Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0484150 | KEH22453.1 | 87.509 | 1353 | 108 | 6 | 1 | 1342 | 1 | 1303 | 0.0 | 2232 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0484150 | sp|F4I8S3|CLSY3_ARATH | 45.644 | 815 | 384 | 21 | 565 | 1340 | 611 | 1405 | 0.0 | 650 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0484150 | A0A072U020 | 87.509 | 1353 | 108 | 6 | 1 | 1342 | 1 | 1303 | 0.0 | 2232 |
Gene ID | Type | Classification |
---|---|---|
Msa0484150 | TR | SNF2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000560 | Msa0484150 | 0.800233 | 1.586794e-48 | -8.615850e-47 |
Msa0168480 | Msa0484150 | 0.832055 | 1.175541e-55 | -8.615850e-47 |
Msa0307280 | Msa0484150 | 0.806340 | 8.626108e-50 | -8.615850e-47 |
Msa0358310 | Msa0484150 | 0.804268 | 2.343191e-49 | -8.615850e-47 |
Msa0484150 | Msa0981320 | 0.803467 | 3.437434e-49 | -8.615850e-47 |
Msa0484150 | Msa1024180 | 0.822837 | 1.912564e-53 | -8.615850e-47 |
Msa0484150 | Msa1037640 | 0.821925 | 3.116031e-53 | -8.615850e-47 |
Msa0484150 | Msa1072960 | 0.814729 | 1.328103e-51 | -8.615850e-47 |
Msa0484150 | Msa1103270 | 0.879964 | 8.102375e-70 | -8.615850e-47 |
Msa0484150 | Msa1152120 | 0.809126 | 2.207809e-50 | -8.615850e-47 |
Msa0484150 | Msa1160910 | 0.822549 | 2.232316e-53 | -8.615850e-47 |
Msa0484150 | Msa1172350 | 0.805213 | 1.487802e-49 | -8.615850e-47 |
Msa0484150 | Msa1306340 | 0.803460 | 3.449913e-49 | -8.615850e-47 |
Msa0484150 | Msa1363260 | 0.810052 | 1.396253e-50 | -8.615850e-47 |
Msa0484150 | Msa1393780 | 0.804014 | 2.646900e-49 | -8.615850e-47 |
Msa0484150 | Msa1449930 | 0.822676 | 2.085978e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0484150 | MtrunA17_Chr7g0232971 | 87.509 | 1353 | 108 | 6 | 1 | 1342 | 1 | 1303 | 0.0 | 2232 |
Msa0484150 | MtrunA17_Chr7g0233021 | 57.852 | 1369 | 418 | 30 | 1 | 1341 | 1 | 1238 | 0.0 | 1286 |
Msa0484150 | MtrunA17_Chr4g0047081 | 53.107 | 1384 | 444 | 26 | 15 | 1337 | 1 | 1240 | 0.0 | 1160 |
Msa0484150 | MtrunA17_Chr7g0233031 | 61.203 | 1031 | 308 | 19 | 359 | 1336 | 256 | 1247 | 0.0 | 1139 |
Msa0484150 | MtrunA17_Chr7g0225791 | 63.000 | 1000 | 310 | 23 | 363 | 1337 | 326 | 1290 | 0.0 | 1135 |
Msa0484150 | MtrunA17_Chr7g0232991 | 74.474 | 666 | 143 | 7 | 695 | 1341 | 9 | 666 | 0.0 | 957 |
Msa0484150 | MtrunA17_Chr7g0233001 | 67.790 | 534 | 156 | 7 | 811 | 1337 | 1 | 525 | 0.0 | 706 |
Msa0484150 | MtrunA17_Chr1g0191141 | 35.596 | 722 | 382 | 22 | 639 | 1316 | 400 | 1082 | 5.52e-112 | 379 |
Msa0484150 | MtrunA17_Chr7g0224051 | 33.955 | 751 | 435 | 21 | 625 | 1337 | 389 | 1116 | 9.56e-106 | 362 |
Msa0484150 | MtrunA17_Chr2g0320781 | 68.724 | 243 | 74 | 2 | 1045 | 1286 | 1 | 242 | 3.05e-103 | 327 |
Msa0484150 | MtrunA17_Chr3g0114161 | 32.980 | 755 | 413 | 21 | 639 | 1337 | 531 | 1248 | 3.12e-103 | 357 |
Msa0484150 | MtrunA17_Chr5g0437621 | 33.012 | 727 | 418 | 20 | 632 | 1316 | 584 | 1283 | 3.59e-98 | 343 |
Msa0484150 | MtrunA17_Chr8g0352361 | 29.293 | 693 | 374 | 18 | 632 | 1291 | 243 | 852 | 3.29e-78 | 278 |
Msa0484150 | MtrunA17_Chr2g0296421 | 30.108 | 651 | 344 | 18 | 671 | 1291 | 432 | 1001 | 5.21e-77 | 277 |
Msa0484150 | MtrunA17_Chr1g0183681 | 28.058 | 556 | 328 | 21 | 753 | 1291 | 383 | 883 | 7.27e-35 | 145 |
Msa0484150 | MtrunA17_Chr4g0066741 | 27.424 | 361 | 213 | 6 | 945 | 1291 | 313 | 638 | 4.99e-27 | 119 |
Msa0484150 | MtrunA17_Chr2g0286291 | 28.056 | 360 | 212 | 7 | 945 | 1291 | 316 | 641 | 1.72e-26 | 118 |
Msa0484150 | MtrunA17_Chr1g0163011 | 25.439 | 570 | 314 | 21 | 756 | 1273 | 190 | 700 | 2.90e-25 | 113 |
Msa0484150 | MtrunA17_Chr4g0052341 | 24.573 | 586 | 319 | 24 | 760 | 1310 | 744 | 1241 | 3.28e-25 | 114 |
Msa0484150 | MtrunA17_Chr3g0137091 | 27.841 | 352 | 221 | 8 | 945 | 1290 | 435 | 759 | 6.16e-24 | 110 |
Msa0484150 | MtrunA17_Chr1g0205891 | 27.614 | 373 | 210 | 12 | 945 | 1293 | 501 | 837 | 1.03e-23 | 108 |
Msa0484150 | MtrunA17_Chr3g0095091 | 23.894 | 565 | 309 | 20 | 761 | 1297 | 571 | 1042 | 2.21e-23 | 108 |
Msa0484150 | MtrunA17_Chr5g0394201 | 27.807 | 374 | 207 | 13 | 945 | 1293 | 488 | 823 | 3.35e-23 | 107 |
Msa0484150 | MtrunA17_Chr5g0442141 | 23.801 | 563 | 312 | 18 | 761 | 1297 | 617 | 1088 | 3.83e-23 | 107 |
Msa0484150 | MtrunA17_Chr5g0403921 | 26.087 | 414 | 261 | 11 | 945 | 1336 | 312 | 702 | 4.15e-23 | 106 |
Msa0484150 | MtrunA17_Chr1g0190391 | 29.183 | 257 | 146 | 9 | 753 | 1007 | 574 | 796 | 4.56e-23 | 106 |
Msa0484150 | MtrunA17_Chr1g0190381 | 37.714 | 175 | 98 | 3 | 1137 | 1302 | 189 | 361 | 9.21e-22 | 101 |
Msa0484150 | MtrunA17_Chr4g0066651 | 26.558 | 369 | 210 | 11 | 945 | 1286 | 1116 | 1450 | 1.73e-21 | 102 |
Msa0484150 | MtrunA17_Chr7g0232121 | 24.868 | 378 | 217 | 9 | 946 | 1287 | 175 | 521 | 4.92e-20 | 97.1 |
Msa0484150 | MtrunA17_Chr7g0224021 | 42.857 | 105 | 56 | 3 | 742 | 846 | 13 | 113 | 5.79e-20 | 87.0 |
Msa0484150 | MtrunA17_Chr8g0384531 | 35.032 | 157 | 95 | 2 | 1134 | 1290 | 738 | 887 | 2.43e-17 | 88.2 |
Msa0484150 | MtrunA17_Chr4g0040301 | 35.211 | 142 | 85 | 2 | 1153 | 1294 | 397 | 531 | 4.77e-16 | 83.6 |
Msa0484150 | MtrunA17_Chr1g0175191 | 29.064 | 203 | 130 | 5 | 1098 | 1293 | 1017 | 1212 | 7.29e-16 | 84.0 |
Msa0484150 | MtrunA17_Chr5g0393461 | 38.095 | 105 | 65 | 0 | 1186 | 1290 | 583 | 687 | 7.54e-16 | 83.2 |
Msa0484150 | MtrunA17_Chr8g0348721 | 26.415 | 371 | 211 | 16 | 945 | 1282 | 1111 | 1452 | 3.65e-14 | 78.2 |
Msa0484150 | MtrunA17_Chr7g0224031 | 28.497 | 193 | 117 | 4 | 934 | 1106 | 43 | 234 | 6.60e-13 | 70.1 |
Msa0484150 | MtrunA17_Chr1g0168031 | 33.582 | 134 | 82 | 2 | 1153 | 1286 | 1004 | 1130 | 1.50e-12 | 72.8 |
Msa0484150 | MtrunA17_Chr7g0248031 | 24.339 | 378 | 217 | 14 | 945 | 1286 | 1119 | 1463 | 2.14e-12 | 72.4 |
Msa0484150 | MtrunA17_Chr7g0257101 | 27.273 | 176 | 119 | 3 | 1150 | 1325 | 1206 | 1372 | 2.48e-12 | 72.0 |
Msa0484150 | MtrunA17_Chr7g0231521 | 27.404 | 208 | 120 | 4 | 1093 | 1287 | 253 | 442 | 6.97e-12 | 70.5 |
Msa0484150 | MtrunA17_Chr7g0255821 | 37.190 | 121 | 69 | 3 | 1154 | 1273 | 668 | 782 | 9.88e-12 | 69.7 |
Msa0484150 | MtrunA17_Chr2g0320751 | 35.354 | 99 | 63 | 1 | 1188 | 1286 | 896 | 993 | 6.69e-11 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0484150 | AT1G05490.1 | 45.644 | 815 | 384 | 21 | 565 | 1340 | 611 | 1405 | 0.0 | 650 |
Msa0484150 | AT3G24340.1 | 48.006 | 727 | 322 | 16 | 627 | 1340 | 448 | 1131 | 0.0 | 629 |
Msa0484150 | AT3G42670.2 | 33.197 | 732 | 438 | 16 | 632 | 1333 | 541 | 1251 | 1.02e-100 | 350 |
Msa0484150 | AT3G42670.3 | 33.197 | 732 | 438 | 16 | 632 | 1333 | 541 | 1251 | 1.02e-100 | 350 |
Msa0484150 | AT3G42670.1 | 33.197 | 732 | 438 | 16 | 632 | 1333 | 541 | 1251 | 1.02e-100 | 350 |
Msa0484150 | AT3G42670.4 | 32.972 | 737 | 435 | 17 | 632 | 1333 | 541 | 1253 | 1.09e-100 | 350 |
Msa0484150 | AT5G20420.1 | 33.426 | 718 | 421 | 19 | 632 | 1316 | 547 | 1240 | 1.82e-97 | 341 |
Msa0484150 | AT2G21450.2 | 29.942 | 688 | 387 | 22 | 634 | 1291 | 158 | 780 | 4.18e-78 | 276 |
Msa0484150 | AT2G21450.3 | 29.942 | 688 | 387 | 22 | 634 | 1291 | 60 | 682 | 4.35e-78 | 274 |
Msa0484150 | AT2G21450.1 | 29.942 | 688 | 387 | 22 | 634 | 1291 | 151 | 773 | 4.72e-78 | 276 |
Msa0484150 | AT2G16390.2 | 30.171 | 643 | 362 | 17 | 671 | 1291 | 273 | 850 | 5.58e-77 | 275 |
Msa0484150 | AT2G16390.1 | 30.171 | 643 | 362 | 17 | 671 | 1291 | 270 | 847 | 1.22e-76 | 274 |
Msa0484150 | AT3G19210.1 | 25.176 | 568 | 323 | 16 | 761 | 1290 | 180 | 683 | 2.59e-33 | 140 |
Msa0484150 | AT3G19210.3 | 25.176 | 568 | 323 | 16 | 761 | 1290 | 180 | 683 | 2.93e-33 | 139 |
Msa0484150 | AT2G18760.4 | 28.142 | 565 | 314 | 21 | 753 | 1291 | 377 | 875 | 4.69e-33 | 140 |
Msa0484150 | AT2G18760.1 | 28.142 | 565 | 314 | 21 | 753 | 1291 | 377 | 875 | 4.69e-33 | 140 |
Msa0484150 | AT2G18760.2 | 28.142 | 565 | 314 | 21 | 753 | 1291 | 377 | 875 | 4.69e-33 | 140 |
Msa0484150 | AT2G18760.7 | 28.142 | 565 | 314 | 21 | 753 | 1291 | 377 | 875 | 4.69e-33 | 140 |
Msa0484150 | AT2G18760.5 | 28.142 | 565 | 314 | 21 | 753 | 1291 | 377 | 875 | 4.69e-33 | 140 |
Msa0484150 | AT2G18760.6 | 28.142 | 565 | 314 | 21 | 753 | 1291 | 377 | 875 | 4.69e-33 | 140 |
Msa0484150 | AT2G18760.3 | 28.292 | 562 | 317 | 19 | 753 | 1291 | 436 | 934 | 6.49e-33 | 139 |
