AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0828850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0828850 MtrunA17_Chr1g0181141 90.806 968 48 3 1 931 1 964 0.0 1555
Msa0828850 MtrunA17_Chr1g0167361 91.925 966 34 5 1 931 1 957 0.0 1551
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0828850 AT1G69070.1 49.085 929 382 14 31 923 18 891 0.0 763
Msa0828850 AT1G69070.2 48.927 932 382 14 31 923 18 894 0.0 762

Find 188 sgRNAs with CRISPR-Local

Find 584 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTCCAATGACTATCTTCT+TGG 0.180101 5_4:+1805435 None:intergenic
TTCGTCCATCACTTCCTTCT+TGG 0.198459 5_4:+1806878 None:intergenic
TCTTCACTACTGACAGTTTC+AGG 0.214470 5_4:-1800905 Msa0828850:intron
CTGCCAGTTATATCATCTTA+TGG 0.216501 5_4:-1801030 Msa0828850:intron
TGAAGAAACTATGACTAAAA+AGG 0.225009 5_4:-1805827 Msa0828850:CDS
GTTGTTCTTCTTCTTCTTGC+TGG 0.262193 5_4:+1809488 None:intergenic
TGCTTTCATGGCTACCGCTT+CGG 0.266628 5_4:+1809455 None:intergenic
TTCAAAGCTTTCATCTTGTT+TGG 0.273827 5_4:+1806632 None:intergenic
GATGAAGGGCTTGATGATTT+TGG 0.273921 5_4:-1809225 Msa0828850:CDS
GGCTCATTCTGAGGCCTTGT+TGG 0.284401 5_4:-1806666 Msa0828850:CDS
GAAGAAGAAGAACAACAAAA+TGG 0.291060 5_4:-1809481 Msa0828850:CDS
GCTTTCATGGCTACCGCTTC+GGG 0.292063 5_4:+1809456 None:intergenic
TCAAGTAGTAATCTCAAAAT+TGG 0.299845 5_4:+1800506 None:intergenic
TTCGGAGCTTCAATTATATA+AGG 0.299927 5_4:+1805388 None:intergenic
AGAATACTACTTTGAAAGAT+TGG 0.304400 5_4:-1805663 Msa0828850:CDS
ATATCACGGCCAGATGTTAT+TGG 0.309858 5_4:+1803641 None:intergenic
GCACATATTGCAGCAAAGTA+TGG 0.315156 5_4:+1803967 None:intergenic
GTAAAATGTTGGCATCTAAA+AGG 0.322254 5_4:-1799647 None:intergenic
CTTTCAGCTCGCTCACGGTC+TGG 0.326015 5_4:+1800176 None:intergenic
TTTGCAGATAATTCAGATTT+GGG 0.330476 5_4:-1807219 Msa0828850:intron
TTCTTGATGCAGCTATGTTA+AGG 0.339589 5_4:-1800213 Msa0828850:intron
TTGGATGATTTCGCCATTGT+TGG 0.340307 5_4:+1809561 None:intergenic
TTCAGTAATTTGATTGGAAC+TGG 0.357854 5_4:+1800356 None:intergenic
TTTGAAGATGAGATGCTTGA+TGG 0.376740 5_4:-1807640 Msa0828850:CDS
AATCTTCGGAGTTTATTGAT+AGG 0.376829 5_4:-1809263 Msa0828850:CDS
GAAAGTGTAAAGGGAGATAA+TGG 0.377920 5_4:-1805469 Msa0828850:CDS
TTAAGAAGTAAAACACAAAA+TGG 0.382409 5_4:-1799817 Msa0828850:three_prime_UTR
TTAGGATTCAGTAATTTGAT+TGG 0.384079 5_4:+1800350 None:intergenic
GATTCTGTTGAAAGTGTAAA+GGG 0.386577 5_4:-1805478 Msa0828850:CDS
AAAATATGCCAAATGCATTA+CGG 0.387295 5_4:-1800469 Msa0828850:CDS
AAGCATGTTCTTGCTCTTGA+AGG 0.389263 5_4:+1800003 None:intergenic
TCCATTGGCGATGCTGCGTT+TGG 0.393857 5_4:+1809542 None:intergenic
GACAATGAATAATTCTGTTC+AGG 0.394333 5_4:-1806546 Msa0828850:intron
AGGTGAGGCGCGAAGCTAAA+GGG 0.397180 5_4:-1800136 Msa0828850:CDS
AGTATCACAGGAGTCATAAC+TGG 0.397195 5_4:+1803692 None:intergenic
AAAGCAAGAGCTGAGAAGTA+TGG 0.398033 5_4:-1800041 Msa0828850:CDS
AAACAAGATGAAAGCTTTGA+AGG 0.398300 5_4:-1806630 Msa0828850:CDS
ATTACTGAATCCTAAGTTTG+AGG 0.398976 5_4:-1800342 Msa0828850:CDS
GATTTCGCCATTGTTGGGTT+TGG 0.400700 5_4:+1809567 None:intergenic
TCTTGATGCAGCTATGTTAA+GGG 0.404207 5_4:-1800212 Msa0828850:intron
TGACCAACTTGTCAGACAAA+TGG 0.412014 5_4:-1806418 Msa0828850:CDS
AGTGAAGAATGGAGAGTCTT+CGG 0.413772 5_4:+1800920 None:intergenic
GAACATTTCAGTTTAGTTGT+CGG 0.414260 5_4:-1799748 Msa0828850:three_prime_UTR
AAATATGCCAAATGCATTAC+GGG 0.415102 5_4:-1800468 Msa0828850:CDS
TCCGTACTCATCTCTATCAA+TGG 0.415890 5_4:+1803994 None:intergenic
GAGATCGCAGCGTGAACGTC+AGG 0.416024 5_4:-1809190 Msa0828850:intron
GAAGATGATGATGAGTTTGA+AGG 0.419285 5_4:-1807688 Msa0828850:CDS
GAATACTACTTTGAAAGATT+GGG 0.420352 5_4:-1805662 Msa0828850:CDS
TTAATCAATTCAACGTTCAA+TGG 0.421058 5_4:+1804030 None:intergenic
TATCACGGCCAGATGTTATT+GGG 0.421115 5_4:+1803642 None:intergenic
TCATCACCAGAGAGAGATCT+TGG 0.422739 5_4:+1805874 None:intergenic
GATGAGTTTGAAGGAATTGA+TGG 0.429378 5_4:-1807679 Msa0828850:CDS
TCCTCATTAATGCGCAATAG+TGG 0.429661 5_4:+1800990 None:intergenic
ACGAGCCAACCCCATTCGTT+TGG 0.430062 5_4:+1809344 None:intergenic
CATAATTCTTCAAAGGTCTT+CGG 0.431108 5_4:+1805370 None:intergenic
AGGCATTGATATATCCTTGT+AGG 0.432380 5_4:+1800564 None:intergenic
CATAACTGGATGTCTAAAAT+CGG 0.433346 5_4:+1803706 None:intergenic
CGTAGGAAATTCGAAGTAAT+GGG 0.434226 5_4:-1809387 Msa0828850:CDS
TTTGAAGGAATTGATGGTCT+TGG 0.436407 5_4:-1807673 Msa0828850:CDS
TCGGCTACGCCAGCTTCGCC+TGG 0.440126 5_4:+1807165 None:intergenic
AATGCCAAGAAGATAGTCAT+TGG 0.441829 5_4:-1805439 Msa0828850:CDS
CCAACCCATTCGAGTCAATC+TGG 0.442365 5_4:-1809413 Msa0828850:CDS
AGATAAGGACTTCACTTCTC+TGG 0.442591 5_4:-1806687 Msa0828850:CDS
TGGTGAAGATGATGATGATT+TGG 0.442638 5_4:-1805740 Msa0828850:CDS
AAGAGAACATCTAGAGGAGT+TGG 0.446316 5_4:-1806331 Msa0828850:CDS
GTGAAGAATGGAGAGTCTTC+GGG 0.446825 5_4:+1800921 None:intergenic
TGGATGATTTCGCCATTGTT+GGG 0.447701 5_4:+1809562 None:intergenic
GAGGAAGAAGACACTTCTTA+AGG 0.451715 5_4:-1809304 Msa0828850:CDS
GATGAAAGCTTTGAAGGCTC+TGG 0.454907 5_4:-1806624 Msa0828850:CDS
ACTTCTTAAAATAATAATGC+GGG 0.457335 5_4:+1799831 None:intergenic
ACAAGTTGGTCATATTCATC+AGG 0.458842 5_4:+1806429 None:intergenic
TCTTAATCGTCAATCGGATT+CGG 0.460470 5_4:-1805312 Msa0828850:CDS
GACCAACTTGTCAGACAAAT+GGG 0.467069 5_4:-1806417 Msa0828850:CDS
CACTTCTCTGGCTCATTCTG+AGG 0.468513 5_4:-1806675 Msa0828850:CDS
AAATCTGGACAACTAGGAAA+AGG 0.473133 5_4:-1799978 Msa0828850:CDS
TTCAGATAGGCGGAAGACTC+AGG 0.473936 5_4:-1806373 Msa0828850:CDS
CGCTGTGTCTATTGCGATTG+TGG 0.475563 5_4:-1803748 Msa0828850:CDS
ATCCCATTTGTCTGACAAGT+TGG 0.477539 5_4:+1806415 None:intergenic
GAACGAACTCAAGTTATCAT+AGG 0.478056 5_4:+1800544 None:intergenic
CTACTTCTTGCTTGATGTGA+AGG 0.483308 5_4:-1800087 Msa0828850:CDS
ATGCAGAGTCCAGGCGAAGC+TGG 0.483777 5_4:-1807174 Msa0828850:CDS
ACGTAGGAAATTCGAAGTAA+TGG 0.485316 5_4:-1809388 Msa0828850:CDS
GACTCAGGAAGAGATTGATC+AGG 0.485715 5_4:-1806358 Msa0828850:CDS
AAGAAGAAGAACAACAAAAT+GGG 0.487536 5_4:-1809480 Msa0828850:CDS
GTTGTTGCTGCTAGTTCCAT+TGG 0.489893 5_4:+1809527 None:intergenic
GGCATTGATATATCCTTGTA+GGG 0.493842 5_4:+1800565 None:intergenic
AGGTCTGAAGATTCTGATGA+TGG 0.496264 5_4:-1805715 Msa0828850:CDS
CAGATAATTCAGATTTGGGT+CGG 0.497727 5_4:-1807215 Msa0828850:CDS
TGAGTCTTCCGCCTATCTGA+AGG 0.499718 5_4:+1806375 None:intergenic
TAGAAACAGACATTCGTAGT+TGG 0.500210 5_4:+1799699 None:intergenic
TGATTCTGTTGAAAGTGTAA+AGG 0.500977 5_4:-1805479 Msa0828850:CDS
AAAGGAGATACCAAACGAAT+GGG 0.501676 5_4:-1809354 Msa0828850:CDS
ATGCGTTGCCCAATAACATC+TGG 0.502843 5_4:-1803650 Msa0828850:CDS
ACACTATCTTAATCGTCAAT+CGG 0.505513 5_4:-1805318 Msa0828850:CDS
TGAACAGAGTAACAAATCTT+CGG 0.505782 5_4:-1809277 Msa0828850:CDS
GCCACTATTGCGCATTAATG+AGG 0.509019 5_4:-1800991 Msa0828850:CDS
GAGTTTATTGATAGGCGAAT+CGG 0.509318 5_4:-1809255 Msa0828850:CDS
AAGATGGCTTGTCTGCTAAA+CGG 0.510993 5_4:-1806568 Msa0828850:CDS
GAGAAACCAAGATCTCTCTC+TGG 0.511990 5_4:-1805880 Msa0828850:CDS
CGAATCGGTGAGAATGATGA+AGG 0.515160 5_4:-1809240 Msa0828850:CDS
GAATTAATGTTAAAACTCGC+GGG 0.518164 5_4:-1799928 Msa0828850:three_prime_UTR
GAGGTGAGGCGCGAAGCTAA+AGG 0.518340 5_4:-1800137 Msa0828850:CDS
AGCCGCGGAAGAAGTTGATA+AGG 0.521425 5_4:-1805545 Msa0828850:CDS
ATGTCTGTTTCTAAATAGCA+TGG 0.524450 5_4:-1799689 Msa0828850:three_prime_UTR
AAACTGTCAGTAGTGAAGAA+TGG 0.525835 5_4:+1800909 None:intergenic
AAGGAATTGATGGTCTTGGA+AGG 0.527484 5_4:-1807669 Msa0828850:CDS
TGAAGAATTATGTTCACTAG+TGG 0.527610 5_4:-1805359 Msa0828850:CDS
CACATATTGCAGCAAAGTAT+GGG 0.528243 5_4:+1803968 None:intergenic
AGAACATCTAGAGGAGTTGG+AGG 0.530134 5_4:-1806328 Msa0828850:intron
ATGTTCTTGCTCTTGAAGGA+AGG 0.536825 5_4:+1800007 None:intergenic
AGGGAAAATGTCGAAAGAGT+TGG 0.540454 5_4:-1805416 Msa0828850:CDS
AGTCATAGTTTCTTCATCGA+CGG 0.541874 5_4:+1805834 None:intergenic
GTGACCAGATTGACTCGAAT+GGG 0.542975 5_4:+1809409 None:intergenic
AGACACAGCGTCTTTGAAGA+AGG 0.543316 5_4:+1803761 None:intergenic
TGAATTAATGTTAAAACTCG+CGG 0.549861 5_4:-1799929 Msa0828850:three_prime_UTR
