Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504090 | XP_013460123.1 | 98.694 | 842 | 9 | 1 | 1 | 842 | 1 | 840 | 0.0 | 1725 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504090 | sp|P53537|PHSH_VICFA | 94.418 | 842 | 47 | 0 | 1 | 842 | 1 | 842 | 0.0 | 1660 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504090 | A0A072UWD1 | 98.694 | 842 | 9 | 1 | 1 | 842 | 1 | 840 | 0.0 | 1725 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035290 | Msa0504090 | 0.826627 | 2.445487e-54 | -8.615850e-47 |
| Msa0044180 | Msa0504090 | 0.819959 | 8.832598e-53 | -8.615850e-47 |
| Msa0090860 | Msa0504090 | 0.805293 | 1.431691e-49 | -8.615850e-47 |
| Msa0154270 | Msa0504090 | 0.820008 | 8.606800e-53 | -8.615850e-47 |
| Msa0176040 | Msa0504090 | 0.800705 | 1.271558e-48 | -8.615850e-47 |
| Msa0197030 | Msa0504090 | 0.805534 | 1.274410e-49 | -8.615850e-47 |
| Msa0364780 | Msa0504090 | 0.997775 | 5.994301e-249 | -8.615850e-47 |
| Msa0379100 | Msa0504090 | 0.821208 | 4.561794e-53 | -8.615850e-47 |
| Msa0412190 | Msa0504090 | 0.893514 | 5.855097e-75 | -8.615850e-47 |
| Msa0412250 | Msa0504090 | 0.975977 | 5.936198e-141 | -8.615850e-47 |
| Msa0428730 | Msa0504090 | 0.819054 | 1.420639e-52 | -8.615850e-47 |
| Msa0456760 | Msa0504090 | 0.993839 | 1.335831e-202 | -8.615850e-47 |
| Msa0475090 | Msa0504090 | 0.804136 | 2.497130e-49 | -8.615850e-47 |
| Msa0276590 | Msa0504090 | 0.812433 | 4.250862e-51 | -8.615850e-47 |
| Msa0504090 | Msa0570680 | 0.803567 | 3.277186e-49 | -8.615850e-47 |
| Msa0504090 | Msa0928940 | 0.814400 | 1.570985e-51 | -8.615850e-47 |
| Msa0504090 | Msa1031150 | 0.827141 | 1.842711e-54 | -8.615850e-47 |
| Msa0504090 | Msa1070250 | 0.820652 | 6.124399e-53 | -8.615850e-47 |
| Msa0504090 | Msa1071640 | 0.848992 | 4.302197e-60 | -8.615850e-47 |
| Msa0504090 | Msa1117510 | 0.806653 | 7.409166e-50 | -8.615850e-47 |
| Msa0504090 | Msa1119570 | 0.839479 | 1.545977e-57 | -8.615850e-47 |
| Msa0504090 | Msa1137940 | 0.847414 | 1.174309e-59 | -8.615850e-47 |
| Msa0504090 | Msa1158090 | 0.862197 | 6.011520e-64 | -8.615850e-47 |
| Msa0504090 | Msa1161210 | 0.832988 | 6.901276e-56 | -8.615850e-47 |
| Msa0504090 | Msa1180050 | 0.871459 | 6.723168e-67 | -8.615850e-47 |
| Msa0504090 | Msa1198720 | 0.835830 | 1.335449e-56 | -8.615850e-47 |
| Msa0504090 | Msa1232270 | 0.840613 | 7.824538e-58 | -8.615850e-47 |
| Msa0504090 | Msa1252300 | 0.851455 | 8.779388e-61 | -8.615850e-47 |
| Msa0504090 | Msa1270770 | 0.871204 | 8.167341e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504090 | MtrunA17_Chr3g0103771 | 98.694 | 842 | 9 | 1 | 1 | 842 | 1 | 840 | 0.0 | 1725 |
| Msa0504090 | MtrunA17_Chr2g0282731 | 48.783 | 822 | 403 | 10 | 26 | 842 | 180 | 988 | 0.0 | 810 |
| Msa0504090 | MtrunA17_Chr6g0454411 | 66.169 | 402 | 135 | 1 | 442 | 842 | 576 | 977 | 0.0 | 580 |
| Msa0504090 | MtrunA17_Chr6g0454411 | 62.019 | 416 | 152 | 3 | 26 | 436 | 90 | 504 | 4.54e-177 | 536 |
| Msa0504090 | MtrunA17_Chr4g0043041 | 65.931 | 408 | 137 | 2 | 437 | 842 | 574 | 981 | 0.0 | 578 |
| Msa0504090 | MtrunA17_Chr4g0043041 | 58.491 | 424 | 171 | 2 | 18 | 436 | 71 | 494 | 6.42e-173 | 525 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504090 | AT3G46970.1 | 82.915 | 837 | 141 | 1 | 8 | 842 | 5 | 841 | 0.0 | 1470 |
| Msa0504090 | AT3G29320.1 | 60.274 | 876 | 291 | 6 | 24 | 842 | 87 | 962 | 0.0 | 1097 |
Find 237 sgRNAs with CRISPR-Local
Find 468 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGCTTGCTTCTTGCTTTC+TGG | 0.078572 | 3_4:-48024242 | Msa0504090:CDS |
| TCAATATATCACTGTGTAAT+TGG | 0.122849 | 3_4:+48022292 | None:intergenic |
| CTCAGTATGCTAAGGAAATT+TGG | 0.156164 | 3_4:-48019118 | Msa0504090:CDS |
| TTAACCACTTAGTGATTATT+TGG | 0.195969 | 3_4:+48022160 | None:intergenic |
| AAGAGGCAAAGAAGTTTATT+AGG | 0.200703 | 3_4:-48019850 | Msa0504090:CDS |
| ACTTTCCAACATGCGCATTT+TGG | 0.216640 | 3_4:-48022612 | Msa0504090:CDS |
| CCATCCGAACAACTGGCTTC+TGG | 0.226210 | 3_4:+48022579 | None:intergenic |
| GCCACCGATACATTGTAATT+TGG | 0.237509 | 3_4:+48020824 | None:intergenic |
| TTGAATGGGTGCCTTATTAT+AGG | 0.250074 | 3_4:-48020713 | Msa0504090:CDS |
| GACCATTTCTCCAGTGCTTC+GGG | 0.261697 | 3_4:+48022834 | None:intergenic |
| AACACTTAATTTACCTGCTT+GGG | 0.262521 | 3_4:-48024209 | Msa0504090:CDS |
| TGAATGTCAAATAGAGTATC+AGG | 0.269003 | 3_4:+48021896 | None:intergenic |
| GATTCATTGGAAGGAAATTC+TGG | 0.270874 | 3_4:-48019788 | Msa0504090:CDS |
| GTCCATTACAAATACCAATT+TGG | 0.272735 | 3_4:+48018856 | None:intergenic |
| TTGCAAATTATGTTTCAATA+TGG | 0.291770 | 3_4:-48022257 | Msa0504090:CDS |
| CAACCCATTGCTTGATTCAT+TGG | 0.306445 | 3_4:-48019801 | Msa0504090:CDS |
| TTTACACTTACCTTCCATTA+GGG | 0.309550 | 3_4:+48023933 | None:intergenic |
| ATTTGCTTAGCCTTCCAAAT+TGG | 0.310648 | 3_4:-48018870 | Msa0504090:three_prime_UTR |
| ATTTACACTTACCTTCCATT+AGG | 0.314637 | 3_4:+48023932 | None:intergenic |
| AGAGTTGATGCGTTTACTTA+TGG | 0.314885 | 3_4:-48023071 | Msa0504090:CDS |
| GTGTGTATGCCAGCCGAAAA+TGG | 0.331791 | 3_4:-48023815 | Msa0504090:intron |
| CATCTAAAGTACCTATAATA+AGG | 0.332291 | 3_4:+48020702 | None:intergenic |
| GCTTATGATGTGCCAATTCC+TGG | 0.336675 | 3_4:-48023765 | Msa0504090:CDS |
| GCGAAGACTGATGGTGTTCT+TGG | 0.337746 | 3_4:+48023734 | None:intergenic |
| CCTGCCTCCTCTCCTTGAAC+CGG | 0.339166 | 3_4:+48023170 | None:intergenic |
| ATCACCATTAGTCTCTTCTA+TGG | 0.342780 | 3_4:+48025674 | None:intergenic |
| GTGTTCTTGGTTTGGTATCC+AGG | 0.343283 | 3_4:+48023747 | None:intergenic |
| ATGGAGCTAATGTGGAAATC+AGG | 0.343321 | 3_4:-48020682 | Msa0504090:CDS |
| GCATCAACTCTGGTATTGAT+AGG | 0.348225 | 3_4:+48023083 | None:intergenic |
| TTGGAAGGAAATTCTGGTTA+TGG | 0.355039 | 3_4:-48019782 | Msa0504090:CDS |
| TTGGTTTGGTATCCAGGAAT+TGG | 0.357731 | 3_4:+48023753 | None:intergenic |
| TTGTACCCTATCAGATTCTT+TGG | 0.358703 | 3_4:-48023971 | Msa0504090:CDS |
| CATCCGAACAACTGGCTTCT+GGG | 0.363739 | 3_4:+48022580 | None:intergenic |
| AGACCATTTCTCCAGTGCTT+CGG | 0.373578 | 3_4:+48022833 | None:intergenic |
| AACATGAAATTTGCTTTGAA+TGG | 0.374053 | 3_4:-48020728 | Msa0504090:CDS |
| TTCCAAATTGGTATTTGTAA+TGG | 0.376585 | 3_4:-48018858 | Msa0504090:three_prime_UTR |
| TTTATTAGGAGTGGGGTGTT+TGG | 0.376904 | 3_4:-48019836 | Msa0504090:CDS |
| GCCTCTTCAAATCGAGGATC+CGG | 0.386133 | 3_4:+48019866 | None:intergenic |
| GCAAAGAAGTTTATTAGGAG+TGG | 0.386572 | 3_4:-48019845 | Msa0504090:CDS |
| CAACACTTAATTTACCTGCT+TGG | 0.390154 | 3_4:-48024210 | Msa0504090:CDS |
| AAATTTGCCATCCGAACAAC+TGG | 0.392112 | 3_4:+48022572 | None:intergenic |
| ATGTCTATCTTAAGTACTGC+TGG | 0.395817 | 3_4:-48019173 | Msa0504090:CDS |
| CGTGGTGATTACTTTCTTGT+TGG | 0.397265 | 3_4:-48019758 | Msa0504090:CDS |
| ACACCATCAGTCTTCGCCTC+TGG | 0.401475 | 3_4:-48023728 | Msa0504090:CDS |
| GCTTCACTCACGAGCTCAAC+AGG | 0.402172 | 3_4:-48023634 | Msa0504090:intron |
| CTTATTATAGGTACTTTAGA+TGG | 0.405360 | 3_4:-48020701 | Msa0504090:CDS |
| CGAGCCTTGACCAATGCTAT+TGG | 0.405477 | 3_4:-48024578 | Msa0504090:CDS |
| TTCTTGCTTTCTGGATTCCA+TGG | 0.411344 | 3_4:-48024233 | Msa0504090:CDS |
| CGACTTACACAAATGCTAAA+CGG | 0.415136 | 3_4:-48021111 | Msa0504090:CDS |
| GACTGATGGTGTTCTTGGTT+TGG | 0.418565 | 3_4:+48023739 | None:intergenic |
| TGTTGGGATAGCTCACTTCC+TGG | 0.419593 | 3_4:+48020788 | None:intergenic |
| TCCTGAGCATCCACGTAGCT+TGG | 0.420103 | 3_4:+48019725 | None:intergenic |
| TCCCCGAAGCACTGGAGAAA+TGG | 0.420397 | 3_4:-48022836 | Msa0504090:CDS |
| CCACCTTCTGTGGCATCCCC+AGG | 0.425804 | 3_4:+48023351 | None:intergenic |
| ACCTGGCCAAAGAATCTGAT+AGG | 0.427402 | 3_4:+48023965 | None:intergenic |
| TGTTCGTGATCGTCTCGTTC+AGG | 0.427671 | 3_4:-48025490 | Msa0504090:intron |
| CAATATATCACTGTGTAATT+GGG | 0.428524 | 3_4:+48022293 | None:intergenic |
| CACTGTCCTCCCCGAAGCAC+TGG | 0.430389 | 3_4:-48022844 | Msa0504090:CDS |
| GATAAGTAGTAAGTTTGCTT+GGG | 0.432852 | 3_4:+48024620 | None:intergenic |
| TGATAAGTAGTAAGTTTGCT+TGG | 0.439266 | 3_4:+48024619 | None:intergenic |
| CAAAGAAGTTTATTAGGAGT+GGG | 0.443416 | 3_4:-48019844 | Msa0504090:CDS |
| GGACATCATTTCCCGGTTCA+AGG | 0.446314 | 3_4:-48023182 | Msa0504090:CDS |
| AAGTTCCAAAATAAAACTAA+TGG | 0.448080 | 3_4:-48022228 | Msa0504090:CDS |
| GTGATTATTTGGCTTAGCTC+AGG | 0.450262 | 3_4:+48022171 | None:intergenic |
| AATTACAGGACATCATTTCC+CGG | 0.450355 | 3_4:-48023189 | Msa0504090:intron |
| GATGTATCCAGCTGAAATTA+TGG | 0.450675 | 3_4:+48019074 | None:intergenic |
| GCTGATGCTTTGCGCAAGTT+CGG | 0.450707 | 3_4:-48024530 | Msa0504090:CDS |
| ATGTTAGAAGCAATCTCATC+AGG | 0.454704 | 3_4:+48025594 | None:intergenic |
| TTATCAATGGAGTTCCTTCA+AGG | 0.457142 | 3_4:-48024602 | Msa0504090:CDS |
| AGGAGGAAGTTGCTGAGGAC+TGG | 0.459433 | 3_4:-48024129 | Msa0504090:CDS |
| CCTGAGCATCCACGTAGCTT+GGG | 0.460185 | 3_4:+48019726 | None:intergenic |
| CTTCCAATGAATCAAGCAAT+GGG | 0.462569 | 3_4:+48019798 | None:intergenic |
| CACCATCAGTCTTCGCCTCT+GGG | 0.463304 | 3_4:-48023727 | Msa0504090:CDS |
| ACTGCACGCACTGTCATGAT+TGG | 0.464857 | 3_4:-48021148 | Msa0504090:CDS |
| CTTATGGATGAAGAAGGGCT+TGG | 0.467886 | 3_4:-48023055 | Msa0504090:CDS |
| AGGAGAGGAGGCAGGGACCT+TGG | 0.468311 | 3_4:-48023162 | Msa0504090:CDS |
| CCGGTTCAAGGAGAGGAGGC+AGG | 0.470005 | 3_4:-48023170 | Msa0504090:CDS |
| GCACTAGGAAATGGTGGTCT+TGG | 0.471328 | 3_4:-48024265 | Msa0504090:CDS |
| CCATTGCTTGATTCATTGGA+AGG | 0.471435 | 3_4:-48019797 | Msa0504090:CDS |
| GCCTGCGGTACTAATATGTT+GGG | 0.473266 | 3_4:+48020772 | None:intergenic |
| ATAGCATTTAAACTTTCTGA+TGG | 0.474816 | 3_4:+48018798 | None:intergenic |
| TGGTCAAGGCTCGACCTTGA+AGG | 0.476017 | 3_4:+48024588 | None:intergenic |
| CCCAAGCTACGTGGATGCTC+AGG | 0.476610 | 3_4:-48019726 | Msa0504090:CDS |
| ATTCAAATTTCCAATAGCAT+TGG | 0.479715 | 3_4:+48024568 | None:intergenic |
| GCCAATGGATTTGCAACAGC+AGG | 0.481609 | 3_4:+48025624 | None:intergenic |
| CCTTCCAATGAATCAAGCAA+TGG | 0.482739 | 3_4:+48019797 | None:intergenic |
| CGTGAAGATATTTGAAGGAA+TGG | 0.483563 | 3_4:+48026172 | None:intergenic |
| ACATGAAATTTGCTTTGAAT+GGG | 0.484003 | 3_4:-48020727 | Msa0504090:CDS |
| CCCTATCAGATTCTTTGGCC+AGG | 0.486248 | 3_4:-48023966 | Msa0504090:CDS |
| ATCCCCAGAAGCCAGTTGTT+CGG | 0.488192 | 3_4:-48022583 | Msa0504090:CDS |
| CGTTTACTTATGGATGAAGA+AGG | 0.488789 | 3_4:-48023061 | Msa0504090:CDS |
| TGTGGTCAATAGCTACTTGA+AGG | 0.489084 | 3_4:-48021041 | Msa0504090:intron |
| GGCTTGGATGGGATGAAGCA+TGG | 0.489941 | 3_4:-48023039 | Msa0504090:CDS |
| CAGGTCGAGGTTAACCCTAA+TGG | 0.489967 | 3_4:-48023947 | Msa0504090:CDS |
| TTGTGATTTGAAGTTCAAAC+CGG | 0.490504 | 3_4:-48019885 | Msa0504090:intron |
| GGAGGCAGGGACCTTGGAAC+TGG | 0.491790 | 3_4:-48023156 | Msa0504090:CDS |
| AGAGTGGTCGTCTGCAAAGA+TGG | 0.498113 | 3_4:-48021975 | Msa0504090:CDS |
| TTCACTCTCAAGATCCAGTC+GGG | 0.498449 | 3_4:+48022634 | None:intergenic |
| GAAGGAAAGAGAGGATGGAC+TGG | 0.498810 | 3_4:-48020594 | Msa0504090:intron |
| CAAACAGAAGTTTAGCCCTT+GGG | 0.500543 | 3_4:-48024014 | Msa0504090:intron |
| TGCCTGCGGTACTAATATGT+TGG | 0.500593 | 3_4:+48020771 | None:intergenic |
| CAGTACGTTCTGAAGGTGAC+AGG | 0.500818 | 3_4:-48021932 | Msa0504090:CDS |
| CCAAACAGAAGTTTAGCCCT+TGG | 0.504145 | 3_4:-48024015 | Msa0504090:intron |
| TGGATGAAGAAGGGCTTGGA+TGG | 0.504963 | 3_4:-48023051 | Msa0504090:CDS |
| GTGGCGGAGGTGCTTATCCC+AGG | 0.507556 | 3_4:-48020806 | Msa0504090:CDS |
| AGCAACCTTCGTCGGAAACT+CGG | 0.508546 | 3_4:+48023132 | None:intergenic |
| GCAAACTTACTACTTATCAA+TGG | 0.509704 | 3_4:-48024615 | Msa0504090:CDS |
| GATAATCGCAAAAGAAGGTC+AGG | 0.510735 | 3_4:-48024149 | Msa0504090:CDS |
| CCGTGTACCATAATTTCAGC+TGG | 0.513087 | 3_4:-48019081 | Msa0504090:exon |
| CAGATTCTTTGGCCAGGTCG+AGG | 0.513698 | 3_4:-48023960 | Msa0504090:CDS |
| ATCTTAAGTACTGCTGGGAG+TGG | 0.515688 | 3_4:-48019167 | Msa0504090:CDS |
| AAGGATGCAGCACTAGGAAA+TGG | 0.519194 | 3_4:-48024274 | Msa0504090:CDS |
| CCTGGGGATGCCACAGAAGG+TGG | 0.519394 | 3_4:-48023351 | Msa0504090:CDS |
| GGCCATCTATTATAGGTGAA+TGG | 0.521441 | 3_4:-48022321 | Msa0504090:intron |
| TGGAGCTAATGTGGAAATCA+GGG | 0.523433 | 3_4:-48020681 | Msa0504090:CDS |
| GTGGGAAGTTCAGCAGTGAC+AGG | 0.524513 | 3_4:-48019148 | Msa0504090:CDS |
| CAGGAAAAGGATGCAGCACT+AGG | 0.524810 | 3_4:-48024280 | Msa0504090:CDS |
| TGCTAAACGGATAGTCAAGC+TGG | 0.525169 | 3_4:-48021098 | Msa0504090:CDS |
| CAAGTCTCATTCTGTTTCAG+TGG | 0.529577 | 3_4:-48018834 | Msa0504090:three_prime_UTR |
| CACTGTCATGATTGGAGGAA+AGG | 0.529940 | 3_4:-48021140 | Msa0504090:CDS |
| TTCCCAGAGGCGAAGACTGA+TGG | 0.530304 | 3_4:+48023725 | None:intergenic |
| TTTGAAGGAATGGTATTGCT+AGG | 0.531412 | 3_4:+48026182 | None:intergenic |
| ACATATTAGTACCGCAGGCA+TGG | 0.531917 | 3_4:-48020768 | Msa0504090:CDS |
| TTCTTTGCCTCTTCAAATCG+AGG | 0.532927 | 3_4:+48019860 | None:intergenic |
| ACTCTGGTATTGATAGGGTC+GGG | 0.533523 | 3_4:+48023089 | None:intergenic |
| AAACAGATAATCGCAAAAGA+AGG | 0.533857 | 3_4:-48024154 | Msa0504090:CDS |
| GCACGCACTGTCATGATTGG+AGG | 0.535278 | 3_4:-48021145 | Msa0504090:CDS |
| TACTTTAGATGGAGCTAATG+TGG | 0.537773 | 3_4:-48020690 | Msa0504090:CDS |
| TTACAATGTATCGGTGGCGG+AGG | 0.537864 | 3_4:-48020819 | Msa0504090:CDS |
| ACACTTAATTTACCTGCTTG+GGG | 0.538160 | 3_4:-48024208 | Msa0504090:CDS |
| ATATACTTCTCATGAATGCA+AGG | 0.538334 | 3_4:+48019051 | None:intergenic |
| ATAAGTAAACGCATCAACTC+TGG | 0.539867 | 3_4:+48023073 | None:intergenic |
| TGTTCAAGCTCAAACTTGAA+AGG | 0.539884 | 3_4:+48025537 | None:intergenic |
| GGAAATTCTGGTTATGGTCG+TGG | 0.539921 | 3_4:-48019776 | Msa0504090:CDS |
| GCCAGCCGAAAATGGATTGG+CGG | 0.540426 | 3_4:-48023807 | Msa0504090:intron |
| AACTCTGGTATTGATAGGGT+CGG | 0.542303 | 3_4:+48023088 | None:intergenic |
| GCTTGGATGGGATGAAGCAT+GGG | 0.543851 | 3_4:-48023038 | Msa0504090:CDS |
| ATGGCATTACACCTCGAAGA+TGG | 0.545189 | 3_4:-48022209 | Msa0504090:CDS |
| CAGAAGGTGGAAAACTTCTA+CGG | 0.546061 | 3_4:-48023338 | Msa0504090:CDS |
| GATGGCTAATAAGCAGCGCT+TGG | 0.548918 | 3_4:-48021957 | Msa0504090:CDS |
| ACCGATCTTGACTTACTGAC+AGG | 0.549416 | 3_4:-48022120 | Msa0504090:CDS |
| CTGCCTCCTCTCCTTGAACC+GGG | 0.550039 | 3_4:+48023171 | None:intergenic |
| TCCCAACATATTAGTACCGC+AGG | 0.550701 | 3_4:-48020773 | Msa0504090:CDS |
| ATTACAAATACCAATTTGGA+AGG | 0.551227 | 3_4:+48018860 | None:intergenic |
| ACTTGAAGAAATAACCGAGC+AGG | 0.556341 | 3_4:-48024501 | Msa0504090:intron |
| CATGGTGCAGTGACAAGAAA+AGG | 0.556413 | 3_4:-48019205 | Msa0504090:intron |
| CTGAGGAAGGAAAGAGAGGA+TGG | 0.557425 | 3_4:-48020599 | Msa0504090:CDS |
| AAGCAGATGCATTGAGAGAG+AGG | 0.557628 | 3_4:+48018953 | None:intergenic |
| GACAATTGCTCAGTATGCTA+AGG | 0.558452 | 3_4:-48019126 | Msa0504090:CDS |
| TAGGAAATGGTGGTCTTGGT+CGG | 0.558516 | 3_4:-48024261 | Msa0504090:CDS |
| AGCAGATGCATTGAGAGAGA+GGG | 0.558561 | 3_4:+48018954 | None:intergenic |
| ATTGTCCAAAATGCGCATGT+TGG | 0.561027 | 3_4:+48022607 | None:intergenic |
| TGATGTACCTCGACTGAGGA+AGG | 0.561412 | 3_4:-48020612 | Msa0504090:CDS |
| GAAATTGCTTCCTCGTCACA+TGG | 0.561842 | 3_4:-48022796 | Msa0504090:CDS |
| GTAGCTGCCTCTTGTACTCG+TGG | 0.562138 | 3_4:+48021861 | None:intergenic |
| ATCCGAACAACTGGCTTCTG+GGG | 0.563192 | 3_4:+48022581 | None:intergenic |
| ACCTGCTGTTGCAAATCCAT+TGG | 0.568297 | 3_4:-48025625 | Msa0504090:CDS |
| CATCAACTCTGGTATTGATA+GGG | 0.569093 | 3_4:+48023084 | None:intergenic |
| AAAGAAGTTTATTAGGAGTG+GGG | 0.569398 | 3_4:-48019843 | Msa0504090:CDS |
| GGTTCCATAGAAGAGACTAA+TGG | 0.569947 | 3_4:-48025678 | Msa0504090:CDS |
| TCATTTCCCGGTTCAAGGAG+AGG | 0.571549 | 3_4:-48023177 | Msa0504090:CDS |
| GCATACGTGAAGATATTTGA+AGG | 0.572648 | 3_4:+48026167 | None:intergenic |
| TAAGCCAAATAATCACTAAG+TGG | 0.573231 | 3_4:-48022164 | Msa0504090:CDS |
| AGCGTATCCACGAGTACAAG+AGG | 0.573947 | 3_4:-48021868 | Msa0504090:CDS |
| GGATGAAGAAGGGCTTGGAT+GGG | 0.574485 | 3_4:-48023050 | Msa0504090:CDS |
| CACTTAATTTACCTGCTTGG+GGG | 0.574585 | 3_4:-48024207 | Msa0504090:CDS |
| TGTCTATCTTAAGTACTGCT+GGG | 0.576462 | 3_4:-48019172 | Msa0504090:CDS |
| ACCTGTCAGTAAGTCAAGAT+CGG | 0.576769 | 3_4:+48022119 | None:intergenic |
| AATGATAAGTAAAACCCGAC+TGG | 0.577293 | 3_4:-48022648 | Msa0504090:CDS |
| AGGTAAATTAAGTGTTGCCA+TGG | 0.577786 | 3_4:+48024216 | None:intergenic |
| CGGTTCAAGGAGAGGAGGCA+GGG | 0.579612 | 3_4:-48023169 | Msa0504090:CDS |
| CATTAGGGTTAACCTCGACC+TGG | 0.581641 | 3_4:+48023948 | None:intergenic |
| AATTGTACAGCAACCTTCGT+CGG | 0.581739 | 3_4:+48023124 | None:intergenic |
| TCTGTTTAAATAGTCCGTAC+CGG | 0.582859 | 3_4:+48024170 | None:intergenic |
| AGGTCAGGAGGAAGTTGCTG+AGG | 0.588335 | 3_4:-48024134 | Msa0504090:CDS |
| CATCCGCTGTCGCACCAAAG+AGG | 0.589453 | 3_4:+48020633 | None:intergenic |
| GTTGGGATAGCTCACTTCCT+GGG | 0.589645 | 3_4:+48020789 | None:intergenic |
| TTTCCTCTTTGGTGCGACAG+CGG | 0.590527 | 3_4:-48020636 | Msa0504090:CDS |
| ATTTCCAATAGCATTGGTCA+AGG | 0.590725 | 3_4:+48024574 | None:intergenic |
| AAATTACAATGTATCGGTGG+CGG | 0.590929 | 3_4:-48020822 | Msa0504090:CDS |
| CCAGAAGCCAGTTGTTCGGA+TGG | 0.591835 | 3_4:-48022579 | Msa0504090:CDS |
| AATCGCAAAAGAAGGTCAGG+AGG | 0.592795 | 3_4:-48024146 | Msa0504090:CDS |
| AGGAGATGAGCCCTGAAGAA+CGG | 0.597395 | 3_4:-48021180 | Msa0504090:CDS |
| TCTCTTTCCTTCCTCAGTCG+AGG | 0.597849 | 3_4:+48020605 | None:intergenic |
| TCGTGCCTCACAATTTCCCA+AGG | 0.598830 | 3_4:+48023998 | None:intergenic |
| GGAAACTCGGACCAGTTCCA+AGG | 0.600518 | 3_4:+48023145 | None:intergenic |
| AGTTGCTGAGGACTGGCTCG+AGG | 0.600739 | 3_4:-48024122 | Msa0504090:intron |
| GTCAAGCTGGTCAATGATGT+TGG | 0.601373 | 3_4:-48021085 | Msa0504090:CDS |
| TTAGCCCTTGGGAAATTGTG+AGG | 0.601926 | 3_4:-48024003 | Msa0504090:CDS |
| TATCCTGGGGATGCCACAGA+AGG | 0.602412 | 3_4:-48023354 | Msa0504090:CDS |
| GTTTACTTATGGATGAAGAA+GGG | 0.604886 | 3_4:-48023060 | Msa0504090:CDS |
| CTGGTCCGAGTTTCCGACGA+AGG | 0.604965 | 3_4:-48023137 | Msa0504090:CDS |
| TTTGTGATAGGAGAAAGATA+AGG | 0.605342 | 3_4:-48025713 | Msa0504090:intron |
| CCAGCTGAAATTATGGTACA+CGG | 0.605531 | 3_4:+48019081 | None:intergenic |
| TTCAAGTAGCTATTGACCAC+AGG | 0.606557 | 3_4:+48021043 | None:intergenic |
| ACCGGATCCTCGATTTGAAG+AGG | 0.608188 | 3_4:-48019867 | Msa0504090:CDS |
| AATGGTCTCAGTCTGTAATG+TGG | 0.608222 | 3_4:-48022818 | Msa0504090:CDS |
| TCTTAAGTACTGCTGGGAGT+GGG | 0.611052 | 3_4:-48019166 | Msa0504090:CDS |
| AGTGAGGACTATATTGAGCA+TGG | 0.612263 | 3_4:+48025565 | None:intergenic |
| ACACAGTGATATATTGAAGT+CGG | 0.612649 | 3_4:-48022286 | Msa0504090:CDS |
| TGGTATTGATAGGGTCGGGT+GGG | 0.615079 | 3_4:+48023093 | None:intergenic |
| CTTGGCACAGTACGTTCTGA+AGG | 0.618440 | 3_4:-48021939 | Msa0504090:CDS |
| GTGGAAATCAGGGAAGAGAT+CGG | 0.619019 | 3_4:-48020671 | Msa0504090:CDS |
| TATGGTTTGAGGTACCGGTA+CGG | 0.619433 | 3_4:-48024184 | Msa0504090:CDS |
| CTGGTATTGATAGGGTCGGG+TGG | 0.620002 | 3_4:+48023092 | None:intergenic |
| ATAGAAGAGACTAATGGTGA+TGG | 0.620632 | 3_4:-48025672 | Msa0504090:CDS |
| TATGCCAGCCGAAAATGGAT+TGG | 0.620660 | 3_4:-48023810 | Msa0504090:intron |
| GCCACTTGCTTCCATGCCTG+CGG | 0.621602 | 3_4:+48020757 | None:intergenic |
| GAAGAGACTAATGGTGATGG+TGG | 0.623003 | 3_4:-48025669 | Msa0504090:CDS |
| AGTACGTTCTGAAGGTGACA+GGG | 0.624712 | 3_4:-48021931 | Msa0504090:CDS |
| TGTGCCAAATTACAATGTAT+CGG | 0.631942 | 3_4:-48020828 | Msa0504090:CDS |
| TGGATGGGATGAAGCATGGG+AGG | 0.633226 | 3_4:-48023035 | Msa0504090:CDS |
| ACCATTTCTCCAGTGCTTCG+GGG | 0.634093 | 3_4:+48022835 | None:intergenic |
| CCTGGCCAAAGAATCTGATA+GGG | 0.634245 | 3_4:+48023966 | None:intergenic |
| TATACTTCTCATGAATGCAA+GGG | 0.636811 | 3_4:+48019052 | None:intergenic |
| GATGCAGCACTAGGAAATGG+TGG | 0.643582 | 3_4:-48024271 | Msa0504090:CDS |
| TCGGATGGCAAATTTGTGTG+TGG | 0.644056 | 3_4:-48022564 | Msa0504090:CDS |
| GAATGTCAAATAGAGTATCA+GGG | 0.648034 | 3_4:+48021897 | None:intergenic |
| GTTCACTCTCAAGATCCAGT+CGG | 0.648340 | 3_4:+48022633 | None:intergenic |
| TCGAGGTTAACCCTAATGGA+AGG | 0.648776 | 3_4:-48023943 | Msa0504090:intron |
| TTATGACTTCCCAAGCTACG+TGG | 0.654121 | 3_4:-48019735 | Msa0504090:CDS |
| TCGACTGAGGAAGGAAAGAG+AGG | 0.654363 | 3_4:-48020603 | Msa0504090:CDS |
| TTTCCCGGTTCAAGGAGAGG+AGG | 0.656952 | 3_4:-48023174 | Msa0504090:CDS |
| ACCGCAGGCATGGAAGCAAG+TGG | 0.664367 | 3_4:-48020758 | Msa0504090:CDS |
| ATTTCTCCAGTGCTTCGGGG+AGG | 0.665090 | 3_4:+48022838 | None:intergenic |
| GGTGCAGTGACAAGAAAAGG+TGG | 0.675521 | 3_4:-48019202 | Msa0504090:intron |
| CGTGCCTCACAATTTCCCAA+GGG | 0.676969 | 3_4:+48023999 | None:intergenic |
| GCCAAATTACAATGTATCGG+TGG | 0.679301 | 3_4:-48020825 | Msa0504090:CDS |
| TCTATGATTTCCATGTGACG+AGG | 0.683452 | 3_4:+48022786 | None:intergenic |
| CACAAGCTTTAGCTTCCCAG+AGG | 0.688674 | 3_4:+48023712 | None:intergenic |
| CGGATGATGTACCTCGACTG+AGG | 0.697248 | 3_4:-48020616 | Msa0504090:CDS |
| ATGAAGATCTGCAAGCAGAG+TGG | 0.702272 | 3_4:-48021991 | Msa0504090:CDS |
| CTTACTGACAGGTCTTCGAG+AGG | 0.704813 | 3_4:-48022109 | Msa0504090:intron |
| TATTGTAAACAGTGATCCTG+TGG | 0.708804 | 3_4:-48021059 | Msa0504090:CDS |
| AACTTGAAAGGTGAAAAGTG+AGG | 0.718109 | 3_4:+48025549 | None:intergenic |
| GTACGTTCTGAAGGTGACAG+GGG | 0.729253 | 3_4:-48021930 | Msa0504090:CDS |
| AATCAGGGAAGAGATCGGTG+AGG | 0.747097 | 3_4:-48020666 | Msa0504090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATAACAATTTGATTAA+TGG | - | chr3_4:48019125-48019144 | Msa0504090:CDS | 10.0% |
| !! | TTTATAACAATTTGATTAAT+GGG | - | chr3_4:48019126-48019145 | Msa0504090:CDS | 10.0% |
| !!! | AAATTTTTTATTTTTTCTCT+TGG | - | chr3_4:48019156-48019175 | Msa0504090:CDS | 10.0% |
| !!! | AATTTTTTATTTTTTCTCTT+GGG | - | chr3_4:48019157-48019176 | Msa0504090:CDS | 10.0% |
| !! | AAGAAAGAGATTATTAAAAA+AGG | + | chr3_4:48018883-48018902 | None:intergenic | 15.0% |
| !!! | TTTTGTATTTTTTTCTTACT+TGG | - | chr3_4:48019052-48019071 | Msa0504090:three_prime_UTR | 15.0% |
| !! | AAAACATAAAAAATTAACAC+TGG | + | chr3_4:48019256-48019275 | None:intergenic | 15.0% |
| !!! | ATATAAAAGTACTTATAGTT+TGG | - | chr3_4:48021164-48021183 | Msa0504090:CDS | 15.0% |
| !!! | GATTTATTTTTATTCAATGA+TGG | - | chr3_4:48021323-48021342 | Msa0504090:intron | 15.0% |
| !! | TTTCACAAATAATATAAAGA+GGG | + | chr3_4:48022626-48022645 | None:intergenic | 15.0% |
| !! | ATTTCACAAATAATATAAAG+AGG | + | chr3_4:48022627-48022646 | None:intergenic | 15.0% |
| !! | AAATTTATTTACTTCATGTT+GGG | - | chr3_4:48022659-48022678 | Msa0504090:CDS | 15.0% |
| !!! | TTTGGTAAAACATTATTTTA+AGG | + | chr3_4:48023438-48023457 | None:intergenic | 15.0% |
| !!! | AAACAATGAATATATTTTGA+TGG | - | chr3_4:48024637-48024656 | Msa0504090:CDS | 15.0% |
| !! | AAATATAAAAAGGAAAATGT+GGG | + | chr3_4:48024774-48024793 | None:intergenic | 15.0% |
| !! | AAAATATAAAAAGGAAAATG+TGG | + | chr3_4:48024775-48024794 | None:intergenic | 15.0% |
| !!! | CGTTTTAAAAAATTAGAAAA+TGG | + | chr3_4:48024845-48024864 | None:intergenic | 15.0% |
| !!! | TAAGTGTATATATTGTTTTT+TGG | - | chr3_4:48025764-48025783 | Msa0504090:intron | 15.0% |
| !! | AAGTTGAATAATTGAAGAAA+TGG | + | chr3_4:48018908-48018927 | None:intergenic | 20.0% |
| !!! | TTTTCTGACAATTTGATTAA+TGG | - | chr3_4:48019016-48019035 | Msa0504090:three_prime_UTR | 20.0% |
| !! | TTTCTGACAATTTGATTAAT+GGG | - | chr3_4:48019017-48019036 | Msa0504090:three_prime_UTR | 20.0% |
| !! | AAAGATAAGGATTTGAAAAA+TGG | - | chr3_4:48019301-48019320 | Msa0504090:intron | 20.0% |
| !! | AAGATAAGGATTTGAAAAAT+GGG | - | chr3_4:48019302-48019321 | Msa0504090:intron | 20.0% |
| !! | TATATGATGATACATTTACT+TGG | - | chr3_4:48019534-48019553 | Msa0504090:intron | 20.0% |
| !! | AAAGAAGTAAAAAAGGTAAA+AGG | + | chr3_4:48020031-48020050 | None:intergenic | 20.0% |
| !!! | AATTTAAAGCTAATTAACCA+AGG | - | chr3_4:48020157-48020176 | Msa0504090:intron | 20.0% |
| !!! | ATTTAAAGCTAATTAACCAA+GGG | - | chr3_4:48020158-48020177 | Msa0504090:intron | 20.0% |
| !!! | TTTGTTCTGAAATCTTATAA+TGG | + | chr3_4:48021501-48021520 | None:intergenic | 20.0% |
| !!! | ATTTGTTTTGTAGATTTGTT+CGG | - | chr3_4:48021619-48021638 | Msa0504090:intron | 20.0% |
| !! | AAATAATATAAAGAGGGTTA+TGG | + | chr3_4:48022620-48022639 | None:intergenic | 20.0% |
| !! | GAAATTTATTTACTTCATGT+TGG | - | chr3_4:48022658-48022677 | Msa0504090:CDS | 20.0% |
| !! | TTGCAAATTATGTTTCAATA+TGG | - | chr3_4:48022744-48022763 | Msa0504090:intron | 20.0% |
| !! | AAGTTCCAAAATAAAACTAA+TGG | - | chr3_4:48022773-48022792 | Msa0504090:CDS | 20.0% |
| !!! | TAATGCCATTAGTTTTATTT+TGG | + | chr3_4:48022781-48022800 | None:intergenic | 20.0% |
| !! | CTATAGATATAAAAAGTTGA+AGG | - | chr3_4:48023182-48023201 | Msa0504090:CDS | 20.0% |
| !!! | CATTATTTTAAGGATTGATA+TGG | + | chr3_4:48023428-48023447 | None:intergenic | 20.0% |
| !! | TTAGTACCTCTAAATAAATT+TGG | - | chr3_4:48023518-48023537 | Msa0504090:intron | 20.0% |
| !!! | TTTTCACCAAATTTATTTAG+AGG | + | chr3_4:48023527-48023546 | None:intergenic | 20.0% |
| !!! | TTTGGTGAAAAATATTTTGA+AGG | - | chr3_4:48023536-48023555 | Msa0504090:intron | 20.0% |
| !! | ATTTCTGCAAATTTATTTAG+AGG | + | chr3_4:48023605-48023624 | None:intergenic | 20.0% |
| !!! | CATATTTTTCATAAAATGCT+GGG | + | chr3_4:48023764-48023783 | None:intergenic | 20.0% |
| !!! | TCATATTTTTCATAAAATGC+TGG | + | chr3_4:48023765-48023784 | None:intergenic | 20.0% |
| !! | TTGTGATGATATGTTTATTA+AGG | - | chr3_4:48024105-48024124 | Msa0504090:intron | 20.0% |
| !!! | AAAAAAATGACATTTTTTGC+AGG | + | chr3_4:48024592-48024611 | None:intergenic | 20.0% |
| !!! | CCACTTTTAAAATTTTGTAT+CGG | + | chr3_4:48024666-48024685 | None:intergenic | 20.0% |
| !!! | CGATACAAAATTTTAAAAGT+GGG | - | chr3_4:48024664-48024683 | Msa0504090:intron | 20.0% |
| !!! | GATACAAAATTTTAAAAGTG+GGG | - | chr3_4:48024665-48024684 | Msa0504090:intron | 20.0% |
| !! | GTTGAAGTGAAAATATAAAA+AGG | + | chr3_4:48024784-48024803 | None:intergenic | 20.0% |
| !!! | AAAGAAACTGAAGTATTTTT+AGG | - | chr3_4:48025038-48025057 | Msa0504090:intron | 20.0% |
| !!! | AGTATTTTTAGGAAGTAAAT+AGG | - | chr3_4:48025049-48025068 | Msa0504090:intron | 20.0% |
| !! | CAATCATTATGCAAATATTA+GGG | + | chr3_4:48025075-48025094 | None:intergenic | 20.0% |
| !! | ACAATCATTATGCAAATATT+AGG | + | chr3_4:48025076-48025095 | None:intergenic | 20.0% |
| !! | TTACTAAAATAACGTCTAAT+AGG | + | chr3_4:48025437-48025456 | None:intergenic | 20.0% |
| !! | ATTAGATGTGATATAAAACT+TGG | + | chr3_4:48025554-48025573 | None:intergenic | 20.0% |
| !! | CTTGAATTTGTAAAATAGTT+TGG | + | chr3_4:48025609-48025628 | None:intergenic | 20.0% |
| !!! | AAACAGTTTGATTTAATTAG+TGG | + | chr3_4:48025664-48025683 | None:intergenic | 20.0% |
| !!! | ATACACTTACGATAATTTTA+TGG | + | chr3_4:48025753-48025772 | None:intergenic | 20.0% |
| !! | TTTTGTGACAATTGGATTAA+TGG | - | chr3_4:48019229-48019248 | Msa0504090:intron | 25.0% |
| ! | TTTGTGACAATTGGATTAAT+GGG | - | chr3_4:48019230-48019249 | Msa0504090:intron | 25.0% |
| !!! | GTTTTGTTTTGTTTTGTGAT+AGG | - | chr3_4:48019276-48019295 | Msa0504090:intron | 25.0% |
| ! | ATGATACATTTACTTGGAAT+TGG | - | chr3_4:48019540-48019559 | Msa0504090:intron | 25.0% |
| ! | TGATACATTTACTTGGAATT+GGG | - | chr3_4:48019541-48019560 | Msa0504090:intron | 25.0% |
| ! | AATAATCATTTGTGTGTCAA+TGG | - | chr3_4:48019591-48019610 | Msa0504090:intron | 25.0% |
| ! | TGCTTTAGTTATAGCTATAA+TGG | - | chr3_4:48019673-48019692 | Msa0504090:intron | 25.0% |
| !!! | GTTTTTTATGAAAACATACC+AGG | + | chr3_4:48019718-48019737 | None:intergenic | 25.0% |
| ! | GTCACATAAAGAAGTAAAAA+AGG | + | chr3_4:48020038-48020057 | None:intergenic | 25.0% |
| ! | TATTACAATTTCATTACCCT+TGG | + | chr3_4:48020177-48020196 | None:intergenic | 25.0% |
| ! | GATGATAATTATTTCAGCAA+TGG | - | chr3_4:48020325-48020344 | Msa0504090:intron | 25.0% |
| ! | ATTCAAATTTCCAATAGCAT+TGG | + | chr3_4:48020436-48020455 | None:intergenic | 25.0% |
| !! | GAAGTGATTTGGATTTATAA+AGG | + | chr3_4:48020631-48020650 | None:intergenic | 25.0% |
| ! | AAATATGTCATACACTTTCA+TGG | + | chr3_4:48020934-48020953 | None:intergenic | 25.0% |
| !!! | AAAATAGTTTTACACTGCTT+TGG | - | chr3_4:48021109-48021128 | Msa0504090:CDS | 25.0% |
| ! | AGGATACAACAAAATTCAAT+AGG | + | chr3_4:48021525-48021544 | None:intergenic | 25.0% |
| ! | ATGTTTGATTCTTCTTTACA+GGG | + | chr3_4:48021568-48021587 | None:intergenic | 25.0% |
| ! | AATGTTTGATTCTTCTTTAC+AGG | + | chr3_4:48021569-48021588 | None:intergenic | 25.0% |
| ! | TTTAATATGAAACTGCTTCA+CGG | + | chr3_4:48021597-48021616 | None:intergenic | 25.0% |
| !! | AATCCAGAATTTAACTTACT+TGG | + | chr3_4:48021724-48021743 | None:intergenic | 25.0% |
| ! | AAGTTAAATTCTGGATTCAA+TGG | - | chr3_4:48021727-48021746 | Msa0504090:intron | 25.0% |
| ! | CAATCTAGAAAGAAAGAAAA+TGG | + | chr3_4:48022048-48022067 | None:intergenic | 25.0% |
| !!! | AGCATCATATTTTAGCAATA+AGG | + | chr3_4:48022103-48022122 | None:intergenic | 25.0% |
| ! | TTTCTCCAAATACACTTATA+AGG | - | chr3_4:48022536-48022555 | Msa0504090:intron | 25.0% |
| ! | ATCAACCTTATAAGTGTATT+TGG | + | chr3_4:48022544-48022563 | None:intergenic | 25.0% |
| ! | CAATATATCACTGTGTAATT+GGG | + | chr3_4:48022711-48022730 | None:intergenic | 25.0% |
| ! | TCAATATATCACTGTGTAAT+TGG | + | chr3_4:48022712-48022731 | None:intergenic | 25.0% |
| !!! | GTTTTATTTTGGAACTTTGT+TGG | + | chr3_4:48022770-48022789 | None:intergenic | 25.0% |
| ! | TTAACCACTTAGTGATTATT+TGG | + | chr3_4:48022844-48022863 | None:intergenic | 25.0% |
| ! | TGTTAGAATGTTTCAATAAC+AGG | + | chr3_4:48022952-48022971 | None:intergenic | 25.0% |
| !! | TGTCAATTTTGAACTTTTGA+GGG | + | chr3_4:48023466-48023485 | None:intergenic | 25.0% |
| ! | TTTGCAGAAATATAGTTTGA+AGG | - | chr3_4:48023614-48023633 | Msa0504090:intron | 25.0% |
| ! | ATAGTTTGAAGGACTAATAT+AGG | - | chr3_4:48023625-48023644 | Msa0504090:intron | 25.0% |
| ! | TAGTTTGAAGGACTAATATA+GGG | - | chr3_4:48023626-48023645 | Msa0504090:intron | 25.0% |
| ! | AATGGTTTCTCTATAGATTA+GGG | + | chr3_4:48023714-48023733 | None:intergenic | 25.0% |
| ! | AAATGGTTTCTCTATAGATT+AGG | + | chr3_4:48023715-48023734 | None:intergenic | 25.0% |
| !! | AAAAAGTGTAATCCTTCAAA+TGG | + | chr3_4:48023732-48023751 | None:intergenic | 25.0% |
| !! | AACATGAAATTTGCTTTGAA+TGG | - | chr3_4:48024273-48024292 | Msa0504090:CDS | 25.0% |
| !! | ACATGAAATTTGCTTTGAAT+GGG | - | chr3_4:48024274-48024293 | Msa0504090:CDS | 25.0% |
| !! | CATCTAAAGTACCTATAATA+AGG | + | chr3_4:48024302-48024321 | None:intergenic | 25.0% |
| ! | CTTATTATAGGTACTTTAGA+TGG | - | chr3_4:48024300-48024319 | Msa0504090:intron | 25.0% |
| !!! | CTGTATAAAATTTTGACAAC+AGG | + | chr3_4:48024616-48024635 | None:intergenic | 25.0% |
| !! | CTGTTGTCAAAATTTTATAC+AGG | - | chr3_4:48024614-48024633 | Msa0504090:CDS | 25.0% |
| !!! | CCGATACAAAATTTTAAAAG+TGG | - | chr3_4:48024663-48024682 | Msa0504090:intron | 25.0% |
| ! | TTAACCATAATAAACAGCTA+GGG | + | chr3_4:48025363-48025382 | None:intergenic | 25.0% |
| ! | TTTAACCATAATAAACAGCT+AGG | + | chr3_4:48025364-48025383 | None:intergenic | 25.0% |
| ! | TATTATGGTTAAAGTCAGTT+TGG | - | chr3_4:48025371-48025390 | Msa0504090:intron | 25.0% |
| ! | TTAGTAAAACTCTAGATGTA+TGG | - | chr3_4:48025450-48025469 | Msa0504090:intron | 25.0% |
| !!! | ATTGATTTTAACTTCCAATC+TGG | - | chr3_4:48025488-48025507 | Msa0504090:intron | 25.0% |
| ! | ATTACAAATACCAATTTGGA+AGG | + | chr3_4:48026144-48026163 | None:intergenic | 25.0% |
| ! | TTCCAAATTGGTATTTGTAA+TGG | - | chr3_4:48026143-48026162 | Msa0504090:intron | 25.0% |
| GGAAAAAGAGAATCTATGTT+TGG | + | chr3_4:48018862-48018881 | None:intergenic | 30.0% | |
| ! | TAACAATTTGATTAATGGGC+TGG | - | chr3_4:48019130-48019149 | Msa0504090:CDS | 30.0% |
| ! | GTTCAGATTTTTGTGACAAT+TGG | - | chr3_4:48019221-48019240 | Msa0504090:intron | 30.0% |
| TTTGTGATAGGAGAAAGATA+AGG | - | chr3_4:48019288-48019307 | Msa0504090:intron | 30.0% | |
| GTTATAGCTATAATGGTCAT+TGG | - | chr3_4:48019680-48019699 | Msa0504090:intron | 30.0% | |
| CAGGATAGCTTATATGAATA+CGG | + | chr3_4:48019813-48019832 | None:intergenic | 30.0% | |
| ATCATACCAACAATTTGACT+TGG | - | chr3_4:48019976-48019995 | Msa0504090:intron | 30.0% | |
| CAATACAAGTATACTAACCT+AGG | + | chr3_4:48020269-48020288 | None:intergenic | 30.0% | |
| CTAGGTTAGTATACTTGTAT+TGG | - | chr3_4:48020267-48020286 | Msa0504090:intron | 30.0% | |
| !! | GTATACTTGTATTGGTTGTT+TGG | - | chr3_4:48020275-48020294 | Msa0504090:intron | 30.0% |
| ! | GATAAGTAGTAAGTTTGCTT+GGG | + | chr3_4:48020384-48020403 | None:intergenic | 30.0% |
| ! | TGATAAGTAGTAAGTTTGCT+TGG | + | chr3_4:48020385-48020404 | None:intergenic | 30.0% |
| GCAAACTTACTACTTATCAA+TGG | - | chr3_4:48020386-48020405 | Msa0504090:intron | 30.0% | |
| AAGCTTTCATTATGAGCAAT+GGG | + | chr3_4:48020608-48020627 | None:intergenic | 30.0% | |
| TCCAAATCACTTCATATCTA+TGG | - | chr3_4:48020638-48020657 | Msa0504090:CDS | 30.0% | |
| ACCATAGATATGAAGTGATT+TGG | + | chr3_4:48020642-48020661 | None:intergenic | 30.0% | |
| CTGCAAAGATTCATGTTAAA+AGG | + | chr3_4:48020704-48020723 | None:intergenic | 30.0% | |
| ! | CTTTTAACATGAATCTTTGC+AGG | - | chr3_4:48020702-48020721 | Msa0504090:CDS | 30.0% |
| AACACTTAATTTACCTGCTT+GGG | - | chr3_4:48020792-48020811 | Msa0504090:CDS | 30.0% | |
| AAACAGATAATCGCAAAAGA+AGG | - | chr3_4:48020847-48020866 | Msa0504090:intron | 30.0% | |
| TTTACACTTACCTTCCATTA+GGG | + | chr3_4:48021071-48021090 | None:intergenic | 30.0% | |
| ATTTACACTTACCTTCCATT+AGG | + | chr3_4:48021072-48021091 | None:intergenic | 30.0% | |
| ! | GTGAATTTTGAATCTTGTTC+AGG | - | chr3_4:48021399-48021418 | Msa0504090:intron | 30.0% |
| ACTCCAAGTAAGTTAAATTC+TGG | - | chr3_4:48021718-48021737 | Msa0504090:intron | 30.0% | |
| GTTTACTTATGGATGAAGAA+GGG | - | chr3_4:48021941-48021960 | Msa0504090:CDS | 30.0% | |
| TATGATGCTATATCTTAACC+AGG | - | chr3_4:48022114-48022133 | Msa0504090:CDS | 30.0% | |
| GAGTTTATTGAAGAGAAACA+AGG | + | chr3_4:48022274-48022293 | None:intergenic | 30.0% | |
| TCTTCAATAAACTCAGTGAA+AGG | - | chr3_4:48022280-48022299 | Msa0504090:CDS | 30.0% | |
| AGTGTATTTGGAGAAATTAG+AGG | + | chr3_4:48022532-48022551 | None:intergenic | 30.0% | |
| TCAACCATGAAAAAACTAGA+TGG | + | chr3_4:48022585-48022604 | None:intergenic | 30.0% | |
| ACACAGTGATATATTGAAGT+CGG | - | chr3_4:48022715-48022734 | Msa0504090:intron | 30.0% | |
| TAAGCCAAATAATCACTAAG+TGG | - | chr3_4:48022837-48022856 | Msa0504090:CDS | 30.0% | |
| AGTGGTTAAAAACTGATAAG+TGG | - | chr3_4:48022855-48022874 | Msa0504090:CDS | 30.0% | |
| GTGGTTAAAAACTGATAAGT+GGG | - | chr3_4:48022856-48022875 | Msa0504090:CDS | 30.0% | |
| ! | GAATGTCAAATAGAGTATCA+GGG | + | chr3_4:48023107-48023126 | None:intergenic | 30.0% |
| ! | TGAATGTCAAATAGAGTATC+AGG | + | chr3_4:48023108-48023127 | None:intergenic | 30.0% |
| GCAATATTATCCTATGTTCA+AGG | + | chr3_4:48023282-48023301 | None:intergenic | 30.0% | |
| !! | AATGGACTAATTTGATGACA+GGG | + | chr3_4:48023389-48023408 | None:intergenic | 30.0% |
| !! | TAATGGACTAATTTGATGAC+AGG | + | chr3_4:48023390-48023409 | None:intergenic | 30.0% |
| !!! | GGCAACTCTTCATTTTTTAA+TGG | + | chr3_4:48023407-48023426 | None:intergenic | 30.0% |
| ! | GTGTCAATTTTGAACTTTTG+AGG | + | chr3_4:48023467-48023486 | None:intergenic | 30.0% |
| TCTATAGAGAAACCATTTGA+AGG | - | chr3_4:48023717-48023736 | Msa0504090:CDS | 30.0% | |
| ! | TTTCAACTTTCTGAAAGCAA+AGG | + | chr3_4:48024024-48024043 | None:intergenic | 30.0% |
| GATATGACAATTTGTGAACA+AGG | + | chr3_4:48024064-48024083 | None:intergenic | 30.0% | |
| TGTTCACAAATTGTCATATC+TGG | - | chr3_4:48024064-48024083 | Msa0504090:intron | 30.0% | |
| TGTGCCAAATTACAATGTAT+CGG | - | chr3_4:48024173-48024192 | Msa0504090:CDS | 30.0% | |
| ! | AATAACCAAACAAGCTCTAA+GGG | - | chr3_4:48024737-48024756 | Msa0504090:intron | 30.0% |
| ! | TTGTGATTTGAAGTTCAAAC+CGG | - | chr3_4:48025116-48025135 | Msa0504090:intron | 30.0% |
| AAGAGGCAAAGAAGTTTATT+AGG | - | chr3_4:48025151-48025170 | Msa0504090:intron | 30.0% | |
| CAAAGAAGTTTATTAGGAGT+GGG | - | chr3_4:48025157-48025176 | Msa0504090:intron | 30.0% | |
| AAAGAAGTTTATTAGGAGTG+GGG | - | chr3_4:48025158-48025177 | Msa0504090:intron | 30.0% | |
| AAAAAGTAGACGAAGCATAT+TGG | - | chr3_4:48025298-48025317 | Msa0504090:intron | 30.0% | |
| ACTAAAAGGAGAAAATGTGA+GGG | + | chr3_4:48025335-48025354 | None:intergenic | 30.0% | |
| AACTAAAAGGAGAAAATGTG+AGG | + | chr3_4:48025336-48025355 | None:intergenic | 30.0% | |
| AAATCAACTTCAACACTCTA+CGG | + | chr3_4:48025409-48025428 | None:intergenic | 30.0% | |
| !! | TAGTTTGGAAATGATTTGCT+TGG | + | chr3_4:48025594-48025613 | None:intergenic | 30.0% |
| ! | TTTTGCTTCAGAAAAGTGAT+AGG | + | chr3_4:48025704-48025723 | None:intergenic | 30.0% |
| !!! | GTTTTTTGGTATGTTTTGCA+TGG | - | chr3_4:48025778-48025797 | Msa0504090:intron | 30.0% |
| TATACTTCTCATGAATGCAA+GGG | + | chr3_4:48025952-48025971 | None:intergenic | 30.0% | |
| ATATACTTCTCATGAATGCA+AGG | + | chr3_4:48025953-48025972 | None:intergenic | 30.0% | |
| GTCCATTACAAATACCAATT+TGG | + | chr3_4:48026148-48026167 | None:intergenic | 30.0% | |
| TTTGAAGGAATGGTATTGCT+AGG | + | chr3_4:48018822-48018841 | None:intergenic | 35.0% | |
| CGTGAAGATATTTGAAGGAA+TGG | + | chr3_4:48018832-48018851 | None:intergenic | 35.0% | |
| GCATACGTGAAGATATTTGA+AGG | + | chr3_4:48018837-48018856 | None:intergenic | 35.0% | |
| !! | TTTTTCTCTTGGGTTGCTTT+TGG | - | chr3_4:48019167-48019186 | Msa0504090:CDS | 35.0% |
| !!! | TTTTCTCTTGGGTTGCTTTT+GGG | - | chr3_4:48019168-48019187 | Msa0504090:CDS | 35.0% |
| ! | ATCACCATTAGTCTCTTCTA+TGG | + | chr3_4:48019330-48019349 | None:intergenic | 35.0% |
| ATAGAAGAGACTAATGGTGA+TGG | - | chr3_4:48019329-48019348 | Msa0504090:intron | 35.0% | |
| ATGTTAGAAGCAATCTCATC+AGG | + | chr3_4:48019410-48019429 | None:intergenic | 35.0% | |
| AACTTGAAAGGTGAAAAGTG+AGG | + | chr3_4:48019455-48019474 | None:intergenic | 35.0% | |
| TGTTCAAGCTCAAACTTGAA+AGG | + | chr3_4:48019467-48019486 | None:intergenic | 35.0% | |
| CGTATTCATATAAGCTATCC+TGG | - | chr3_4:48019811-48019830 | Msa0504090:CDS | 35.0% | |
| ! | ACTGTTTTCAGCTTATTTCC+AGG | + | chr3_4:48019832-48019851 | None:intergenic | 35.0% |
| CAGTAACCAAGTCAAATTGT+TGG | + | chr3_4:48019985-48020004 | None:intergenic | 35.0% | |
| CAACTTCAGTCACATTAACT+TGG | - | chr3_4:48020086-48020105 | Msa0504090:intron | 35.0% | |
| !!! | CAAGTTGCGATTCGTTTTTT+AGG | - | chr3_4:48020116-48020135 | Msa0504090:intron | 35.0% |
| TAGGACTTAAATCAAATGCG+AGG | + | chr3_4:48020250-48020269 | None:intergenic | 35.0% | |
| ! | TCGCATTTGATTTAAGTCCT+AGG | - | chr3_4:48020249-48020268 | Msa0504090:intron | 35.0% |
| !! | CTTGTATTGGTTGTTTGGAT+AGG | - | chr3_4:48020280-48020299 | Msa0504090:intron | 35.0% |
| TTATCAATGGAGTTCCTTCA+AGG | - | chr3_4:48020399-48020418 | Msa0504090:intron | 35.0% | |
| !! | ATTTCCAATAGCATTGGTCA+AGG | + | chr3_4:48020430-48020449 | None:intergenic | 35.0% |
| ! | GCAACTTTTTATTACCTGCT+CGG | + | chr3_4:48020517-48020536 | None:intergenic | 35.0% |
| CAATCTCTCTTCTTTAGTAC+TGG | - | chr3_4:48020547-48020566 | Msa0504090:intron | 35.0% | |
| GAAGCTTTCATTATGAGCAA+TGG | + | chr3_4:48020609-48020628 | None:intergenic | 35.0% | |
| !! | GTAATCGTGTTTTTATACGC+TGG | + | chr3_4:48020677-48020696 | None:intergenic | 35.0% |
| ACATGAATCTTTGCAGGAAA+AGG | - | chr3_4:48020708-48020727 | Msa0504090:CDS | 35.0% | |
| ! | AGGTAAATTAAGTGTTGCCA+TGG | + | chr3_4:48020788-48020807 | None:intergenic | 35.0% |
| CAACACTTAATTTACCTGCT+TGG | - | chr3_4:48020791-48020810 | Msa0504090:CDS | 35.0% | |
| ACACTTAATTTACCTGCTTG+GGG | - | chr3_4:48020793-48020812 | Msa0504090:CDS | 35.0% | |
| TCTGTTTAAATAGTCCGTAC+CGG | + | chr3_4:48020834-48020853 | None:intergenic | 35.0% | |
| TTGTACCCTATCAGATTCTT+TGG | - | chr3_4:48021030-48021049 | Msa0504090:intron | 35.0% | |
| ! | TTTTACACTGCTTTGGTACA+TGG | - | chr3_4:48021116-48021135 | Msa0504090:CDS | 35.0% |
| CATGATCTTTGACAATGAAC+TGG | + | chr3_4:48021430-48021449 | None:intergenic | 35.0% | |
| AGAGGTGATAATCATGATTG+AGG | + | chr3_4:48021545-48021564 | None:intergenic | 35.0% | |
| !! | ATTTGTTCGGTTTTGTATCC+TGG | - | chr3_4:48021632-48021651 | Msa0504090:intron | 35.0% |
| !! | TTTGTTCGGTTTTGTATCCT+GGG | - | chr3_4:48021633-48021652 | Msa0504090:intron | 35.0% |
| AATTACAGGACATCATTTCC+CGG | - | chr3_4:48021812-48021831 | Msa0504090:intron | 35.0% | |
| !! | CATCAACTCTGGTATTGATA+GGG | + | chr3_4:48021920-48021939 | None:intergenic | 35.0% |
| ATAAGTAAACGCATCAACTC+TGG | + | chr3_4:48021931-48021950 | None:intergenic | 35.0% | |
| !! | AGAGTTGATGCGTTTACTTA+TGG | - | chr3_4:48021930-48021949 | Msa0504090:CDS | 35.0% |
| CGTTTACTTATGGATGAAGA+AGG | - | chr3_4:48021940-48021959 | Msa0504090:CDS | 35.0% | |
| ATTAGTGTAAGCAATTGTCC+TGG | + | chr3_4:48022135-48022154 | None:intergenic | 35.0% | |
| TATCATTGTAGTGAACTGCA+TGG | + | chr3_4:48022340-48022359 | None:intergenic | 35.0% | |
| AATGATAAGTAAAACCCGAC+TGG | - | chr3_4:48022353-48022372 | Msa0504090:intron | 35.0% | |
| AAGACATCAATAGGGTAAGA+TGG | + | chr3_4:48022505-48022524 | None:intergenic | 35.0% | |
| GAGGATAGAAGACATCAATA+GGG | + | chr3_4:48022513-48022532 | None:intergenic | 35.0% | |
| AGAGGATAGAAGACATCAAT+AGG | + | chr3_4:48022514-48022533 | None:intergenic | 35.0% | |
| !!! | GACACCATCTAGTTTTTTCA+TGG | - | chr3_4:48022578-48022597 | Msa0504090:CDS | 35.0% |
| CTCCATTCACCTATAATAGA+TGG | + | chr3_4:48022685-48022704 | None:intergenic | 35.0% | |
| CAAAAATTGATCCATCTTCG+AGG | + | chr3_4:48022806-48022825 | None:intergenic | 35.0% | |
| ACATTCTAACATTTGATCCC+TGG | - | chr3_4:48022961-48022980 | Msa0504090:intron | 35.0% | |
| GGATATTGAGAGAGATAATG+TGG | + | chr3_4:48023368-48023387 | None:intergenic | 35.0% | |
| !! | GAACTTTTGAGGGACTAATT+TGG | + | chr3_4:48023456-48023475 | None:intergenic | 35.0% |
| AGTAATGATACCGACACAAA+GGG | + | chr3_4:48023499-48023518 | None:intergenic | 35.0% | |
| AAGTAATGATACCGACACAA+AGG | + | chr3_4:48023500-48023519 | None:intergenic | 35.0% | |
| ! | AAATCTTTGAGAGGCTAACT+TGG | - | chr3_4:48023655-48023674 | Msa0504090:CDS | 35.0% |
| ! | TTGTACTTTTCCGTTCTTCA+GGG | + | chr3_4:48023834-48023853 | None:intergenic | 35.0% |
| CGACTTACACAAATGCTAAA+CGG | - | chr3_4:48023890-48023909 | Msa0504090:intron | 35.0% | |
| TATTGTAAACAGTGATCCTG+TGG | - | chr3_4:48023942-48023961 | Msa0504090:intron | 35.0% | |
| TCACAAATTGTCATATCTGG+TGG | - | chr3_4:48024067-48024086 | Msa0504090:intron | 35.0% | |
| !! | AGCTTGTTCAAACCTTTTTC+AGG | - | chr3_4:48024143-48024162 | Msa0504090:CDS | 35.0% |
| ! | AAATTACAATGTATCGGTGG+CGG | - | chr3_4:48024179-48024198 | Msa0504090:CDS | 35.0% |
| ! | TTGAATGGGTGCCTTATTAT+AGG | - | chr3_4:48024288-48024307 | