTCTTTTCC+GGG - chr1_2:76819892-76819911 Msa0093800:intron 45.0%
TGATGTGGTCGATAACCTTG+TGG - chr1_2:76819923-76819942 Msa0093800:intron 45.0%
GATGTGGTCGATAACCTTGT+GGG - chr1_2:76819924-76819943 Msa0093800:intron 45.0%
! CATGTGGGCTGAATTGTTTG+AGG + chr1_2:76819962-76819981 None:intergenic 45.0%
CTCAAACAATTCAGCCCACA+TGG - chr1_2:76819960-76819979 Msa0093800:intron 45.0%
GAAGGATCACTACACCATGT+GGG + chr1_2:76819977-76819996 None:intergenic 45.0%
AGAAGGATCACTACACCATG+TGG + chr1_2:76819978-76819997 None:intergenic 45.0%
TTCTCCATCTCGAGCACAAA+GGG - chr1_2:76819994-76820013 Msa0093800:intron 45.0%
!!! TTTTGATGTTGGTGACGGCA+AGG - chr1_2:76820025-76820044 Msa0093800:intron 45.0%
!! TTTGATGTTGGTGACGGCAA+GGG - chr1_2:76820026-76820045 Msa0093800:intron 45.0%
TGAGAAAAGAAAGGCAGCAG+CGG - chr1_2:76820343-76820362 Msa0093800:five_prime_UTR 45.0%
GGCAGATGATACCATGAAAG+AGG - chr1_2:76820389-76820408 Msa0093800:five_prime_UTR 45.0%
!! TTAAATTGAAATTATTTAAT+TGG - chr1_2:76819113-76819132 Msa0093800:intron 5.0%
TGATTCATGGCCACACAGGA+TGG + chr1_2:76808188-76808207 None:intergenic 50.0%
TCCTGTGTGGCCATGAATCA+TGG - chr1_2:76808188-76808207 Msa0093800:three_prime_UTR 50.0%
ACCATGATTCATGGCCACAC+AGG + chr1_2:76808192-76808211 None:intergenic 50.0%
GGTCAGACGACCATGATTCA+TGG + chr1_2:76808201-76808220 None:intergenic 50.0%
CATGGTCGTCTGACCTCTAT+TGG - chr1_2:76808206-76808225 Msa0093800:three_prime_UTR 50.0%
GAGAGAGAGAGAGAGAGAGA+TGG + chr1_2:76809274-76809293 None:intergenic 50.0%
GTCTTGCTTATGATGCAGGG+AGG - chr1_2:76810030-76810049 Msa0093800:intron 50.0%
AGTTCATACCCACATGGAGG+CGG + chr1_2:76810135-76810154 None:intergenic 50.0%
!! TGGGTGTTGATGAAGAGCAC+TGG - chr1_2:76810788-76810807 Msa0093800:CDS 50.0%
AGCACACCAACACACCAAAG+TGG - chr1_2:76811602-76811621 Msa0093800:intron 50.0%
GAAGAGCTCGACAAAAGGTG+TGG - chr1_2:76812058-76812077 Msa0093800:intron 50.0%
! GCTCGACAAAAGGTGTGGTT+TGG - chr1_2:76812063-76812082 Msa0093800:intron 50.0%
CCTTCACAAAAGCCACTTCC+AGG + chr1_2:76812640-76812659 None:intergenic 50.0%
! CCTGGAAGTGGCTTTTGTGA+AGG - chr1_2:76812637-76812656 Msa0093800:intron 50.0%
GCTGATCCGTTTACTCGTCT+AGG - chr1_2:76812777-76812796 Msa0093800:intron 50.0%
CCAAATTGGGAGATGTTGGC+AGG + chr1_2:76812984-76813003 None:intergenic 50.0%
CCTGCCAACATCTCCCAATT+TGG - chr1_2:76812981-76813000 Msa0093800:intron 50.0%
GCTGCCAAATTGGGAGATGT+TGG + chr1_2:76812988-76813007 None:intergenic 50.0%
GTCTTGCTTATGATGCAGGG+AGG - chr1_2:76810030-76810049 Msa0093800:intron 50.0%