TCGCACATCAATAGTATCAC+AGG 0.550865 5_4:+1803680 None:intergenic
TGGATGAACATCATACTTTG+AGG 0.551930 5_4:-1800406 Msa0828850:CDS
GGCGAAGCTGGCGTAGCCGA+CGG 0.553219 5_4:-1807162 Msa0828850:CDS
CGAGAGAAGAGATGAAGAGG+AGG 0.554549 5_4:-1805785 Msa0828850:CDS
AGTTTCTTCATCGACGGAGA+AGG 0.554848 5_4:+1805840 None:intergenic
TACTTCTTAAAATAATAATG+CGG 0.557320 5_4:+1799830 None:intergenic
TCTGGCCGTGATATTGCCGT+TGG 0.558685 5_4:-1803632 Msa0828850:CDS
TCTCTCTCTGGTGATGACCT+TGG 0.559106 5_4:-1805868 Msa0828850:CDS
GATAGTCACTTACAAAGTCA+TGG 0.562694 5_4:+1799793 None:intergenic
GAAGACGATGATATCAGTGC+TGG 0.566507 5_4:-1805598 Msa0828850:CDS
TCTCGAGAGAAGAGATGAAG+AGG 0.567993 5_4:-1805788 Msa0828850:CDS
AAGCTGGCGTAGCCGACGGT+GGG 0.570154 5_4:-1807158 Msa0828850:CDS
CCTGCTGGAAGGATTAGATA+AGG 0.573153 5_4:-1806702 Msa0828850:CDS
ACCATTGATAGAGATGAGTA+CGG 0.573361 5_4:-1803995 Msa0828850:CDS
GCTCGTAGTATGCAGAGTCC+AGG 0.573666 5_4:-1807183 Msa0828850:CDS
CTCAAAACCAAACCCAACAA+TGG 0.573761 5_4:-1809574 Msa0828850:exon
TCCAAACGCAGCATCGCCAA+TGG 0.573826 5_4:-1809543 Msa0828850:CDS
TACCTTATCAACTTCTTCCG+CGG 0.574234 5_4:+1805543 None:intergenic
CGTGACCAGATTGACTCGAA+TGG 0.575204 5_4:+1809408 None:intergenic
GAAGCTGGCGTAGCCGACGG+TGG 0.575891 5_4:-1807159 Msa0828850:CDS
GTTCTCTTGCTATTGAGAAG+AGG 0.577774 5_4:-1809323 Msa0828850:CDS
GATGATGATGATATCAGTGC+AGG 0.578213 5_4:-1805631 Msa0828850:CDS
AGATACCAAACGAATGGGGT+TGG 0.579161 5_4:-1809349 Msa0828850:CDS
GGTGAGGCGCGAAGCTAAAG+GGG 0.580163 5_4:-1800135 Msa0828850:CDS
CAAGAGCTGAGAAGTATGGA+AGG 0.580782 5_4:-1800037 Msa0828850:CDS
GAAAGGAGATACCAAACGAA+TGG 0.581321 5_4:-1809355 Msa0828850:CDS
GCCAAGAAGATAGTCATTGG+AGG 0.581374 5_4:-1805436 Msa0828850:CDS
TCAGGAAGAGATTGATCAGG+AGG 0.581593 5_4:-1806355 Msa0828850:CDS
ACGGGATAAAATTAAAGATG+TGG 0.582762 5_4:-1800450 Msa0828850:CDS
TTCACTCGAATCTTCAGCAG+CGG 0.584454 5_4:+1805936 None:intergenic
TAAAACCAAGAAGGAAGTGA+TGG 0.586650 5_4:-1806883 Msa0828850:CDS
TAGTGAACATAATTCTTCAA+AGG 0.586872 5_4:+1805363 None:intergenic
CTTCTTAAAATAATAATGCG+GGG 0.594869 5_4:+1799832 None:intergenic
GAGTCTTCCGCCTATCTGAA+GGG 0.595781 5_4:+1806376 None:intergenic
CCAAGAAGATAGTCATTGGA+GGG 0.596888 5_4:-1805435 Msa0828850:CDS
CCTTATCTAATCCTTCCAGC+AGG 0.597560 5_4:+1806702 None:intergenic
ATCGGAACATGGAAATACCA+TGG 0.602060 5_4:+1803724 None:intergenic
CTATCACAGAAAGTAGCAGT+TGG 0.602687 5_4:-1803784 Msa0828850:intron
TTCTTAAAATAATAATGCGG+GGG 0.602816 5_4:+1799833 None:intergenic
TCTATTGCGATTGTGGTCCA+TGG 0.603912 5_4:-1803741 Msa0828850:CDS
AGCTGGCGTAGCCGACGGTG+GGG 0.605501 5_4:-1807157 Msa0828850:CDS
GGAGGAAAGAGAACATCTAG+AGG 0.609657 5_4:-1806337 Msa0828850:CDS
AAGAACCAACGGCAATATCA+CGG 0.614085 5_4:+1803627 None:intergenic
ACAGAGACATAAAACCAAGA+AGG 0.615445 5_4:-1806892 Msa0828850:intron
TCCTTGTAGGGTTTCAACAG+CGG 0.615747 5_4:+1800577 None:intergenic
AAAGATGAAGACCTGCTGGA+AGG 0.616144 5_4:-1806713 Msa0828850:CDS
ACCGCTGTTGAAACCCTACA+AGG 0.620068 5_4:-1800578 Msa0828850:CDS
GTGTCTGCTAAGTAAAATGT+TGG 0.625975 5_4:-1799658 Msa0828850:three_prime_UTR
AGGAATTGATGGTCTTGGAA+GGG 0.625979 5_4:-1807668 Msa0828850:CDS
TGCGTGCTCGCCCTTCAGAT+AGG 0.630079 5_4:-1806386 Msa0828850:CDS
TGGTTCAGTCAGAGCCAACA+AGG 0.630538 5_4:+1806652 None:intergenic
TCGAAGTAATGGGTCAGAAG+CGG 0.631084 5_4:-1809377 Msa0828850:CDS
TGGTTCAGAAGACGAAGATG+AGG 0.638131 5_4:-1805578 Msa0828850:CDS
GGATGTCTAAAATCGGAACA+TGG 0.639818 5_4:+1803713 None:intergenic
GAGAGAAGAGATGAAGAGGA+GGG 0.645634 5_4:-1805784 Msa0828850:CDS
TGAGCTGATTAAGTTGAAAG+TGG 0.649315 5_4:-1800426 Msa0828850:CDS
TGAGGCGACCACTTCAAATG+CGG 0.651913 5_4:-1800388 Msa0828850:CDS
GTAATGGGTCAGAAGCGGAA+AGG 0.654267 5_4:-1809372 Msa0828850:CDS
TCTTCTAGTGAAGATGATGA+TGG 0.654306 5_4:-1805760 Msa0828850:CDS
AATTAATGTTAAAACTCGCG+GGG 0.655320 5_4:-1799927 Msa0828850:three_prime_UTR
AGAACATAAGAAAGAACCAA+CGG 0.656060 5_4:+1803616 None:intergenic
TGAGGATGAAGAAAGAGCCG+CGG 0.658294 5_4:-1805560 Msa0828850:CDS
AAGATGATGATGATTTGGAA+AGG 0.659962 5_4:-1805735 Msa0828850:CDS
TCGAGTCAATCTGGTCACGT+AGG 0.664541 5_4:-1809404 Msa0828850:CDS
CCAGATTGACTCGAATGGGT+TGG 0.666324 5_4:+1809413 None:intergenic
AGATTCTGATGATGGATCAG+AGG 0.668735 5_4:-1805707 Msa0828850:CDS
GAATCGGTGAGAATGATGAA+GGG 0.669136 5_4:-1809239 Msa0828850:CDS
CAACAAAATGGGTCCCGAAG+CGG 0.671592 5_4:-1809469 Msa0828850:CDS
GAAATGTTCAGATTCTCTCG+AGG 0.678407 5_4:+1799762 None:intergenic
CGACGGAGAAGGAATCGCCA+AGG 0.679772 5_4:+1805851 None:intergenic
GTGCTCGCCCTTCAGATAGG+CGG 0.701979 5_4:-1806383 Msa0828850:CDS
AAGGAGATACCAAACGAATG+GGG 0.713699 5_4:-1809353 Msa0828850:CDS
AATGAGAAAACAATTGCACG+AGG 0.742746 5_4:+1809679 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG + chr5_4:1806411-1806430 None:intergenic 0.0%
!!! AAAACAATATAACTTTATTT+TGG + chr5_4:1801100-1801119 None:intergenic 10.0%
!!! AAGATTTTAGAATATTAAAT+AGG - chr5_4:1807382-1807401 Msa0828850:intron 10.0%
!!! AGATTTTAGAATATTAAATA+GGG - chr5_4:1807383-1807402 Msa0828850:intron 10.0%
!!! TTTTGTGTGTAAAATAAAAT+TGG + chr5_4:1799714-1799733 None:intergenic 15.0%
!! TGGATTTAACAATTAATTTA+AGG - chr5_4:1800418-1800437 Msa0828850:CDS 15.0%
!!! TTAATCTTTTGCTATATAAA+TGG + chr5_4:1800472-1800491 None:intergenic 15.0%
!!! ATTTACTTTTTTTTCAATTG+AGG - chr5_4:1800619-1800638 Msa0828850:intron 15.0%
!! AAAAGAAGCAAAAAAAAAAT+CGG + chr5_4:1801984-1802003 None:intergenic 15.0%
!! GATATATAAGAAAATAGTAA+CGG + chr5_4:1802271-1802290 None:intergenic 15.0%
!! TTAATATAACAGTTAAAACT+CGG + chr5_4:1804252-1804271 None:intergenic 15.0%
!!! TGTTATATTAAACTTTTATG+TGG - chr5_4:1804261-1804280 Msa0828850:intron 15.0%
!!! AACTTGTTTTAATTAGTTTT+GGG + chr5_4:1804961-1804980 None:intergenic 15.0%
!!! GTTTAATTTGAAAATGTTAA+TGG - chr5_4:1805046-1805065 Msa0828850:intron 15.0%
!!! CTTACTTTTAAAAATTTTGT+AGG - chr5_4:1805821-1805840 Msa0828850:CDS 15.0%
!! ATTTGTAACAAAAAACTTAA+TGG + chr5_4:1805896-1805915 None:intergenic 15.0%
!!! TTAAGTTTTTTGTTACAAAT+TGG - chr5_4:1805896-1805915 Msa0828850:CDS 15.0%
!!! AAGTTTTTTTTGTTACAAAT+TGG + chr5_4:1806335-1806354 None:intergenic 15.0%
!! TTGTAACAAAAAAAACTTAA+AGG - chr5_4:1806337-1806356 Msa0828850:CDS 15.0%
!!! TATAGTTTTACATAAAGAAT+TGG + chr5_4:1806519-1806538 None:intergenic 15.0%
!! AAAGTTTGAATAAATACTAT+TGG + chr5_4:1806745-1806764 None:intergenic 15.0%
!!! TTTTTATAGTATACAAGTAT+AGG + chr5_4:1807133-1807152 None:intergenic 15.0%
!!! ATATTAAATAGGGTTATTTT+TGG - chr5_4:1807393-1807412 Msa0828850:intron 15.0%
!! TGATAAATATCAAACTAATT+TGG - chr5_4:1807434-1807453 Msa0828850:intron 15.0%
!! TACACATAATATTAATGATA+CGG - chr5_4:1807462-1807481 Msa0828850:intron 15.0%
!!! ATATCTTATCTGTATTTTAA+GGG + chr5_4:1807839-1807858 None:intergenic 15.0%
!!! AATATCTTATCTGTATTTTA+AGG + chr5_4:1807840-1807859 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr5_4:1808074-1808093 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr5_4:1808073-1808092 Msa0828850:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr5_4:1808097-1808116 Msa0828850:intron 15.0%
!! AGAAAAAGTTATTATTACAT+TGG - chr5_4:1808160-1808179 Msa0828850:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - chr5_4:1808200-1808219 Msa0828850:intron 15.0%
!! AATCATAATTAGAAAAGATA+TGG + chr5_4:1808741-1808760 None:intergenic 15.0%
!! AAATTGGTAAAAATATTTCT+GGG + chr5_4:1808848-1808867 None:intergenic 15.0%
!! AAAATTGGTAAAAATATTTC+TGG + chr5_4:1808849-1808868 None:intergenic 15.0%
!! TACTTCTTAAAATAATAATG+CGG + chr5_4:1809540-1809559 None:intergenic 15.0%
!! GCTATTTATCAAAATATCAA+TGG + chr5_4:1800228-1800247 None:intergenic 20.0%
!! ATTTCTGTGAAATTGATTAT+AGG - chr5_4:1800357-1800376 Msa0828850:CDS 20.0%
!! TTGACTAAAAAAAAACTGTT+TGG + chr5_4:1800749-1800768 None:intergenic 20.0%
!!! ACTGTTTTCATAATTTATCT+TGG + chr5_4:1800961-1800980 None:intergenic 20.0%
!!! AAGTCAATTTGTTTTCATAT+AGG + chr5_4:1800989-1801008 None:intergenic 20.0%
!! CATTATTCACAAAAATTTCA+AGG + chr5_4:1801587-1801606 None:intergenic 20.0%