Msa0484150 | AT3G19210.2 | 24.868 | 567 | 324 | 16 | 761 | 1290 | 180 | 681 | 6.76e-33 | 139 |
Msa0484150 | AT5G63950.1 | 25.477 | 577 | 317 | 20 | 753 | 1286 | 369 | 875 | 4.58e-28 | 123 |
Msa0484150 | AT2G25170.1 | 25.445 | 562 | 318 | 20 | 750 | 1290 | 262 | 743 | 2.27e-27 | 121 |
Msa0484150 | AT2G25170.4 | 25.445 | 562 | 318 | 20 | 750 | 1290 | 262 | 743 | 2.27e-27 | 121 |
Msa0484150 | AT2G25170.2 | 25.445 | 562 | 318 | 20 | 750 | 1290 | 279 | 760 | 3.62e-27 | 120 |
Msa0484150 | AT2G25170.3 | 25.445 | 562 | 318 | 20 | 750 | 1290 | 288 | 769 | 4.30e-27 | 120 |
Msa0484150 | AT5G18620.2 | 27.654 | 358 | 216 | 6 | 945 | 1291 | 319 | 644 | 1.11e-25 | 115 |
Msa0484150 | AT5G18620.1 | 27.654 | 358 | 216 | 6 | 945 | 1291 | 319 | 644 | 1.21e-25 | 115 |
Msa0484150 | AT3G06010.1 | 27.376 | 526 | 267 | 24 | 797 | 1293 | 425 | 864 | 6.27e-25 | 113 |
Msa0484150 | AT3G06400.3 | 27.654 | 358 | 216 | 7 | 945 | 1291 | 314 | 639 | 8.22e-25 | 113 |
Msa0484150 | AT3G06400.2 | 27.654 | 358 | 216 | 7 | 945 | 1291 | 314 | 639 | 8.36e-25 | 113 |
Msa0484150 | AT3G06400.1 | 27.654 | 358 | 216 | 7 | 945 | 1291 | 314 | 639 | 8.64e-25 | 113 |
Msa0484150 | AT5G44800.1 | 25.048 | 519 | 306 | 16 | 797 | 1299 | 711 | 1162 | 1.05e-24 | 113 |
Msa0484150 | AT2G13370.1 | 25.664 | 565 | 299 | 21 | 760 | 1297 | 624 | 1094 | 1.29e-24 | 112 |
Msa0484150 | AT2G13370.2 | 25.664 | 565 | 299 | 21 | 760 | 1297 | 624 | 1094 | 1.29e-24 | 112 |
Msa0484150 | AT2G13370.3 | 25.664 | 565 | 299 | 21 | 760 | 1297 | 624 | 1094 | 1.29e-24 | 112 |
Msa0484150 | AT5G19310.2 | 28.267 | 375 | 205 | 14 | 945 | 1293 | 246 | 582 | 5.70e-24 | 109 |
Msa0484150 | AT5G19310.1 | 28.852 | 357 | 190 | 14 | 945 | 1275 | 510 | 828 | 7.44e-24 | 110 |
Msa0484150 | AT5G63950.2 | 27.937 | 383 | 216 | 13 | 945 | 1286 | 495 | 858 | 1.57e-23 | 108 |
Msa0484150 | AT4G31900.3 | 25.203 | 369 | 222 | 8 | 945 | 1299 | 353 | 681 | 1.42e-22 | 105 |
Msa0484150 | AT4G31900.1 | 25.203 | 369 | 222 | 8 | 945 | 1299 | 353 | 681 | 1.90e-22 | 105 |
Msa0484150 | AT4G31900.2 | 25.203 | 369 | 222 | 8 | 945 | 1299 | 312 | 640 | 2.24e-22 | 105 |
Msa0484150 | AT2G28290.3 | 27.493 | 371 | 204 | 11 | 945 | 1286 | 881 | 1215 | 1.96e-21 | 102 |
Msa0484150 | AT2G28290.4 | 27.493 | 371 | 204 | 11 | 945 | 1286 | 881 | 1215 | 1.96e-21 | 102 |
Msa0484150 | AT2G28290.2 | 27.493 | 371 | 204 | 11 | 945 | 1286 | 881 | 1215 | 1.99e-21 | 102 |
Msa0484150 | AT2G28290.6 | 27.493 | 371 | 204 | 11 | 945 | 1286 | 882 | 1216 | 1.99e-21 | 102 |
Msa0484150 | AT2G28290.1 | 27.493 | 371 | 204 | 11 | 945 | 1286 | 881 | 1215 | 2.11e-21 | 102 |
Msa0484150 | AT2G28290.5 | 27.493 | 371 | 204 | 11 | 945 | 1286 | 882 | 1216 | 2.15e-21 | 102 |
Msa0484150 | AT2G44980.1 | 27.005 | 374 | 200 | 11 | 946 | 1287 | 181 | 513 | 8.73e-21 | 99.8 |
Msa0484150 | AT1G08600.1 | 35.263 | 190 | 115 | 3 | 1120 | 1302 | 1079 | 1267 | 1.02e-20 | 100 |
Msa0484150 | AT1G08600.4 | 35.263 | 190 | 115 | 3 | 1120 | 1302 | 1100 | 1288 | 1.05e-20 | 100 |
Msa0484150 | AT1G08600.3 | 35.263 | 190 | 115 | 3 | 1120 | 1302 | 1100 | 1288 | 1.05e-20 | 100 |
Msa0484150 | AT1G08600.2 | 35.263 | 190 | 115 | 3 | 1120 | 1302 | 1100 | 1288 | 1.05e-20 | 100 |
Msa0484150 | AT2G02090.1 | 24.320 | 588 | 298 | 20 | 756 | 1273 | 208 | 718 | 2.24e-19 | 95.1 |
Msa0484150 | AT2G44980.3 | 26.684 | 386 | 199 | 13 | 946 | 1287 | 186 | 531 | 2.44e-19 | 95.1 |
Msa0484150 | AT2G44980.2 | 26.684 | 386 | 199 | 13 | 946 | 1287 | 187 | 532 | 2.66e-19 | 95.1 |
Msa0484150 | AT5G66750.1 | 33.690 | 187 | 118 | 2 | 1150 | 1336 | 538 | 718 | 2.51e-17 | 88.2 |
Msa0484150 | AT1G03750.1 | 34.507 | 142 | 86 | 2 | 1153 | 1294 | 545 | 679 | 3.50e-16 | 84.7 |
Msa0484150 | AT5G43530.1 | 38.060 | 134 | 76 | 3 | 1153 | 1286 | 1128 | 1254 | 7.55e-15 | 80.9 |
Msa0484150 | AT3G12810.2 | 31.288 | 163 | 105 | 3 | 1129 | 1291 | 1064 | 1219 | 2.03e-14 | 79.3 |
Msa0484150 | AT3G12810.1 | 33.333 | 138 | 85 | 3 | 1154 | 1291 | 1093 | 1223 | 2.08e-14 | 79.3 |
Msa0484150 | AT3G32330.1 | 25.620 | 363 | 180 | 12 | 758 | 1106 | 20 | 306 | 2.16e-14 | 76.6 |
Msa0484150 | AT3G57300.1 | 29.936 | 157 | 101 | 4 | 1144 | 1299 | 1214 | 1362 | 9.61e-13 | 73.9 |
Msa0484150 | AT3G57300.4 | 29.936 | 157 | 101 | 4 | 1144 | 1299 | 1214 | 1362 | 9.61e-13 | 73.9 |
Msa0484150 | AT3G57300.2 | 31.126 | 151 | 95 | 4 | 1150 | 1299 | 1253 | 1395 | 1.21e-12 | 73.6 |
Msa0484150 | AT5G05130.1 | 33.125 | 160 | 96 | 4 | 1154 | 1312 | 727 | 876 | 1.88e-12 | 72.8 |
Msa0484150 | AT1G61140.1 | 29.114 | 158 | 102 | 3 | 1153 | 1310 | 1124 | 1271 | 1.40e-11 | 70.1 |
Msa0484150 | AT1G61140.3 | 29.114 | 158 | 102 | 3 | 1153 | 1310 | 966 | 1113 | 2.40e-11 | 69.3 |
Msa0484150 | AT3G54280.1 | 29.070 | 172 | 108 | 4 | 1152 | 1321 | 1830 | 1989 | 8.88e-11 | 67.4 |
Msa0484150 | AT3G54280.2 | 29.070 | 172 | 108 | 4 | 1152 | 1321 | 1861 | 2020 | 9.09e-11 | 67.4 |
Find 278 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATCTGCAGATTGGAAATTT+AGG | 0.131491 | 3_4:+1398605 | Msa0484150:intron |
TTTAATAACCATTGAGAAAA+AGG | 0.146720 | 3_4:+1397658 | Msa0484150:CDS |
ATAAGACTTCTTTCATTTCT+TGG | 0.172989 | 3_4:-1400028 | None:intergenic |
AACAAATTCAACCAGAAATT+TGG | 0.181326 | 3_4:-1400584 | None:intergenic |
CGCAAGCGGATCATCCTTTC+TGG | 0.190824 | 3_4:+1400079 | Msa0484150:CDS |
GAAATGAAAGAAGTCTTATT+TGG | 0.194450 | 3_4:+1400032 | Msa0484150:CDS |
TTAGAATGACCAAAACTTAA+AGG | 0.199787 | 3_4:-1397815 | None:intergenic |
AACTCCTTGCAGAATGCTTT+TGG | 0.222071 | 3_4:+1398158 | Msa0484150:CDS |
CGAGATTTGGTTGAGAGTTT+TGG | 0.223596 | 3_4:+1401171 | Msa0484150:CDS |
GGGATTATAAAGGCAGATTT+AGG | 0.226338 | 3_4:+1398053 | Msa0484150:CDS |
TCCTTTCCAGAACAATTTCT+TGG | 0.227952 | 3_4:+1400105 | Msa0484150:CDS |
CAAACAATTAAAATTGCTTA+TGG | 0.237100 | 3_4:+1400285 | Msa0484150:CDS |
ATCATTGAAGCCATGGATTA+AGG | 0.243799 | 3_4:-1400767 | None:intergenic |
GGGAGGATTTGAGTAAGATT+TGG | 0.259538 | 3_4:+1397348 | Msa0484150:CDS |
TGAAGGAGGAGGAGGACAAT+GGG | 0.272818 | 3_4:+1397327 | Msa0484150:CDS |
ACAATAACTGGCAAGCATTT+AGG | 0.272862 | 3_4:-1399635 | None:intergenic |
CTTTCACATCATCAGGAATT+AGG | 0.276376 | 3_4:-1399424 | None:intergenic |
TATGATGATGGAGATGAAAA+AGG | 0.277049 | 3_4:+1396675 | Msa0484150:CDS |
GCTGATCAACCTTTAAGTTT+TGG | 0.281460 | 3_4:+1397806 | Msa0484150:CDS |
GGGAGGATTTGAGTAAGATT+TGG | 0.287447 | 3_4:+1397486 | Msa0484150:CDS |
AGGTGTGAAAACCAAATTTC+TGG | 0.289537 | 3_4:+1400573 | Msa0484150:CDS |
AAAGTTGAAAGTGATGAAAT+TGG | 0.294187 | 3_4:+1396738 | Msa0484150:CDS |
AGCATAAGGGACGGATTAAT+TGG | 0.294473 | 3_4:-1400648 | None:intergenic |
ATAAACTTTAGCATCATCTT+TGG | 0.296225 | 3_4:-1397882 | None:intergenic |
AAGAAGGCTTTGAGTTCATT+TGG | 0.296646 | 3_4:+1399468 | Msa0484150:CDS |
CCGCGAGTTTGTTACTTACT+TGG | 0.296765 | 3_4:+1399663 | Msa0484150:CDS |
ATCTCCCATGCTCCCGGAAC+CGG | 0.297873 | 3_4:+1399563 | Msa0484150:CDS |
TTAAAGACGTGTGCAATAAT+TGG | 0.299332 | 3_4:-1400681 | None:intergenic |
CAACCTTGTCTTCCCGGTTC+CGG | 0.300576 | 3_4:-1399576 | None:intergenic |
GATGATGATGAAGATGAAAA+AGG | 0.302287 | 3_4:+1396834 | Msa0484150:CDS |
ATTTCTTCGGTTCTCCATTC+CGG | 0.303426 | 3_4:-1397718 | None:intergenic |
CAGAAACATGTCAAAGGTTT+AGG | 0.309951 | 3_4:+1397947 | Msa0484150:CDS |
AACCTTGTCTTCCCGGTTCC+GGG | 0.315382 | 3_4:-1399575 | None:intergenic |
ATTCAGCTTCTGATTCTCTA+AGG | 0.315894 | 3_4:-1398384 | None:intergenic |
TATAGTCAACCTTGTCTTCC+CGG | 0.316147 | 3_4:-1399582 | None:intergenic |
TTTGGTTCTATTCCACTTGT+TGG | 0.318321 | 3_4:+1396534 | Msa0484150:CDS |
GAAATAACCTCACCATTCTT+AGG | 0.318856 | 3_4:-1396804 | None:intergenic |
ATCTGCAGATTGGAAATTTA+GGG | 0.322421 | 3_4:+1398606 | Msa0484150:intron |
GGAGGATTTGAGTAAGATTT+GGG | 0.323670 | 3_4:+1397487 | Msa0484150:CDS |
GTAAATGTTTCACACTTTGA+TGG | 0.324100 | 3_4:+1399332 | Msa0484150:CDS |
TATTGCACACGTCTTTAAAC+TGG | 0.328188 | 3_4:+1400686 | Msa0484150:CDS |
CTCATAATGACGGCACTGTT+TGG | 0.328825 | 3_4:+1399399 | Msa0484150:CDS |
AGCAAGAATGTTCCATTGTT+TGG | 0.330911 | 3_4:+1396516 | Msa0484150:CDS |
AGATTTCCCTCTGAAGGTTC+TGG | 0.333403 | 3_4:+1399284 | Msa0484150:CDS |
TTTCTTCGGTTCTCCATTCC+GGG | 0.333481 | 3_4:-1397717 | None:intergenic |
AGTGATGATGAAAGTTCTTC+TGG | 0.335013 | 3_4:+1397113 | Msa0484150:CDS |
GACCAAGGAGGAGGAGGAAC+AGG | 0.336253 | 3_4:+1398333 | Msa0484150:CDS |
GGAGGATTTGAGTAAGATTT+GGG | 0.337243 | 3_4:+1397349 | Msa0484150:CDS |
TGTTGTTCCTGAAAATGTTC+AGG | 0.352581 | 3_4:+1396638 | Msa0484150:CDS |
ATATAGGATTGGCCAGAAAA+AGG | 0.356459 | 3_4:+1400927 | Msa0484150:CDS |
CTCGCGGGAGCAACAATAAC+TGG | 0.361163 | 3_4:-1399647 | None:intergenic |
AAAACGGAGAAAGAGTGTTT+TGG | 0.361875 | 3_4:+1396563 | Msa0484150:CDS |
AGAATGTTCCAATGGGTTAC+TGG | 0.370211 | 3_4:+1397511 | Msa0484150:CDS |
GGAGGAGGAGGAGGTCAAAG+GGG | 0.372784 | 3_4:+1397466 | Msa0484150:CDS |
AGCATCATCATGCTCTTTAC+CGG | 0.375420 | 3_4:-1399750 | None:intergenic |
TTGGTCTATGATTAAGCATA+AGG | 0.376847 | 3_4:-1400662 | None:intergenic |
TGATGGTGAGGAGGAGGAGG+AGG | 0.376887 | 3_4:+1397439 | Msa0484150:CDS |
GAAAATAAAACATCGCAAAC+AGG | 0.379025 | 3_4:+1400990 | Msa0484150:CDS |
GGAGGAGGAGGAAGAGGATG+AGG | 0.388916 | 3_4:+1397184 | Msa0484150:CDS |
CTCTTTGATTCGCATTTCTT+CGG | 0.390762 | 3_4:-1397731 | None:intergenic |
TCAGTCGAAGGAGCGAGATT+TGG | 0.391626 | 3_4:+1401158 | Msa0484150:CDS |
TTGTACTACTTGATGTCGTT+TGG | 0.391683 | 3_4:+1400869 | Msa0484150:CDS |
GAAGGAGGAGGAGGACAATG+GGG | 0.391820 | 3_4:+1397328 | Msa0484150:CDS |
AGCTCATGCGGTATCGTGTT+AGG | 0.392169 | 3_4:-1400166 | None:intergenic |
ATTCCTTCTTCTCACCATTA+CGG | 0.392583 | 3_4:-1398078 | None:intergenic |
AAGGATTCTTTCACATCATC+AGG | 0.393064 | 3_4:-1399431 | None:intergenic |
TGGTGAGAAGAAGGAATCTA+TGG | 0.395463 | 3_4:+1398084 | Msa0484150:CDS |
ACAGATATGGAGCCTTAAAA+AGG | 0.397605 | 3_4:+1398294 | Msa0484150:CDS |
TCATAATGACGGCACTGTTT+GGG | 0.398311 | 3_4:+1399400 | Msa0484150:CDS |
ACGTCTTTAAACTGGACAAT+GGG | 0.398431 | 3_4:+1400694 | Msa0484150:CDS |
GTGGAGAAGAGGAAAGAAAA+TGG | 0.399181 | 3_4:+1399944 | Msa0484150:CDS |
ACAGTTCCAAGAAATTGTTC+TGG | 0.407712 | 3_4:-1400111 | None:intergenic |
GGAACCATTGTGGGATCAAA+TGG | 0.410176 | 3_4:+1398354 | Msa0484150:CDS |
ATTTCCATTGATTATGATGA+TGG | 0.414013 | 3_4:+1396663 | Msa0484150:CDS |
GTACAAAGAAAAGAGCATTC+TGG | 0.418938 | 3_4:+1399844 | Msa0484150:CDS |
TTCCTGTTCCTCCTCCTCCT+TGG | 0.418942 | 3_4:-1398335 | None:intergenic |
AGAAAGGATGATCCGCTTGC+GGG | 0.420951 | 3_4:-1400077 | None:intergenic |
TACAAAGAAAAGAGCATTCT+GGG | 0.421102 | 3_4:+1399845 | Msa0484150:CDS |
TCTTCCCGGTTCCGGGAGCA+TGG | 0.424839 | 3_4:-1399568 | None:intergenic |
GGAGGAGGTGAAGGAGGAGG+AGG | 0.425208 | 3_4:+1397319 | Msa0484150:CDS |
CTTTCAAAAGATCACATTCG+AGG | 0.427343 | 3_4:-1400492 | None:intergenic |
TTAGCTAAACGCAGCTCCTT+CGG | 0.427711 | 3_4:-1398136 | None:intergenic |
AAAGCACAGGTTATCTGAAC+TGG | 0.430724 | 3_4:+1401017 | Msa0484150:CDS |
TTGAGACACCTCCACAGATA+TGG | 0.430864 | 3_4:+1398281 | Msa0484150:CDS |
GGAAGATGAGTTTAAGAAAT+GGG | 0.431367 | 3_4:+1399685 | Msa0484150:CDS |
TTGAACAATCTCAAATTATC+CGG | 0.431439 | 3_4:+1399731 | Msa0484150:CDS |
TGATGATGAGGAGGAGGAGG+AGG | 0.434071 | 3_4:+1397166 | Msa0484150:CDS |
ATCATCATCATCAACATAAG+AGG | 0.440514 | 3_4:-1397288 | None:intergenic |
GGGAAGATGAGTTTAAGAAA+TGG | 0.441850 | 3_4:+1399684 | Msa0484150:CDS |
GCCACCCTCCCTGCGCGGAC+CGG | 0.442944 | 3_4:-1399534 | None:intergenic |
GTGAAGGAGGAGGAGGACAA+TGG | 0.444476 | 3_4:+1397326 | Msa0484150:CDS |
CGCGAGTTTGTTACTTACTT+GGG | 0.448148 | 3_4:+1399664 | Msa0484150:CDS |
AGATTGTTCAAATTGTGAAA+TGG | 0.450404 | 3_4:-1399719 | None:intergenic |
TGGTGAGGAGGAGGTGAAGG+AGG | 0.451321 | 3_4:+1397313 | Msa0484150:CDS |
CACTTGTTGGTTCATCAAAA+CGG | 0.453633 | 3_4:+1396547 | Msa0484150:CDS |
GTCTAATAAGCGGCTGAGTA+AGG | 0.454386 | 3_4:+1399790 | Msa0484150:CDS |
CGCCTCTCTCGCTAACCCAT+TGG | 0.456685 | 3_4:-1397381 | None:intergenic |
TGAGGAGGAGGTGAAGGAGG+AGG | 0.458736 | 3_4:+1397316 | Msa0484150:CDS |
ATCTCCATCATCATAATCAA+TGG | 0.458949 | 3_4:-1396667 | None:intergenic |
AAAGTTAACAGCGCAACTCT+TGG | 0.459672 | 3_4:-1401073 | None:intergenic |
TGGGAAGCCGATATTTCAAC+AGG | 0.460180 | 3_4:+1400241 | Msa0484150:CDS |
GGAGGAGGAGGTCAAAGGGG+AGG | 0.460444 | 3_4:+1397469 | Msa0484150:CDS |
CTGTTTCTGGTTCTAAGAAA+AGG | 0.462539 | 3_4:+1396589 | Msa0484150:CDS |
ACCATCATCATCAACATAAG+AGG | 0.463223 | 3_4:-1397423 | None:intergenic |
TCCGAAGGAATTAGCTTGGT+TGG | 0.465950 | 3_4:+1400835 | Msa0484150:CDS |
GACTAAAATGTTTGTGCCGA+AGG | 0.467144 | 3_4:+1398120 | Msa0484150:CDS |
AGCTTACAACTTCTTATCCC+CGG | 0.469210 | 3_4:-1400355 | None:intergenic |
ATTTGCTTCTGCAAACTGTC+CGG | 0.470882 | 3_4:-1400388 | None:intergenic |
TGCATTATCTCCCATGCTCC+CGG | 0.471068 | 3_4:+1399557 | Msa0484150:CDS |
CATGTCAAAGGTTTAGGTGT+TGG | 0.472693 | 3_4:+1397953 | Msa0484150:CDS |
AAGCATCTGAAGAATGGAGT+TGG | 0.474397 | 3_4:+1400221 | Msa0484150:CDS |
AGCATCTGAAGAATGGAGTT+GGG | 0.480012 | 3_4:+1400222 | Msa0484150:CDS |
CTTCACAAGTTGAGTAAAAC+CGG | 0.480499 | 3_4:+1399515 | Msa0484150:CDS |
TGATGATGGTGAGGAGGAGG+AGG | 0.483110 | 3_4:+1397436 | Msa0484150:CDS |
GAAGGATTCAGTTGTGTTGG+AGG | 0.487033 | 3_4:+1398201 | Msa0484150:CDS |
GAAGAAGAACAACCCTTCAC+TGG | 0.487066 | 3_4:-1397692 | None:intergenic |
AATTGGAGAAAAGGATGAAA+GGG | 0.487266 | 3_4:+1396755 | Msa0484150:CDS |
GAAGAAGGATTCAGTTGTGT+TGG | 0.488936 | 3_4:+1398198 | Msa0484150:CDS |
TGTTCTTCTTCCACCCGGAA+TGG | 0.489106 | 3_4:+1397704 | Msa0484150:CDS |
AGGGTTACCTGTTGAAATAT+CGG | 0.489429 | 3_4:-1400248 | None:intergenic |
CTCTTCATGCATGGAGAGGT+TGG | 0.489454 | 3_4:+1400727 | Msa0484150:CDS |
AAGAAAAGGAAGGTAGAAGA+AGG | 0.496509 | 3_4:+1396603 | Msa0484150:CDS |
TCCAACCAAGCTAATTCCTT+CGG | 0.498416 | 3_4:-1400836 | None:intergenic |
TCTATCTTGCCGATCATCGC+TGG | 0.500093 | 3_4:-1398233 | None:intergenic |
TACGAGAAGCTAGCCGGAGA+AGG | 0.500137 | 3_4:+1399884 | Msa0484150:CDS |
AATGCTTTACTTGAATCTCC+TGG | 0.500283 | 3_4:+1399977 | Msa0484150:CDS |
GTCAAAGGTTTAGGTGTTGG+AGG | 0.500545 | 3_4:+1397956 | Msa0484150:CDS |
TGATGGTGAGGAGGAGGTGA+AGG | 0.503299 | 3_4:+1397310 | Msa0484150:CDS |
AAGTGATGAAATTGGAGAAA+AGG | 0.503444 | 3_4:+1396746 | Msa0484150:CDS |
GAATCCATCAGTCGATCGAC+AGG | 0.503728 | 3_4:+1400891 | Msa0484150:CDS |
TGAGTAAAACCGGTCCGCGC+AGG | 0.505272 | 3_4:+1399525 | Msa0484150:CDS |
GGAGGTGTCTCAACACAAAC+CGG | 0.505298 | 3_4:-1398271 | None:intergenic |
CTTCCCGGTTCCGGGAGCAT+GGG | 0.505880 | 3_4:-1399567 | None:intergenic |
GCAAAAGACCAAGGAGGAGG+AGG | 0.507766 | 3_4:+1398327 | Msa0484150:CDS |
GATGAAATTGATGCTAAAGA+TGG | 0.511912 | 3_4:+1396942 | Msa0484150:CDS |
ACTCGTTTCGACGATCAGAT+TGG | 0.512620 | 3_4:+1398671 | Msa0484150:CDS |
GCGTCTAGATCTCCCTTCTC+CGG | 0.512699 | 3_4:-1399897 | None:intergenic |
TGAAAGAAGTCTTATTTGGA+AGG | 0.514193 | 3_4:+1400036 | Msa0484150:CDS |
ATGCAAGGAGAATCTTTGCT+TGG | 0.517185 | 3_4:-1400798 | None:intergenic |
TCCAAGAAATTGTTCTGGAA+AGG | 0.520438 | 3_4:-1400106 | None:intergenic |
TGGTCTATGATTAAGCATAA+GGG | 0.522009 | 3_4:-1400661 | None:intergenic |
AGGCTATCAGTAGAGCATAT+AGG | 0.524058 | 3_4:+1400911 | Msa0484150:CDS |
TTTGGGAAGAATGTTCCAAT+GGG | 0.524957 | 3_4:+1397366 | Msa0484150:CDS |
TTTGGGAAGAATGTTCCAAT+GGG | 0.524957 | 3_4:+1397504 | Msa0484150:CDS |
ACATCATTGCAAACAGAAGA+AGG | 0.526835 | 3_4:-1397611 | None:intergenic |
GATCCGTAATGGTGAGAAGA+AGG | 0.526915 | 3_4:+1398075 | Msa0484150:CDS |
ACTGGAGATGGTGAGAGAAG+TGG | 0.527140 | 3_4:+1397529 | Msa0484150:CDS |
CAACAAGAATACAATGAAGA+AGG | 0.527823 | 3_4:+1398183 | Msa0484150:CDS |
ATAGCCTGTCGATCGACTGA+TGG | 0.527863 | 3_4:-1400895 | None:intergenic |
TAGAGATACACGGTCACCGC+CGG | 0.528317 | 3_4:+1398252 | Msa0484150:CDS |
TCGACGAATGCTTGTTCCGA+AGG | 0.529835 | 3_4:+1400820 | Msa0484150:CDS |
GCTTACAACTTCTTATCCCC+GGG | 0.529887 | 3_4:-1400354 | None:intergenic |
TTAAGGCTCCATATCTGTGG+AGG | 0.530474 | 3_4:-1398289 | None:intergenic |
CACCATCTCCAGTAACCCAT+TGG | 0.531131 | 3_4:-1397519 | None:intergenic |
ATCCTTCAAAAGAAGCTCCC+GGG | 0.531227 | 3_4:+1400337 | Msa0484150:CDS |
ACCGGTCCGCGCAGGGAGGG+TGG | 0.531775 | 3_4:+1399533 | Msa0484150:CDS |
ATGGATAGATTTCCCTCTGA+AGG | 0.532566 | 3_4:+1399278 | Msa0484150:CDS |
TCTCAGTTCAATGTTTCTGA+TGG | 0.533625 | 3_4:+1399356 | Msa0484150:CDS |
ATTTGGGAAGAATGTTCCAA+TGG | 0.534970 | 3_4:+1397365 | Msa0484150:CDS |
ATTTGGGAAGAATGTTCCAA+TGG | 0.534970 | 3_4:+1397503 | Msa0484150:CDS |
ATCAGTAGAGCATATAGGAT+TGG | 0.535123 | 3_4:+1400916 | Msa0484150:CDS |
GGAGGAACAGGAACCATTGT+GGG | 0.536155 | 3_4:+1398345 | Msa0484150:CDS |
TCTCCCATGCTCCCGGAACC+GGG | 0.537332 | 3_4:+1399564 | Msa0484150:CDS |
CCTTTGTGAACATGAACAAA+GGG | 0.537964 | 3_4:-1400310 | None:intergenic |
AACAAGCATTCGTCGATGCA+AGG | 0.538316 | 3_4:-1400813 | None:intergenic |
TAAATGATGCCAGCGATGAT+CGG | 0.538765 | 3_4:+1398224 | Msa0484150:CDS |
TGTGATGAGAAGATGTTTGA+GGG | 0.539694 | 3_4:+1396867 | Msa0484150:CDS |
TTGTAAGCTGACTTTGAAGC+CGG | 0.542225 | 3_4:+1400369 | Msa0484150:CDS |
TGTTTGATCTTATCATCAGA+AGG | 0.543243 | 3_4:-1400268 | None:intergenic |
ACTTACCATCTGCTCACTGA+AGG | 0.543258 | 3_4:+1400958 | Msa0484150:CDS |
TGATGATGATGAGGAGGAGG+AGG | 0.545572 | 3_4:+1397163 | Msa0484150:CDS |
CTTCGATTGAATCCATATGT+AGG | 0.545655 | 3_4:+1400553 | Msa0484150:CDS |
CCCTTTGTTCATGTTCACAA+AGG | 0.545734 | 3_4:+1400310 | Msa0484150:CDS |
GAGTAAAACCGGTCCGCGCA+GGG | 0.548662 | 3_4:+1399526 | Msa0484150:CDS |
AACATGCAAATGTGGAGAAG+AGG | 0.549369 | 3_4:+1399933 | Msa0484150:CDS |
TTCCAATGGGTTAGCGAGAG+AGG | 0.550253 | 3_4:+1397379 | Msa0484150:CDS |
ACGAGAAGCTAGCCGGAGAA+GGG | 0.550526 | 3_4:+1399885 | Msa0484150:CDS |
CTCCCGGAACCGGGAAGACA+AGG | 0.550682 | 3_4:+1399573 | Msa0484150:CDS |
AAAGAGAAAACATGCAAATG+TGG | 0.550930 | 3_4:+1399925 | Msa0484150:CDS |
GGTTTGTTAGTGCTAGATGA+AGG | 0.550966 | 3_4:+1399998 | Msa0484150:CDS |
AATGTTGGTGATTCTGATGA+AGG | 0.552169 | 3_4:+1397920 | Msa0484150:CDS |
AAATTGGAGAAAAGGATGAA+AGG | 0.552201 | 3_4:+1396754 | Msa0484150:CDS |
TTGTTAATTGGTCTAATAAG+CGG | 0.552904 | 3_4:+1399780 | Msa0484150:CDS |
CAAATATGTCTCACAGTTGG+TGG | 0.553447 | 3_4:+1398733 | Msa0484150:CDS |
CAGACTGAGGAAAGTGGAGG+AGG | 0.554944 | 3_4:+1396915 | Msa0484150:CDS |
GGATGGTGAAACTGATTTCG+TGG | 0.555168 | 3_4:+1399822 | Msa0484150:CDS |
CAGAAAGGATGATCCGCTTG+CGG | 0.555202 | 3_4:-1400078 | None:intergenic |
CGAAAATTCAAACCCGCAAG+CGG | 0.555877 | 3_4:+1400065 | Msa0484150:CDS |
TTCCAATGGGTTACTGGAGA+TGG | 0.556184 | 3_4:+1397517 | Msa0484150:CDS |
TTCAGCTTCTGATTCTCTAA+GGG | 0.556946 | 3_4:-1398383 | None:intergenic |
GAAGTACAGACTGAGGAAAG+TGG | 0.558470 | 3_4:+1396909 | Msa0484150:CDS |
TCCTCTTATGTTGATGATGA+TGG | 0.560758 | 3_4:+1397422 | Msa0484150:CDS |
GACAGACAATCCTTAATCCA+TGG | 0.561344 | 3_4:+1400757 | Msa0484150:CDS |
TCTGGAAAGGAGTTCCAGAA+AGG | 0.562873 | 3_4:-1400093 | None:intergenic |
CAACCTCTCCATGCATGAAG+AGG | 0.563309 | 3_4:-1400726 | None:intergenic |
GGTGGAGGAGTTAGTGAGAG+AGG | 0.563527 | 3_4:+1397244 | Msa0484150:CDS |
GATCCTTCAAAAGAAGCTCC+CGG | 0.567277 | 3_4:+1400336 | Msa0484150:CDS |
CACGTCTTTAAACTGGACAA+TGG | 0.569347 | 3_4:+1400693 | Msa0484150:CDS |
TCGTGTTCACAAAGAGTGGA+TGG | 0.570341 | 3_4:-1398647 | None:intergenic |
ATGTGATGAGAAGATGTTTG+AGG | 0.570719 | 3_4:+1396866 | Msa0484150:CDS |
ATCATCATCATCAACAGAAG+AGG | 0.571859 | 3_4:-1397138 | None:intergenic |
CAGTCCCTTCAGTGAGCAGA+TGG | 0.572101 | 3_4:-1400963 | None:intergenic |
GCAAACAGGCCGAAAAGCAC+AGG | 0.572204 | 3_4:+1401004 | Msa0484150:CDS |
TTCTGGTTCTAAGAAAAGGA+AGG | 0.573902 | 3_4:+1396593 | Msa0484150:CDS |
AAAATACTTTGATGTGGTGG+AGG | 0.574268 | 3_4:+1397229 | Msa0484150:CDS |
AAGGAAATCCTCTTCATGCA+TGG | 0.578935 | 3_4:+1400718 | Msa0484150:CDS |
TGGTCATTCTAAGGTTCACA+AGG | 0.580432 | 3_4:+1397826 | Msa0484150:CDS |
GGCAGATTTAGGATCCGTAA+TGG | 0.580764 | 3_4:+1398064 | Msa0484150:CDS |
GTTTGATCTTATCATCAGAA+GGG | 0.582154 | 3_4:-1400267 | None:intergenic |
TGTTAGCATCATTGAAGCCA+TGG | 0.584410 | 3_4:-1400774 | None:intergenic |
AGAATCAGAAGCTGAATCCA+TGG | 0.584967 | 3_4:+1398390 | Msa0484150:CDS |
AGGGTTGTTCTTCTTCCACC+CGG | 0.585849 | 3_4:+1397699 | Msa0484150:CDS |
AAATTTAGGGACAAATGACA+TGG | 0.586648 | 3_4:+1398619 | Msa0484150:CDS |
GTTTGTTACAGTTCAGTCGA+AGG | 0.587090 | 3_4:+1401146 | Msa0484150:CDS |
AGTGCAAAAGACCAAGGAGG+AGG | 0.587239 | 3_4:+1398324 | Msa0484150:CDS |
ACTAATTTCTCTCATAATGA+CGG | 0.588421 | 3_4:+1399389 | Msa0484150:CDS |
AATTTGTACGAGAAGCTAGC+CGG | 0.588813 | 3_4:+1399878 | Msa0484150:CDS |
TGATGATGATGGTGAGGAGG+AGG | 0.591336 | 3_4:+1397433 | Msa0484150:CDS |
TTGTTCCGAAGGAATTAGCT+TGG | 0.594878 | 3_4:+1400831 | Msa0484150:CDS |
AGAGGAATCTGTTGTCGACA+AGG | 0.595159 | 3_4:+1400516 | Msa0484150:CDS |
GATCAAATATGTCTCACAGT+TGG | 0.596257 | 3_4:+1398730 | Msa0484150:CDS |
TGTGGTTCCTAAGAATGGTG+AGG | 0.596293 | 3_4:+1396797 | Msa0484150:CDS |
CTTACCATCTGCTCACTGAA+GGG | 0.596356 | 3_4:+1400959 | Msa0484150:CDS |
GAGAATGTGAATGTGAATGT+TGG | 0.597946 | 3_4:+1397905 | Msa0484150:CDS |
GGAAAACAGAAACATGTCAA+AGG | 0.598063 | 3_4:+1397941 | Msa0484150:CDS |
AGGAGGAACAGGAACCATTG+TGG | 0.598645 | 3_4:+1398344 | Msa0484150:CDS |
AAAACCGGTCCGCGCAGGGA+GGG | 0.599737 | 3_4:+1399530 | Msa0484150:CDS |
TGATGATGATGGTGAGGAGG+AGG | 0.599805 | 3_4:+1397304 | Msa0484150:CDS |
GGAGGAGGAGGACAATGGGG+AGG | 0.607920 | 3_4:+1397331 | Msa0484150:CDS |
CAAGTAAGTAACAAACTCGC+GGG | 0.608943 | 3_4:-1399662 | None:intergenic |
ACCTTTGTGAACATGAACAA+AGG | 0.610077 | 3_4:-1400311 | None:intergenic |
TGTTGATGATGATGGTGAGG+AGG | 0.612229 | 3_4:+1397430 | Msa0484150:CDS |
GAGTTTAAGAAATGGGACGT+TGG | 0.622968 | 3_4:+1399692 | Msa0484150:CDS |
AAATGCGAATCAAAGAGTGT+AGG | 0.623215 | 3_4:+1397737 | Msa0484150:CDS |
ATTCGAGGAAAAGAGACGGA+TGG | 0.623401 | 3_4:-1400477 | None:intergenic |
AGTGTCGTGTTCACAAAGAG+TGG | 0.624128 | 3_4:-1398651 | None:intergenic |
GGAGATGGTGAGAGAAGTGG+AGG | 0.625530 | 3_4:+1397532 | Msa0484150:CDS |
TTTAAACTGGACAATGGGGA+AGG | 0.628299 | 3_4:+1400699 | Msa0484150:CDS |
GCGAAAATACTTTGATGTGG+TGG | 0.632595 | 3_4:+1397226 | Msa0484150:CDS |
CCAAGTAAGTAACAAACTCG+CGG | 0.635696 | 3_4:-1399663 | None:intergenic |
AAGGAATCTATGGATAACAA+TGG | 0.639532 | 3_4:+1398094 | Msa0484150:CDS |
GAGAAGGGAGATCTAGACGC+AGG | 0.640510 | 3_4:+1399900 | Msa0484150:CDS |
TCACATTCGAGGAAAAGAGA+CGG | 0.643519 | 3_4:-1400481 | None:intergenic |
GGAAGAAGTGCAAAAGACCA+AGG | 0.646136 | 3_4:+1398318 | Msa0484150:CDS |
TGCCCCAAAAGCATTCTGCA+AGG | 0.647372 | 3_4:-1398162 | None:intergenic |
GAGTAAGGATACAACACGGA+TGG | 0.647773 | 3_4:+1399805 | Msa0484150:CDS |
TTCTGAGACGAATAATGTGG+AGG | 0.647912 | 3_4:+1397571 | Msa0484150:CDS |
TGATGATGATGATGGTGAGG+AGG | 0.651517 | 3_4:+1397301 | Msa0484150:CDS |
TTATGTTGATGATGATGGTG+AGG | 0.656271 | 3_4:+1397427 | Msa0484150:CDS |
AAAATGACGGAGAATAAAGG+GGG | 0.657226 | 3_4:+1398031 | Msa0484150:CDS |
TCCTTCAAAAGAAGCTCCCG+GGG | 0.657992 | 3_4:+1400338 | Msa0484150:CDS |
AGAAAATGAGACTAGTGATG+AGG | 0.658340 | 3_4:+1397055 | Msa0484150:CDS |
AATTTCTGAGACGAATAATG+TGG | 0.659505 | 3_4:+1397568 | Msa0484150:CDS |
AGATTGGTGTATATTGCAGA+TGG | 0.659642 | 3_4:+1398687 | Msa0484150:CDS |
TAAAACCGGTCCGCGCAGGG+AGG | 0.660337 | 3_4:+1399529 | Msa0484150:CDS |
AATCCTCTTCATGCATGGAG+AGG | 0.664929 | 3_4:+1400723 | Msa0484150:CDS |
AAGCAAAACAAGAAAAGACG+AGG | 0.666095 | 3_4:+1397993 | Msa0484150:CDS |
GGTCATTCTAAGGTTCACAA+GGG | 0.669674 | 3_4:+1397827 | Msa0484150:CDS |
GTACAGACTGAGGAAAGTGG+AGG | 0.672284 | 3_4:+1396912 | Msa0484150:CDS |
AGTGGAATAGAACCAAACAA+TGG | 0.673891 | 3_4:-1396528 | None:intergenic |
TCATCTAGCACTAACAAACC+AGG | 0.674173 | 3_4:-1399995 | None:intergenic |
GGTGTATATTGCAGATGGTG+CGG | 0.678372 | 3_4:+1398692 | Msa0484150:CDS |
AGCAAAACAAGAAAAGACGA+GGG | 0.678457 | 3_4:+1397994 | Msa0484150:CDS |
CTATGATTAAGCATAAGGGA+CGG | 0.678748 | 3_4:-1400657 | None:intergenic |
CTTCGGTTCTCCATTCCGGG+TGG | 0.679200 | 3_4:-1397714 | None:intergenic |
ATGCAGCCACCCTCCCTGCG+CGG | 0.682271 | 3_4:-1399539 | None:intergenic |
AATTTAGGGACAAATGACAT+GGG | 0.692054 | 3_4:+1398620 | Msa0484150:CDS |
ATATCCATTTGATCCCACAA+TGG | 0.697640 | 3_4:-1398358 | None:intergenic |
GGTATCGTGTTAGGAAACGA+AGG | 0.714038 | 3_4:-1400157 | None:intergenic |
CGTCTTTAAACTGGACAATG+GGG | 0.715255 | 3_4:+1400695 | Msa0484150:CDS |
TGGGCGAAAATACTTTGATG+TGG | 0.716943 | 3_4:+1397223 | Msa0484150:CDS |
AATGACGGAGAATAAAGGGG+GGG | 0.719313 | 3_4:+1398033 | Msa0484150:CDS |
GGTGTCTCAACACAAACCGG+CGG | 0.732422 | 3_4:-1398268 | None:intergenic |
AAATGACGGAGAATAAAGGG+GGG | 0.742861 | 3_4:+1398032 | Msa0484150:CDS |
ATATTGCAGATGGTGCGGTG+TGG | 0.748614 | 3_4:+1398697 | Msa0484150:CDS |
GGCTGAGTAAGGATACAACA+CGG | 0.749926 | 3_4:+1399801 | Msa0484150:CDS |
AGAAGTGCAAAAGACCAAGG+AGG | 0.752453 | 3_4:+1398321 | Msa0484150:CDS |
ATCGGCAAGATAGAGATACA+CGG | 0.757457 | 3_4:+1398242 | Msa0484150:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAATAACCATTGAGAAAA+AGG | + | chr3_4:1397658-1397677 | Msa0484150:CDS | 20.0% |
!!! | AAAATAATCCTTTTTCTCAA+TGG | - | chr3_4:1397669-1397688 | None:intergenic | 20.0% |
!! | CTATAGTTCACAAATTAAAA+TGG | - | chr3_4:1398453-1398472 | None:intergenic | 20.0% |
!!! | CATTTTAATTTGTGAACTAT+AGG | + | chr3_4:1398451-1398470 | Msa0484150:intron | 20.0% |
!!! | ATCAAATCAGTGATATTTTT+AGG | + | chr3_4:1398552-1398571 | Msa0484150:intron | 20.0% |
!!! | TCAAATCAGTGATATTTTTA+GGG | + | chr3_4:1398553-1398572 | Msa0484150:intron | 20.0% |
!! | TTGATGTATGTAAAATAACT+TGG | + | chr3_4:1398772-1398791 | Msa0484150:intron | 20.0% |
!! | CAAACAATTAAAATTGCTTA+TGG | + | chr3_4:1400285-1400304 | Msa0484150:CDS | 20.0% |
!! | ATTTCCATTGATTATGATGA+TGG | + | chr3_4:1396663-1396682 | Msa0484150:CDS | 25.0% |
! | AAAGTTGAAAGTGATGAAAT+TGG | + | chr3_4:1396738-1396757 | Msa0484150:CDS | 25.0% |
!! | AGTTAAAGAAGAATCTTTTG+TGG | + | chr3_4:1396779-1396798 | Msa0484150:CDS | 25.0% |
!! | ATGATGATGAAGATGAAAAA+GGG | + | chr3_4:1396835-1396854 | Msa0484150:CDS | 25.0% |
! | TTAGAATGACCAAAACTTAA+AGG | - | chr3_4:1397818-1397837 | None:intergenic | 25.0% |
!!! | TTTAAGTTTTGGTCATTCTA+AGG | + | chr3_4:1397817-1397836 | Msa0484150:CDS | 25.0% |
! | ATAAACTTTAGCATCATCTT+TGG | - | chr3_4:1397885-1397904 | None:intergenic | 25.0% |
! | TTCAGATAAACCAAAAATGA+CGG | + | chr3_4:1398018-1398037 | Msa0484150:CDS | 25.0% |
!!! | GATTTTTTCTGTTTTTTCTC+AGG | + | chr3_4:1399031-1399050 | Msa0484150:intron | 25.0% |
!! | AGTTTGCTTTGATTTCATTA+TGG | + | chr3_4:1399122-1399141 | Msa0484150:intron | 25.0% |
! | ACTAATTTCTCTCATAATGA+CGG | + | chr3_4:1399389-1399408 | Msa0484150:CDS | 25.0% |
! | AGATTGTTCAAATTGTGAAA+TGG | - | chr3_4:1399722-1399741 | None:intergenic | 25.0% |
! | TTGAACAATCTCAAATTATC+CGG | + | chr3_4:1399731-1399750 | Msa0484150:CDS | 25.0% |
!!! | ATGCTGTTGATTTTGTTAAT+TGG | + | chr3_4:1399768-1399787 | Msa0484150:CDS | 25.0% |
!! | TTGTTAATTGGTCTAATAAG+CGG | + | chr3_4:1399780-1399799 | Msa0484150:CDS | 25.0% |
! | ATAAGACTTCTTTCATTTCT+TGG | - | chr3_4:1400031-1400050 | None:intergenic | 25.0% |
!!! | GAAATGAAAGAAGTCTTATT+TGG | + | chr3_4:1400032-1400051 | Msa0484150:CDS | 25.0% |
!!! | ATAAAAAAGCATCTGAAGAA+TGG | + | chr3_4:1400215-1400234 | Msa0484150:CDS | 25.0% |
! | AACAAATTCAACCAGAAATT+TGG | - | chr3_4:1400587-1400606 | None:intergenic | 25.0% |
!!! | TTTGCGATGTTTTATTTTCT+CGG | - | chr3_4:1400989-1401008 | None:intergenic | 25.0% |
!! | ACATTTTCAGGAACAACAAA+AGG | - | chr3_4:1396636-1396655 | None:intergenic | 30.0% |
! | GAAATAACCTGAACATTTTC+AGG | - | chr3_4:1396648-1396667 | None:intergenic | 30.0% |
ATCTCCATCATCATAATCAA+TGG | - | chr3_4:1396670-1396689 | None:intergenic | 30.0% | |
!! | TATGATGATGGAGATGAAAA+AGG | + | chr3_4:1396675-1396694 | Msa0484150:CDS | 30.0% |
!! | ATGATGATGGAGATGAAAAA+GGG | + | chr3_4:1396676-1396695 | Msa0484150:CDS | 30.0% |
AAGTGATGAAATTGGAGAAA+AGG | + | chr3_4:1396746-1396765 | Msa0484150:CDS | 30.0% | |
AAATTGGAGAAAAGGATGAA+AGG | + | chr3_4:1396754-1396773 | Msa0484150:CDS | 30.0% | |
AATTGGAGAAAAGGATGAAA+GGG | + | chr3_4:1396755-1396774 | Msa0484150:CDS | 30.0% | |
ATCTTCATCATCATCATCAA+TGG | - | chr3_4:1396829-1396848 | None:intergenic | 30.0% | |
! | GATGATGATGAAGATGAAAA+AGG | + | chr3_4:1396834-1396853 | Msa0484150:CDS | 30.0% |
GATGAAATTGATGCTAAAGA+TGG | + | chr3_4:1396942-1396961 | Msa0484150:CDS | 30.0% | |
!! | TGAGGATTTTATAGTTGATG+AGG | + | chr3_4:1397073-1397092 | Msa0484150:CDS | 30.0% |
ATCATCATCATCAACATAAG+AGG | - | chr3_4:1397291-1397310 | None:intergenic | 30.0% | |
!! | TATGTTGATGATGATGATGA+TGG | + | chr3_4:1397293-1397312 | Msa0484150:CDS | 30.0% |
!! | AATTTCTGAGACGAATAATG+TGG | + | chr3_4:1397568-1397587 | Msa0484150:CDS | 30.0% |
!!! | GATTATTTTGATCCAGTGAA+GGG | + | chr3_4:1397680-1397699 | Msa0484150:CDS | 30.0% |
! | ATCATCTTTGGATTTTGCTT+TGG | - | chr3_4:1397873-1397892 | None:intergenic | 30.0% |
!!! | TCTTTTCTTGTTTTGCTTGA+GGG | - | chr3_4:1397991-1398010 | None:intergenic | 30.0% |
! | CAAAAATGACGGAGAATAAA+GGG | + | chr3_4:1398029-1398048 | Msa0484150:CDS | 30.0% |
! | AAAAATGACGGAGAATAAAG+GGG | + | chr3_4:1398030-1398049 | Msa0484150:CDS | 30.0% |
AAGGAATCTATGGATAACAA+TGG | + | chr3_4:1398094-1398113 | Msa0484150:CDS | 30.0% | |
CAACAAGAATACAATGAAGA+AGG | + | chr3_4:1398183-1398202 | Msa0484150:CDS | 30.0% | |
TATCTGCAGATTGGAAATTT+AGG | + | chr3_4:1398605-1398624 | Msa0484150:intron | 30.0% | |
ATCTGCAGATTGGAAATTTA+GGG | + | chr3_4:1398606-1398625 | Msa0484150:intron | 30.0% | |
AAATTTAGGGACAAATGACA+TGG | + | chr3_4:1398619-1398638 | Msa0484150:CDS | 30.0% | |
AATTTAGGGACAAATGACAT+GGG | + | chr3_4:1398620-1398639 | Msa0484150:CDS | 30.0% | |
TTCTATGAGATTCATACAGT+TGG | + | chr3_4:1399089-1399108 | Msa0484150:intron | 30.0% | |
GTAAATGTTTCACACTTTGA+TGG | + | chr3_4:1399332-1399351 | Msa0484150:CDS | 30.0% | |
! | TTCTTTTTGATGAGGATACA+AGG | - | chr3_4:1399453-1399472 | None:intergenic | 30.0% |
TTGTATCCTCATCAAAAAGA+AGG | + | chr3_4:1399452-1399471 | Msa0484150:CDS | 30.0% | |
TTCATTTGGAAAAACTTGAC+AGG | + | chr3_4:1399482-1399501 | Msa0484150:CDS | 30.0% | |
GGAAGATGAGTTTAAGAAAT+GGG | + | chr3_4:1399685-1399704 | Msa0484150:CDS | 30.0% | |
!! | TACAAAGAAAAGAGCATTCT+GGG | + | chr3_4:1399845-1399864 | Msa0484150:CDS | 30.0% |
AAAGAGAAAACATGCAAATG+TGG | + | chr3_4:1399925-1399944 | Msa0484150:CDS | 30.0% | |
!! | TGAAAGAAGTCTTATTTGGA+AGG | + | chr3_4:1400036-1400055 | Msa0484150:CDS | 30.0% |
!!! | CTTTTTTATATTCCTGCTTC+AGG | - | chr3_4:1400204-1400223 | None:intergenic | 30.0% |
GTTTGATCTTATCATCAGAA+GGG | - | chr3_4:1400270-1400289 | None:intergenic | 30.0% | |
TGTTTGATCTTATCATCAGA+AGG | - | chr3_4:1400271-1400290 | None:intergenic | 30.0% | |
!! | ATGTGATCTTTTGAAAGAAG+AGG | + | chr3_4:1400498-1400517 | Msa0484150:CDS | 30.0% |
TGGTCTATGATTAAGCATAA+GGG | - | chr3_4:1400664-1400683 | None:intergenic | 30.0% | |
TTGGTCTATGATTAAGCATA+AGG | - | chr3_4:1400665-1400684 | None:intergenic | 30.0% | |
TTAAAGACGTGTGCAATAAT+TGG | - | chr3_4:1400684-1400703 | None:intergenic | 30.0% | |
! | AAGTGTATACAACCTTTTTC+TGG | - | chr3_4:1400942-1400961 | None:intergenic | 30.0% |
GAAAATAAAACATCGCAAAC+AGG | + | chr3_4:1400990-1401009 | Msa0484150:CDS | 30.0% | |
!!! | GTTATCTGAACTGGTTTTTT+CGG | + | chr3_4:1401026-1401045 | Msa0484150:CDS | 30.0% |
AGCAAGAATGTTCCATTGTT+TGG | + | chr3_4:1396516-1396535 | Msa0484150:CDS | 35.0% | |
AGTGGAATAGAACCAAACAA+TGG | - | chr3_4:1396531-1396550 | None:intergenic | 35.0% | |
!! | TTTGGTTCTATTCCACTTGT+TGG | + | chr3_4:1396534-1396553 | Msa0484150:CDS | 35.0% |
!! | CACTTGTTGGTTCATCAAAA+CGG | + | chr3_4:1396547-1396566 | Msa0484150:CDS | 35.0% |
!!! | AAAACGGAGAAAGAGTGTTT+TGG | + | chr3_4:1396563-1396582 | Msa0484150:CDS | 35.0% |
!! | CTGTTTCTGGTTCTAAGAAA+AGG | + | chr3_4:1396589-1396608 | Msa0484150:CDS | 35.0% |
!! | TTCTGGTTCTAAGAAAAGGA+AGG | + | chr3_4:1396593-1396612 | Msa0484150:CDS | 35.0% |
AAGAAAAGGAAGGTAGAAGA+AGG | + | chr3_4:1396603-1396622 | Msa0484150:CDS | 35.0% | |
TGTTGTTCCTGAAAATGTTC+AGG | + | chr3_4:1396638-1396657 | Msa0484150:CDS | 35.0% | |
! | TCTTTTGTGGTTCCTAAGAA+TGG | + | chr3_4:1396792-1396811 | Msa0484150:CDS | 35.0% |
GAAATAACCTCACCATTCTT+AGG | - | chr3_4:1396807-1396826 | None:intergenic | 35.0% | |
TGATGAAGATGAAAAAGGGT+CGG | + | chr3_4:1396839-1396858 | Msa0484150:CDS | 35.0% | |
ATGTGATGAGAAGATGTTTG+AGG | + | chr3_4:1396866-1396885 | Msa0484150:CDS | 35.0% | |
TGTGATGAGAAGATGTTTGA+GGG | + | chr3_4:1396867-1396886 | Msa0484150:CDS | 35.0% | |
! | TGAAAAAGAAGTACAGACTG+AGG | + | chr3_4:1396902-1396921 | Msa0484150:CDS | 35.0% |
AGAAAATGAGACTAGTGATG+AGG | + | chr3_4:1397055-1397074 | Msa0484150:CDS | 35.0% | |
! | AGTGATGATGAAAGTTCTTC+TGG | + | chr3_4:1397113-1397132 | Msa0484150:CDS | 35.0% |
ATCATCATCATCAACAGAAG+AGG | - | chr3_4:1397141-1397160 | None:intergenic | 35.0% | |
! | TGATGATGATGATGATGATG+AGG | + | chr3_4:1397148-1397167 | Msa0484150:CDS | 35.0% |
GATGAGGAGAAGAAGAAAAA+AGG | + | chr3_4:1397200-1397219 | Msa0484150:CDS | 35.0% | |
AGGAGAAGAAGAAAAAAGGT+GGG | + | chr3_4:1397204-1397223 | Msa0484150:CDS | 35.0% | |
AAAATACTTTGATGTGGTGG+AGG | + | chr3_4:1397229-1397248 | Msa0484150:CDS | 35.0% | |
GGAGGATTTGAGTAAGATTT+GGG | + | chr3_4:1397349-1397368 | Msa0484150:CDS | 35.0% | |
ATTTGGGAAGAATGTTCCAA+TGG | + | chr3_4:1397365-1397384 | Msa0484150:CDS | 35.0% | |
TTTGGGAAGAATGTTCCAAT+GGG | + | chr3_4:1397366-1397385 | Msa0484150:CDS | 35.0% | |
!! | TCCTCTTATGTTGATGATGA+TGG | + | chr3_4:1397287-1397306 | Msa0484150:CDS | 35.0% |
ACCATCATCATCAACATAAG+AGG | - | chr3_4:1397426-1397445 | None:intergenic | 35.0% | |
!! | TTATGTTGATGATGATGGTG+AGG | + | chr3_4:1397427-1397446 | Msa0484150:CDS | 35.0% |
GGAGGATTTGAGTAAGATTT+GGG | + | chr3_4:1397349-1397368 | Msa0484150:CDS | 35.0% | |
ATTTGGGAAGAATGTTCCAA+TGG | + | chr3_4:1397365-1397384 | Msa0484150:CDS | 35.0% | |
TTTGGGAAGAATGTTCCAAT+GGG | + | chr3_4:1397366-1397385 | Msa0484150:CDS | 35.0% | |
ACATCATTGCAAACAGAAGA+AGG | - | chr3_4:1397614-1397633 | None:intergenic | 35.0% | |
!!! | GGATTATTTTGATCCAGTGA+AGG | + | chr3_4:1397679-1397698 | Msa0484150:CDS | 35.0% |
! | CTCTTTGATTCGCATTTCTT+CGG | - | chr3_4:1397734-1397753 | None:intergenic | 35.0% |
! | AAATGCGAATCAAAGAGTGT+AGG | + | chr3_4:1397737-1397756 | Msa0484150:CDS | 35.0% |
!! | GCTGATCAACCTTTAAGTTT+TGG | + | chr3_4:1397806-1397825 | Msa0484150:CDS | 35.0% |
! | TTTGGATTTTGCTTTGGCAT+TGG | - | chr3_4:1397867-1397886 | None:intergenic | 35.0% |
GAGAATGTGAATGTGAATGT+TGG | + | chr3_4:1397905-1397924 | Msa0484150:CDS | 35.0% | |
!! | AATGTTGGTGATTCTGATGA+AGG | + | chr3_4:1397920-1397939 | Msa0484150:CDS | 35.0% |
GGAAAACAGAAACATGTCAA+AGG | + | chr3_4:1397941-1397960 | Msa0484150:CDS | 35.0% | |
CAGAAACATGTCAAAGGTTT+AGG | + | chr3_4:1397947-1397966 | Msa0484150:CDS | 35.0% | |
!!! | CTTTTCTTGTTTTGCTTGAG+GGG | - | chr3_4:1397990-1398009 | None:intergenic | 35.0% |
!!! | GTCTTTTCTTGTTTTGCTTG+AGG | - | chr3_4:1397992-1398011 | None:intergenic | 35.0% |
AAGCAAAACAAGAAAAGACG+AGG | + | chr3_4:1397993-1398012 | Msa0484150:CDS | 35.0% | |
AGCAAAACAAGAAAAGACGA+GGG | + | chr3_4:1397994-1398013 | Msa0484150:CDS | 35.0% | |
!! | CCTTTATTCTCCGTCATTTT+TGG | - | chr3_4:1398031-1398050 | None:intergenic | 35.0% |
! | CCAAAAATGACGGAGAATAA+AGG | + | chr3_4:1398028-1398047 | Msa0484150:CDS | 35.0% |
! | AAAATGACGGAGAATAAAGG+GGG | + | chr3_4:1398031-1398050 | Msa0484150:CDS | 35.0% |
AATAAAGGGGGGGATTATAA+AGG | + | chr3_4:1398043-1398062 | Msa0484150:CDS | 35.0% | |
GGGATTATAAAGGCAGATTT+AGG | + | chr3_4:1398053-1398072 | Msa0484150:CDS | 35.0% | |
ATTCCTTCTTCTCACCATTA+CGG | - | chr3_4:1398081-1398100 | None:intergenic | 35.0% | |
!!! | TTTTTAAGGCTCCATATCTG+TGG | - | chr3_4:1398295-1398314 | None:intergenic | 35.0% |
ACAGATATGGAGCCTTAAAA+AGG | + | chr3_4:1398294-1398313 | Msa0484150:CDS | 35.0% | |
ATATCCATTTGATCCCACAA+TGG | - | chr3_4:1398361-1398380 | None:intergenic | 35.0% | |
TTCAGCTTCTGATTCTCTAA+GGG | - | chr3_4:1398386-1398405 | None:intergenic | 35.0% | |
ATTCAGCTTCTGATTCTCTA+AGG | - | chr3_4:1398387-1398406 | None:intergenic | 35.0% | |
CTTAAAGAGCAGAATTACCA+TGG | - | chr3_4:1398410-1398429 | None:intergenic | 35.0% | |
! | AACTATAGGACTAGTGCTTA+AGG | + | chr3_4:1398465-1398484 | Msa0484150:intron | 35.0% |
AGATTGGTGTATATTGCAGA+TGG | + | chr3_4:1398687-1398706 | Msa0484150:CDS | 35.0% | |
GATCAAATATGTCTCACAGT+TGG | + | chr3_4:1398730-1398749 | Msa0484150:CDS | 35.0% | |
!!! | CGCTGCAATATTTTGATAAG+AGG | + | chr3_4:1399218-1399237 | Msa0484150:intron | 35.0% |
CATGTTGTTCATGACATAGA+TGG | + | chr3_4:1399259-1399278 | Msa0484150:intron | 35.0% | |
!!! | TTTTTTCCAGAACCTTCAGA+GGG | - | chr3_4:1399293-1399312 | None:intergenic | 35.0% |
! | TCTCAGTTCAATGTTTCTGA+TGG | + | chr3_4:1399356-1399375 | Msa0484150:CDS | 35.0% |
CTTTCACATCATCAGGAATT+AGG | - | chr3_4:1399427-1399446 | None:intergenic | 35.0% | |
AAGGATTCTTTCACATCATC+AGG | - | chr3_4:1399434-1399453 | None:intergenic | 35.0% | |
! | TCAAAGCCTTCTTTTTGATG+AGG | - | chr3_4:1399461-1399480 | None:intergenic | 35.0% |
!! | AAGAAGGCTTTGAGTTCATT+TGG | + | chr3_4:1399468-1399487 | Msa0484150:CDS | 35.0% |
! | CTTCACAAGTTGAGTAAAAC+CGG | + | chr3_4:1399515-1399534 | Msa0484150:CDS | 35.0% |
ACAATAACTGGCAAGCATTT+AGG | - | chr3_4:1399638-1399657 | None:intergenic | 35.0% | |
GGGAAGATGAGTTTAAGAAA+TGG | + | chr3_4:1399684-1399703 | Msa0484150:CDS | 35.0% | |
!! | GTACAAAGAAAAGAGCATTC+TGG | + | chr3_4:1399844-1399863 | Msa0484150:CDS | 35.0% |
AATGCTTTACTTGAATCTCC+TGG | + | chr3_4:1399977-1399996 | Msa0484150:CDS | 35.0% | |
TCCTTTCCAGAACAATTTCT+TGG | + | chr3_4:1400105-1400124 | Msa0484150:CDS | 35.0% | |
!! | TCCAAGAAATTGTTCTGGAA+AGG | - | chr3_4:1400109-1400128 | None:intergenic | 35.0% |
ACAGTTCCAAGAAATTGTTC+TGG | - | chr3_4:1400114-1400133 | None:intergenic | 35.0% | |
!!! | CAAAACTTTTTCAGCTCATG+CGG | - | chr3_4:1400181-1400200 | None:intergenic | 35.0% |
AGGGTTACCTGTTGAAATAT+CGG | - | chr3_4:1400251-1400270 | None:intergenic | 35.0% | |
CCTTTGTGAACATGAACAAA+GGG | - | chr3_4:1400313-1400332 | None:intergenic | 35.0% | |
ACCTTTGTGAACATGAACAA+AGG | - | chr3_4:1400314-1400333 | None:intergenic | 35.0% | |
CTTTCAAAAGATCACATTCG+AGG | - | chr3_4:1400495-1400514 | None:intergenic | 35.0% | |
CTTCGATTGAATCCATATGT+AGG | + | chr3_4:1400553-1400572 | Msa0484150:CDS | 35.0% | |
!! | TTGGTTTTCACACCTACATA+TGG | - | chr3_4:1400568-1400587 | None:intergenic | 35.0% |
AGGTGTGAAAACCAAATTTC+TGG | + | chr3_4:1400573-1400592 | Msa0484150:CDS | 35.0% | |
CTATGATTAAGCATAAGGGA+CGG | - | chr3_4:1400660-1400679 | None:intergenic | 35.0% | |
TATTGCACACGTCTTTAAAC+TGG | + | chr3_4:1400686-1400705 | Msa0484150:CDS | 35.0% | |
ACGTCTTTAAACTGGACAAT+GGG | + | chr3_4:1400694-1400713 | Msa0484150:CDS | 35.0% | |
! | ATCATTGAAGCCATGGATTA+AGG | - | chr3_4:1400770-1400789 | None:intergenic | 35.0% |
TTGTACTACTTGATGTCGTT+TGG | + | chr3_4:1400869-1400888 | Msa0484150:CDS | 35.0% | |
ATCAGTAGAGCATATAGGAT+TGG | + | chr3_4:1400916-1400935 | Msa0484150:CDS | 35.0% | |
!! | ATATAGGATTGGCCAGAAAA+AGG | + | chr3_4:1400927-1400946 | Msa0484150:CDS | 35.0% |
! | TTCAGATAACCTGTGCTTTT+CGG | - | chr3_4:1401016-1401035 | None:intergenic | 35.0% |
!! | CGTTTTGATGAACCAACAAG+TGG | - | chr3_4:1396549-1396568 | None:intergenic | 40.0% |
!! | AGTGTTTTGGACTCTGTTTC+TGG | + | chr3_4:1396576-1396595 | Msa0484150:CDS | 40.0% |
! | TGATGATGATGATGATGAGG+AGG | + | chr3_4:1397157-1397176 | Msa0484150:CDS | 40.0% |
GAGGAGAAGAAGAAAAAAGG+TGG | + | chr3_4:1397203-1397222 | Msa0484150:CDS | 40.0% | |
TGGGCGAAAATACTTTGATG+TGG | + | chr3_4:1397223-1397242 | Msa0484150:CDS | 40.0% | |
GCGAAAATACTTTGATGTGG+TGG | + | chr3_4:1397226-1397245 | Msa0484150:CDS | 40.0% | |
!! | TGATGATGATGATGATGGTG+AGG | + | chr3_4:1397298-1397317 | Msa0484150:CDS | 40.0% |
GGGAGGATTTGAGTAAGATT+TGG | + | chr3_4:1397348-1397367 | Msa0484150:CDS | 40.0% | |
GGGAGGATTTGAGTAAGATT+TGG | + | chr3_4:1397348-1397367 | Msa0484150:CDS | 40.0% | |
!! | AGAATGTTCCAATGGGTTAC+TGG | + | chr3_4:1397511-1397530 | Msa0484150:CDS | 40.0% |
!! | TTCTGAGACGAATAATGTGG+AGG | + | chr3_4:1397571-1397590 | Msa0484150:CDS | 40.0% |
ATTTCTTCGGTTCTCCATTC+CGG | - | chr3_4:1397721-1397740 | None:intergenic | 40.0% | |
!! | TGGTCATTCTAAGGTTCACA+AGG | + | chr3_4:1397826-1397845 | Msa0484150:CDS | 40.0% |
!! | GGTCATTCTAAGGTTCACAA+GGG | + | chr3_4:1397827-1397846 | Msa0484150:CDS | 40.0% |
CATGTCAAAGGTTTAGGTGT+TGG | + | chr3_4:1397953-1397972 | Msa0484150:CDS | 40.0% | |
! | AAATGACGGAGAATAAAGGG+GGG | + | chr3_4:1398032-1398051 | Msa0484150:CDS | 40.0% |
TGGTGAGAAGAAGGAATCTA+TGG | + | chr3_4:1398084-1398103 | Msa0484150:CDS | 40.0% | |
GACTAAAATGTTTGTGCCGA+AGG | + | chr3_4:1398120-1398139 | Msa0484150:CDS | 40.0% | |
! | AACTCCTTGCAGAATGCTTT+TGG | + | chr3_4:1398158-1398177 | Msa0484150:CDS | 40.0% |
! | ACTCCTTGCAGAATGCTTTT+GGG | + | chr3_4:1398159-1398178 | Msa0484150:CDS | 40.0% |
GAAGAAGGATTCAGTTGTGT+TGG | + | chr3_4:1398198-1398217 | Msa0484150:CDS | 40.0% | |
TAAATGATGCCAGCGATGAT+CGG | + | chr3_4:1398224-1398243 | Msa0484150:CDS | 40.0% | |
ATCGGCAAGATAGAGATACA+CGG | + | chr3_4:1398242-1398261 | Msa0484150:CDS | 40.0% | |
GATATGGAGCCTTAAAAAGG+TGG | + | chr3_4:1398297-1398316 | Msa0484150:CDS | 40.0% | |
! | GCACTTCTTCCACCTTTTTA+AGG | - | chr3_4:1398309-1398328 | None:intergenic | 40.0% |
AGAATCAGAAGCTGAATCCA+TGG | + | chr3_4:1398390-1398409 | Msa0484150:CDS | 40.0% | |
! | GTGTGTTACTATCTGCAGAT+TGG | + | chr3_4:1398596-1398615 | Msa0484150:intron | 40.0% |
CAAATATGTCTCACAGTTGG+TGG | + | chr3_4:1398733-1398752 | Msa0484150:CDS | 40.0% | |
! | TAGCATTGAATCGCGTATTG+TGG | - | chr3_4:1398852-1398871 | None:intergenic | 40.0% |
! | TGCTAAGTGTTGTCTAACTG+CGG | + | chr3_4:1398867-1398886 | Msa0484150:intron | 40.0% |
TGAATCAGTTTGTCAATCGC+GGG | - | chr3_4:1398941-1398960 | None:intergenic | 40.0% | |
GTGAATCAGTTTGTCAATCG+CGG | - | chr3_4:1398942-1398961 | None:intergenic | 40.0% | |
AGATACTTCTCTACTACTGC+AGG | - | chr3_4:1399169-1399188 | None:intergenic | 40.0% | |
ATGGATAGATTTCCCTCTGA+AGG | + | chr3_4:1399278-1399297 | Msa0484150:CDS | 40.0% | |
!!! | CTTTTTTCCAGAACCTTCAG+AGG | - | chr3_4:1399294-1399313 | None:intergenic | 40.0% |
!! | CTCTGAAGGTTCTGGAAAAA+AGG | + | chr3_4:1399292-1399311 | Msa0484150:CDS | 40.0% |
TCATAATGACGGCACTGTTT+GGG | + | chr3_4:1399400-1399419 | Msa0484150:CDS | 40.0% | |
TATAGTCAACCTTGTCTTCC+CGG | - | chr3_4:1399585-1399604 | None:intergenic | 40.0% | |
CAAGTAAGTAACAAACTCGC+GGG | - | chr3_4:1399665-1399684 | None:intergenic | 40.0% | |
CCAAGTAAGTAACAAACTCG+CGG | - | chr3_4:1399666-1399685 | None:intergenic | 40.0% | |
!! | CGCGAGTTTGTTACTTACTT+GGG | + | chr3_4:1399664-1399683 | Msa0484150:CDS | 40.0% |
GAGTTTAAGAAATGGGACGT+TGG | + | chr3_4:1399692-1399711 | Msa0484150:CDS | 40.0% | |
AGCATCATCATGCTCTTTAC+CGG | - | chr3_4:1399753-1399772 | None:intergenic | 40.0% | |
AATTTGTACGAGAAGCTAGC+CGG | + | chr3_4:1399878-1399897 | Msa0484150:CDS | 40.0% | |
AACATGCAAATGTGGAGAAG+AGG | + | chr3_4:1399933-1399952 | Msa0484150:CDS | 40.0% | |
GTGGAGAAGAGGAAAGAAAA+TGG | + | chr3_4:1399944-1399963 | Msa0484150:CDS | 40.0% | |
TCATCTAGCACTAACAAACC+AGG | - | chr3_4:1399998-1400017 | None:intergenic | 40.0% | |
!! | GGTTTGTTAGTGCTAGATGA+AGG | + | chr3_4:1399998-1400017 | Msa0484150:CDS | 40.0% |
! | GAAAAAGTTTTGCCTGAAGC+AGG | + | chr3_4:1400189-1400208 | Msa0484150:CDS | 40.0% |
AAGCATCTGAAGAATGGAGT+TGG | + | chr3_4:1400221-1400240 | Msa0484150:CDS | 40.0% | |
AGCATCTGAAGAATGGAGTT+GGG | + | chr3_4:1400222-1400241 | Msa0484150:CDS | 40.0% | |
CCCTTTGTTCATGTTCACAA+AGG | + | chr3_4:1400310-1400329 | Msa0484150:CDS | 40.0% | |
AGCTTACAACTTCTTATCCC+CGG | - | chr3_4:1400358-1400377 | None:intergenic | 40.0% | |
!! | TTGTAAGCTGACTTTGAAGC+CGG | + | chr3_4:1400369-1400388 | Msa0484150:CDS | 40.0% |
ATTTGCTTCTGCAAACTGTC+CGG | - | chr3_4:1400391-1400410 | None:intergenic | 40.0% | |
TCACATTCGAGGAAAAGAGA+CGG | - | chr3_4:1400484-1400503 | None:intergenic | 40.0% | |
!! | TCAATCGAAGCTTTTCTAGC+TGG | - | chr3_4:1400543-1400562 | None:intergenic | 40.0% |
!! | AGCATAAGGGACGGATTAAT+TGG | - | chr3_4:1400651-1400670 | None:intergenic | 40.0% |
CACGTCTTTAAACTGGACAA+TGG | + | chr3_4:1400693-1400712 | Msa0484150:CDS | 40.0% | |
CGTCTTTAAACTGGACAATG+GGG | + | chr3_4:1400695-1400714 | Msa0484150:CDS | 40.0% | |
TTTAAACTGGACAATGGGGA+AGG | + | chr3_4:1400699-1400718 | Msa0484150:CDS | 40.0% | |
AAGGAAATCCTCTTCATGCA+TGG | + | chr3_4:1400718-1400737 | Msa0484150:CDS | 40.0% | |
GACAGACAATCCTTAATCCA+TGG | + | chr3_4:1400757-1400776 | Msa0484150:CDS | 40.0% | |
TGTTAGCATCATTGAAGCCA+TGG | - | chr3_4:1400777-1400796 | None:intergenic | 40.0% | |
ATGCAAGGAGAATCTTTGCT+TGG | - | chr3_4:1400801-1400820 | None:intergenic | 40.0% | |
TTGTTCCGAAGGAATTAGCT+TGG | + | chr3_4:1400831-1400850 | Msa0484150:CDS | 40.0% | |
TCCAACCAAGCTAATTCCTT+CGG | - | chr3_4:1400839-1400858 | None:intergenic | 40.0% | |
AGGCTATCAGTAGAGCATAT+AGG | + | chr3_4:1400911-1400930 | Msa0484150:CDS | 40.0% | |
AAAGCACAGGTTATCTGAAC+TGG | + | chr3_4:1401017-1401036 | Msa0484150:CDS | 40.0% | |
AAAGTTAACAGCGCAACTCT+TGG | - | chr3_4:1401076-1401095 | None:intergenic | 40.0% | |
! | GTTTGTTACAGTTCAGTCGA+AGG | + | chr3_4:1401146-1401165 | Msa0484150:CDS | 40.0% |
!! | CGAGATTTGGTTGAGAGTTT+TGG | + | chr3_4:1401171-1401190 | Msa0484150:CDS | 40.0% |
TGTGGTTCCTAAGAATGGTG+AGG | + | chr3_4:1396797-1396816 | Msa0484150:CDS | 45.0% | |
GAAGTACAGACTGAGGAAAG+TGG | + | chr3_4:1396909-1396928 | Msa0484150:CDS | 45.0% | |
! | TGATGATGATGATGAGGAGG+AGG | + | chr3_4:1397160-1397179 | Msa0484150:CDS | 45.0% |
!! | TGATGATGATGATGGTGAGG+AGG | + | chr3_4:1397301-1397320 | Msa0484150:CDS | 45.0% |
!! | TGTTGATGATGATGGTGAGG+AGG | + | chr3_4:1397430-1397449 | Msa0484150:CDS | 45.0% |
!! | TTCCAATGGGTTACTGGAGA+TGG | + | chr3_4:1397517-1397536 | Msa0484150:CDS | 45.0% |
GAAGAAGAACAACCCTTCAC+TGG | - | chr3_4:1397695-1397714 | None:intergenic | 45.0% | |
TTTCTTCGGTTCTCCATTCC+GGG | - | chr3_4:1397720-1397739 | None:intergenic | 45.0% | |
!! | GTCAAAGGTTTAGGTGTTGG+AGG | + | chr3_4:1397956-1397975 | Msa0484150:CDS | 45.0% |
! | AATGACGGAGAATAAAGGGG+GGG | + | chr3_4:1398033-1398052 | Msa0484150:CDS | 45.0% |
! | GGCAGATTTAGGATCCGTAA+TGG | + | chr3_4:1398064-1398083 | Msa0484150:CDS | 45.0% |
GATCCGTAATGGTGAGAAGA+AGG | + | chr3_4:1398075-1398094 | Msa0484150:CDS | 45.0% | |
TTAGCTAAACGCAGCTCCTT+CGG | - | chr3_4:1398139-1398158 | None:intergenic | 45.0% | |
! | CTCCTTGCAGAATGCTTTTG+GGG | + | chr3_4:1398160-1398179 | Msa0484150:CDS | 45.0% |
GAAGGATTCAGTTGTGTTGG+AGG | + | chr3_4:1398201-1398220 | Msa0484150:CDS | 45.0% | |
TTGAGACACCTCCACAGATA+TGG | + | chr3_4:1398281-1398300 | Msa0484150:CDS | 45.0% | |
TTAAGGCTCCATATCTGTGG+AGG | - | chr3_4:1398292-1398311 | None:intergenic | 45.0% | |
! | GGAAGAAGTGCAAAAGACCA+AGG | + | chr3_4:1398318-1398337 | Msa0484150:CDS | 45.0% |
! | AGAAGTGCAAAAGACCAAGG+AGG | + | chr3_4:1398321-1398340 | Msa0484150:CDS | 45.0% |
GGAACCATTGTGGGATCAAA+TGG | + | chr3_4:1398354-1398373 | Msa0484150:CDS | 45.0% | |
TCGTGTTCACAAAGAGTGGA+TGG | - | chr3_4:1398650-1398669 | None:intergenic | 45.0% | |
AGTGTCGTGTTCACAAAGAG+TGG | - | chr3_4:1398654-1398673 | None:intergenic | 45.0% | |
ACTCGTTTCGACGATCAGAT+TGG | + | chr3_4:1398671-1398690 | Msa0484150:CDS | 45.0% | |
GGTGTATATTGCAGATGGTG+CGG | + | chr3_4:1398692-1398711 | Msa0484150:CDS | 45.0% | |
CGCGTATTGTGGAACAATAG+CGG | - | chr3_4:1398841-1398860 | None:intergenic | 45.0% | |
TTGTCTAACTGCGGCTAAAG+CGG | + | chr3_4:1398876-1398895 | Msa0484150:intron | 45.0% | |
! | AGATTTCCCTCTGAAGGTTC+TGG | + | chr3_4:1399284-1399303 | Msa0484150:CDS | 45.0% |
CTCATAATGACGGCACTGTT+TGG | + | chr3_4:1399399-1399418 | Msa0484150:CDS | 45.0% | |
!! | CCGCGAGTTTGTTACTTACT+TGG | + | chr3_4:1399663-1399682 | Msa0484150:CDS | 45.0% |
GTCTAATAAGCGGCTGAGTA+AGG | + | chr3_4:1399790-1399809 | Msa0484150:CDS | 45.0% | |
GGCTGAGTAAGGATACAACA+CGG | + | chr3_4:1399801-1399820 | Msa0484150:CDS | 45.0% | |
GAGTAAGGATACAACACGGA+TGG | + | chr3_4:1399805-1399824 | Msa0484150:CDS | 45.0% | |
! | GGATGGTGAAACTGATTTCG+TGG | + | chr3_4:1399822-1399841 | Msa0484150:CDS | 45.0% |
CGAAAATTCAAACCCGCAAG+CGG | + | chr3_4:1400065-1400084 | Msa0484150:CDS | 45.0% | |
TCTGGAAAGGAGTTCCAGAA+AGG | - | chr3_4:1400096-1400115 | None:intergenic | 45.0% | |
GGTATCGTGTTAGGAAACGA+AGG | - | chr3_4:1400160-1400179 | None:intergenic | 45.0% | |
TGGGAAGCCGATATTTCAAC+AGG | + | chr3_4:1400241-1400260 | Msa0484150:CDS | 45.0% | |
GATCCTTCAAAAGAAGCTCC+CGG | + | chr3_4:1400336-1400355 | Msa0484150:CDS | 45.0% | |
ATCCTTCAAAAGAAGCTCCC+GGG | + | chr3_4:1400337-1400356 | Msa0484150:CDS | 45.0% | |
GCTTACAACTTCTTATCCCC+GGG | - | chr3_4:1400357-1400376 | None:intergenic | 45.0% | |
ATTCGAGGAAAAGAGACGGA+TGG | - | chr3_4:1400480-1400499 | None:intergenic | 45.0% | |
AGAGGAATCTGTTGTCGACA+AGG | + | chr3_4:1400516-1400535 | Msa0484150:CDS | 45.0% | |
AATCCTCTTCATGCATGGAG+AGG | + | chr3_4:1400723-1400742 | Msa0484150:CDS | 45.0% | |
AACAAGCATTCGTCGATGCA+AGG | - | chr3_4:1400816-1400835 | None:intergenic | 45.0% | |
! | TCCGAAGGAATTAGCTTGGT+TGG | + | chr3_4:1400835-1400854 | Msa0484150:CDS | 45.0% |
ACTTACCATCTGCTCACTGA+AGG | + | chr3_4:1400958-1400977 | Msa0484150:CDS | 45.0% | |
CTTACCATCTGCTCACTGAA+GGG | + | chr3_4:1400959-1400978 | Msa0484150:CDS | 45.0% | |
GTACAGACTGAGGAAAGTGG+AGG | + | chr3_4:1396912-1396931 | Msa0484150:CDS | 50.0% | |
! | TGATGATGATGAGGAGGAGG+AGG | + | chr3_4:1397163-1397182 | Msa0484150:CDS | 50.0% |
!! | TGATGATGATGGTGAGGAGG+AGG | + | chr3_4:1397304-1397323 | Msa0484150:CDS | 50.0% |
TGAAGGAGGAGGAGGACAAT+GGG | + | chr3_4:1397327-1397346 | Msa0484150:CDS | 50.0% | |
!! | TTCCAATGGGTTAGCGAGAG+AGG | + | chr3_4:1397379-1397398 | Msa0484150:CDS | 50.0% |
!! | TGATGATGATGGTGAGGAGG+AGG | + | chr3_4:1397304-1397323 | Msa0484150:CDS | 50.0% |
CACCATCTCCAGTAACCCAT+TGG | - | chr3_4:1397522-1397541 | None:intergenic | 50.0% | |
ACTGGAGATGGTGAGAGAAG+TGG | + | chr3_4:1397529-1397548 | Msa0484150:CDS | 50.0% | |
AGGGTTGTTCTTCTTCCACC+CGG | + | chr3_4:1397699-1397718 | Msa0484150:CDS | 50.0% | |
TGTTCTTCTTCCACCCGGAA+TGG | + | chr3_4:1397704-1397723 | Msa0484150:CDS | 50.0% | |
!! | TGCCCCAAAAGCATTCTGCA+AGG | - | chr3_4:1398165-1398184 | None:intergenic | 50.0% |
TCTATCTTGCCGATCATCGC+TGG | - | chr3_4:1398236-1398255 | None:intergenic | 50.0% | |
!! | GGAGGTGTCTCAACACAAAC+CGG | - | chr3_4:1398274-1398293 | None:intergenic | 50.0% |
AGTGCAAAAGACCAAGGAGG+AGG | + | chr3_4:1398324-1398343 | Msa0484150:CDS | 50.0% | |
AGGAGGAACAGGAACCATTG+TGG | + | chr3_4:1398344-1398363 | Msa0484150:CDS | 50.0% | |
GGAGGAACAGGAACCATTGT+GGG | + | chr3_4:1398345-1398364 | Msa0484150:CDS | 50.0% | |
ATATTGCAGATGGTGCGGTG+TGG | + | chr3_4:1398697-1398716 | Msa0484150:CDS | 50.0% | |
TGCATTATCTCCCATGCTCC+CGG | + | chr3_4:1399557-1399576 | Msa0484150:CDS | 50.0% | |
AGAAAGGATGATCCGCTTGC+GGG | - | chr3_4:1400080-1400099 | None:intergenic | 50.0% | |
CAGAAAGGATGATCCGCTTG+CGG | - | chr3_4:1400081-1400100 | None:intergenic | 50.0% | |
AGCTCATGCGGTATCGTGTT+AGG | - | chr3_4:1400169-1400188 | None:intergenic | 50.0% | |
TCCTTCAAAAGAAGCTCCCG+GGG | + | chr3_4:1400338-1400357 | Msa0484150:CDS | 50.0% | |
CAACCTCTCCATGCATGAAG+AGG | - | chr3_4:1400729-1400748 | None:intergenic | 50.0% | |
CTCTTCATGCATGGAGAGGT+TGG | + | chr3_4:1400727-1400746 | Msa0484150:CDS | 50.0% | |
TCGACGAATGCTTGTTCCGA+AGG | + | chr3_4:1400820-1400839 | Msa0484150:CDS | 50.0% | |
GAATCCATCAGTCGATCGAC+AGG | + | chr3_4:1400891-1400910 | Msa0484150:CDS | 50.0% | |
ATAGCCTGTCGATCGACTGA+TGG | - | chr3_4:1400898-1400917 | None:intergenic | 50.0% | |
TCAGTCGAAGGAGCGAGATT+TGG | + | chr3_4:1401158-1401177 | Msa0484150:CDS | 50.0% | |
CAGACTGAGGAAAGTGGAGG+AGG | + | chr3_4:1396915-1396934 | Msa0484150:CDS | 55.0% | |
! | TGATGATGAGGAGGAGGAGG+AGG | + | chr3_4:1397166-1397185 | Msa0484150:CDS | 55.0% |
GGTGGAGGAGTTAGTGAGAG+AGG | + | chr3_4:1397244-1397263 | Msa0484150:CDS | 55.0% | |
! | TGATGGTGAGGAGGAGGTGA+AGG | + | chr3_4:1397310-1397329 | Msa0484150:CDS | 55.0% |
GTGAAGGAGGAGGAGGACAA+TGG | + | chr3_4:1397326-1397345 | Msa0484150:CDS | 55.0% | |
GAAGGAGGAGGAGGACAATG+GGG | + | chr3_4:1397328-1397347 | Msa0484150:CDS | 55.0% | |
!! | TGATGATGGTGAGGAGGAGG+AGG | + | chr3_4:1397307-1397326 | Msa0484150:CDS | 55.0% |
AGGAGGAGGAGGAGGTCAAA+GGG | + | chr3_4:1397465-1397484 | Msa0484150:CDS | 55.0% | |
GGAGATGGTGAGAGAAGTGG+AGG | + | chr3_4:1397532-1397551 | Msa0484150:CDS | 55.0% | |
TAGAGATACACGGTCACCGC+CGG | + | chr3_4:1398252-1398271 | Msa0484150:CDS | 55.0% | |
GGTGTCTCAACACAAACCGG+CGG | - | chr3_4:1398271-1398290 | None:intergenic | 55.0% | |
GCAAAAGACCAAGGAGGAGG+AGG | + | chr3_4:1398327-1398346 | Msa0484150:CDS | 55.0% | |
TTCCTGTTCCTCCTCCTCCT+TGG | - | chr3_4:1398338-1398357 | None:intergenic | 55.0% | |
TCTAACTGCGGCTAAAGCGG+AGG | + | chr3_4:1398879-1398898 | Msa0484150:intron | 55.0% | |
AACCTTGTCTTCCCGGTTCC+GGG | - | chr3_4:1399578-1399597 | None:intergenic | 55.0% | |
CAACCTTGTCTTCCCGGTTC+CGG | - | chr3_4:1399579-1399598 | None:intergenic | 55.0% | |
CTCGCGGGAGCAACAATAAC+TGG | - | chr3_4:1399650-1399669 | None:intergenic | 55.0% | |
TACGAGAAGCTAGCCGGAGA+AGG | + | chr3_4:1399884-1399903 | Msa0484150:CDS | 55.0% | |
ACGAGAAGCTAGCCGGAGAA+GGG | + | chr3_4:1399885-1399904 | Msa0484150:CDS | 55.0% | |
GCGTCTAGATCTCCCTTCTC+CGG | - | chr3_4:1399900-1399919 | None:intergenic | 55.0% | |
GAGAAGGGAGATCTAGACGC+AGG | + | chr3_4:1399900-1399919 | Msa0484150:CDS | 55.0% | |
CGCAAGCGGATCATCCTTTC+TGG | + | chr3_4:1400079-1400098 | Msa0484150:CDS | 55.0% | |
! | TCCCCGGGAGCTTCTTTTGA+AGG | - | chr3_4:1400342-1400361 | None:intergenic | 55.0% |
CAGTCCCTTCAGTGAGCAGA+TGG | - | chr3_4:1400966-1400985 | None:intergenic | 55.0% | |
! | GCAAACAGGCCGAAAAGCAC+AGG | + | chr3_4:1401004-1401023 | Msa0484150:CDS | 55.0% |
TGATGAGGAGGAGGAGGAGG+AGG | + | chr3_4:1397169-1397188 | Msa0484150:CDS | 60.0% | |
GGAGGAGGAGGAAGAGGATG+AGG | + | chr3_4:1397184-1397203 | Msa0484150:CDS | 60.0% | |
TGGTGAGGAGGAGGTGAAGG+AGG | + | chr3_4:1397313-1397332 | Msa0484150:CDS | 60.0% | |
TGAGGAGGAGGTGAAGGAGG+AGG | + | chr3_4:1397316-1397335 | Msa0484150:CDS | 60.0% | |
CGCCTCTCTCGCTAACCCAT+TGG | - | chr3_4:1397384-1397403 | None:intergenic | 60.0% | |
! | TGATGGTGAGGAGGAGGAGG+AGG | + | chr3_4:1397439-1397458 | Msa0484150:CDS | 60.0% |
GAGGAGGAGGAGGAGGTCAA+AGG | + | chr3_4:1397464-1397483 | Msa0484150:CDS | 60.0% | |
GGAGGAGGAGGAGGTCAAAG+GGG | + | chr3_4:1397466-1397485 | Msa0484150:CDS | 60.0% | |
CTTCGGTTCTCCATTCCGGG+TGG | - | chr3_4:1397717-1397736 | None:intergenic | 60.0% | |
GACCAAGGAGGAGGAGGAAC+AGG | + | chr3_4:1398333-1398352 | Msa0484150:CDS | 60.0% | |
TGAGTAAAACCGGTCCGCGC+AGG | + | chr3_4:1399525-1399544 | Msa0484150:CDS | 60.0% | |
GAGTAAAACCGGTCCGCGCA+GGG | + | chr3_4:1399526-1399545 | Msa0484150:CDS | 60.0% | |
ATCTCCCATGCTCCCGGAAC+CGG | + | chr3_4:1399563-1399582 | Msa0484150:CDS | 60.0% | |
TGAGGAGGAGGAGGAGGAGG+AGG | + | chr3_4:1397172-1397191 | Msa0484150:CDS | 65.0% | |
GGAGGAGGAGGAGGAGGAAG+AGG | + | chr3_4:1397178-1397197 | Msa0484150:CDS | 65.0% | |
GGAGGAGGTGAAGGAGGAGG+AGG | + | chr3_4:1397319-1397338 | Msa0484150:CDS | 65.0% | |
GGAGGAGGAGGACAATGGGG+AGG | + | chr3_4:1397331-1397350 | Msa0484150:CDS | 65.0% | |
TGGTGAGGAGGAGGAGGAGG+AGG | + | chr3_4:1397442-1397461 | Msa0484150:CDS | 65.0% | |
TGAGGAGGAGGAGGAGGAGG+AGG | + | chr3_4:1397172-1397191 | Msa0484150:CDS | 65.0% | |
GGAGGAGGAGGTCAAAGGGG+AGG | + | chr3_4:1397469-1397488 | Msa0484150:CDS | 65.0% | |
TAAAACCGGTCCGCGCAGGG+AGG | + | chr3_4:1399529-1399548 | Msa0484150:CDS | 65.0% | |
AAAACCGGTCCGCGCAGGGA+GGG | + | chr3_4:1399530-1399549 | Msa0484150:CDS | 65.0% | |
TCTCCCATGCTCCCGGAACC+GGG | + | chr3_4:1399564-1399583 | Msa0484150:CDS | 65.0% | |
! | CTTCCCGGTTCCGGGAGCAT+GGG | - | chr3_4:1399570-1399589 | None:intergenic | 65.0% |
TCTTCCCGGTTCCGGGAGCA+TGG | - | chr3_4:1399571-1399590 | None:intergenic | 65.0% | |
CTCCCGGAACCGGGAAGACA+AGG | + | chr3_4:1399573-1399592 | Msa0484150:CDS | 65.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | + | chr3_4:1397175-1397194 | Msa0484150:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | + | chr3_4:1397175-1397194 | Msa0484150:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | + | chr3_4:1397175-1397194 | Msa0484150:CDS | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | + | chr3_4:1397175-1397194 | Msa0484150:CDS | 70.0% | |
ATGCAGCCACCCTCCCTGCG+CGG | - | chr3_4:1399542-1399561 | None:intergenic | 70.0% | |
! | ACCGGTCCGCGCAGGGAGGG+TGG | + | chr3_4:1399533-1399552 | Msa0484150:CDS | 80.0% |
! | GCCACCCTCCCTGCGCGGAC+CGG | - | chr3_4:1399537-1399556 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 1396447 | 1401200 | 1396447 | ID=Msa0484150;Name=Msa0484150 |
chr3_4 | mRNA | 1396447 | 1401200 | 1396447 | ID=Msa0484150-mRNA-1;Parent=Msa0484150;Name=Msa0484150-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0|1|1|1|3|0|1342 |
chr3_4 | exon | 1396447 | 1398411 | 1396447 | ID=Msa0484150-mRNA-1:exon:378;Parent=Msa0484150-mRNA-1 |
chr3_4 | exon | 1398614 | 1398754 | 1398614 | ID=Msa0484150-mRNA-1:exon:379;Parent=Msa0484150-mRNA-1 |
chr3_4 | exon | 1399278 | 1401200 | 1399278 | ID=Msa0484150-mRNA-1:exon:380;Parent=Msa0484150-mRNA-1 |
chr3_4 | CDS | 1396447 | 1398411 | 1396447 | ID=Msa0484150-mRNA-1:cds;Parent=Msa0484150-mRNA-1 |
chr3_4 | CDS | 1398614 | 1398754 | 1398614 | ID=Msa0484150-mRNA-1:cds;Parent=Msa0484150-mRNA-1 |
chr3_4 | CDS | 1399278 | 1401200 | 1399278 | ID=Msa0484150-mRNA-1:cds;Parent=Msa0484150-mRNA-1 |
Gene Sequence |
Protein sequence |