AGTTCATACCCACATGGAGG+CGG + chr1_2:76810135-76810154 None:intergenic 50.0%
GAATGAACACGTGAGGGATG+TGG - chr1_2:76815236-76815255 Msa0093800:intron 50.0%
ATGAACACGTGAGGGATGTG+GGG - chr1_2:76815238-76815257 Msa0093800:intron 50.0%
ACCCCGACACTAACCGAAAT+TGG - chr1_2:76815545-76815564 Msa0093800:intron 50.0%
CCCAATTTCGGTTAGTGTCG+GGG + chr1_2:76815549-76815568 None:intergenic 50.0%
CCCCGACACTAACCGAAATT+GGG - chr1_2:76815546-76815565 Msa0093800:intron 50.0%
GCCCAATTTCGGTTAGTGTC+GGG + chr1_2:76815550-76815569 None:intergenic 50.0%
GGCCCAATTTCGGTTAGTGT+CGG + chr1_2:76815551-76815570 None:intergenic 50.0%
GATTGGGCTTGGCCCAATTT+CGG + chr1_2:76815561-76815580 None:intergenic 50.0%
CAGCGTGTTTCAGTATCAGG+AGG + chr1_2:76815625-76815644 None:intergenic 50.0%
! GGTTGACGGATAAAATCCGG+CGG + chr1_2:76815671-76815690 None:intergenic 50.0%
CTGAGATTGACGGTGGTTGA+CGG + chr1_2:76815685-76815704 None:intergenic 50.0%
AACAAGGCTGAGATTGACGG+TGG + chr1_2:76815692-76815711 None:intergenic 50.0%
!! CCGTCAATCTCAGCCTTGTT+TGG - chr1_2:76815692-76815711 Msa0093800:intron 50.0%
AGAGAGGAACCCAGCAATGA+AGG - chr1_2:76816059-76816078 Msa0093800:intron 50.0%
TGCTGCATAGATCTCTGTGG+CGG - chr1_2:76816974-76816993 Msa0093800:intron 50.0%
TCTGTGGCGGCTAAATCCAA+GGG - chr1_2:76816987-76817006 Msa0093800:intron 50.0%
TGAACCATCAAGAGGAGTCG+TGG + chr1_2:76817240-76817259 None:intergenic 50.0%
! ACGACTCCTCTTGATGGTTC+AGG - chr1_2:76817239-76817258 Msa0093800:intron 50.0%
CCCTCCAGTTTCTCCTTGAA+TGG - chr1_2:76817495-76817514 Msa0093800:intron 50.0%
! GGCTTTATCTGGGGAAGGTA+AGG - chr1_2:76817740-76817759 Msa0093800:intron 50.0%
! CAAGAGGGCGTGTGTCTTTA+TGG - chr1_2:76818069-76818088 Msa0093800:intron 50.0%
TCTCGCAAGAGTCTGAGAGA+AGG - chr1_2:76818853-76818872 Msa0093800:intron 50.0%
GACCTGCAAGTCCTCCATAA+TGG + chr1_2:76819272-76819291 None:intergenic 50.0%
GCGATTGTTCTGACGACGAT+TGG - chr1_2:76819354-76819373 Msa0093800:intron 50.0%
ATCTGAGTCTCGTGGAACAG+TGG - chr1_2:76819396-76819415 Msa0093800:intron 50.0%
AACAGTGGTGTGCAAAGCAG+TGG - chr1_2:76819411-76819430 Msa0093800:intron 50.0%
ACAGTGGTGTGCAAAGCAGT+GGG - chr1_2:76819412-76819431 Msa0093800:intron 50.0%
! GCTGTGCATTTTTGCCAAGC+CGG - chr1_2:76819444-76819463 Msa0093800:intron 50.0%
CTTGGAAGATCAATCCGGCT+TGG + chr1_2:76819461-76819480 None:intergenic 50.0%
CAAGCCGGATTGATCTTCCA+AGG - chr1_2:76819459-76819478 Msa0093800:intron 50.0%
GAGCGAGCCTGGAAAAATGA+TGG - chr1_2:76819490-76819509 Msa0093800:intron 50.0%