!! TACCTAATATAACATGTTAA+TGG - chr5_4:1801798-1801817 Msa0828850:intron 20.0%
!!! TTTTTTTTTGCTTCTTTTTC+TGG - chr5_4:1801986-1802005 Msa0828850:intron 20.0%
!! TAAAATAAACAGTATGAACA+TGG + chr5_4:1802042-1802061 None:intergenic 20.0%
!! CATTTGTGAAAAGTTTAAAA+AGG + chr5_4:1802405-1802424 None:intergenic 20.0%
!! AATGAAAAAAGTGATAAAGA+TGG - chr5_4:1802783-1802802 Msa0828850:intron 20.0%
!! CTTATAAAAAGAAGATATCA+GGG + chr5_4:1802878-1802897 None:intergenic 20.0%
!! TCTTATAAAAAGAAGATATC+AGG + chr5_4:1802879-1802898 None:intergenic 20.0%
!! ATCCATAATTTCAGAAAAAA+CGG - chr5_4:1803395-1803414 Msa0828850:intron 20.0%
!! TAATATAACAGTTAAAACTC+GGG + chr5_4:1804251-1804270 None:intergenic 20.0%
!!! TATTCTATTTACAATTTTGC+TGG - chr5_4:1804424-1804443 Msa0828850:intron 20.0%
!! CTAGAAAAAGAAAAAAAAAG+GGG + chr5_4:1804853-1804872 None:intergenic 20.0%
!! CCTAGAAAAAGAAAAAAAAA+GGG + chr5_4:1804854-1804873 None:intergenic 20.0%
!! TCCTAGAAAAAGAAAAAAAA+AGG + chr5_4:1804855-1804874 None:intergenic 20.0%
!!! AATGTTTTGTGGTATTTTAA+TGG + chr5_4:1804899-1804918 None:intergenic 20.0%
!!! CTTTATTACAAAATGTTTTG+TGG + chr5_4:1804910-1804929 None:intergenic 20.0%
!!! GAACTTGTTTTAATTAGTTT+TGG + chr5_4:1804962-1804981 None:intergenic 20.0%
!! TGATATAATCTAGTTAATAG+AGG - chr5_4:1804995-1805014 Msa0828850:intron 20.0%
!! AAGTTCCTCATAAAATATTT+AGG + chr5_4:1805207-1805226 None:intergenic 20.0%
!!! TTTGTTGAGAGTATAAAAAA+CGG - chr5_4:1805454-1805473 Msa0828850:CDS 20.0%
!! ATAGTTCTTGATAAAAGTTA+AGG + chr5_4:1805519-1805538 None:intergenic 20.0%
!!! TTTTATCAAGAACTATGAAT+TGG - chr5_4:1805523-1805542 Msa0828850:CDS 20.0%
!! TGTAACAGAAAAAACTTAAA+AGG + chr5_4:1805923-1805942 None:intergenic 20.0%
!! TTATGGATCATTTAACATTA+AGG - chr5_4:1806014-1806033 Msa0828850:intron 20.0%
!! GTAAGTAATCATGTTTAATA+AGG + chr5_4:1806061-1806080 None:intergenic 20.0%
!!! CAGATATTTTATGACTTAAA+AGG - chr5_4:1806308-1806327 Msa0828850:intron 20.0%
!! GTTATAAACATCTAACTTAA+AGG - chr5_4:1806368-1806387 Msa0828850:CDS 20.0%
!!! CTTTCTAAGATCTTTTTTAT+TGG - chr5_4:1806583-1806602 Msa0828850:CDS 20.0%
!!! AAAAAAGAAATTGCTGTTTA+CGG - chr5_4:1807169-1807188 Msa0828850:CDS 20.0%
!! AAAATCAATATAGAATACAC+TGG + chr5_4:1807588-1807607 None:intergenic 20.0%
!! AGTTAATTAGGTCATATATT+TGG + chr5_4:1807661-1807680 None:intergenic 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - chr5_4:1808040-1808059 Msa0828850:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr5_4:1808083-1808102 None:intergenic 20.0%
!!! TAACATTTTTCTTGCAAAAA+AGG + chr5_4:1808506-1808525 None:intergenic 20.0%
!! GCTATGATAACAAATATAAA+TGG + chr5_4:1808629-1808648 None:intergenic 20.0%
!!! AATTATGATTTTTCGTTTAC+AGG - chr5_4:1808751-1808770 Msa0828850:intron 20.0%
!!! ATTATGATTTTTCGTTTACA+GGG - chr5_4:1808752-1808771 Msa0828850:intron 20.0%
!! ACTTCTTAAAATAATAATGC+GGG + chr5_4:1809539-1809558 None:intergenic 20.0%
!! TTAAGAAGTAAAACACAAAA+TGG - chr5_4:1809550-1809569 Msa0828850:CDS 20.0%
! AAGAAGAAGAACAACAAAAT+GGG - chr5_4:1799887-1799906 Msa0828850:three_prime_UTR 25.0%
! ATCAAAATATCAATGGTGAA+GGG + chr5_4:1800221-1800240 None:intergenic 25.0%
! TATCAAAATATCAATGGTGA+AGG + chr5_4:1800222-1800241 None:intergenic 25.0%
! TGTATAAGCCATATATGTAA+AGG - chr5_4:1800395-1800414 Msa0828850:CDS 25.0%
! TAAATCCACCTTTACATATA+TGG + chr5_4:1800406-1800425 None:intergenic 25.0%
! TCAAATAAGTCAATCTAAAC+AGG + chr5_4:1800834-1800853 None:intergenic 25.0%
! AATTTATCTTGGAGAACTTA+TGG + chr5_4:1800950-1800969 None:intergenic 25.0%
!! TTGTTTTCATGAGATATCTT+GGG - chr5_4:1801134-1801153 Msa0828850:intron 25.0%
!!! ATTTCACCTTATTTTCATCA+AGG + chr5_4:1801162-1801181 None:intergenic 25.0%
! CTAAAATAAGTGAATCCAAA+CGG - chr5_4:1801259-1801278 Msa0828850:intron 25.0%
! TAAAATAAGTGAATCCAAAC+GGG - chr5_4:1801260-1801279 Msa0828850:intron 25.0%
!! TCTCTAAAAGAGAATTGAAA+CGG - chr5_4:1801539-1801558 Msa0828850:intron 25.0%
!! TGTGAATAATGACTGTTTTA+TGG - chr5_4:1801596-1801615 Msa0828850:intron 25.0%
! CACCATTAACATGTTATATT+AGG + chr5_4:1801803-1801822 None:intergenic 25.0%
!! TTTGGTTATTTGTGAACTTT+TGG - chr5_4:1801910-1801929 Msa0828850:intron 25.0%
!! TTGGTTATTTGTGAACTTTT+GGG - chr5_4:1801911-1801930 Msa0828850:intron 25.0%
! AGTCACAAAAATAACACAAT+AGG + chr5_4:1802107-1802126 None:intergenic 25.0%
!! TTTTGCAGATAATTCAGATT+TGG - chr5_4:1802147-1802166 Msa0828850:intron 25.0%
! TTTGCAGATAATTCAGATTT+GGG - chr5_4:1802148-1802167 Msa0828850:intron 25.0%
! ATATTCCAACTTTCTCTTTA+TGG - chr5_4:1802906-1802925 Msa0828850:intron 25.0%
! TGAAGAAACTATGACTAAAA+AGG - chr5_4:1803540-1803559 Msa0828850:intron 25.0%
! GAAGAAACTATGACTAAAAA+GGG - chr5_4:1803541-1803560 Msa0828850:intron 25.0%
!! AGAATACTACTTTGAAAGAT+TGG - chr5_4:1803704-1803723 Msa0828850:CDS 25.0%
!! GAATACTACTTTGAAAGATT+GGG - chr5_4:1803705-1803724 Msa0828850:CDS 25.0%
! AAGGTAAAAAGATTGAATGT+TGG - chr5_4:1803841-1803860 Msa0828850:intron 25.0%
! TAGTGAACATAATTCTTCAA+AGG + chr5_4:1804007-1804026 None:intergenic 25.0%
! TAATTTGATTCAAATCTCCA+TGG - chr5_4:1804155-1804174 Msa0828850:intron 25.0%
! AACTCAACTGTGTAAATATA+GGG - chr5_4:1804338-1804357 Msa0828850:intron 25.0%
! GAAATTGAGAGAAAAAGAAT+TGG - chr5_4:1804793-1804812 Msa0828850:intron 25.0%
!!! CCCTTTTTTTTTCTTTTTCT+AGG - chr5_4:1804851-1804870 Msa0828850:intron 25.0%
!!! ATTTTAATGGTTGTTAACCA+GGG + chr5_4:1804886-1804905 None:intergenic 25.0%
!!! TATTTTAATGGTTGTTAACC+AGG + chr5_4:1804887-1804906 None:intergenic 25.0%
! ATAATCTAGTTAATAGAGGT+TGG - chr5_4:1804999-1805018 Msa0828850:intron 25.0%
!! AATAGACTATTTTGCTTAGT+TGG - chr5_4:1805153-1805172 Msa0828850:intron 25.0%
!! CTGTTCCTAAATATTTTATG+AGG - chr5_4:1805199-1805218 Msa0828850:intron 25.0%
!!! TTCTCTTTTCAGGTATTTTA+TGG - chr5_4:1805274-1805293 Msa0828850:CDS 25.0%
! TTAATCAATTCAACGTTCAA+TGG + chr5_4:1805340-1805359 None:intergenic 25.0%
! TAGTTGAAAAAAATGGGTAA+CGG + chr5_4:1805977-1805996 None:intergenic 25.0%
! CGAAGTTAGTTGAAAAAAAT+GGG + chr5_4:1805983-1806002 None:intergenic 25.0%
! ACGAAGTTAGTTGAAAAAAA+TGG + chr5_4:1805984-1806003 None:intergenic 25.0%
! GTTTGATGAAAATATGACAA+TGG - chr5_4:1806283-1806302 Msa0828850:intron 25.0%
!!! CACTTTTTAATGGTAGAAAT+CGG + chr5_4:1806488-1806507 None:intergenic 25.0%
!! GTTTTACATAAAGAATTGGT+AGG + chr5_4:1806515-1806534 None:intergenic 25.0%
!!! TGAATAAATACTATTGGTTC+AGG + chr5_4:1806739-1806758 None:intergenic 25.0%
! TGATATATGTTTACTTTCAC+TGG + chr5_4:1806779-1806798 None:intergenic 25.0%
! TAAATACAAACATATGTGCA+TGG + chr5_4:1806881-1806900 None:intergenic 25.0%
! TGTTTGTATTTATTTGTGTG+TGG - chr5_4:1806889-1806908 Msa0828850:CDS 25.0%
!! CATTTTCTTGTATATTCTAC+TGG - chr5_4:1807065-1807084 Msa0828850:intron 25.0%
!!! ACAGCAATTTCTTTTTTTAC+TGG + chr5_4:1807166-1807185 None:intergenic 25.0%
! AGAAACTAATTGCTGAAAAA+GGG - chr5_4:1807324-1807343 Msa0828850:intron 25.0%
!!! ATAGGGTTATTTTTGGAATT+TGG - chr5_4:1807400-1807419 Msa0828850:intron 25.0%
! TGTTTCATAAAACCTTTCAT+TGG - chr5_4:1807750-1807769 Msa0828850:intron 25.0%
! TTCAAAACAACATTAAAGGT+AGG + chr5_4:1807792-1807811 None:intergenic 25.0%
! ACGTTTCAAAACAACATTAA+AGG + chr5_4:1807796-1807815 None:intergenic 25.0%
!!! AGAGTTTTTTGTGAACTTAA+AGG + chr5_4:1807882-1807901 None:intergenic 25.0%
!! TATTTGAGATTGATATGTGA+AGG - chr5_4:1807913-1807932 Msa0828850:intron 25.0%
! CAAAAAAGGTGGTAATAAAT+TGG + chr5_4:1808492-1808511 None:intergenic 25.0%
! GATTGACTACAAAAATATCA+TGG + chr5_4:1808532-1808551 None:intergenic 25.0%
! TGATAACAAATATAAATGGC+AGG + chr5_4:1808625-1808644 None:intergenic 25.0%
! CTATGATCTTATAACTGATA+TGG - chr5_4:1808648-1808667 Msa0828850:intron 25.0%
!!! GAAATGTTTTTCAAATACTG+TGG - chr5_4:1808713-1808732 Msa0828850:intron 25.0%
! TCAAGTAGTAATCTCAAAAT+TGG + chr5_4:1808864-1808883 None:intergenic 25.0%
! AAAATATGCCAAATGCATTA+CGG - chr5_4:1808898-1808917 Msa0828850:intron 25.0%
! TTAGGATTCAGTAATTTGAT+TGG + chr5_4:1809020-1809039 None:intergenic 25.0%
! CATATTACCAAATTGAAACA+TGG + chr5_4:1809072-1809091 None:intergenic 25.0%
! AAGAAAAAAATTGAAGAGAG+AGG - chr5_4:1809211-1809230 Msa0828850:CDS 25.0%
! TGAATTAATGTTAAAACTCG+CGG - chr5_4:1809438-1809457 Msa0828850:CDS 25.0%
! TTCTTAAAATAATAATGCGG+GGG + chr5_4:1809537-1809556 None:intergenic 25.0%
! CTTCTTAAAATAATAATGCG+GGG + chr5_4:1809538-1809557 None:intergenic 25.0%
GAGGGGAAAAATAAAGAAAA+GGG + chr5_4:1799653-1799672 None:intergenic 30.0%
AGAGGGGAAAAATAAAGAAA+AGG + chr5_4:1799654-1799673 None:intergenic 30.0%
AGGTAGAGAAGAAAAAAAGA+GGG + chr5_4:1799671-1799690 None:intergenic 30.0%
GAAGAAGAAGAACAACAAAA+TGG - chr5_4:1799886-1799905 Msa0828850:three_prime_UTR 30.0%
!! TTTTTGAGCTTTTGCTTTCA+TGG + chr5_4:1799927-1799946 None:intergenic 30.0%
TGAACAGAGTAACAAATCTT+CGG - chr5_4:1800090-1800109 Msa0828850:CDS 30.0%
AATCTTCGGAGTTTATTGAT+AGG - chr5_4:1800104-1800123 Msa0828850:CDS 30.0%
ATAAGCCATATATGTAAAGG+TGG - chr5_4:1800398-1800417 Msa0828850:CDS 30.0%
CAAAAGATTAAGACTCTGAT+TGG - chr5_4:1800481-1800500 Msa0828850:CDS 30.0%
!!! CTAATTGAATTTGTCGCTTT+TGG - chr5_4:1800532-1800551 Msa0828850:CDS 30.0%
!!! TTGTCGCTTTTGGTAAAATT+AGG - chr5_4:1800542-1800561 Msa0828850:CDS 30.0%
!!! TGTCGCTTTTGGTAAAATTA+GGG - chr5_4:1800543-1800562 Msa0828850:CDS 30.0%
!!! TTTTTTCAATTGAGGCTACA+AGG - chr5_4:1800627-1800646 Msa0828850:intron 30.0%
!! TTTTTCAATTGAGGCTACAA+GGG - chr5_4:1800628-1800647 Msa0828850:intron 30.0%
TTTAGTCAAATGAGCTTAGA+AGG - chr5_4:1800760-1800779 Msa0828850:intron 30.0%
ACTTATTTGAGCTTATCTAC+TGG - chr5_4:1800844-1800863 Msa0828850:intron 30.0%
!! GTTGTTTTCATGAGATATCT+TGG - chr5_4:1801133-1801152 Msa0828850:intron 30.0%
! TGTTTTCATGAGATATCTTG+GGG - chr5_4:1801135-1801154 Msa0828850:intron 30.0%
TACAATCAAACAAACCCATT+AGG + chr5_4:1801287-1801306 None:intergenic 30.0%
! TGTTATCGCTTTGAGTTTAA+TGG - chr5_4:1801341-1801360 Msa0828850:intron 30.0%
! GTTATCGCTTTGAGTTTAAT+GGG - chr5_4:1801342-1801361 Msa0828850:intron 30.0%
! TTATCGCTTTGAGTTTAATG+GGG - chr5_4:1801343-1801362 Msa0828850:intron 30.0%
CGAAATACTTGATTCTCATT+AGG - chr5_4:1801453-1801472 Msa0828850:intron 30.0%
GGACGAAAATTCAAAAAACA+AGG + chr5_4:1801566-1801585 None:intergenic 30.0%
TTTGAACTCTAATGAGCTAT+TGG - chr5_4:1801848-1801867 Msa0828850:intron 30.0%
AATTATGTGCATGCTGAATT+TGG - chr5_4:1801892-1801911 Msa0828850:intron 30.0%
! TGGTTATTTGTGAACTTTTG+GGG - chr5_4:1801912-1801931 Msa0828850:intron 30.0%
!!! TTTTTTGCTTCTTTTTCTGG+TGG - chr5_4:1801989-1802008 Msa0828850:intron 30.0%
AGATAGAGCAAAATAGAAGA+CGG + chr5_4:1802066-1802085 None:intergenic 30.0%
! AGATTACACAAAGCATTCAT+GGG + chr5_4:1802329-1802348 None:intergenic 30.0%
ATTTCTGTTTGAGTGACTAT+AGG - chr5_4:1802356-1802375 Msa0828850:intron 30.0%
TTTCTGTTTGAGTGACTATA+GGG - chr5_4:1802357-1802376 Msa0828850:intron 30.0%
! TGCAAAAAGCAAGTTTTACA+AGG - chr5_4:1802517-1802536 Msa0828850:intron 30.0%
! CTTTCACTCTAATATTTTCC+AGG - chr5_4:1802608-1802627 Msa0828850:intron 30.0%
TTCAAAGCTTTCATCTTGTT+TGG + chr5_4:1802738-1802757 None:intergenic 30.0%
! AAACAAGATGAAAGCTTTGA+AGG - chr5_4:1802737-1802756 Msa0828850:intron 30.0%
GACAATGAATAATTCTGTTC+AGG - chr5_4:1802821-1802840 Msa0828850:intron 30.0%
!!! TGCCGTTTTTTCTGAAATTA+TGG + chr5_4:1803400-1803419 None:intergenic 30.0%
AAACTATGACTAAAAAGGGT+TGG - chr5_4:1803545-1803564 Msa0828850:intron 30.0%
AACTATGACTAAAAAGGGTT+GGG - chr5_4:1803546-1803565 Msa0828850:intron 30.0%
! AAGATGATGATGATTTGGAA+AGG - chr5_4:1803632-1803651 Msa0828850:CDS 30.0%
! TGATTCTGTTGAAAGTGTAA+AGG - chr5_4:1803888-1803907 Msa0828850:intron 30.0%
! GATTCTGTTGAAAGTGTAAA+GGG - chr5_4:1803889-1803908 Msa0828850:intron 30.0%
TTCGGAGCTTCAATTATATA+AGG + chr5_4:1803982-1804001 None:intergenic 30.0%
CATAATTCTTCAAAGGTCTT+CGG + chr5_4:1804000-1804019 None:intergenic 30.0%
TGAAGAATTATGTTCACTAG+TGG - chr5_4:1804008-1804027 Msa0828850:CDS 30.0%
ACACTATCTTAATCGTCAAT+CGG - chr5_4:1804049-1804068 Msa0828850:CDS 30.0%
!! TATTTACACAGTTGAGTTGA+GGG + chr5_4:1804336-1804355 None:intergenic 30.0%
! ATATTTACACAGTTGAGTTG+AGG + chr5_4:1804337-1804356 None:intergenic 30.0%
CAACTCAACTGTGTAAATAT+AGG - chr5_4:1804337-1804356 Msa0828850:intron 30.0%
TTGAATGAAATCCTAGTTTG+CGG - chr5_4:1804380-1804399 Msa0828850:intron 30.0%
ACAGTAATCAGTCTCATATA+GGG + chr5_4:1804463-1804482 None:intergenic 30.0%
AACAGTAATCAGTCTCATAT+AGG + chr5_4:1804464-1804483 None:intergenic 30.0%
AGACAAACTAAGAGAAATGA+GGG - chr5_4:1804504-1804523 Msa0828850:intron 30.0%
ATGAGAAATCAGAATGAAGA+GGG + chr5_4:1804576-1804595 None:intergenic 30.0%
TATGAGAAATCAGAATGAAG+AGG + chr5_4:1804577-1804596 None:intergenic 30.0%
GTCAGTTTAGCTAATTTAGT+GGG + chr5_4:1804640-1804659 None:intergenic 30.0%
TGTCAGTTTAGCTAATTTAG+TGG + chr5_4:1804641-1804660 None:intergenic 30.0%
GGTATTGTCAATGGAATTAA+TGG + chr5_4:1804752-1804771 None:intergenic 30.0%
! TCAATTTCTACAAGTCTTGT+AGG + chr5_4:1804781-1804800 None:intergenic 30.0%
AAAGAATTGGTCAACAGATA+TGG - chr5_4:1804806-1804825 Msa0828850:intron 30.0%
! TTTTAATGGTTGTTAACCAG+GGG + chr5_4:1804885-1804904 None:intergenic 30.0%
! TAAATCTGAGTATTGCAAAC+TGG + chr5_4:1805134-1805153 None:intergenic 30.0%
AATACCTGAAAAGAGAAGTA+CGG + chr5_4:1805271-1805290 None:intergenic 30.0%
!!! ATTGCAGTATTTTGCTGTTT+TGG - chr5_4:1805303-1805322 Msa0828850:CDS 30.0%
! CATAACTGGATGTCTAAAAT+CGG + chr5_4:1805664-1805683 None:intergenic 30.0%
AGAACATAAGAAAGAACCAA+CGG + chr5_4:1805754-1805773 None:intergenic 30.0%
GTTATAAACGTCGAACTTAA+AGG + chr5_4:1805865-1805884 None:intergenic 30.0%
ACTTCGTTAAATAGTGCTTA+TGG - chr5_4:1805997-1806016 Msa0828850:intron 30.0%
TGGATCATTTAACATTAAGG+TGG - chr5_4:1806017-1806036 Msa0828850:intron 30.0%
TCATTTAACATTAAGGTGGT+AGG - chr5_4:1806021-1806040 Msa0828850:intron 30.0%
GTGGATGTTTAATCTTAAGT+TGG + chr5_4:1806244-1806263 None:intergenic 30.0%
CGATTTCTACCATTAAAAAG+TGG - chr5_4:1806486-1806505 Msa0828850:intron 30.0%
! CTACTAATGAATTTAGCCTT+TGG - chr5_4:1806553-1806572 Msa0828850:CDS 30.0%
AAAAAGATCTTAGAAAGCAG+AGG + chr5_4:1806580-1806599 None:intergenic 30.0%
ATGCCATCAATGAAAAACAT+AGG + chr5_4:1806652-1806671 None:intergenic 30.0%
TTATATTCATTGTGTGAGCA+AGG + chr5_4:1806682-1806701 None:intergenic 30.0%
ACACAATGAATATAAAACGC+AGG - chr5_4:1806687-1806706 Msa0828850:CDS 30.0%
TATATCATGCGAAAATTCTC+AGG - chr5_4:1806792-1806811 Msa0828850:intron 30.0%
ACTAACGAAAAAGAACAAAG+GGG + chr5_4:1807093-1807112 None:intergenic 30.0%
CACTAACGAAAAAGAACAAA+GGG + chr5_4:1807094-1807113 None:intergenic 30.0%
ACACTAACGAAAAAGAACAA+AGG + chr5_4:1807095-1807114 None:intergenic 30.0%
AAAATTTCCATTAGAGACGT+AGG + chr5_4:1807297-1807316 None:intergenic 30.0%
GAGAAACTAATTGCTGAAAA+AGG - chr5_4:1807323-1807342 Msa0828850:intron 30.0%
GAAACTAATTGCTGAAAAAG+GGG - chr5_4:1807325-1807344 Msa0828850:intron 30.0%
ATATTAATGATACGGACTTC+TGG - chr5_4:1807470-1807489 Msa0828850:intron 30.0%
TAATATTAAGTGCGAGATCA+TGG + chr5_4:1807627-1807646 None:intergenic 30.0%
TGTTGGGGTAAAAGTTAATT+AGG + chr5_4:1807673-1807692 None:intergenic 30.0%
TAATGAAACACAATCTGTTG+GGG + chr5_4:1807688-1807707 None:intergenic 30.0%
CTAATGAAACACAATCTGTT+GGG + chr5_4:1807689-1807708 None:intergenic 30.0%
TCTAATGAAACACAATCTGT+TGG + chr5_4:1807690-1807709 None:intergenic 30.0%
!! ACTGATTTTCATCCAATGAA+AGG + chr5_4:1807765-1807784 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr5_4:1807991-1808010 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr5_4:1807992-1808011 Msa0828850:intron 30.0%
! TGTGCAGAGTATTAATTAGA+GGG - chr5_4:1808126-1808145 Msa0828850:intron 30.0%
AGAGAGTAATATCATGCATA+TGG - chr5_4:1808249-1808268 Msa0828850:intron 30.0%
ATTATCCAACCATAACATTC+TGG + chr5_4:1808295-1808314 None:intergenic 30.0%
GTTCCATAAGATGATATAAC+TGG + chr5_4:1808343-1808362 None:intergenic 30.0%
! CATTTTTCTTGCAAAAAAGG+TGG + chr5_4:1808503-1808522 None:intergenic 30.0%
TGACTACAAAAATATCATGG+TGG + chr5_4:1808529-1808548 None:intergenic 30.0%
TTGAACAAAGAAAATAGCAG+CGG - chr5_4:1808565-1808584 Msa0828850:intron 30.0%
