AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1281510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1281510 MtrunA17_Chr8g0352241 93.307 254 10 3 1 253 1 248 1.27e-163 452
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1281510 AT4G15030.1 60.839 286 68 5 1 253 1 275 1.36e-113 327
Msa1281510 AT4G15030.2 59.655 290 69 6 1 253 1 279 2.44e-110 319
Msa1281510 AT4G15030.3 59.655 290 69 6 1 253 1 279 2.44e-110 319

Find 79 sgRNAs with CRISPR-Local

Find 422 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACCATATGTTTGTAATTT+AGG 0.140943 8_3:+21123042 None:intergenic
AAGGAGCTACGATCAGATTT+TGG 0.151297 8_3:+21129980 None:intergenic
GTGCCTACAGTTAGTTTCTA+TGG 0.176576 8_3:-21128475 Msa1281510:intron
AGAAAATGTGTCTGGTTATT+TGG 0.177001 8_3:-21122749 Msa1281510:three_prime_UTR
AACAAAGGTTTGAGATTTAT+TGG 0.205401 8_3:+21130004 None:intergenic
ATATTTATATCTCCTATTAA+TGG 0.225371 8_3:-21122888 Msa1281510:three_prime_UTR
GCTAGTTGAAAATTTGTAAA+AGG 0.233730 8_3:-21130150 Msa1281510:five_prime_UTR
CGAAGAGAGGATTGCGAAAC+TGG 0.237898 8_3:-21130057 Msa1281510:five_prime_UTR
AACTTTGTCTTGAGCATTCA+TGG 0.244515 8_3:+21123017 None:intergenic
TATCAGGCTTTAATAAAATA+TGG 0.246167 8_3:-21122784 Msa1281510:three_prime_UTR
AGTAAATTTATCCATTTATC+AGG 0.248320 8_3:-21122800 Msa1281510:three_prime_UTR
CAAACAAGCTCTAGTTAAAT+TGG 0.261931 8_3:-21125203 Msa1281510:CDS
GCCTTCTCTCTTCACTTTCT+CGG 0.266922 8_3:+21123960 None:intergenic
ATTTCATAACTGCCATTAAT+AGG 0.298159 8_3:+21122876 None:intergenic
GAAGAATCTGCTACATGTTC+TGG 0.308849 8_3:-21122843 Msa1281510:three_prime_UTR
TGAAAATTTGTAAAAGGATA+AGG 0.316540 8_3:-21130144 Msa1281510:five_prime_UTR
TTGTAATTGCAGACAGTATC+AGG 0.337345 8_3:-21129820 Msa1281510:intron
GAAAATTTGTAAAAGGATAA+GGG 0.391098 8_3:-21130143 Msa1281510:five_prime_UTR
ACACTCTAAGAGAGGGATAT+AGG 0.393990 8_3:-21128402 Msa1281510:intron
ATAGGCAACTTTAAGGTTGA+AGG 0.396027 8_3:+21128439 None:intergenic
ACAAAGGTTTGAGATTTATT+GGG 0.407887 8_3:+21130005 None:intergenic
CTAAAATTGCTTAATATACT+AGG 0.424715 8_3:-21122958 Msa1281510:three_prime_UTR
AGTGAAGAGAGAAGGCGAAA+AGG 0.435037 8_3:-21123953 Msa1281510:intron
GTTATCTTAAATAGATGTGC+AGG 0.436476 8_3:-21124183 Msa1281510:intron
ACCAGCCTTTGCTCCCATGA+TGG 0.442891 8_3:+21127943 None:intergenic
ATGCCTAAATTACAAACATA+TGG 0.450422 8_3:-21123045 Msa1281510:three_prime_UTR
GTCATGTCTGGCAAGGGTAT+TGG 0.455018 8_3:-21126429 Msa1281510:intron
TCATTCACCATGACATCGTT+GGG 0.455151 8_3:-21129955 Msa1281510:exon
ACGGTCAGAGGAAGATGATA+TGG 0.473518 8_3:-21127968 Msa1281510:CDS
TGCCTACAGTTAGTTTCTAT+GGG 0.474512 8_3:-21128474 Msa1281510:intron
TTCATTCACCATGACATCGT+TGG 0.490206 8_3:-21129956 Msa1281510:exon
AAGCATTGCAATGAGAAAGA+TGG 0.496805 8_3:-21125816 Msa1281510:CDS
AACATAGACGAGTTTCTTGA+GGG 0.498571 8_3:-21123189 Msa1281510:CDS
TCCATCATGGGAGCAAAGGC+TGG 0.509246 8_3:-21127944 Msa1281510:CDS
AAGATGATATGGATCCATCA+TGG 0.516160 8_3:-21127957 Msa1281510:CDS
ACAGAGAAGGAAGTCATGTC+TGG 0.518399 8_3:-21126441 Msa1281510:CDS
GTATTTCTTGAGACAAAAGC+TGG 0.523372 8_3:-21123122 Msa1281510:three_prime_UTR
CAAAGGTTTGAGATTTATTG+GGG 0.529267 8_3:+21130006 None:intergenic
GATGTCATGGTGAATGAAGA+AGG 0.541902 8_3:+21129961 None:intergenic
AGAAAGAAGACAACAAAAGC+TGG 0.545344 8_3:-21124121 Msa1281510:CDS
TGGATCCATCATGGGAGCAA+AGG 0.551016 8_3:-21127948 Msa1281510:CDS
GAGACAAAAGCTGGGAAACA+TGG 0.551367 8_3:-21123113 Msa1281510:three_prime_UTR
TAGGCAGTGCTGGGAGCAAG+TGG 0.552481 8_3:-21123081 Msa1281510:three_prime_UTR
GCCGAGAAAGTGAAGAGAGA+AGG 0.555739 8_3:-21123961 Msa1281510:CDS
AACGTGTTGCAAGATTTATA+CGG 0.558185 8_3:-21127987 Msa1281510:intron
AGGATGACAGAAAATGTGTC+TGG 0.564473 8_3:-21122757 Msa1281510:three_prime_UTR
GAAGGAAGTCATGTCTGGCA+AGG 0.573199 8_3:-21126436 Msa1281510:CDS
ACAAGTTCGAAGGACTCGAC+TGG 0.574611 8_3:+21122986 None:intergenic
TAACATAGACGAGTTTCTTG+AGG 0.575423 8_3:-21123190 Msa1281510:CDS
CAGAGATCCCAACGATGTCA+TGG 0.577645 8_3:+21129948 None:intergenic
TGCAAGATTTATACGGTCAG+AGG 0.578191 8_3:-21127980 Msa1281510:intron
CTTTAATAAAATATGGTGAA+AGG 0.583860 8_3:-21122777 Msa1281510:three_prime_UTR
TTTAGTGTGCACAAGTTCGA+AGG 0.584074 8_3:+21122976 None:intergenic
CTACAAGAGGCAGAAAGAGA+AGG 0.586951 8_3:-21124151 Msa1281510:CDS
CAGGGAAACTTAACTACAAG+AGG 0.589540 8_3:-21124164 Msa1281510:CDS
AGATGATATGGATCCATCAT+GGG 0.599854 8_3:-21127956 Msa1281510:CDS
AAGGTTTGAGATTTATTGGG+GGG 0.601439 8_3:+21130008 None:intergenic
CTCTTCTCTGTCGAATATCG+CGG 0.603692 8_3:+21129921 None:intergenic
TCAACTAGCACTTAAACGAG+TGG 0.605889 8_3:+21130164 None:intergenic
GATCGTATGCATTAAGACCT+CGG 0.606015 8_3:+21129790 None:intergenic
TGCTTAATATACTAGGCAGA+AGG 0.608974 8_3:-21122951 Msa1281510:three_prime_UTR
TGGGAGCAAGTGGATAATGC+AGG 0.609766 8_3:-21123071 Msa1281510:three_prime_UTR
CAAGTTCGAAGGACTCGACT+GGG 0.609935 8_3:+21122987 None:intergenic
TCTCAGATGGAGAACAGAGA+AGG 0.612843 8_3:-21126454 Msa1281510:CDS
AGATGGATTAGCAAGCTATG+AGG 0.614684 8_3:-21125799 Msa1281510:intron
AAGGAAGTCATGTCTGGCAA+GGG 0.620125 8_3:-21126435 Msa1281510:CDS
AAAAGCTGGACAGAAGAAAG+AGG 0.623216 8_3:-21124107 Msa1281510:intron
AGATAAAGACACTCTAAGAG+AGG 0.631391 8_3:-21128410 Msa1281510:CDS
GATAAAGACACTCTAAGAGA+GGG 0.632257 8_3:-21128409 Msa1281510:CDS
GACATGTCGCAGTACAAGAG+TGG 0.636359 8_3:-21127221 Msa1281510:CDS
GTCGCAGTACAAGAGTGGTA+AGG 0.639627 8_3:-21127216 Msa1281510:intron
TTATCTTAAATAGATGTGCA+GGG 0.641460 8_3:-21124182 Msa1281510:intron
TATTTCTTGAGACAAAAGCT+GGG 0.642232 8_3:-21123121 Msa1281510:three_prime_UTR
TTAAATTGGTAGCATGTGAG+AGG 0.651772 8_3:-21125189 Msa1281510:intron
CAGTATCAGGCTCATATCCG+AGG 0.659104 8_3:-21129807 Msa1281510:CDS
GAGTGATGATGATCTAGACG+AGG 0.661201 8_3:-21123984 Msa1281510:CDS
AAAGGTTTGAGATTTATTGG+GGG 0.697684 8_3:+21130007 None:intergenic
AGTGATGATGATCTAGACGA+GGG 0.698206 8_3:-21123983 Msa1281510:CDS
ACATAGACGAGTTTCTTGAG+GGG 0.714392 8_3:-21123188 Msa1281510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAGAAAAAATAAAAAA+TGG + chr8_3:21123798-21123817 None:intergenic 10.0%
!!! ATTTTTTATTTTTTCTTGTT+TGG - chr8_3:21123797-21123816 Msa1281510:intron 10.0%
!!! TTTTTTATTTTTTCTTGTTT+GGG - chr8_3:21123798-21123817 Msa1281510:intron 10.0%
!!! TATGAATATCTTTTATTATT+GGG - chr8_3:21124818-21124837 Msa1281510:intron 10.0%
!! AAACCTATTAAAATTAAATA+AGG - chr8_3:21126215-21126234 Msa1281510:intron 10.0%
!! TACAAAAAAAAAAAAACTAT+GGG + chr8_3:21126362-21126381 None:intergenic 10.0%
!!! TTTTCTTTTTTAATAATTGA+AGG - chr8_3:21128666-21128685 Msa1281510:intron 10.0%
!!! AAAACATTTTCTATTATTAT+TGG + chr8_3:21129449-21129468 None:intergenic 10.0%
!!! TGAAAATATTTGTTAATTAA+AGG + chr8_3:21129636-21129655 None:intergenic 10.0%
!!! TTTAATTAACAAATATTTTC+AGG - chr8_3:21129635-21129654 Msa1281510:intron 10.0%
!!! GTATGAATATCTTTTATTAT+TGG - chr8_3:21124817-21124836 Msa1281510:intron 15.0%
!!! ATGAATATCTTTTATTATTG+GGG - chr8_3:21124819-21124838 Msa1281510:intron 15.0%
!! TAATAAAGATATTTATATCG+AGG - chr8_3:21125046-21125065 Msa1281510:intron 15.0%
!!! TTTTATTACTTATGTGATAT+TGG - chr8_3:21125362-21125381 Msa1281510:intron 15.0%
!!! TTGCATTTAGAATATTTTTT+TGG - chr8_3:21125728-21125747 Msa1281510:intron 15.0%
!!! TGCATTTAGAATATTTTTTT+GGG - chr8_3:21125729-21125748 Msa1281510:intron 15.0%
!! CAACTATTAAAAATTAAGTA+AGG + chr8_3:21125802-21125821 None:intergenic 15.0%
!! AATTAAACAAATTTGAATTG+AGG + chr8_3:21125867-21125886 None:intergenic 15.0%
!! AAGATAAAATTAACAAAATC+TGG + chr8_3:21125993-21126012 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr8_3:21126124-21126143 Msa1281510:intron 15.0%
!!! AGAAGTAATTTTTTTTTTGT+AGG - chr8_3:21126185-21126204 Msa1281510:intron 15.0%
!!! GAAGTAATTTTTTTTTTGTA+GGG - chr8_3:21126186-21126205 Msa1281510:intron 15.0%
!!! AGTCCTTATTTAATTTTAAT+AGG + chr8_3:21126221-21126240 None:intergenic 15.0%
!! ACAAAAAAAAAAAAACTATG+GGG + chr8_3:21126361-21126380 None:intergenic 15.0%
!! CTACAAAAAAAAAAAAACTA+TGG + chr8_3:21126363-21126382 None:intergenic 15.0%
!! TTATGAAGAAGATTAAAAAT+TGG + chr8_3:21126853-21126872 None:intergenic 15.0%
!!! AATGCATTATGTTATTTATT+AGG - chr8_3:21127386-21127405 Msa1281510:intron 15.0%
!! ATTAAAAGTTAAAACATTTC+TGG - chr8_3:21128166-21128185 Msa1281510:intron 15.0%
!!! TATTTTCTATTTTTGAATGA+AGG + chr8_3:21128240-21128259 None:intergenic 15.0%
!! AGATTTAATTAAACTAATAC+AGG + chr8_3:21128310-21128329 None:intergenic 15.0%
!!! AATAACTTGTAATATTATTG+AGG + chr8_3:21128358-21128377 None:intergenic 15.0%
!!! TGTTCATTTAAAGATTATTT+TGG - chr8_3:21128563-21128582 Msa1281510:intron 15.0%
!!! TTTTGGTTTCATTTATTTAT+TGG - chr8_3:21128706-21128725 Msa1281510:intron 15.0%
!! TAATAGTTAACTTAAATGTT+TGG - chr8_3:21129555-21129574 Msa1281510:intron 15.0%
!! ATATTTATATCTCCTATTAA+TGG - chr8_3:21130023-21130042 Msa1281510:five_prime_UTR 15.0%
!! TGAAAATTTGTAAAAGGATA+AGG - chr8_3:21122767-21122786 Msa1281510:three_prime_UTR 20.0%
!! GAAAATTTGTAAAAGGATAA+GGG - chr8_3:21122768-21122787 Msa1281510:three_prime_UTR 20.0%
!!! AAAAGCAAAACCTAATTTTT+TGG - chr8_3:21122824-21122843 Msa1281510:three_prime_UTR 20.0%
!!! AAAGCAAAACCTAATTTTTT+GGG - chr8_3:21122825-21122844 Msa1281510:three_prime_UTR 20.0%
!! AAAAAGTTTATCAACGATTA+CGG - chr8_3:21123149-21123168 Msa1281510:three_prime_UTR 20.0%
!!! CAATTTTCTTCTAAATAAGT+TGG - chr8_3:21123504-21123523 Msa1281510:intron 20.0%
!!! CATAATTTGAAACATGAAAA+GGG + chr8_3:21123751-21123770 None:intergenic 20.0%
!!! ACATAATTTGAAACATGAAA+AGG + chr8_3:21123752-21123771 None:intergenic 20.0%
!! TAATAGATGCAATTTCTTAT+TGG - chr8_3:21124034-21124053 Msa1281510:intron 20.0%
!! AATAGATGCAATTTCTTATT+GGG - chr8_3:21124035-21124054 Msa1281510:intron 20.0%
!! TTTGCATAGAAATAGAAAAA+CGG - chr8_3:21124680-21124699 Msa1281510:intron 20.0%
!!! TTATTATGCTAAGCTTTTTA+AGG - chr8_3:21124997-21125016 Msa1281510:intron 20.0%
!! TAAAAAAATGAATTGTGCAA+AGG + chr8_3:21125028-21125047 None:intergenic 20.0%
!!! TATTTTTGATTCCTAGAAAT+TGG - chr8_3:21125106-21125125 Msa1281510:intron 20.0%
!!! ATTTTTGATTCCTAGAAATT+GGG - chr8_3:21125107-21125126 Msa1281510:intron 20.0%
!!! CACTATTTTTGTTAAAAACA+TGG + chr8_3:21125177-21125196 None:intergenic 20.0%
!! AGTGTTTATAGTCTATTATT+AGG - chr8_3:21125193-21125212 Msa1281510:CDS 20.0%
!! GTGTTTATAGTCTATTATTA+GGG - chr8_3:21125194-21125213 Msa1281510:CDS 20.0%
!! TGTTTATAGTCTATTATTAG+GGG - chr8_3:21125195-21125214 Msa1281510:CDS 20.0%
!!! ATTTGCCTAATTTTGATTAT+TGG - chr8_3:21125320-21125339 Msa1281510:intron 20.0%
!!! TTTGCCTAATTTTGATTATT+GGG - chr8_3:21125321-21125340 Msa1281510:intron 20.0%
!! ATCACATAAGTAATAAAACA+GGG + chr8_3:21125360-21125379 None:intergenic 20.0%
!! TATCACATAAGTAATAAAAC+AGG + chr8_3:21125361-21125380 None:intergenic 20.0%
!!! TTGGGTTTTTATTATAGATT+TGG - chr8_3:21125387-21125406 Msa1281510:intron 20.0%
!!! ATAGATTTGGTTTAATAAGT+TGG - chr8_3:21125400-21125419 Msa1281510:intron 20.0%
!!! TTTTGGGTTAAATATGTTTT+TGG - chr8_3:21125745-21125764 Msa1281510:intron 20.0%
!!! TTAAAGGTCTCAATTTTATA+GGG + chr8_3:21125772-21125791 None:intergenic 20.0%
!! TGAGTGCAAAAAAAAATTTA+AGG + chr8_3:21125832-21125851 None:intergenic 20.0%
!!! TAAACAAATTTTGTTGTAAC+AGG - chr8_3:21126152-21126171 Msa1281510:intron 20.0%
!!! AAACAAATTTTGTTGTAACA+GGG - chr8_3:21126153-21126172 Msa1281510:intron 20.0%
!!! AATAGGGTTAAATATGTTTT+TGG + chr8_3:21126273-21126292 None:intergenic 20.0%
!!! TTAACCCTATTTTTTTTTTG+TGG - chr8_3:21126282-21126301 Msa1281510:intron 20.0%
!! CTAACCACAAAAAAAAAATA+GGG + chr8_3:21126289-21126308 None:intergenic 20.0%
!!! AATTGCATAATTTTGTAGAT+TGG - chr8_3:21126434-21126453 Msa1281510:CDS 20.0%
!! AGAAGATTAAAAATTGGAAT+TGG + chr8_3:21126847-21126866 None:intergenic 20.0%
!! AAAGATTGATTAATGGTAAT+GGG + chr8_3:21127150-21127169 None:intergenic 20.0%
!! AAAAGATTGATTAATGGTAA+TGG + chr8_3:21127151-21127170 None:intergenic 20.0%
!! TAGTCAAAAAGATTGATTAA+TGG + chr8_3:21127157-21127176 None:intergenic 20.0%
!! ATCGTCAGAAATTATAATAA+GGG + chr8_3:21127271-21127290 None:intergenic 20.0%
!! AGATATAATGTAAATTACAG+CGG - chr8_3:21127299-21127318 Msa1281510:intron 20.0%
!! ATCAGTTAATGAAGAAATTA+AGG - chr8_3:21127832-21127851 Msa1281510:intron 20.0%
!! TTATATACAATAACAAGAAG+AGG + chr8_3:21127999-21128018 None:intergenic 20.0%
!! ATTTGAACACATCTAATTTA+AGG - chr8_3:21128035-21128054 Msa1281510:intron 20.0%
!! TTTGAACACATCTAATTTAA+GGG - chr8_3:21128036-21128055 Msa1281510:intron 20.0%
!! TAATAATAAGACATTTCCAA+AGG + chr8_3:21128150-21128169 None:intergenic 20.0%
!! TAGTTCTTACTAAAAGAAAT+GGG + chr8_3:21129188-21129207 None:intergenic 20.0%
!! AATCACAACAAATAATTTCA+CGG + chr8_3:21129249-21129268 None:intergenic 20.0%
!! TTACTTACAATATTGTCTAA+TGG - chr8_3:21129365-21129384 Msa1281510:intron 20.0%
!! TACTTACAATATTGTCTAAT+GGG - chr8_3:21129366-21129385 Msa1281510:intron 20.0%
!! TTAACTATTAAAAAGCAAGT+CGG + chr8_3:21129545-21129564 None:intergenic 20.0%
!! AATGAATCAGTTAAAAATCA+GGG + chr8_3:21129755-21129774 None:intergenic 20.0%
!! TTACCATATGTTTGTAATTT+AGG + chr8_3:21129872-21129891 None:intergenic 20.0%
!! CTAAAATTGCTTAATATACT+AGG - chr8_3:21129953-21129972 Msa1281510:exon 20.0%
!! AGTAAATTTATCCATTTATC+AGG - chr8_3:21130111-21130130 Msa1281510:five_prime_UTR 20.0%
!!! TTTTATTAAAGCCTGATAAA+TGG + chr8_3:21130125-21130144 None:intergenic 20.0%
!!! TATCAGGCTTTAATAAAATA+TGG - chr8_3:21130127-21130146 Msa1281510:five_prime_UTR 20.0%
!! CTTTAATAAAATATGGTGAA+AGG - chr8_3:21130134-21130153 Msa1281510:five_prime_UTR 20.0%
! GCTAGTTGAAAATTTGTAAA+AGG - chr8_3:21122761-21122780 Msa1281510:three_prime_UTR 25.0%
!! ACAAAGGTTTGAGATTTATT+GGG + chr8_3:21122909-21122928 None:intergenic 25.0%
!! AACAAAGGTTTGAGATTTAT+TGG + chr8_3:21122910-21122929 None:intergenic 25.0%
!!! AATCGTTGATAAACTTTTTG+TGG + chr8_3:21123148-21123167 None:intergenic 25.0%
! ATTACAGTAACCAATGAAAT+CGG + chr8_3:21123264-21123283 None:intergenic 25.0%
! GAAAACATCTTACAACTTAT+AGG + chr8_3:21123353-21123372 None:intergenic 25.0%
!! GATGTTTTCATAAGCTATTT+TGG - chr8_3:21123364-21123383 Msa1281510:intron 25.0%
! TTCAAATAAGTCAATCCTAA+TGG - chr8_3:21123464-21123483 Msa1281510:intron 25.0%
! ATAAATGATAAGTGTCCATT+AGG + chr8_3:21123482-21123501 None:intergenic 25.0%
!!! TTTCTTCTAAATAAGTTGGT+TGG - chr8_3:21123508-21123527 Msa1281510:intron 25.0%
!!! TGTGATTCTAACTGTTTTTT+CGG - chr8_3:21123769-21123788 Msa1281510:intron 25.0%
!!! TATTTTTTCTTGTTTGGGAA+TGG - chr8_3:21123803-21123822 Msa1281510:intron 25.0%
!!! CAAATTTTGAGCTATTGATT+TGG - chr8_3:21123841-21123860 Msa1281510:intron 25.0%
!! CAATCTTTTTGTTCTTCAAT+TGG + chr8_3:21124009-21124028 None:intergenic 25.0%
! CAATTGAAGAACAAAAAGAT+TGG - chr8_3:21124007-21124026 Msa1281510:intron 25.0%
! TTAATCTCAGAAGAATTGAT+CGG + chr8_3:21124410-21124429 None:intergenic 25.0%
!!! TGTTTTAATAGGCAACTTTA+AGG + chr8_3:21124482-21124501 None:intergenic 25.0%
!!! GTGTCTTTATCTGTTTTAAT+AGG + chr8_3:21124493-21124512 None:intergenic 25.0%
! TTGCATAGAAATAGAAAAAC+GGG - chr8_3:21124681-21124700 Msa1281510:intron 25.0%
! AAAATAAAACTAAAACCCCA+AGG - chr8_3:21124728-21124747 Msa1281510:intron 25.0%
! AATACTGGTAATACTAACAA+AGG + chr8_3:21125090-21125109 None:intergenic 25.0%
!! TTTCTAGGAATCAAAAATAC+TGG + chr8_3:21125105-21125124 None:intergenic 25.0%
!! ATAAAACAGGGTGATATTTT+TGG + chr8_3:21125348-21125367 None:intergenic 25.0%
!! TCTAAAATGGCTTATATGAA+AGG - chr8_3:21125530-21125549 Msa1281510:intron 25.0%
!! TGCTTTTGATACACAAATAT+AGG - chr8_3:21125584-21125603 Msa1281510:intron 25.0%
!! GCTTTTGATACACAAATATA+GGG - chr8_3:21125585-21125604 Msa1281510:intron 25.0%
!! CTTAAAGGTCTCAATTTTAT+AGG + chr8_3:21125773-21125792 None:intergenic 25.0%
! TAAGTAAGGACTAAACTTAA+AGG + chr8_3:21125788-21125807 None:intergenic 25.0%
! AAACAAATTTGAATTGAGGA+GGG + chr8_3:21125863-21125882 None:intergenic 25.0%
! TAAACAAATTTGAATTGAGG+AGG + chr8_3:21125864-21125883 None:intergenic 25.0%
!! TTAGAAGTTCCCAATTTTAT+AGG - chr8_3:21126245-21126264 Msa1281510:intron 25.0%
!! TAGAAGTTCCCAATTTTATA+GGG - chr8_3:21126246-21126265 Msa1281510:intron 25.0%
!!! TTTTTGGTCCCTATAAAATT+GGG + chr8_3:21125761-21125780 None:intergenic 25.0%
! GCTAACCACAAAAAAAAAAT+AGG + chr8_3:21126290-21126309 None:intergenic 25.0%
!! TATGCGGATTATATCTTTAA+CGG - chr8_3:21126398-21126417 Msa1281510:intron 25.0%
!! GATGTTGATTATGAGTTTAA+TGG + chr8_3:21126649-21126668 None:intergenic 25.0%
! GACAAATTAAAACTTAACTC+TGG - chr8_3:21126885-21126904 Msa1281510:intron 25.0%
! AATTAAAACTTAACTCTGGA+AGG - chr8_3:21126889-21126908 Msa1281510:intron 25.0%
! TGTTAACTTTACGATTGAAT+AGG + chr8_3:21127037-21127056 None:intergenic 25.0%
!! AACATATCACATAATTTTGC+AGG - chr8_3:21127053-21127072 Msa1281510:intron 25.0%
!!! ATCAATCTTTTTGACTAGTT+TGG - chr8_3:21127160-21127179 Msa1281510:intron 25.0%
! AAACATTAGGAAAAACAACT+AGG - chr8_3:21127240-21127259 Msa1281510:intron 25.0%
! GATCGTCAGAAATTATAATA+AGG + chr8_3:21127272-21127291 None:intergenic 25.0%
! TATTATAATTTCTGACGATC+TGG - chr8_3:21127272-21127291 Msa1281510:intron 25.0%
! AACGTGAAGCAAATAAATAA+AGG + chr8_3:21127652-21127671 None:intergenic 25.0%
! GTGAATACATAACAAATCAT+GGG - chr8_3:21127868-21127887 Msa1281510:intron 25.0%
! CAAATTACAAAAATAGTACG+TGG + chr8_3:21128420-21128439 None:intergenic 25.0%
! TCACTTTCAAAACAGATTTA+TGG + chr8_3:21128446-21128465 None:intergenic 25.0%
! TAAATGAACACATAAATAGC+AGG + chr8_3:21128553-21128572 None:intergenic 25.0%
! TTTAATAATTGAAGGTTGTC+TGG - chr8_3:21128674-21128693 Msa1281510:intron 25.0%
!! TTGTCTGGTAAATCAAATTT+TGG - chr8_3:21128689-21128708 Msa1281510:intron 25.0%
! TTATCTTAAATAGATGTGCA+GGG - chr8_3:21128729-21128748 Msa1281510:intron 25.0%
! AATAAGTGGAAAATAAGAAG+GGG + chr8_3:21128858-21128877 None:intergenic 25.0%
! CAATAAGTGGAAAATAAGAA+GGG + chr8_3:21128859-21128878 None:intergenic 25.0%
! TCAATAAGTGGAAAATAAGA+AGG + chr8_3:21128860-21128879 None:intergenic 25.0%
!! ACGTATTTTCATTCAATAAG+TGG + chr8_3:21128872-21128891 None:intergenic 25.0%
! GATTGAATACTTTCAATTGT+AGG - chr8_3:21128893-21128912 Msa1281510:intron 25.0%
!! TGAAGTAAAATAGCCTTAAA+AGG + chr8_3:21128993-21129012 None:intergenic 25.0%
!!! TTTTAAGGCTATTTTACTTC+AGG - chr8_3:21128992-21129011 Msa1281510:intron 25.0%
!! TATGAAACTCTCTGTATTTT+CGG - chr8_3:21129016-21129035 Msa1281510:intron 25.0%
!! CTAGTTCTTACTAAAAGAAA+TGG + chr8_3:21129189-21129208 None:intergenic 25.0%
!! CATTTCTTTTAGTAAGAACT+AGG - chr8_3:21129187-21129206 Msa1281510:intron 25.0%
!! TGTATTTGCATCTTTTGTAA+TGG - chr8_3:21129312-21129331 Msa1281510:intron 25.0%
! ACAATGTTTCACATCATAAT+AGG + chr8_3:21129423-21129442 None:intergenic 25.0%
!! AATGTTTTATATGCCAACAA+TGG - chr8_3:21129461-21129480 Msa1281510:intron 25.0%
!! ATGTTTTATATGCCAACAAT+GGG - chr8_3:21129462-21129481 Msa1281510:intron 25.0%
! TAACTATTAAAAAGCAAGTC+GGG + chr8_3:21129544-21129563 None:intergenic 25.0%
!!! AACAAATATTTTCAGGAAAG+AGG - chr8_3:21129642-21129661 Msa1281510:intron 25.0%
!!! ACAAATATTTTCAGGAAAGA+GGG - chr8_3:21129643-21129662 Msa1281510:intron 25.0%
!! ATCATCAATTTTATGATCAC+TGG + chr8_3:21129681-21129700 None:intergenic 25.0%
! CAATGAATCAGTTAAAAATC+AGG + chr8_3:21129756-21129775 None:intergenic 25.0%
! ATGCCTAAATTACAAACATA+TGG - chr8_3:21129866-21129885 Msa1281510:intron 25.0%
! ATTTCATAACTGCCATTAAT+AGG + chr8_3:21130038-21130057 None:intergenic 25.0%
!! AAATTAGGTTTTGCTTTTGC+TGG + chr8_3:21122822-21122841 None:intergenic 30.0%
TCGATTCTACCCAAAAAATT+AGG + chr8_3:21122837-21122856 None:intergenic 30.0%
! AAAGGTTTGAGATTTATTGG+GGG + chr8_3:21122907-21122926 None:intergenic 30.0%
! CAAAGGTTTGAGATTTATTG+GGG + chr8_3:21122908-21122927 None:intergenic 30.0%
GATTTATCGAAGAATGAATG+AGG + chr8_3:21123050-21123069 None:intergenic 30.0%
ATGAGAAACAGAAACAAGTT+AGG + chr8_3:21123072-21123091 None:intergenic 30.0%
!! TGTTTTTGAACCGATTTCAT+TGG - chr8_3:21123251-21123270 Msa1281510:CDS 30.0%
ACTTATTTGAACTTCTCAAC+TGG + chr8_3:21123455-21123474 None:intergenic 30.0%
!!! TTTTGAGCTATTGATTTGGT+TGG - chr8_3:21123845-21123864 Msa1281510:intron 30.0%
TCTTAATGTCCTACAGTAAA+TGG - chr8_3:21123868-21123887 Msa1281510:intron 30.0%
ACATGCATGTTTAATAGCAA+GGG + chr8_3:21123960-21123979 None:intergenic 30.0%
! TCTTTTTGTTCTTCAATTGG+TGG + chr8_3:21124006-21124025 None:intergenic 30.0%
!! TTTTGATTCAAATAGCCTTC+AGG - chr8_3:21124170-21124189 Msa1281510:CDS 30.0%
!!! ATAAAAGCCCTTTTTCAATG+TGG + chr8_3:21124206-21124225 None:intergenic 30.0%
TGACATATTGTCATGGTAAA+AGG + chr8_3:21124323-21124342 None:intergenic 30.0%
TGCTGTATGTAAGATAATAC+TGG - chr8_3:21124546-21124565 Msa1281510:intron 30.0%
AGAAATGTAGTGCATGAAAT+TGG + chr8_3:21124574-21124593 None:intergenic 30.0%
AAGCTTATCTTACATATGAC+AGG + chr8_3:21124634-21124653 None:intergenic 30.0%
!! AGTTGATAGAAAAGATGGTA+AGG + chr8_3:21124865-21124884 None:intergenic 30.0%
!! AGACAAGTTGATAGAAAAGA+TGG + chr8_3:21124870-21124889 None:intergenic 30.0%
TATAAATCTTGCAACACGTT+TGG + chr8_3:21124924-21124943 None:intergenic 30.0%
AACGTGTTGCAAGATTTATA+CGG - chr8_3:21124924-21124943 Msa1281510:intron 30.0%
!!! AATTGGGCAAATGTTGATTT+TGG - chr8_3:21125123-21125142 Msa1281510:intron 30.0%
TGAAGACACTATTTGGTTAA+AGG - chr8_3:21125252-21125271 Msa1281510:intron 30.0%
TGGTCCCAATAATCAAAATT+AGG + chr8_3:21125328-21125347 None:intergenic 30.0%
TACTTATGTGATATTGGCAT+TGG - chr8_3:21125368-21125387 Msa1281510:intron 30.0%
ACTTATGTGATATTGGCATT+GGG - chr8_3:21125369-21125388 Msa1281510:intron 30.0%
! GATTTGGTTTAATAAGTTGG+AGG - chr8_3:21125403-21125422 Msa1281510:intron 30.0%
! AATGCATTAGCTCTTACATA+TGG + chr8_3:21125432-21125451 None:intergenic 30.0%
CAGTATCTTGAAAGGATTTA+AGG + chr8_3:21125663-21125682 None:intergenic 30.0%
!!! TTTGCGATAATTTTTTGCAG+AGG + chr8_3:21125955-21125974 None:intergenic 30.0%
!!! GTTTTTGGTCCCTATAAAAT+TGG + chr8_3:21125760-21125779 None:intergenic 30.0%
!! GAAATAGTTCTAGTTAAACG+TGG + chr8_3:21126563-21126582 None:intergenic 30.0%
TCTATTTGCCTGTGAAAAAT+AGG + chr8_3:21126700-21126719 None:intergenic 30.0%
CACAGGCAAATAGAATTTAA+CGG - chr8_3:21126706-21126725 Msa1281510:intron 30.0%
AGGAAATAGATGTAAACCAT+GGG + chr8_3:21126766-21126785 None:intergenic 30.0%
AAGGAAATAGATGTAAACCA+TGG + chr8_3:21126767-21126786 None:intergenic 30.0%
! TTTCCTTGTCATTTCCTATA+TGG - chr8_3:21126780-21126799 Msa1281510:intron 30.0%
GACAGGTAAATGAAAAATCT+AGG + chr8_3:21126949-21126968 None:intergenic 30.0%
TTGAAGATAACCCAATCAAA+AGG - chr8_3:21127199-21127218 Msa1281510:intron 30.0%
TGAAGATAACCCAATCAAAA+GGG - chr8_3:21127200-21127219 Msa1281510:intron 30.0%
CATAATGCATTCCAAAAACA+GGG + chr8_3:21127377-21127396 None:intergenic 30.0%
ACATAATGCATTCCAAAAAC+AGG + chr8_3:21127378-21127397 None:intergenic 30.0%
TGTTTGAGAGAGTAAGAAAA+GGG + chr8_3:21127542-21127561 None:intergenic 30.0%
ATAGATTGATCAATCAAGAG+TGG + chr8_3:21127565-21127584 None:intergenic 30.0%
!! AATAACTTTAGCTCTACTTG+AGG - chr8_3:21127586-21127605 Msa1281510:intron 30.0%
!! ATAACTTTAGCTCTACTTGA+GGG - chr8_3:21127587-21127606 Msa1281510:intron 30.0%
GAAGCAAATAAATAAAGGAG+TGG + chr8_3:21127647-21127666 None:intergenic 30.0%
ATTTATTTGCTTCACGTTAC+AGG - chr8_3:21127654-21127673 Msa1281510:intron 30.0%
!!! AACTTTTGTTACTTTGAAGC+TGG - chr8_3:21127679-21127698 Msa1281510:intron 30.0%
! CAAACAAGCTCTAGTTAAAT+TGG - chr8_3:21127708-21127727 Msa1281510:intron 30.0%
CGTGAATACATAACAAATCA+TGG - chr8_3:21127867-21127886 Msa1281510:intron 30.0%
TGGGTGTATTGAAATATCAA+TGG - chr8_3:21127887-21127906 Msa1281510:intron 30.0%
AACATTTAACAAACATGGCA+GGG + chr8_3:21127972-21127991 None:intergenic 30.0%
AAACATTTAACAAACATGGC+AGG + chr8_3:21127973-21127992 None:intergenic 30.0%
GAGCAAACATTTAACAAACA+TGG + chr8_3:21127977-21127996 None:intergenic 30.0%
!!! TTTAAGGGTTTGTTTTGCAA+TGG - chr8_3:21128051-21128070 Msa1281510:intron 30.0%
AAAGTTCTTGTTAGTTGCAT+GGG - chr8_3:21128080-21128099 Msa1281510:intron 30.0%
ACAAAAATAGTACGTGGAAA+TGG + chr8_3:21128414-21128433 None:intergenic 30.0%
ATTGATGTTACTCATCACTT+TGG - chr8_3:21128603-21128622 Msa1281510:intron 30.0%
AAAACCCTTAATGACTTGAA+AGG + chr8_3:21128641-21128660 None:intergenic 30.0%
GTTATCTTAAATAGATGTGC+AGG - chr8_3:21128728-21128747 Msa1281510:intron 30.0%
!! AAGGTTTGAAGTTCCTTTTA+AGG - chr8_3:21128977-21128996 Msa1281510:intron 30.0%
!!! TCATCATTTGTTTTTGTTGC+AGG - chr8_3:21129040-21129059 Msa1281510:intron 30.0%
! TCTTTTAGTAAGAACTAGGA+AGG - chr8_3:21129191-21129210 Msa1281510:intron 30.0%
GCACTTATCATTGTAAATCT+AGG + chr8_3:21129217-21129236 None:intergenic 30.0%
!! TTATTTGTTGTGATTGACTC+TGG - chr8_3:21129254-21129273 Msa1281510:intron 30.0%
!! TGGTAGTTTTACAAGTATGT+TGG - chr8_3:21129274-21129293 Msa1281510:intron 30.0%
!!! CAAGAAATACTTTTCAGGTA+TGG + chr8_3:21129779-21129798 None:intergenic 30.0%
! TGTCTCAAGAAATACTTTTC+AGG + chr8_3:21129784-21129803 None:intergenic 30.0%
TATTTCTTGAGACAAAAGCT+GGG - chr8_3:21129790-21129809 Msa1281510:CDS 30.0%
GGAAACATGGAAAAAAGATT+AGG - chr8_3:21129811-21129830 Msa1281510:CDS 30.0%
AGAAAATGTGTCTGGTTATT+TGG - chr8_3:21130162-21130181 Msa1281510:five_prime_UTR 30.0%
!! TTTTGCTGGTTATACAGGTA+AGG + chr8_3:21122808-21122827 None:intergenic 35.0%
!! TTTGCTTTTGCTGGTTATAC+AGG + chr8_3:21122813-21122832 None:intergenic 35.0%
! AAGGTTTGAGATTTATTGGG+GGG + chr8_3:21122906-21122925 None:intergenic 35.0%
TATCGAAGAATGAATGAGGA+GGG + chr8_3:21123046-21123065 None:intergenic 35.0%
TTATCGAAGAATGAATGAGG+AGG + chr8_3:21123047-21123066 None:intergenic 35.0%
TTGTAATTGCAGACAGTATC+AGG - chr8_3:21123091-21123110 Msa1281510:three_prime_UTR 35.0%
!!! AAGCTATTTTGGTGAGCTTA+TGG - chr8_3:21123375-21123394 Msa1281510:intron 35.0%
! AAGCTTTTCATGATAGCTTC+TGG + chr8_3:21123608-21123627 None:intergenic 35.0%
TTGTTTGGGAATGGACAATA+AGG - chr8_3:21123812-21123831 Msa1281510:intron 35.0%
GTTCATCATCCATTTACTGT+AGG + chr8_3:21123880-21123899 None:intergenic 35.0%
ATGAACAGTCTTCTCCATTA+AGG - chr8_3:21123894-21123913 Msa1281510:intron 35.0%
AGTCTTCTCCATTAAGGAAA+AGG - chr8_3:21123900-21123919 Msa1281510:intron 35.0%
TTCTCCATTAAGGAAAAGGA+AGG - chr8_3:21123904-21123923 Msa1281510:intron 35.0%
CATGCATGTTTAATAGCAAG+GGG + chr8_3:21123959-21123978 None:intergenic 35.0%
CACATGCATGTTTAATAGCA+AGG + chr8_3:21123961-21123980 None:intergenic 35.0%
TTTCTTATTGGGTTTGTGAC+TGG - chr8_3:21124046-21124065 Msa1281510:intron 35.0%
TTCTTATTGGGTTTGTGACT+GGG - chr8_3:21124047-21124066 Msa1281510:intron 35.0%
TGGGATGCTTAAATTGGTTA+CGG - chr8_3:21124066-21124085 Msa1281510:intron 35.0%
TGCTTAAATTGGTTACGGAT+TGG - chr8_3:21124071-21124090 Msa1281510:intron 35.0%
TTCAAATAGCCTTCAGGATT+TGG - chr8_3:21124176-21124195 Msa1281510:intron 35.0%
TTGGTTGTCCACATTGAAAA+AGG - chr8_3:21124195-21124214 Msa1281510:intron 35.0%
TGGTTGTCCACATTGAAAAA+GGG - chr8_3:21124196-21124215 Msa1281510:intron 35.0%
CTGATTCTGACATATTGTCA+TGG + chr8_3:21124330-21124349 None:intergenic 35.0%
! TGCCTACAGTTAGTTTCTAT+GGG - chr8_3:21124437-21124456 Msa1281510:intron 35.0%