!! CCCCTTGCCATCATTTTTCC+AGG + chr1_2:76819500-76819519 None:intergenic 50.0%
! GGGGTTACTTTGGCGAATCA+AGG - chr1_2:76819516-76819535 Msa0093800:intron 50.0%
GGACTATCTGAGCCATATCG+TGG + chr1_2:76819550-76819569 None:intergenic 50.0%
TCACCGTTTGGTCCTTCAAC+TGG + chr1_2:76819578-76819597 None:intergenic 50.0%
! GGCTTTTCTTTTCCGGGTTG+AGG - chr1_2:76819898-76819917 Msa0093800:intron 50.0%
! TTCCGGGTTGAGGAATGATG+TGG - chr1_2:76819908-76819927 Msa0093800:intron 50.0%
GACCACATCATTCCTCAACC+CGG + chr1_2:76819913-76819932 None:intergenic 50.0%
CTTTGTGCTCGAGATGGAGA+AGG + chr1_2:76819995-76820014 None:intergenic 50.0%
CTTCTCCATCTCGAGCACAA+AGG - chr1_2:76819993-76820012 Msa0093800:intron 50.0%
CATTCCCTTTGTGCTCGAGA+TGG + chr1_2:76820001-76820020 None:intergenic 50.0%
! TTTTGCCGAACCAGAAGCAG+AGG - chr1_2:76820065-76820084 Msa0093800:intron 50.0%
!! AGGGTTGGTCGGAAAACAGA+AGG - chr1_2:76820200-76820219 Msa0093800:five_prime_UTR 50.0%
ACCTGTTGTTGAGGAGGAAC+AGG - chr1_2:76820237-76820256 Msa0093800:five_prime_UTR 50.0%
CCTGTTGTTGAGGAGGAACA+GGG - chr1_2:76820238-76820257 Msa0093800:five_prime_UTR 50.0%
CTGTTGTTGAGGAGGAACAG+GGG - chr1_2:76820239-76820258 Msa0093800:five_prime_UTR 50.0%
TGAAGAAGAACAGTCGACGG+CGG - chr1_2:76820280-76820299 Msa0093800:five_prime_UTR 50.0%
TGAAGAAGAAACAGGCACGG+CGG - chr1_2:76820314-76820333 Msa0093800:five_prime_UTR 50.0%
TGTGTGTCACGCTGGAAAGA+AGG - chr1_2:76820368-76820387 Msa0093800:five_prime_UTR 50.0%
TTCATGGCCACACAGGATGG+TGG + chr1_2:76808185-76808204 None:intergenic 55.0%
GACGGTTGTGATTTCCGGAG+CGG + chr1_2:76808377-76808396 None:intergenic 55.0%
GGCACGACGGTTGTGATTTC+CGG + chr1_2:76808382-76808401 None:intergenic 55.0%
GGAAATCACAACCGTCGTGC+CGG - chr1_2:76808381-76808400 Msa0093800:three_prime_UTR 55.0%
GAAATCACAACCGTCGTGCC+GGG - chr1_2:76808382-76808401 Msa0093800:three_prime_UTR 55.0%
TGGTGAATTTCCCGGCACGA+CGG + chr1_2:76808395-76808414 None:intergenic 55.0%
GGCAGTGCCTGAAACAGCAA+TGG - chr1_2:76808930-76808949 Msa0093800:three_prime_UTR 55.0%
CTTGCAATCCGCCTCCATGT+GGG - chr1_2:76810124-76810143 Msa0093800:intron 55.0%
CTTGCTTTCCGCCTCCATGT+GGG - chr1_2:76813483-76813502 Msa0093800:intron 55.0%
AGCATCTTCCACTCTGCAGC+TGG - chr1_2:76814758-76814777 Msa0093800:intron 55.0%
GTCTGATTCCAGCTGCAGAG+TGG + chr1_2:76814769-76814788 None:intergenic 55.0%
GGGCAGCGTGTTTCAGTATC+AGG + chr1_2:76815628-76815647 None:intergenic 55.0%
CTCTGTGGCGGCTAAATCCA+AGG - chr1_2:76816986-76817005 Msa0093800:intron 55.0%