AAATATGCCAAATGCATTAC+GGG - chr5_4:1808899-1808918 Msa0828850:intron 30.0%
! ATTTTATCCCGTAATGCATT+TGG + chr5_4:1808909-1808928 None:intergenic 30.0%
ACGGGATAAAATTAAAGATG+TGG - chr5_4:1808917-1808936 Msa0828850:intron 30.0%
TTCAGTAATTTGATTGGAAC+TGG + chr5_4:1809014-1809033 None:intergenic 30.0%
ATTACTGAATCCTAAGTTTG+AGG - chr5_4:1809025-1809044 Msa0828850:intron 30.0%
!! ACTTACTTTTCCTCAAACTT+AGG + chr5_4:1809038-1809057 None:intergenic 30.0%
CCAAATTGAAACATGGAAAA+CGG + chr5_4:1809065-1809084 None:intergenic 30.0%
TTAGCCAATCAGATCATAAA+GGG - chr5_4:1809097-1809116 Msa0828850:intron 30.0%
TTGATGTGAAGGAAAAAGAA+AGG - chr5_4:1809291-1809310 Msa0828850:CDS 30.0%
GGAAAAAGAAAGGTCTTTAA+TGG - chr5_4:1809301-1809320 Msa0828850:CDS 30.0%
! CAAGAACATGCTTTTAAATC+TGG - chr5_4:1809374-1809393 Msa0828850:CDS 30.0%
GAATTAATGTTAAAACTCGC+GGG - chr5_4:1809439-1809458 Msa0828850:CDS 30.0%
AATTAATGTTAAAACTCGCG+GGG - chr5_4:1809440-1809459 Msa0828850:CDS 30.0%
! TCGTTTTCTGAATAGAACAT+AGG - chr5_4:1809501-1809520 Msa0828850:CDS 30.0%
GAACATTTCAGTTTAGTTGT+CGG - chr5_4:1809619-1809638 Msa0828850:intron 30.0%
!! ATGTCTGTTTCTAAATAGCA+TGG - chr5_4:1809678-1809697 Msa0828850:five_prime_UTR 30.0%
GGTAGAGAAGAAAAAAAGAG+GGG + chr5_4:1799670-1799689 None:intergenic 35.0%
GAGGTAGAGAAGAAAAAAAG+AGG + chr5_4:1799672-1799691 None:intergenic 35.0%
AATGAGAAAACAATTGCACG+AGG + chr5_4:1799691-1799710 None:intergenic 35.0%
ACGTAGGAAATTCGAAGTAA+TGG - chr5_4:1799979-1799998 Msa0828850:CDS 35.0%
CGTAGGAAATTCGAAGTAAT+GGG - chr5_4:1799980-1799999 Msa0828850:CDS 35.0%
AAAGGAGATACCAAACGAAT+GGG - chr5_4:1800013-1800032 Msa0828850:CDS 35.0%
GAGTTTATTGATAGGCGAAT+CGG - chr5_4:1800112-1800131 Msa0828850:CDS 35.0%
AACGTCAGGTAGTAATAGTA+TGG - chr5_4:1800191-1800210 Msa0828850:CDS 35.0%
ACCAAGCTATTTATCCAAAC+AGG - chr5_4:1801073-1801092 Msa0828850:intron 35.0%
CCAAGCTATTTATCCAAACA+GGG - chr5_4:1801074-1801093 Msa0828850:intron 35.0%
!!! AACTTTATTTTGGCCCTGTT+TGG + chr5_4:1801090-1801109 None:intergenic 35.0%
AGACTGTTTAGGAGAACATA+TGG + chr5_4:1801214-1801233 None:intergenic 35.0%
GTCGCAAGATAAATTCTCAT+TGG + chr5_4:1801388-1801407 None:intergenic 35.0%
GAATTTATCTTGCGACACAA+AGG - chr5_4:1801392-1801411 Msa0828850:intron 35.0%
TATGGTTGTTGACATTGTAG+TGG - chr5_4:1801614-1801633 Msa0828850:intron 35.0%
! GAAGATGATGATGAGTTTGA+AGG - chr5_4:1801679-1801698 Msa0828850:intron 35.0%
GATGAGTTTGAAGGAATTGA+TGG - chr5_4:1801688-1801707 Msa0828850:intron 35.0%
! TTTGAAGGAATTGATGGTCT+TGG - chr5_4:1801694-1801713 Msa0828850:intron 35.0%
TTTGAAGATGAGATGCTTGA+TGG - chr5_4:1801727-1801746 Msa0828850:intron 35.0%
TTAATGGTGTCTTTGCTGAT+TGG - chr5_4:1801814-1801833 Msa0828850:intron 35.0%
!! AACTTTTGGGGATTGAATTC+TGG - chr5_4:1801924-1801943 Msa0828850:intron 35.0%
CAGATAATTCAGATTTGGGT+CGG - chr5_4:1802152-1802171 Msa0828850:intron 35.0%
GCCTGTTATGCTTTCAATTA+TGG - chr5_4:1802243-1802262 Msa0828850:intron 35.0%
! GCCATAATTGAAAGCATAAC+AGG + chr5_4:1802247-1802266 None:intergenic 35.0%
TCTTCTATTACTGCGACTAT+AGG - chr5_4:1802289-1802308 Msa0828850:intron 35.0%
CTTCTATTACTGCGACTATA+GGG - chr5_4:1802290-1802309 Msa0828850:intron 35.0%
! GATTACACAAAGCATTCATG+GGG + chr5_4:1802328-1802347 None:intergenic 35.0%
! CAGATTACACAAAGCATTCA+TGG + chr5_4:1802330-1802349 None:intergenic 35.0%
GTCACTCAAACAGAAATAAC+TGG + chr5_4:1802353-1802372 None:intergenic 35.0%
!!! TCTTGGTTTTATGTCTCTGT+AGG + chr5_4:1802475-1802494 None:intergenic 35.0%
ACAGAGACATAAAACCAAGA+AGG - chr5_4:1802475-1802494 Msa0828850:intron 35.0%
TAAAACCAAGAAGGAAGTGA+TGG - chr5_4:1802484-1802503 Msa0828850:intron 35.0%
!!! TTTCTTTTGCTTTTTCAGCC+TGG + chr5_4:1802629-1802648 None:intergenic 35.0%
GGCTGAAAAAGCAAAAGAAA+AGG - chr5_4:1802629-1802648 Msa0828850:intron 35.0%
GAATCCTCGAGGATAAATAA+TGG + chr5_4:1802849-1802868 None:intergenic 35.0%
!! ACAAGTTGGTCATATTCATC+AGG + chr5_4:1802941-1802960 None:intergenic 35.0%
CATTAACTGATCTCCAATCT+TGG - chr5_4:1803143-1803162 Msa0828850:intron 35.0%
AACCATCTTAAAACGAAGCT+GGG + chr5_4:1803177-1803196 None:intergenic 35.0%
AAACCATCTTAAAACGAAGC+TGG + chr5_4:1803178-1803197 None:intergenic 35.0%
! GATCTTGGTTTCTCTTTTGA+TGG + chr5_4:1803481-1803500 None:intergenic 35.0%
AGTCATAGTTTCTTCATCGA+CGG + chr5_4:1803536-1803555 None:intergenic 35.0%
TCTTCTAGTGAAGATGATGA+TGG - chr5_4:1803607-1803626 Msa0828850:CDS 35.0%
! TGGTGAAGATGATGATGATT+TGG - chr5_4:1803627-1803646 Msa0828850:CDS 35.0%
! GAAAGTGTAAAGGGAGATAA+TGG - chr5_4:1803898-1803917 Msa0828850:intron 35.0%
AATGCCAAGAAGATAGTCAT+TGG - chr5_4:1803928-1803947 Msa0828850:CDS 35.0%
TCTTAATCGTCAATCGGATT+CGG - chr5_4:1804055-1804074 Msa0828850:CDS 35.0%
AAACATGAATACAAGCACCA+TGG + chr5_4:1804175-1804194 None:intergenic 35.0%
CACTTCTCATGTAAAACAGT+CGG + chr5_4:1804208-1804227 None:intergenic 35.0%
AACAAAGTAATCCGCAAACT+AGG + chr5_4:1804394-1804413 None:intergenic 35.0%
!! TTAGTTTGTCTGAGTCTAAC+AGG + chr5_4:1804495-1804514 None:intergenic 35.0%
CAGACAAACTAAGAGAAATG+AGG - chr5_4:1804503-1804522 Msa0828850:intron 35.0%
AGAGAGACTAAGAGAAATGA+GGG - chr5_4:1804538-1804557 Msa0828850:intron 35.0%
ATTCCATTGACAATACCTAC+TGG - chr5_4:1804755-1804774 Msa0828850:intron 35.0%
ATGTTGTCTGATGTATTGCA+AGG - chr5_4:1805024-1805043 Msa0828850:intron 35.0%
AAAAGAATGCAAACAACCAC+AGG + chr5_4:1805101-1805120 None:intergenic 35.0%
! TGAGTATTGCAAACTGGATT+TGG + chr5_4:1805128-1805147 None:intergenic 35.0%
! ATAACCGTACTTCTCTTTTC+AGG - chr5_4:1805264-1805283 Msa0828850:CDS 35.0%
ACCATTGATAGAGATGAGTA+CGG - chr5_4:1805372-1805391 Msa0828850:CDS 35.0%
CACATATTGCAGCAAAGTAT+GGG + chr5_4:1805402-1805421 None:intergenic 35.0%
! GTTGAGAGTATAAAAAACGG+AGG - chr5_4:1805457-1805476 Msa0828850:CDS 35.0%
GATAAAAGTTAAGGCAGAGA+CGG + chr5_4:1805510-1805529 None:intergenic 35.0%
!! AGAAATTAACTTGCCACACA+AGG + chr5_4:1805796-1805815 None:intergenic 35.0%
ATTCATCGCTCTCAAAACTA+GGG + chr5_4:1806212-1806231 None:intergenic 35.0%
AATTCATCGCTCTCAAAACT+AGG + chr5_4:1806213-1806232 None:intergenic 35.0%
!!! AGTTTTGAGAGCGATGAATT+TGG - chr5_4:1806213-1806232 Msa0828850:intron 35.0%
!! CACATGCACACTTTTTAACT+GGG - chr5_4:1806261-1806280 Msa0828850:intron 35.0%
GTTATCACCATTCACCAATA+AGG - chr5_4:1806445-1806464 Msa0828850:intron 35.0%
ATCAGATCCTTATTGGTGAA+TGG + chr5_4:1806455-1806474 None:intergenic 35.0%
TGCTTTCATCAGATCCTTAT+TGG + chr5_4:1806462-1806481 None:intergenic 35.0%
CAATGAAAAACATAGGCCAA+AGG + chr5_4:1806645-1806664 None:intergenic 35.0%
! TGGCCTATGTTTTTCATTGA+TGG - chr5_4:1806646-1806665 Msa0828850:CDS 35.0%
TTATCTCATCCAACTAAGTG+TGG + chr5_4:1806952-1806971 None:intergenic 35.0%
AGCACTAGTGTTAAGGAATT+TGG + chr5_4:1806997-1807016 None:intergenic 35.0%
AACGATTAGCACTAGTGTTA+AGG + chr5_4:1807004-1807023 None:intergenic 35.0%
GTTTACGGAAGCAAATAATG+AGG - chr5_4:1807184-1807203 Msa0828850:CDS 35.0%
GGAAGCAAATAATGAGGAAA+GGG - chr5_4:1807190-1807209 Msa0828850:CDS 35.0%
AATTCAGCAAGCAAATCAAG+AGG + chr5_4:1807240-1807259 None:intergenic 35.0%
TAAGCATAGATCAGGTAGTA+AGG + chr5_4:1807273-1807292 None:intergenic 35.0%
! CTCTAATGGAAATTTTGCCA+AGG - chr5_4:1807301-1807320 Msa0828850:intron 35.0%
! TTCAGCAATTAGTTTCTCCT+TGG + chr5_4:1807321-1807340 None:intergenic 35.0%
AATTGATGTCCGTGACAAAA+AGG - chr5_4:1807714-1807733 Msa0828850:CDS 35.0%
! TCACTTCATCCTTTTTGTCA+CGG + chr5_4:1807726-1807745 None:intergenic 35.0%
! GTGTGCAGAGTATTAATTAG+AGG - chr5_4:1808125-1808144 Msa0828850:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr5_4:1808226-1808245 Msa0828850:intron 35.0%
CTGGCAGAAAACAAACAATA+TGG + chr5_4:1808324-1808343 None:intergenic 35.0%
CTGCCAGTTATATCATCTTA+TGG - chr5_4:1808337-1808356 Msa0828850:intron 35.0%
AAACTGTCAGTAGTGAAGAA+TGG + chr5_4:1808461-1808480 None:intergenic 35.0%
TGAACAAAGAAAATAGCAGC+GGG - chr5_4:1808566-1808585 Msa0828850:intron 35.0%
!! GGCATTGATATATCCTTGTA+GGG + chr5_4:1808805-1808824 None:intergenic 35.0%
!! AGGCATTGATATATCCTTGT+AGG + chr5_4:1808806-1808825 None:intergenic 35.0%
GAACGAACTCAAGTTATCAT+AGG + chr5_4:1808826-1808845 None:intergenic 35.0%
!! TGAGCTGATTAAGTTGAAAG+TGG - chr5_4:1808941-1808960 Msa0828850:intron 35.0%
TGGATGAACATCATACTTTG+AGG - chr5_4:1808961-1808980 Msa0828850:intron 35.0%
!! TTTTGTTTCCGCATTTGAAG+TGG + chr5_4:1808990-1809009 None:intergenic 35.0%
ATTGAAACATGGAAAACGGA+AGG + chr5_4:1809061-1809080 None:intergenic 35.0%
! CCGTTTTCCATGTTTCAATT+TGG - chr5_4:1809062-1809081 Msa0828850:intron 35.0%
CTTAGCCAATCAGATCATAA+AGG - chr5_4:1809096-1809115 Msa0828850:intron 35.0%
AGTTCCCTTTATGATCTGAT+TGG + chr5_4:1809104-1809123 None:intergenic 35.0%
TTCTTGATGCAGCTATGTTA+AGG - chr5_4:1809154-1809173 Msa0828850:intron 35.0%
TCTTGATGCAGCTATGTTAA+GGG - chr5_4:1809155-1809174 Msa0828850:intron 35.0%
AAAAATTGAAGAGAGAGGTG+AGG - chr5_4:1809216-1809235 Msa0828850:CDS 35.0%
! GCTTTTAAATCTGGACAACT+AGG - chr5_4:1809383-1809402 Msa0828850:CDS 35.0%
AAATCTGGACAACTAGGAAA+AGG - chr5_4:1809389-1809408 Msa0828850:CDS 35.0%
GATAGTCACTTACAAAGTCA+TGG + chr5_4:1809577-1809596 None:intergenic 35.0%
TAGAAACAGACATTCGTAGT+TGG + chr5_4:1809671-1809690 None:intergenic 35.0%
GTGTCTGCTAAGTAAAATGT+TGG - chr5_4:1809709-1809728 Msa0828850:five_prime_UTR 35.0%
CTCAAAACCAAACCCAACAA+TGG - chr5_4:1799793-1799812 Msa0828850:three_prime_UTR 40.0%
TGGATGATTTCGCCATTGTT+GGG + chr5_4:1799808-1799827 None:intergenic 40.0%
TTGGATGATTTCGCCATTGT+TGG + chr5_4:1799809-1799828 None:intergenic 40.0%
GTTGTTCTTCTTCTTCTTGC+TGG + chr5_4:1799882-1799901 None:intergenic 40.0%
GAAAGGAGATACCAAACGAA+TGG - chr5_4:1800012-1800031 Msa0828850:CDS 40.0%
AAGGAGATACCAAACGAATG+GGG - chr5_4:1800014-1800033 Msa0828850:CDS 40.0%
!! GTTCTCTTGCTATTGAGAAG+AGG - chr5_4:1800044-1800063 Msa0828850:CDS 40.0%
GAGGAAGAAGACACTTCTTA+AGG - chr5_4:1800063-1800082 Msa0828850:CDS 40.0%
GAATCGGTGAGAATGATGAA+GGG - chr5_4:1800128-1800147 Msa0828850:CDS 40.0%
!! GATGAAGGGCTTGATGATTT+TGG - chr5_4:1800142-1800161 Msa0828850:CDS 40.0%
TCAATCTAAACAGGCTCTCT+GGG + chr5_4:1800825-1800844 None:intergenic 40.0%
CCCTGTTTGGATAAATAGCT+TGG + chr5_4:1801077-1801096 None:intergenic 40.0%
TGGGGACCTTGATGAAAATA+AGG - chr5_4:1801153-1801172 Msa0828850:intron 40.0%
! CAAGCTTTGTGAGACTGTTT+AGG + chr5_4:1801225-1801244 None:intergenic 40.0%
! AAGGAATTGATGGTCTTGGA+AGG - chr5_4:1801698-1801717 Msa0828850:intron 40.0%
! AGGAATTGATGGTCTTGGAA+GGG - chr5_4:1801699-1801718 Msa0828850:intron 40.0%
! TGTCTTTGCTGATTGGAACT+TGG - chr5_4:1801821-1801840 Msa0828850:intron 40.0%
AGAAAGCTTGAGAACTCCTT+AGG + chr5_4:1801950-1801969 None:intergenic 40.0%
TGAGTGACTATAGGGAATCT+TGG - chr5_4:1802365-1802384 Msa0828850:intron 40.0%
AGATAAGGACTTCACTTCTC+TGG - chr5_4:1802680-1802699 Msa0828850:intron 40.0%
! AAGATGGCTTGTCTGCTAAA+CGG - chr5_4:1802799-1802818 Msa0828850:intron 40.0%
GGTACCATTATTTATCCTCG+AGG - chr5_4:1802842-1802861 Msa0828850:intron 40.0%
TCCAACTTTCTCTTTATGGC+AGG - chr5_4:1802910-1802929 Msa0828850:intron 40.0%
TCCTGCCATAAAGAGAAAGT+TGG + chr5_4:1802914-1802933 None:intergenic 40.0%
TGACCAACTTGTCAGACAAA+TGG - chr5_4:1802949-1802968 Msa0828850:intron 40.0%
GACCAACTTGTCAGACAAAT+GGG - chr5_4:1802950-1802969 Msa0828850:intron 40.0%
ATCCCATTTGTCTGACAAGT+TGG + chr5_4:1802955-1802974 None:intergenic 40.0%
AAGAGAACATCTAGAGGAGT+TGG - chr5_4:1803036-1803055 Msa0828850:intron 40.0%
CTGGGATATACAACCAAGAT+TGG + chr5_4:1803159-1803178 None:intergenic 40.0%
!!! ATCCCAGCTTCGTTTTAAGA+TGG - chr5_4:1803172-1803191 Msa0828850:intron 40.0%
! TTGGTGATAGTCGTGGAAAT+GGG - chr5_4:1803305-1803324 Msa0828850:intron 40.0%
TGCACATGGGAGTAAAATTG+TGG - chr5_4:1803333-1803352 Msa0828850:intron 40.0%
TTCAGAAAAAACGGCAGAAG+AGG - chr5_4:1803404-1803423 Msa0828850:intron 40.0%
AGGTCTGAAGATTCTGATGA+TGG - chr5_4:1803652-1803671 Msa0828850:CDS 40.0%
!! AGATTCTGATGATGGATCAG+AGG - chr5_4:1803660-1803679 Msa0828850:CDS 40.0%
! GATGATGATGATATCAGTGC+AGG - chr5_4:1803736-1803755 Msa0828850:CDS 40.0%
TACCTTATCAACTTCTTCCG+CGG + chr5_4:1803827-1803846 None:intergenic 40.0%
CCAAGAAGATAGTCATTGGA+GGG - chr5_4:1803932-1803951 Msa0828850:CDS 40.0%
AGGGAAAATGTCGAAAGAGT+TGG - chr5_4:1803951-1803970 Msa0828850:CDS 40.0%
! TTTTCTGCAGCAAGTGTGAT+TGG + chr5_4:1804090-1804109 None:intergenic 40.0%
TTCTCATGTAAAACAGTCGG+TGG + chr5_4:1804205-1804224 None:intergenic 40.0%
CAGAGAGACTAAGAGAAATG+AGG - chr5_4:1804537-1804556 Msa0828850:intron 40.0%
CAGATATGGTACACAGCTAA+CGG - chr5_4:1804820-1804839 Msa0828850:intron 40.0%
AGATATGGTACACAGCTAAC+GGG - chr5_4:1804821-1804840 Msa0828850:intron 40.0%
TCCGTACTCATCTCTATCAA+TGG + chr5_4:1805376-1805395 None:intergenic 40.0%
GCACATATTGCAGCAAAGTA+TGG + chr5_4:1805403-1805422 None:intergenic 40.0%
CTATCACAGAAAGTAGCAGT+TGG - chr5_4:1805583-1805602 Msa0828850:CDS 40.0%
ATCGGAACATGGAAATACCA+TGG + chr5_4:1805646-1805665 None:intergenic 40.0%
! GGATGTCTAAAATCGGAACA+TGG + chr5_4:1805657-1805676 None:intergenic 40.0%
AGTATCACAGGAGTCATAAC+TGG + chr5_4:1805678-1805697 None:intergenic 40.0%
TCGCACATCAATAGTATCAC+AGG + chr5_4:1805690-1805709 None:intergenic 40.0%
TATCACGGCCAGATGTTATT+GGG + chr5_4:1805728-1805747 None:intergenic 40.0%
ATATCACGGCCAGATGTTAT+TGG + chr5_4:1805729-1805748 None:intergenic 40.0%
AAGAACCAACGGCAATATCA+CGG + chr5_4:1805743-1805762 None:intergenic 40.0%
CTCTCAAAACTAGGGTTCAT+AGG + chr5_4:1806204-1806223 None:intergenic 40.0%
! CCAGTTAAAAAGTGTGCATG+TGG + chr5_4:1806263-1806282 None:intergenic 40.0%
!! CCACATGCACACTTTTTAAC+TGG - chr5_4:1806260-1806279 Msa0828850:intron 40.0%
CTAACTTAAAGGACTGCAGA+TGG - chr5_4:1806379-1806398 Msa0828850:CDS 40.0%
AAAGGACTGCAGATGGTATT+TGG - chr5_4:1806386-1806405 Msa0828850:CDS 40.0%
!!! GGTAGGATGCCACTTTTTAA+TGG + chr5_4:1806498-1806517 None:intergenic 40.0%
GATGTTCGCTATATAGCCTT+TGG - chr5_4:1806626-1806645 Msa0828850:CDS 40.0%
ATCGTTGTTGTCGAACAAAC+TGG - chr5_4:1807018-1807037 Msa0828850:intron 40.0%
CGGAAGCAAATAATGAGGAA+AGG - chr5_4:1807189-1807208 Msa0828850:CDS 40.0%
! GAAAGGGCATGATCTTATGT+GGG - chr5_4:1807206-1807225 Msa0828850:CDS 40.0%
ACGTAGGTTAAGCATAGATC+AGG + chr5_4:1807281-1807300 None:intergenic 40.0%
TGCTTAACCTACGTCTCTAA+TGG - chr5_4:1807287-1807306 Msa0828850:intron 40.0%
TATCATGCAGGAACTAGCTA+AGG + chr5_4:1807958-1807977 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr5_4:1808230-1808249 None:intergenic 40.0%
ATGATGGCACCAGAATGTTA+TGG - chr5_4:1808283-1808302 Msa0828850:intron 40.0%
TCCTCATTAATGCGCAATAG+TGG + chr5_4:1808380-1808399 None:intergenic 40.0%
AGTGAAGAATGGAGAGTCTT+CGG + chr5_4:1808450-1808469 None:intergenic 40.0%
TCTTCACTACTGACAGTTTC+AGG - chr5_4:1808462-1808481 Msa0828850:intron 40.0%
GAACAAAGAAAATAGCAGCG+GGG - chr5_4:1808567-1808586 Msa0828850:intron 40.0%
TATGGATGCAGCTAATGTTG+AGG - chr5_4:1808666-1808685 Msa0828850:intron 40.0%
! TTTTTCTTTCAGCTCGCTCA+CGG + chr5_4:1809199-1809218 None:intergenic 40.0%
CTACTTCTTGCTTGATGTGA+AGG - chr5_4:1809280-1809299 Msa0828850:CDS 40.0%
AAAGCAAGAGCTGAGAAGTA+TGG - chr5_4:1809326-1809345 Msa0828850:CDS 40.0%
ATGTTCTTGCTCTTGAAGGA+AGG + chr5_4:1809363-1809382 None:intergenic 40.0%
AAGCATGTTCTTGCTCTTGA+AGG + chr5_4:1809367-1809386 None:intergenic 40.0%
GAAATGTTCAGATTCTCTCG+AGG + chr5_4:1809608-1809627 None:intergenic 40.0%
!! CAAAGGTGCTGGACAAGAAA+CGG + chr5_4:1799770-1799789 None:intergenic 45.0%
!!! GGTTTGGTTTTGAGCAGCAA+AGG + chr5_4:1799787-1799806 None:intergenic 45.0%
GATTTCGCCATTGTTGGGTT+TGG + chr5_4:1799803-1799822 None:intergenic 45.0%
GTTGTTGCTGCTAGTTCCAT+TGG + chr5_4:1799843-1799862 None:intergenic 45.0%
!! GTGACCAGATTGACTCGAAT+GGG + chr5_4:1799961-1799980 None:intergenic 45.0%
!! TCGAAGTAATGGGTCAGAAG+CGG - chr5_4:1799990-1800009 Msa0828850:CDS 45.0%
AGATACCAAACGAATGGGGT+TGG - chr5_4:1800018-1800037 Msa0828850:CDS 45.0%
CGAATCGGTGAGAATGATGA+AGG - chr5_4:1800127-1800146 Msa0828850:CDS 45.0%
GTCAATCTAAACAGGCTCTC+TGG + chr5_4:1800826-1800845 None:intergenic 45.0%
TGAATCCAAACGGGTCCTAA+TGG - chr5_4:1801269-1801288 Msa0828850:intron 45.0%
GAATCCAAACGGGTCCTAAT+GGG - chr5_4:1801270-1801289 Msa0828850:intron 45.0%
!! GCTTTGAAGCTGTTTCTGAC+CGG - chr5_4:1802441-1802460 Msa0828850:intron 45.0%
GTCTCTGTAGGATAAGTCAC+CGG + chr5_4:1802463-1802482 None:intergenic 45.0%
TTCGTCCATCACTTCCTTCT+TGG + chr5_4:1802492-1802511 None:intergenic 45.0%
GGAAAAAGATGAAGACCTGC+TGG - chr5_4:1802650-1802669 Msa0828850:intron 45.0%
AAAGATGAAGACCTGCTGGA+AGG - chr5_4:1802654-1802673 Msa0828850:intron 45.0%
CCTTATCTAATCCTTCCAGC+AGG + chr5_4:1802668-1802687 None:intergenic 45.0%
CCTGCTGGAAGGATTAGATA+AGG - chr5_4:1802665-1802684 Msa0828850:intron 45.0%
!! GATGAAAGCTTTGAAGGCTC+TGG - chr5_4:1802743-1802762 Msa0828850:intron 45.0%
GACTCAGGAAGAGATTGATC+AGG - chr5_4:1803009-1803028 Msa0828850:intron 45.0%
TCAGGAAGAGATTGATCAGG+AGG - chr5_4:1803012-1803031 Msa0828850:intron 45.0%
GGAGGAAAGAGAACATCTAG+AGG - chr5_4:1803030-1803049 Msa0828850:intron 45.0%
AGAACATCTAGAGGAGTTGG+AGG - chr5_4:1803039-1803058 Msa0828850:intron 45.0%
GCCAACAACCTTACAAGTGA+CGG + chr5_4:1803268-1803287 None:intergenic 45.0%
GACTATCACCAAGAACCACA+GGG + chr5_4:1803297-1803316 None:intergenic 45.0%
! CTTGGTGATAGTCGTGGAAA+TGG - chr5_4:1803304-1803323 Msa0828850:intron 45.0%
TTCACTCGAATCTTCAGCAG+CGG + chr5_4:1803434-1803453 None:intergenic 45.0%
GAGAAACCAAGATCTCTCTC+TGG - chr5_4:1803487-1803506 Msa0828850:intron 45.0%
TCATCACCAGAGAGAGATCT+TGG + chr5_4:1803496-1803515 None:intergenic 45.0%
AGTTTCTTCATCGACGGAGA+AGG + chr5_4:1803530-1803549 None:intergenic 45.0%
TCTCGAGAGAAGAGATGAAG+AGG - chr5_4:1803579-1803598 Msa0828850:intron 45.0%
GAGAGAAGAGATGAAGAGGA+GGG - chr5_4:1803583-1803602 Msa0828850:intron 45.0%
GAAGACGATGATATCAGTGC+TGG - chr5_4:1803769-1803788 Msa0828850:CDS 45.0%
TGGTTCAGAAGACGAAGATG+AGG - chr5_4:1803789-1803808 Msa0828850:intron 45.0%
GCCAAGAAGATAGTCATTGG+AGG - chr5_4:1803931-1803950 Msa0828850:CDS 45.0%
CCCTCCAATGACTATCTTCT+TGG + chr5_4:1803935-1803954 None:intergenic 45.0%
! ACATGAGAAGTGCGATCTCT+TGG - chr5_4:1804216-1804235 Msa0828850:intron 45.0%
GTCTGAGTCTAACAGGTATG+AGG + chr5_4:1804488-1804507 None:intergenic 45.0%
! AGGCCAGTAGGTATTGTCAA+TGG + chr5_4:1804761-1804780 None:intergenic 45.0%
! TACAAGTCTTGTAGGCCAGT+AGG + chr5_4:1804773-1804792 None:intergenic 45.0%
GATATGGTACACAGCTAACG+GGG - chr5_4:1804822-1804841 Msa0828850:intron 45.0%
! AGACACAGCGTCTTTGAAGA+AGG + chr5_4:1805609-1805628 None:intergenic 45.0%
TCTATTGCGATTGTGGTCCA+TGG - chr5_4:1805626-1805645 Msa0828850:CDS 45.0%
ATGCGTTGCCCAATAACATC+TGG - chr5_4:1805717-1805736 Msa0828850:CDS 45.0%
CTCTCTGTAAGTACCTTGTG+TGG - chr5_4:1805780-1805799 Msa0828850:CDS 45.0%
CTTAGAAAGCAGAGGACCAA+AGG + chr5_4:1806572-1806591 None:intergenic 45.0%
TAGCGTCTTCCACACTTAGT+TGG - chr5_4:1806940-1806959 Msa0828850:intron 45.0%
!! TCGAACAAACTGGTGTTGCT+TGG - chr5_4:1807028-1807047 Msa0828850:intron 45.0%
! GGAAAGGGCATGATCTTATG+TGG - chr5_4:1807205-1807224 Msa0828850:CDS 45.0%
! GGAGGGAGTATATATCATGC+AGG + chr5_4:1807970-1807989 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr5_4:1808229-1808248 None:intergenic 45.0%
!! TATGGTGCTGTACCTCATGA+TGG - chr5_4:1808267-1808286 Msa0828850:intron 45.0%
!! AACATTCTGGTGCCATCATG+AGG + chr5_4:1808282-1808301 None:intergenic 45.0%
TGGCACCAGAATGTTATGGT+TGG - chr5_4:1808287-1808306 Msa0828850:intron 45.0%
GCCACTATTGCGCATTAATG+AGG - chr5_4:1808376-1808395 Msa0828850:intron 45.0%
GTGAAGAATGGAGAGTCTTC+GGG + chr5_4:1808449-1808468 None:intergenic 45.0%
TCCTTGTAGGGTTTCAACAG+CGG + chr5_4:1808793-1808812 None:intergenic 45.0%
! CAAGAGCTGAGAAGTATGGA+AGG - chr5_4:1809330-1809349 Msa0828850:CDS 45.0%
!! AAATATTTATATGTAAAATT+TGG + chr5_4:1806117-1806136 None:intergenic 5.0%
GCGGGTGAAGAAGAAGAAGA+AGG + chr5_4:1799745-1799764 None:intergenic 50.0%
!! GTTTTGAGCAGCAAAGGTGC+TGG + chr5_4:1799781-1799800 None:intergenic 50.0%
CAACAAAATGGGTCCCGAAG+CGG - chr5_4:1799898-1799917 Msa0828850:three_prime_UTR 50.0%
TGCTTTCATGGCTACCGCTT+CGG + chr5_4:1799915-1799934 None:intergenic 50.0%
!! CCAGATTGACTCGAATGGGT+TGG + chr5_4:1799957-1799976 None:intergenic 50.0%
CCAACCCATTCGAGTCAATC+TGG - chr5_4:1799954-1799973 Msa0828850:exon 50.0%
!! CGTGACCAGATTGACTCGAA+TGG + chr5_4:1799962-1799981 None:intergenic 50.0%
TCGAGTCAATCTGGTCACGT+AGG - chr5_4:1799963-1799982 Msa0828850:CDS 50.0%
!! GTAATGGGTCAGAAGCGGAA+AGG - chr5_4:1799995-1800014 Msa0828850:CDS 50.0%
! ACAGGCTCTCTGGGTTTGTT+TGG + chr5_4:1800816-1800835 None:intergenic 50.0%
CAAACCCATTAGGACCCGTT+TGG + chr5_4:1801277-1801296 None:intergenic 50.0%
GGGGATTGAATTCTGGCCTA+AGG - chr5_4:1801931-1801950 Msa0828850:intron 50.0%
! CACTTCTCTGGCTCATTCTG+AGG - chr5_4:1802692-1802711 Msa0828850:intron 50.0%
TGGTTCAGTCAGAGCCAACA+AGG + chr5_4:1802718-1802737 None:intergenic 50.0%
GAGTCTTCCGCCTATCTGAA+GGG + chr5_4:1802994-1803013 None:intergenic 50.0%
TGAGTCTTCCGCCTATCTGA+AGG + chr5_4:1802995-1803014 None:intergenic 50.0%
TTCAGATAGGCGGAAGACTC+AGG - chr5_4:1802994-1803013 Msa0828850:intron 50.0%
TGTTGACAACGAGTGAGCCT+TGG - chr5_4:1803237-1803256 Msa0828850:intron 50.0%
TACAAGTGACGGCATTGCCA+AGG + chr5_4:1803257-1803276 None:intergenic 50.0%
TGGCAATGCCGTCACTTGTA+AGG - chr5_4:1803257-1803276 Msa0828850:intron 50.0%
GCCGTCACTTGTAAGGTTGT+TGG - chr5_4:1803264-1803283 Msa0828850:intron 50.0%
!! GTTGTTGGCTTGTAACCCTG+TGG - chr5_4:1803279-1803298 Msa0828850:intron 50.0%
GCTTGTAACCCTGTGGTTCT+TGG - chr5_4:1803286-1803305 Msa0828850:intron 50.0%
CGACTATCACCAAGAACCAC+AGG + chr5_4:1803298-1803317 None:intergenic 50.0%
! GTGGTTCTTGGTGATAGTCG+TGG - chr5_4:1803298-1803317 Msa0828850:intron 50.0%
! GAAATGGGCTCTCTGCACAT+GGG - chr5_4:1803320-1803339 Msa0828850:intron 50.0%
! TCTCTCTCTGGTGATGACCT+TGG - chr5_4:1803499-1803518 Msa0828850:intron 50.0%
CGAGAGAAGAGATGAAGAGG+AGG - chr5_4:1803582-1803601 Msa0828850:intron 50.0%
TGAGGATGAAGAAAGAGCCG+CGG - chr5_4:1803807-1803826 Msa0828850:intron 50.0%
!! AGCCGCGGAAGAAGTTGATA+AGG - chr5_4:1803822-1803841 Msa0828850:intron 50.0%
! ATGTAGAAAGCACGTGCCTG+TGG - chr5_4:1805082-1805101 Msa0828850:intron 50.0%
CGCTGTGTCTATTGCGATTG+TGG - chr5_4:1805619-1805638 Msa0828850:CDS 50.0%
TGTAGGCCAAATATCTCCCG+CGG - chr5_4:1805838-1805857 Msa0828850:CDS 50.0%
AAAGGACCGCGGGAGATATT+TGG + chr5_4:1805847-1805866 None:intergenic 50.0%
ACGTCGAACTTAAAGGACCG+CGG + chr5_4:1805858-1805877 None:intergenic 50.0%
AGACGCTAGCACACAAGATG+AGG + chr5_4:1806928-1806947 None:intergenic 50.0%
TTGCTGAAAAAGGGGAGCAG+AGG - chr5_4:1807333-1807352 Msa0828850:intron 50.0%
ACCGCTGTTGAAACCCTACA+AGG - chr5_4:1808789-1808808 Msa0828850:intron 50.0%
TGAGGCGACCACTTCAAATG+CGG - chr5_4:1808979-1808998 Msa0828850:intron 50.0%
!! AGGTGCTGGACAAGAAACGG+CGG + chr5_4:1799767-1799786 None:intergenic 55.0%
TCCAAACGCAGCATCGCCAA+TGG - chr5_4:1799824-1799843 Msa0828850:three_prime_UTR 55.0%
TCCATTGGCGATGCTGCGTT+TGG + chr5_4:1799828-1799847 None:intergenic 55.0%
GCTTTCATGGCTACCGCTTC+GGG + chr5_4:1799914-1799933 None:intergenic 55.0%
ACGAGCCAACCCCATTCGTT+TGG + chr5_4:1800026-1800045 None:intergenic 55.0%
GCTCGTAGTATGCAGAGTCC+AGG - chr5_4:1802184-1802203 Msa0828850:intron 55.0%
! CCCTACATTTTCCCCACCGT+CGG + chr5_4:1802224-1802243 None:intergenic 55.0%
CCGACGGTGGGGAAAATGTA+GGG - chr5_4:1802221-1802240 Msa0828850:intron 55.0%
!! GGCTCATTCTGAGGCCTTGT+TGG - chr5_4:1802701-1802720 Msa0828850:intron 55.0%
CAGGGCAAGAAGAATCCTCG+AGG + chr5_4:1802860-1802879 None:intergenic 55.0%
! GGAAATGGGCTCTCTGCACA+TGG - chr5_4:1803319-1803338 Msa0828850:intron 55.0%
! TTTCTAGGAGACTGCTCCCC+TGG - chr5_4:1804866-1804885 Msa0828850:intron 55.0%
TCTGGCCGTGATATTGCCGT+TGG - chr5_4:1805735-1805754 Msa0828850:CDS 55.0%
CGTCGAACTTAAAGGACCGC+GGG + chr5_4:1805857-1805876 None:intergenic 55.0%
CGCTAGCACACAAGATGAGG+AGG + chr5_4:1806925-1806944 None:intergenic 55.0%
TGAAAAAGGGGAGCAGAGGC+AGG - chr5_4:1807337-1807356 Msa0828850:intron 55.0%
AGGTGAGGCGCGAAGCTAAA+GGG - chr5_4:1809231-1809250 Msa0828850:CDS 55.0%