TTCCCATAGAAACTAACTGT+AGG + chr8_3:21124442-21124461 None:intergenic 35.0%
!! ATAGGCAACTTTAAGGTTGA+AGG + chr8_3:21124475-21124494 None:intergenic 35.0%
! AGATAAAGACACTCTAAGAG+AGG - chr8_3:21124501-21124520 Msa1281510:intron 35.0%
! GATAAAGACACTCTAAGAGA+GGG - chr8_3:21124502-21124521 Msa1281510:intron 35.0%
!! CAGGTTTTGTGTTACAAAAG+AGG + chr8_3:21124615-21124634 None:intergenic 35.0%
ATTTCAATAGTCATGCCTTG+GGG + chr8_3:21124746-21124765 None:intergenic 35.0%
GATTTCAATAGTCATGCCTT+GGG + chr8_3:21124747-21124766 None:intergenic 35.0%
TGATTTCAATAGTCATGCCT+TGG + chr8_3:21124748-21124767 None:intergenic 35.0%
GAAAAGATGGTAAGGAAGAA+AGG + chr8_3:21124857-21124876 None:intergenic 35.0%
AAGATGATATGGATCCATCA+TGG - chr8_3:21124954-21124973 Msa1281510:intron 35.0%
AGATGATATGGATCCATCAT+GGG - chr8_3:21124955-21124974 Msa1281510:intron 35.0%
TCAACATTTGCCCAATTTCT+AGG + chr8_3:21125120-21125139 None:intergenic 35.0%
TCAAGACTGAAGACACTATT+TGG - chr8_3:21125245-21125264 Msa1281510:intron 35.0%
GCTTATATGAAAGGTCAGAA+AGG - chr8_3:21125539-21125558 Msa1281510:intron 35.0%
!! GTCTGAGATCTCATTTTATG+CGG - chr8_3:21126382-21126401 Msa1281510:intron 35.0%
!!! TTTTGTAGATTGGTCTCAGA+TGG - chr8_3:21126444-21126463 Msa1281510:CDS 35.0%
! AGTTCTAGTTAAACGTGGAA+TGG + chr8_3:21126558-21126577 None:intergenic 35.0%
!! TGAGTAGACCTATTTTTCAC+AGG - chr8_3:21126689-21126708 Msa1281510:intron 35.0%
GTACCATATAGGAAATGACA+AGG + chr8_3:21126786-21126805 None:intergenic 35.0%
AAGTATCTTGGGTACCATAT+AGG + chr8_3:21126797-21126816 None:intergenic 35.0%
TCGACAGTCTTAAGTATCTT+GGG + chr8_3:21126808-21126827 None:intergenic 35.0%
TTCGACAGTCTTAAGTATCT+TGG + chr8_3:21126809-21126828 None:intergenic 35.0%
TGCAACTATGCAGTTAGAAT+AGG + chr8_3:21126971-21126990 None:intergenic 35.0%
! TTTGCAGGCCAATTTTTATG+CGG - chr8_3:21127068-21127087 Msa1281510:intron 35.0%
! GCTTGTTACCGCATAAAAAT+TGG + chr8_3:21127079-21127098 None:intergenic 35.0%
! AAGCATTGCAATGAGAAAGA+TGG - chr8_3:21127095-21127114 Msa1281510:intron 35.0%
!!! TTTTGACTAGTTTGGTAGAG+AGG - chr8_3:21127168-21127187 Msa1281510:intron 35.0%
TGAAGAATGCAGCAAACATT+AGG - chr8_3:21127227-21127246 Msa1281510:CDS 35.0%
!!! ATTGTTGTTTGCCCTGTTTT+TGG - chr8_3:21127363-21127382 Msa1281510:intron 35.0%
GTGTTTGAGAGAGTAAGAAA+AGG + chr8_3:21127543-21127562 None:intergenic 35.0%
AATGACATGAGCAACAAAAC+CGG + chr8_3:21127768-21127787 None:intergenic 35.0%
AATCCATATCCTCTAGTGAA+GGG - chr8_3:21127799-21127818 Msa1281510:intron 35.0%
ACATTCTACAATTGTCCTTC+TGG - chr8_3:21127937-21127956 Msa1281510:CDS 35.0%
CAACTAACAAGAACTTTGCA+TGG + chr8_3:21128077-21128096 None:intergenic 35.0%
CAAAGTTCTTGTTAGTTGCA+TGG - chr8_3:21128079-21128098 Msa1281510:intron 35.0%
TAATTTCTGTAGTCCATCTC+TGG - chr8_3:21128202-21128221 Msa1281510:intron 35.0%
GTAATTTAAGAAGCCAGAGA+TGG + chr8_3:21128218-21128237 None:intergenic 35.0%
AATACGATGATGTATGTTCG+TGG - chr8_3:21128256-21128275 Msa1281510:intron 35.0%
TCCTGAATGTCAAAGCATAT+TGG + chr8_3:21128513-21128532 None:intergenic 35.0%
! TGTCTCCTTTCAAGTCATTA+AGG - chr8_3:21128633-21128652 Msa1281510:intron 35.0%
! GTCTCCTTTCAAGTCATTAA+GGG - chr8_3:21128634-21128653 Msa1281510:intron 35.0%
AGAAAGAAGACAACAAAAGC+TGG - chr8_3:21128790-21128809 Msa1281510:intron 35.0%
! GTTTTTGTTGCAGGATAGAT+CGG - chr8_3:21129049-21129068 Msa1281510:intron 35.0%
CAAAATTCACCATAGCGATT+TGG + chr8_3:21129342-21129361 None:intergenic 35.0%
GTTTCACATCATAATAGGCA+AGG + chr8_3:21129418-21129437 None:intergenic 35.0%
! TCAGCTTTTAAGCATGATCA+TGG - chr8_3:21129502-21129521 Msa1281510:intron 35.0%
AGTTCATAGCAGCAAATGTT+AGG + chr8_3:21129610-21129629 None:intergenic 35.0%
TAACATAGACGAGTTTCTTG+AGG - chr8_3:21129721-21129740 Msa1281510:intron 35.0%
AACATAGACGAGTTTCTTGA+GGG - chr8_3:21129722-21129741 Msa1281510:intron 35.0%
GTATTTCTTGAGACAAAAGC+TGG - chr8_3:21129789-21129808 Msa1281510:CDS 35.0%
AAAAAAGATTAGGCAGTGCT+GGG - chr8_3:21129821-21129840 Msa1281510:intron 35.0%
AACTTTGTCTTGAGCATTCA+TGG + chr8_3:21129897-21129916 None:intergenic 35.0%
TGCTTAATATACTAGGCAGA+AGG - chr8_3:21129960-21129979 Msa1281510:exon 35.0%
TCAACTAGCACTTAAACGAG+TGG + chr8_3:21122750-21122769 None:intergenic 40.0%
!! TTTTGGGTAGAATCGAAGAG+AGG - chr8_3:21122841-21122860 Msa1281510:three_prime_UTR 40.0%
!! CGATCAGATTTTGGGAACAA+AGG + chr8_3:21122925-21122944 None:intergenic 40.0%
! AGGAGCTACGATCAGATTTT+GGG + chr8_3:21122933-21122952 None:intergenic 40.0%
! AAGGAGCTACGATCAGATTT+TGG + chr8_3:21122934-21122953 None:intergenic 40.0%
GATGTCATGGTGAATGAAGA+AGG + chr8_3:21122953-21122972 None:intergenic 40.0%
TTCATTCACCATGACATCGT+TGG - chr8_3:21122955-21122974 Msa1281510:three_prime_UTR 40.0%
TCATTCACCATGACATCGTT+GGG - chr8_3:21122956-21122975 Msa1281510:three_prime_UTR 40.0%
GAGGAGGGAATGAAAAGAAA+CGG + chr8_3:21123031-21123050 None:intergenic 40.0%
GATCGTATGCATTAAGACCT+CGG + chr8_3:21123124-21123143 None:intergenic 40.0%
TCCATTAAGGAAAAGGAAGG+AGG - chr8_3:21123907-21123926 Msa1281510:intron 40.0%
CAAGGGGTTGTTTGAATTTC+CGG + chr8_3:21123943-21123962 None:intergenic 40.0%
TGTGACTGGGATGCTTAAAT+TGG - chr8_3:21124060-21124079 Msa1281510:intron 40.0%
CACAGTAAGCTGAAATGTCA+TGG + chr8_3:21124357-21124376 None:intergenic 40.0%
! GTGCCTACAGTTAGTTTCTA+TGG - chr8_3:21124436-21124455 Msa1281510:intron 40.0%
! ACACTCTAAGAGAGGGATAT+AGG - chr8_3:21124509-21124528 Msa1281510:intron 40.0%
GTAAATTGTCTACCCTACTC+AGG - chr8_3:21124777-21124796 Msa1281510:intron 40.0%
ATTCATACAGAAGCTCCGAA+AGG + chr8_3:21124805-21124824 None:intergenic 40.0%
TGCAAGATTTATACGGTCAG+AGG - chr8_3:21124931-21124950 Msa1281510:intron 40.0%
TGCTTTCCATTCACTGAACT+TGG - chr8_3:21125488-21125507 Msa1281510:intron 40.0%
CAGCAAGACAGTATCTTGAA+AGG + chr8_3:21125671-21125690 None:intergenic 40.0%
GGGGAAATTGACAAATCACA+AGG + chr8_3:21126342-21126361 None:intergenic 40.0%
TCTAGTTAAACGTGGAATGG+AGG + chr8_3:21126555-21126574 None:intergenic 40.0%
TGTAAACCATGGGATTCATG+CGG + chr8_3:21126756-21126775 None:intergenic 40.0%
CTATGCAGTTAGAATAGGAC+AGG + chr8_3:21126966-21126985 None:intergenic 40.0%
!! AGATGGATTAGCAAGCTATG+AGG - chr8_3:21127112-21127131 Msa1281510:intron 40.0%
GATTAGCAAGCTATGAGGTA+AGG - chr8_3:21127117-21127136 Msa1281510:intron 40.0%
TAGTTTGGTAGAGAGGAAGA+TGG - chr8_3:21127175-21127194 Msa1281510:intron 40.0%
GATAACCCAATCAAAAGGGA+AGG - chr8_3:21127204-21127223 Msa1281510:intron 40.0%
!! CTTCACCTTCCCTTTTGATT+GGG + chr8_3:21127212-21127231 None:intergenic 40.0%
! TCTTCACCTTCCCTTTTGAT+TGG + chr8_3:21127213-21127232 None:intergenic 40.0%
ACTAAATAGGGACAGCTACA+TGG + chr8_3:21127330-21127349 None:intergenic 40.0%
ATGTAGCTGTCCCTATTTAG+TGG - chr8_3:21127329-21127348 Msa1281510:intron 40.0%
TGTAGCTGTCCCTATTTAGT+GGG - chr8_3:21127330-21127349 Msa1281510:intron 40.0%
! TGTCCCTATTTAGTGGGTAA+GGG - chr8_3:21127336-21127355 Msa1281510:intron 40.0%
ATGCCCTTACCCACTAAATA+GGG + chr8_3:21127342-21127361 None:intergenic 40.0%
GAGTTAGTATGACACATTGC+CGG - chr8_3:21127746-21127765 Msa1281510:intron 40.0%
GAATCCATATCCTCTAGTGA+AGG - chr8_3:21127798-21127817 Msa1281510:intron 40.0%
GATATTAGTCCCTTCACTAG+AGG + chr8_3:21127811-21127830 None:intergenic 40.0%
GGGACATCAATTATATCACC+TGG - chr8_3:21128100-21128119 Msa1281510:intron 40.0%
AACCGTCCATCAGTATATAC+TGG - chr8_3:21128124-21128143 Msa1281510:intron 40.0%
CAAAGGCCAGTATATACTGA+TGG + chr8_3:21128133-21128152 None:intergenic 40.0%
!! CATCAGTATATACTGGCCTT+TGG - chr8_3:21128131-21128150 Msa1281510:intron 40.0%
GCCAATATGCTTTGACATTC+AGG - chr8_3:21128509-21128528 Msa1281510:intron 40.0%
CAGGGAAACTTAACTACAAG+AGG - chr8_3:21128747-21128766 Msa1281510:intron 40.0%
AAAAGCTGGACAGAAGAAAG+AGG - chr8_3:21128804-21128823 Msa1281510:intron 40.0%
GAGGTGAGAAATGAGAACAT+TGG - chr8_3:21128823-21128842 Msa1281510:intron 40.0%
TGGAAAATAAGAAGGGGTTG+GGG + chr8_3:21128852-21128871 None:intergenic 40.0%
GTGGAAAATAAGAAGGGGTT+GGG + chr8_3:21128853-21128872 None:intergenic 40.0%
AGTGGAAAATAAGAAGGGGT+TGG + chr8_3:21128854-21128873 None:intergenic 40.0%
! AGTGATGATGATCTAGACGA+GGG - chr8_3:21128928-21128947 Msa1281510:intron 40.0%
! AATGGTTTGCCAAATCGCTA+TGG - chr8_3:21129330-21129349 Msa1281510:intron 40.0%
TGTCTAATGGGAAGCTGATT+TGG - chr8_3:21129378-21129397 Msa1281510:intron 40.0%
!! AATGGGAAGCTGATTTGGTT+AGG - chr8_3:21129383-21129402 Msa1281510:intron 40.0%
GCTTAAATCTGACCCATTGT+TGG + chr8_3:21129477-21129496 None:intergenic 40.0%
CAATGGGTCAGATTTAAGCA+AGG - chr8_3:21129478-21129497 Msa1281510:intron 40.0%
! GCTTTTAAGCATGATCATGG+AGG - chr8_3:21129505-21129524 Msa1281510:intron 40.0%
!! ATTTTCAGGAAAGAGGGCTT+TGG - chr8_3:21129649-21129668 Msa1281510:intron 40.0%
ACATAGACGAGTTTCTTGAG+GGG - chr8_3:21129723-21129742 Msa1281510:intron 40.0%
GAAAAAAGATTAGGCAGTGC+TGG - chr8_3:21129820-21129839 Msa1281510:intron 40.0%
TTTAGTGTGCACAAGTTCGA+AGG + chr8_3:21129938-21129957 None:intergenic 40.0%
GAAGAATCTGCTACATGTTC+TGG - chr8_3:21130068-21130087 Msa1281510:five_prime_UTR 40.0%
AGGATGACAGAAAATGTGTC+TGG - chr8_3:21130154-21130173 Msa1281510:five_prime_UTR 40.0%
CTCTTCTCTGTCGAATATCG+CGG + chr8_3:21122993-21123012 None:intergenic 45.0%
! GCCTCCTTCCTTTTCCTTAA+TGG + chr8_3:21123911-21123930 None:intergenic 45.0%
GTGATCTGTCAGAAGTCTGA+TGG - chr8_3:21124122-21124141 Msa1281510:CDS 45.0%
TGTGGACAACCAAATCCTGA+AGG + chr8_3:21124188-21124207 None:intergenic 45.0%
TACCCTACTCAGGATCCTTT+CGG - chr8_3:21124787-21124806 Msa1281510:intron 45.0%
ACGGTCAGAGGAAGATGATA+TGG - chr8_3:21124943-21124962 Msa1281510:intron 45.0%
GTACGACCAAGTTCAGTGAA+TGG + chr8_3:21125497-21125516 None:intergenic 45.0%
TCTCAGATGGAGAACAGAGA+AGG - chr8_3:21126457-21126476 Msa1281510:CDS 45.0%
ACAGAGAAGGAAGTCATGTC+TGG - chr8_3:21126470-21126489 Msa1281510:intron 45.0%
AAGGAAGTCATGTCTGGCAA+GGG - chr8_3:21126476-21126495 Msa1281510:intron 45.0%
! CTGTCCCTATTTAGTGGGTA+AGG - chr8_3:21127335-21127354 Msa1281510:intron 45.0%
GATGCCCTTACCCACTAAAT+AGG + chr8_3:21127343-21127362 None:intergenic 45.0%
!! TTAGCTCTACTTGAGGGCTA+AGG - chr8_3:21127593-21127612 Msa1281510:intron 45.0%
AGTCCCTTCACTAGAGGATA+TGG + chr8_3:21127805-21127824 None:intergenic 45.0%
! TATACTGATGGACGGTTTCC+AGG + chr8_3:21128121-21128140 None:intergenic 45.0%
GGCCAGTATATACTGATGGA+CGG + chr8_3:21128129-21128148 None:intergenic 45.0%
CTACAAGAGGCAGAAAGAGA+AGG - chr8_3:21128760-21128779 Msa1281510:intron 45.0%
GGAAAATAAGAAGGGGTTGG+GGG + chr8_3:21128851-21128870 None:intergenic 45.0%
! GAGTGATGATGATCTAGACG+AGG - chr8_3:21128927-21128946 Msa1281510:intron 45.0%
GCCTTCTCTCTTCACTTTCT+CGG + chr8_3:21128954-21128973 None:intergenic 45.0%
AGTGAAGAGAGAAGGCGAAA+AGG - chr8_3:21128958-21128977 Msa1281510:intron 45.0%
GAGACAAAAGCTGGGAAACA+TGG - chr8_3:21129798-21129817 Msa1281510:CDS 45.0%
!!! AAAAAATATTTTATCTAAAA+TGG - chr8_3:21125517-21125536 Msa1281510:intron 5.0%
CGAAGAGAGGATTGCGAAAC+TGG - chr8_3:21122854-21122873 Msa1281510:three_prime_UTR 50.0%
CAGAGATCCCAACGATGTCA+TGG + chr8_3:21122966-21122985 None:intergenic 50.0%
CAGTATCAGGCTCATATCCG+AGG - chr8_3:21123104-21123123 Msa1281510:three_prime_UTR 50.0%
CTCCGAAAGGATCCTGAGTA+GGG + chr8_3:21124792-21124811 None:intergenic 50.0%
TGGATCCATCATGGGAGCAA+AGG - chr8_3:21124963-21124982 Msa1281510:intron 50.0%
GACATGTCGCAGTACAAGAG+TGG - chr8_3:21125690-21125709 Msa1281510:intron 50.0%
GTCGCAGTACAAGAGTGGTA+AGG - chr8_3:21125695-21125714 Msa1281510:intron 50.0%
GAAGGAAGTCATGTCTGGCA+AGG - chr8_3:21126475-21126494 Msa1281510:intron 50.0%
! GTCATGTCTGGCAAGGGTAT+TGG - chr8_3:21126482-21126501 Msa1281510:intron 50.0%
ATCCTTCCGCATGAATCCCA+TGG - chr8_3:21126747-21126766 Msa1281510:intron 50.0%
AACCATGGGATTCATGCGGA+AGG + chr8_3:21126752-21126771 None:intergenic 50.0%
GCCGAGAAAGTGAAGAGAGA+AGG - chr8_3:21128950-21128969 Msa1281510:intron 50.0%
TGGGAGCAAGTGGATAATGC+AGG - chr8_3:21129840-21129859 Msa1281510:intron 50.0%
CAAGTTCGAAGGACTCGACT+GGG + chr8_3:21129927-21129946 None:intergenic 50.0%
ACAAGTTCGAAGGACTCGAC+TGG + chr8_3:21129928-21129947 None:intergenic 50.0%
GGAAGGAGGCTACAGTCATC+CGG - chr8_3:21123921-21123940 Msa1281510:intron 55.0%
GCTCCGAAAGGATCCTGAGT+AGG + chr8_3:21124793-21124812 None:intergenic 55.0%
TCCATCATGGGAGCAAAGGC+TGG - chr8_3:21124967-21124986 Msa1281510:intron 55.0%
ACCAGCCTTTGCTCCCATGA+TGG + chr8_3:21124971-21124990 None:intergenic 55.0%
!! GCAGGGAAGCATCATCCAGA+AGG + chr8_3:21127955-21127974 None:intergenic 55.0%
! TAGGCAGTGCTGGGAGCAAG+TGG - chr8_3:21129830-21129849 Msa1281510:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 21122743 21130190 21122743 ID=Msa1281510;Name=Msa1281510
chr8_3 mRNA 21122743 21130190 21122743 ID=Msa1281510-mRNA-1;Parent=Msa1281510;Name=Msa1281510-mRNA-1;_AED=0.09;_eAED=0.09;_QI=222|0.9|0.90|1|0.9|0.81|11|433|253
chr8_3 exon 21122743 21123276 21122743 ID=Msa1281510-mRNA-1:exon:7716;Parent=Msa1281510-mRNA-1
chr8_3 exon 21123954 21124018 21123954 ID=Msa1281510-mRNA-1:exon:7715;Parent=Msa1281510-mRNA-1
chr8_3 exon 21124108 21124191 21124108 ID=Msa1281510-mRNA-1:exon:7714;Parent=Msa1281510-mRNA-1
chr8_3 exon 21125190 21125257 21125190 ID=Msa1281510-mRNA-1:exon:7713;Parent=Msa1281510-mRNA-1
chr8_3 exon 21125800 21125858 21125800 ID=Msa1281510-mRNA-1:exon:7712;Parent=Msa1281510-mRNA-1
chr8_3 exon 21126430 21126481 21126430 ID=Msa1281510-mRNA-1:exon:7711;Parent=Msa1281510-mRNA-1
chr8_3 exon 21127217 21127256 21127217 ID=Msa1281510-mRNA-1:exon:7710;Parent=Msa1281510-mRNA-1
chr8_3 exon 21127913 21127996 21127913 ID=Msa1281510-mRNA-1:exon:7709;Parent=Msa1281510-mRNA-1
chr8_3 exon 21128403 21128487 21128403 ID=Msa1281510-mRNA-1:exon:7708;Parent=Msa1281510-mRNA-1
chr8_3 exon 21129763 21129830 21129763 ID=Msa1281510-mRNA-1:exon:7707;Parent=Msa1281510-mRNA-1
chr8_3 exon 21129913 21130190 21129913 ID=Msa1281510-mRNA-1:exon:7706;Parent=Msa1281510-mRNA-1
chr8_3 five_prime_UTR 21129969 21130190 21129969 ID=Msa1281510-mRNA-1:five_prime_utr;Parent=Msa1281510-mRNA-1
chr8_3 CDS 21129913 21129968 21129913 ID=Msa1281510-mRNA-1:cds;Parent=Msa1281510-mRNA-1
chr8_3 CDS 21129763 21129830 21129763 ID=Msa1281510-mRNA-1:cds;Parent=Msa1281510-mRNA-1
chr8_3 CDS 21128403 21128487 21128403 ID=Msa1281510-mRNA-1:cds;Parent=Msa1281510-mRNA-1
chr8_3 CDS 21127913 21127996 21127913 ID=Msa1281510-mRNA-1:cds;Parent=Msa1281510-mRNA-1
chr8_3 CDS 21127217 21127256 21127217 ID=Msa1281510-mRNA-1:cds;Parent=Msa1281510-mRNA-1
chr8_3 CDS 21126430 21126481 21126430 ID=Msa1281510-mRNA-1:cds;Parent=Msa1281510-mRNA-1
chr8_3 CDS 21125800 21125858 21125800 ID=Msa1281510-mRNA-1:cds;Parent=Msa1281510-mRNA-1
chr8_3 CDS 21125190 21125257 21125190 ID=Msa1281510-mRNA-1:cds;Parent=Msa1281510-mRNA-1
chr8_3 CDS 21124108 21124191 21124108 ID=Msa1281510-mRNA-1:cds;Parent=Msa1281510-mRNA-1
chr8_3 CDS 21123954 21124018 21123954 ID=Msa1281510-mRNA-1:cds;Parent=Msa1281510-mRNA-1
chr8_3 CDS 21123176 21123276 21123176 ID=Msa1281510-mRNA-1:cds;Parent=Msa1281510-mRNA-1
chr8_3 three_prime_UTR 21122743 21123175 21122743 ID=Msa1281510-mRNA-1:three_prime_utr;Parent=Msa1281510-mRNA-1
Gene Sequence

>Msa1281510

ATGACATCGTTGGGATCTCTGAAATCCGCGATATTCGACAGAGAAGAGAGAAAACAACAGTATCAGGCTCATATCCGAGGTCTTAATGCATACGATCGCCACAAAAAGTTTATCAACGATTACGTTAGTTTCTATGGGAAAGAAGAAAAGCCTTCAACCTTAAAGTTGCCTATTAAAACAGATAAAGACACTCTAAGAGAGGGATATAGATTTATACGGTCAGAGGAAGATGATATGGATCCATCATGGGAGCAAAGGCTGGTGAAGCGTTATTATGCTAAGCTTTTTAAGGAATACTGTCTTGCTGACATGTCGCAGTACAAGAGTGGTAAGATTGGTCTCAGATGGAGAACAGAGAAGGAAGTCATGTCTGGCAAGGGTATTGGCCAATTTTTATGCGGTAACAAGCATTGCAATGAGAAAGATGGATTAGCAAGCTATGAGGTGAACTTTTGTTACTTTGAAGCTGGAGAGAACAAACAAGCTCTAGTTAAATTGGTAGCATGTGAGAGATGTGCAGGGAAACTTAACTACAAGAGGCAGAAAGAGAAGGAGCAATTAGAAAGAAGACAACAAAAGCTGGACAGAAGAAAGAGGAGTCGTTCGAAGAGTGATGATGATCTAGACGAGGGCCGAGAAAGTGAAGAGAGAAGGCGAAAAGGAAAGAGGGCTTTGGTTTCAGCCAGTGATCATAAAATTGATGATGATAATGATTCTGATGATGATAACATAGACGAGTTTCTTGAGGGGATGTTTCCCTGA

Protein sequence

>Msa1281510

MTSLGSLKSAIFDREERKQQYQAHIRGLNAYDRHKKFINDYVSFYGKEEKPSTLKLPIKTDKDTLREGYRFIRSEEDDMDPSWEQRLVKRYYAKLFKEYCLADMSQYKSGKIGLRWRTEKEVMSGKGIGQFLCGNKHCNEKDGLASYEVNFCYFEAGENKQALVKLVACERCAGKLNYKRQKEKEQLERRQQKLDRRKRSRSKSDDDLDEGRESEERRRKGKRALVSASDHKIDDDNDSDDDNIDEFLEGMFP*