! GAGGGCGTGTGTCTTTATGG+AGG - chr1_2:76818072-76818091 Msa0093800:intron 55.0%
GGCGTGTGTCTTTATGGAGG+TGG - chr1_2:76818075-76818094 Msa0093800:intron 55.0%
CGCAAGAGTCTGAGAGAAGG+AGG - chr1_2:76818856-76818875 Msa0093800:intron 55.0%
AGAGTCTGAGAGAAGGAGGC+TGG - chr1_2:76818860-76818879 Msa0093800:intron 55.0%
CGTCGTCAGAACAATCGCTC+TGG + chr1_2:76819352-76819371 None:intergenic 55.0%
!! GAGGAAGCATCTGAGTCTCG+TGG - chr1_2:76819388-76819407 Msa0093800:intron 55.0%
AAGGTGGCAACCCCACGATA+TGG - chr1_2:76819535-76819554 Msa0093800:intron 55.0%
ACCAAACGGTGACTGCTGAC+TGG - chr1_2:76819586-76819605 Msa0093800:intron 55.0%
ACCAGTCAGCAGTCACCGTT+TGG + chr1_2:76819590-76819609 None:intergenic 55.0%
CTTGTTCAAGGGCAACGGCA+CGG - chr1_2:76819704-76819723 Msa0093800:five_prime_UTR 55.0%
TTGTTCAAGGGCAACGGCAC+GGG - chr1_2:76819705-76819724 Msa0093800:intron 55.0%
TCTTTCACGGCCTCTGCTTC+TGG + chr1_2:76820078-76820097 None:intergenic 55.0%
AGCAGAGGCCGTGAAAGATG+CGG - chr1_2:76820080-76820099 Msa0093800:intron 55.0%
GGTCGGAAAACAGAAGGCAG+CGG - chr1_2:76820206-76820225 Msa0093800:five_prime_UTR 55.0%
CCCTGTTCCTCCTCAACAAC+AGG + chr1_2:76820241-76820260 None:intergenic 55.0%
TGTTGAGGAGGAACAGGGGA+CGG - chr1_2:76820243-76820262 Msa0093800:five_prime_UTR 55.0%
!! ACACAGGATGGTGGCGGCTA+GGG + chr1_2:76808176-76808195 None:intergenic 60.0%
! ATGGCCACACAGGATGGTGG+CGG + chr1_2:76808182-76808201 None:intergenic 60.0%
! TTTTACGGCGACCACCGCTC+CGG - chr1_2:76808360-76808379 Msa0093800:three_prime_UTR 60.0%
GGTTGTGATTTCCGGAGCGG+TGG + chr1_2:76808374-76808393 None:intergenic 60.0%
GCGGACAGCGATTAGACGAC+AGG + chr1_2:76808965-76808984 None:intergenic 60.0%
GCTTGCAATCCGCCTCCATG+TGG - chr1_2:76810123-76810142 Msa0093800:intron 60.0%
GCTTGCTTTCCGCCTCCATG+TGG - chr1_2:76813482-76813501 Msa0093800:intron 60.0%
CCTTCTCTTCTCGCTACCGC+CGG - chr1_2:76815652-76815671 Msa0093800:intron 60.0%
GCAGCCACGACTCCTCTTGA+TGG - chr1_2:76817233-76817252 Msa0093800:intron 60.0%
!! ACGACGATTGGAGCGCTGCT+GGG - chr1_2:76819366-76819385 Msa0093800:intron 60.0%
GGCTCGCTCTATGCTCACCT+TGG + chr1_2:76819479-76819498 None:intergenic 60.0%
AGGTGAGCATAGAGCGAGCC+TGG - chr1_2:76819479-76819498 Msa0093800:intron 60.0%
GTTCCAGGCAGCCATAGCAG+TGG - chr1_2:76819762-76819781 Msa0093800:intron 60.0%
GATCCACTGCTATGGCTGCC+TGG + chr1_2:76819768-76819787 None:intergenic 60.0%
GGTTCATGCTCGTGCCCACA+AGG + chr1_2:76819941-76819960 None:intergenic 60.0%