TGCTGGACAAGAAACGGCGG+CGG + chr5_4:1799764-1799783 None:intergenic 60.0%
GAGATCGCAGCGTGAACGTC+AGG - chr5_4:1800177-1800196 Msa0828850:CDS 60.0%
ATGCAGAGTCCAGGCGAAGC+TGG - chr5_4:1802193-1802212 Msa0828850:intron 60.0%
GCCGACGGTGGGGAAAATGT+AGG - chr5_4:1802220-1802239 Msa0828850:intron 60.0%
TGCGTGCTCGCCCTTCAGAT+AGG - chr5_4:1802981-1803000 Msa0828850:intron 60.0%
GTGCTCGCCCTTCAGATAGG+CGG - chr5_4:1802984-1803003 Msa0828850:intron 60.0%
CGACGGAGAAGGAATCGCCA+AGG + chr5_4:1803519-1803538 None:intergenic 60.0%
GAGCAGAGGCAGGTTGTGCA+AGG - chr5_4:1807347-1807366 Msa0828850:intron 60.0%
CTTTCAGCTCGCTCACGGTC+TGG + chr5_4:1809194-1809213 None:intergenic 60.0%
GAGGTGAGGCGCGAAGCTAA+AGG - chr5_4:1809230-1809249 Msa0828850:CDS 60.0%
GGTGAGGCGCGAAGCTAAAG+GGG - chr5_4:1809232-1809251 Msa0828850:CDS 60.0%
GCTGGACAAGAAACGGCGGC+GGG + chr5_4:1799763-1799782 None:intergenic 65.0%
AAGCTGGCGTAGCCGACGGT+GGG - chr5_4:1802209-1802228 Msa0828850:intron 65.0%
TCGGCTACGCCAGCTTCGCC+TGG + chr5_4:1802205-1802224 None:intergenic 70.0%
GGCGAAGCTGGCGTAGCCGA+CGG - chr5_4:1802205-1802224 Msa0828850:intron 70.0%
GAAGCTGGCGTAGCCGACGG+TGG - chr5_4:1802208-1802227 Msa0828850:intron 70.0%
AGCTGGCGTAGCCGACGGTG+GGG - chr5_4:1802210-1802229 Msa0828850:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 1799648 1809741 1799648 ID=Msa0828850;Name=Msa0828850
chr5_4 mRNA 1799648 1809741 1799648 ID=Msa0828850-mRNA-1;Parent=Msa0828850;Name=Msa0828850-mRNA-1;_AED=0.07;_eAED=0.07;_QI=134|0.91|1|1|0.91|0.84|13|311|931
chr5_4 exon 1799648 1800223 1799648 ID=Msa0828850-mRNA-1:exon:498;Parent=Msa0828850-mRNA-1
chr5_4 exon 1800338 1800616 1800338 ID=Msa0828850-mRNA-1:exon:497;Parent=Msa0828850-mRNA-1
chr5_4 exon 1800906 1801045 1800906 ID=Msa0828850-mRNA-1:exon:496;Parent=Msa0828850-mRNA-1
chr5_4 exon 1803604 1803797 1803604 ID=Msa0828850-mRNA-1:exon:495;Parent=Msa0828850-mRNA-1
chr5_4 exon 1803911 1804103 1803911 ID=Msa0828850-mRNA-1:exon:494;Parent=Msa0828850-mRNA-1
chr5_4 exon 1805264 1805980 1805264 ID=Msa0828850-mRNA-1:exon:493;Parent=Msa0828850-mRNA-1
chr5_4 exon 1806329 1806457 1806329 ID=Msa0828850-mRNA-1:exon:492;Parent=Msa0828850-mRNA-1
chr5_4 exon 1806547 1806759 1806547 ID=Msa0828850-mRNA-1:exon:491;Parent=Msa0828850-mRNA-1
chr5_4 exon 1806851 1806910 1806851 ID=Msa0828850-mRNA-1:exon:490;Parent=Msa0828850-mRNA-1
chr5_4 exon 1807152 1807234 1807152 ID=Msa0828850-mRNA-1:exon:489;Parent=Msa0828850-mRNA-1
chr5_4 exon 1807620 1807755 1807620 ID=Msa0828850-mRNA-1:exon:488;Parent=Msa0828850-mRNA-1
chr5_4 exon 1809191 1809612 1809191 ID=Msa0828850-mRNA-1:exon:487;Parent=Msa0828850-mRNA-1
chr5_4 exon 1809643 1809741 1809643 ID=Msa0828850-mRNA-1:exon:486;Parent=Msa0828850-mRNA-1
chr5_4 five_prime_UTR 1809643 1809741 1809643 ID=Msa0828850-mRNA-1:five_prime_utr;Parent=Msa0828850-mRNA-1
chr5_4 five_prime_UTR 1809578 1809612 1809578 ID=Msa0828850-mRNA-1:five_prime_utr;Parent=Msa0828850-mRNA-1
chr5_4 CDS 1809191 1809577 1809191 ID=Msa0828850-mRNA-1:cds;Parent=Msa0828850-mRNA-1
chr5_4 CDS 1807620 1807755 1807620 ID=Msa0828850-mRNA-1:cds;Parent=Msa0828850-mRNA-1
chr5_4 CDS 1807152 1807234 1807152 ID=Msa0828850-mRNA-1:cds;Parent=Msa0828850-mRNA-1
chr5_4 CDS 1806851 1806910 1806851 ID=Msa0828850-mRNA-1:cds;Parent=Msa0828850-mRNA-1
chr5_4 CDS 1806547 1806759 1806547 ID=Msa0828850-mRNA-1:cds;Parent=Msa0828850-mRNA-1
chr5_4 CDS 1806329 1806457 1806329 ID=Msa0828850-mRNA-1:cds;Parent=Msa0828850-mRNA-1
chr5_4 CDS 1805264 1805980 1805264 ID=Msa0828850-mRNA-1:cds;Parent=Msa0828850-mRNA-1
chr5_4 CDS 1803911 1804103 1803911 ID=Msa0828850-mRNA-1:cds;Parent=Msa0828850-mRNA-1
chr5_4 CDS 1803604 1803797 1803604 ID=Msa0828850-mRNA-1:cds;Parent=Msa0828850-mRNA-1
chr5_4 CDS 1800906 1801045 1800906 ID=Msa0828850-mRNA-1:cds;Parent=Msa0828850-mRNA-1
chr5_4 CDS 1800338 1800616 1800338 ID=Msa0828850-mRNA-1:cds;Parent=Msa0828850-mRNA-1
chr5_4 CDS 1799959 1800223 1799959 ID=Msa0828850-mRNA-1:cds;Parent=Msa0828850-mRNA-1
chr5_4 three_prime_UTR 1799648 1799958 1799648 ID=Msa0828850-mRNA-1:three_prime_utr;Parent=Msa0828850-mRNA-1
Gene Sequence

>Msa0828850

ATGGCGAAATCATCCAAACGCAGCATCGCCAATGGAACTAGCAGCAACAACAACAACAACAAGAGCACCAGCAAGAAGAAGAAGAACAACAAAATGGGTCCCGAAGCGGTAGCCATGAAAGCAAAAGCTCAAAAAACGAACACCAACCCATTCGAGTCAATCTGGTCACGTAGGAAATTCGAAGTAATGGGTCAGAAGCGGAAAGGAGATACCAAACGAATGGGGTTGGCTCGTTCTCTTGCTATTGAGAAGAGGAAGAAGACACTTCTTAAGGAGTATGAACAGAGTAACAAATCTTCGGAGTTTATTGATAGGCGAATCGGTGAGAATGATGAAGGGCTTGATGATTTTGGTAAAGCTATTTTGAGATCGCAGCGTGAACGTCAGTGGAATGTGAAATCGAGTAAGAAAAGCAAGTATCACTTGTCAGAAGAAGATGATGATGAGTTTGAAGGAATTGATGGTCTTGGAAGGGATGACTTTGAAGATGAGATGCTTGATGGAGATGATGATGAAACTGATAATAATTCAGATTTGGGTCGGCGTCGTAATGCTCGTAGTATGCAGAGTCCAGGCGAAGCTGGCGTAGCCGACGGTGGGGAAAATAGACATAAAACCAAGAAGGAAGTGATGGACGAAGTTATTGCAAAAAGCAAGTTTTACAAGGCTGAAAAAGCAAAAGAAAAGGAAAAAGATGAAGACCTGCTGGAAGGATTAGATAAGGACTTCACTTCTCTGGCTCATTCTGAGGCCTTGTTGGCTCTGACTGAACCAAACAAGATGAAAGCTTTGAAGGCTCTGGTGAACAGTAGTATTTCAAATGAAAAAAGTGATAAAGATGGCTTGTCTGCTAAACGGACAATGAATAATTCTGTTCAGGAAAAGCCTGATGAATATGACCAACTTGTCAGACAAATGGGATTTGAAATGCGTGCTCGCCCTTCAGATAGGCGGAAGACTCAGGAAGAGATTGATCAGGAGGAAAGAGAACATCTAGAGGAGTTGGAGAAAAAACGGCAGAAGAGGATGACCGCTGCTGAAGATTCGAGTGAAGAAGACGATGAAGAATCAGAAAAGCCATCAAAAGAGAAACCAAGATCTCTCTCTGGTGATGACCTTGGCGATTCCTTCTCCGTCGATGAAGAAACTATGACTAAAAAGGGTTGGGTTGATGAAATTCTCGAGAGAAGAGATGAAGAGGAGGGTTCTTCTAGTGAAGATGATGATGGTGAAGATGATGATGATTTGGAAAGGTCTGAAGATTCTGATGATGGATCAGAGGATGATCTTGATGAAAACGATAAGAATACTACTTTGAAAGATTGGGAACAGAGTGATGATGATGATATCAGTGCAGGTTCAGAAGATGAAGACGATGATATCAGTGCTGGTTCAGAAGACGAAGATGAGGATGAAGAAAGAGCCGCGGAAGAAGTTGATAAGGTAAAAAGATTGAATGTTGGTATTCATAAAAAAGCAAAGAGAATTGATTCTGTTGAAAGTGTAAAGGGAGATAATGGTTCTTTAAATGCCAAGAAGATAGTCATTGGAGGGAAAATGTCGAAAGAGTTGGAGATTCCTTATATAATTGAAGCTCCGAAGACCTTTGAAGAATTATGTTCACTAGTGGATAAACGTTCAAATTCTGACACTATCTTAATCGTCAATCGGATTCGGAAAAGCAATCCAATCACACTTGCTGCAGAAAATCGAAAGAAAGTACAAGTATTTTATGGAGTATTATTGCAGTATTTTGCTGTTTTGGCAAATAAGAAACCATTGAACGTTGAATTGATTAACATGCTAGTGAAACCATTGATAGAGATGAGTACGGAAATCCCATACTTTGCTGCAATATGTGCTCGTCGCAGAATAGAAATCACTAGAAAGCAATTTGTTGAGAGTATAAAAAACGGAGAAAGTAGCAGTTGGCCTTCTTCAAAGACGCTGTGTCTATTGCGATTGTGGTCCATGGTATTTCCATGTTCCGATTTTAGACATCCAGTTATGACTCCTGTGATACTATTGATGTGCGAATATCTGATGCGTTGCCCAATAACATCTGGCCGTGATATTGCCGTTGGTTCTTTCTTATGTTCTATGCTTCTCTCTTTATATCATCTTATGGAACTGAAAGATCTCAAGCCACTATTGCGCATTAATGAGGAAGTAGACAAGATTAGCGCTTTGAATTTCTTTAAGTTAATAGACATGCCCGAAGACTCTCCATTCTTCACTACTGACAGTTTCAGGGCTAGTGTATTAGTTACCGCTGTTGAAACCCTACAAGGATATATCAATGCCTATGATAACTTGAGTTCGTTCCCAGAAATATTTTTACCAATTTTGAGATTACTACTTGAGATAGCTGAACAGAAAAATATGCCAAATGCATTACGGGATAAAATTAAAGATGTGGCTGAGCTGATTAAGTTGAAAGTGGATGAACATCATACTTTGAGGCGACCACTTCAAATGCGGAAACAAAAGCCAGTTCCAATCAAATTACTGAATCCTAAGTTTGAGGAAAACTATGTTAAGGGTAGAGATTATGATCCAGACCGTGAGCGAGCTGAAAGAAAAAAATTGAAGAGAGAGGTGAGGCGCGAAGCTAAAGGGGCTGCTCGTGAAATACGTAAAGACAACTACTTCTTGCTTGATGTGAAGGAAAAAGAAAGGTCTTTAATGGAGAAAGCAAGAGCTGAGAAGTATGGAAGGACTAAAGCCTTCCTTCAAGAGCAAGAACATGCTTTTAAATCTGGACAACTAGGAAAAGGAAAGAAGAGAAGTAGATAA

Protein sequence

>Msa0828850

MAKSSKRSIANGTSSNNNNNKSTSKKKKNNKMGPEAVAMKAKAQKTNTNPFESIWSRRKFEVMGQKRKGDTKRMGLARSLAIEKRKKTLLKEYEQSNKSSEFIDRRIGENDEGLDDFGKAILRSQRERQWNVKSSKKSKYHLSEEDDDEFEGIDGLGRDDFEDEMLDGDDDETDNNSDLGRRRNARSMQSPGEAGVADGGENRHKTKKEVMDEVIAKSKFYKAEKAKEKEKDEDLLEGLDKDFTSLAHSEALLALTEPNKMKALKALVNSSISNEKSDKDGLSAKRTMNNSVQEKPDEYDQLVRQMGFEMRARPSDRRKTQEEIDQEEREHLEELEKKRQKRMTAAEDSSEEDDEESEKPSKEKPRSLSGDDLGDSFSVDEETMTKKGWVDEILERRDEEEGSSSEDDDGEDDDDLERSEDSDDGSEDDLDENDKNTTLKDWEQSDDDDISAGSEDEDDDISAGSEDEDEDEERAAEEVDKVKRLNVGIHKKAKRIDSVESVKGDNGSLNAKKIVIGGKMSKELEIPYIIEAPKTFEELCSLVDKRSNSDTILIVNRIRKSNPITLAAENRKKVQVFYGVLLQYFAVLANKKPLNVELINMLVKPLIEMSTEIPYFAAICARRRIEITRKQFVESIKNGESSSWPSSKTLCLLRLWSMVFPCSDFRHPVMTPVILLMCEYLMRCPITSGRDIAVGSFLCSMLLSLYHLMELKDLKPLLRINEEVDKISALNFFKLIDMPEDSPFFTTDSFRASVLVTAVETLQGYINAYDNLSSFPEIFLPILRLLLEIAEQKNMPNALRDKIKDVAELIKLKVDEHHTLRRPLQMRKQKPVPIKLLNPKFEENYVKGRDYDPDRERAERKKLKREVRREAKGAAREIRKDNYFLLDVKEKERSLMEKARAEKYGRTKAFLQEQEHAFKSGQLGKGKKRSR*