!! ATGTTGGTGACGGCAAGGGC+CGG - chr1_2:76820030-76820049 Msa0093800:intron 60.0%
! CACGGCCTCTGCTTCTGGTT+CGG + chr1_2:76820073-76820092 None:intergenic 60.0%
AGAGGCCGTGAAAGATGCGG+CGG - chr1_2:76820083-76820102 Msa0093800:intron 60.0%
CGGAAAACAGAAGGCAGCGG+CGG - chr1_2:76820209-76820228 Msa0093800:five_prime_UTR 60.0%
AAAACAGAAGGCAGCGGCGG+CGG - chr1_2:76820212-76820231 Msa0093800:five_prime_UTR 60.0%
CAGCGGTTTGTGTGTCACGC+TGG - chr1_2:76820360-76820379 Msa0093800:five_prime_UTR 60.0%
!! CACACAGGATGGTGGCGGCT+AGG + chr1_2:76808177-76808196 None:intergenic 65.0%
CTAGCCGCCACCATCCTGTG+TGG - chr1_2:76808175-76808194 Msa0093800:three_prime_UTR 65.0%
CCGGCGGTAGCGAGAAGAGA+AGG + chr1_2:76815655-76815674 None:intergenic 65.0%
!! GACGACGATTGGAGCGCTGC+TGG - chr1_2:76819365-76819384 Msa0093800:intron 65.0%
!! ACGATTGGAGCGCTGCTGGG+AGG - chr1_2:76819369-76819388 Msa0093800:intron 65.0%
CTCCGCCGCCGCATCTTTCA+CGG + chr1_2:76820091-76820110 None:intergenic 65.0%
GCGGCGACCTGTTGTTGAGG+AGG - chr1_2:76820231-76820250 Msa0093800:five_prime_UTR 65.0%
TGAGGAGGAACAGGGGACGG+CGG - chr1_2:76820246-76820265 Msa0093800:five_prime_UTR 65.0%
GGCCGTGAAAGATGCGGCGG+CGG - chr1_2:76820086-76820105 Msa0093800:intron 70.0%
CGTGAAAGATGCGGCGGCGG+AGG - chr1_2:76820089-76820108 Msa0093800:intron 70.0%
TGCGGCGGCGGAGGATGACA+TGG - chr1_2:76820098-76820117 Msa0093800:intron 70.0%
GCGGCGGAGGATGACATGGC+AGG - chr1_2:76820102-76820121 Msa0093800:intron 70.0%
GCGGCGGCGACCTGTTGTTG+AGG - chr1_2:76820228-76820247 Msa0093800:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 76808108 76820505 76808108 ID=Msa0093800;Name=Msa0093800
chr1_2 mRNA 76808108 76820505 76808108 ID=Msa0093800-mRNA-1;Parent=Msa0093800;Name=Msa0093800-mRNA-1;_AED=0.10;_eAED=0.10;_QI=1006|0.66|0.76|0.84|0.41|0.30|13|1242|69
chr1_2 exon 76808108 76809324 76808108 ID=Msa0093800-mRNA-1:exon:27152;Parent=Msa0093800-mRNA-1
chr1_2 exon 76809619 76809768 76809619 ID=Msa0093800-mRNA-1:exon:27151;Parent=Msa0093800-mRNA-1
chr1_2 exon 76810199 76810206 76810199 ID=Msa0093800-mRNA-1:exon:27150;Parent=Msa0093800-mRNA-1
chr1_2 exon 76810593 76810600 76810593 ID=Msa0093800-mRNA-1:exon:27149;Parent=Msa0093800-mRNA-1
chr1_2 exon 76810748 76810810 76810748 ID=Msa0093800-mRNA-1:exon:27148;Parent=Msa0093800-mRNA-1
chr1_2 exon 76812533 76812618 76812533 ID=Msa0093800-mRNA-1:exon:27147;Parent=Msa0093800-mRNA-1
chr1_2 exon 76813814 76813898 76813814 ID=Msa0093800-mRNA-1:exon:27146;Parent=Msa0093800-mRNA-1
chr1_2 exon 76815109 76815200 76815109 ID=Msa0093800-mRNA-1:exon:27145;Parent=Msa0093800-mRNA-1
chr1_2 exon 76816539 76816607 76816539 ID=Msa0093800-mRNA-1:exon:27144;Parent=Msa0093800-mRNA-1
chr1_2 exon 76817768 76817890 76817768 ID=Msa0093800-mRNA-1:exon:27143;Parent=Msa0093800-mRNA-1
chr1_2 exon 76818468 76818565 76818468 ID=Msa0093800-mRNA-1:exon:27142;Parent=Msa0093800-mRNA-1
chr1_2 exon 76819595 76819723 76819595 ID=Msa0093800-mRNA-1:exon:27141;Parent=Msa0093800-mRNA-1
chr1_2 exon 76820176 76820505 76820176 ID=Msa0093800-mRNA-1:exon:27140;Parent=Msa0093800-mRNA-1
chr1_2 five_prime_UTR 76820176 76820505 76820176 ID=Msa0093800-mRNA-1:five_prime_utr;Parent=Msa0093800-mRNA-1
chr1_2 five_prime_UTR 76819595 76819723 76819595 ID=Msa0093800-mRNA-1:five_prime_utr;Parent=Msa0093800-mRNA-1
chr1_2 five_prime_UTR 76818468 76818565 76818468 ID=Msa0093800-mRNA-1:five_prime_utr;Parent=Msa0093800-mRNA-1
chr1_2 five_prime_UTR 76817768 76817890 76817768 ID=Msa0093800-mRNA-1:five_prime_utr;Parent=Msa0093800-mRNA-1
chr1_2 five_prime_UTR 76816539 76816607 76816539 ID=Msa0093800-mRNA-1:five_prime_utr;Parent=Msa0093800-mRNA-1
chr1_2 five_prime_UTR 76815109 76815200 76815109 ID=Msa0093800-mRNA-1:five_prime_utr;Parent=Msa0093800-mRNA-1
chr1_2 five_prime_UTR 76813814 76813898 76813814 ID=Msa0093800-mRNA-1:five_prime_utr;Parent=Msa0093800-mRNA-1
chr1_2 five_prime_UTR 76812539 76812618 76812539 ID=Msa0093800-mRNA-1:five_prime_utr;Parent=Msa0093800-mRNA-1
chr1_2 CDS 76812533 76812538 76812533 ID=Msa0093800-mRNA-1:cds;Parent=Msa0093800-mRNA-1
chr1_2 CDS 76810748 76810810 76810748 ID=Msa0093800-mRNA-1:cds;Parent=Msa0093800-mRNA-1
chr1_2 CDS 76810593 76810600 76810593 ID=Msa0093800-mRNA-1:cds;Parent=Msa0093800-mRNA-1
chr1_2 CDS 76810199 76810206 76810199 ID=Msa0093800-mRNA-1:cds;Parent=Msa0093800-mRNA-1
chr1_2 CDS 76809644 76809768 76809644 ID=Msa0093800-mRNA-1:cds;Parent=Msa0093800-mRNA-1
chr1_2 three_prime_UTR 76809619 76809643 76809619 ID=Msa0093800-mRNA-1:three_prime_utr;Parent=Msa0093800-mRNA-1
chr1_2 three_prime_UTR 76808108 76809324 76808108 ID=Msa0093800-mRNA-1:three_prime_utr;Parent=Msa0093800-mRNA-1
Gene Sequence

>Msa0093800

ATGAAGGTTGAACTTGTTATAGGGAAGGCTTTACAGGGCAACATTTTGATTTTCTTCCCACATTTTAAGGTTTGCAAGATGAGTACTTTTAATTCTCGCAAGAGTCTGAGAGAAGGAGGCTGGTTTCTTTTGATCAGGTGGTTAAGACTCAAGCTGATTGCACATGTTGGTGTAGTTGATGCTTCAAATGAAGAAAAGTACACTTTTTAG
Protein sequence

>Msa0093800

MKVELVIGKALQGNILIFFPHFKVCKMSTFNSRKSLREGGWFLLIRWLRLKLIAHVGVVDASNEEKYTF*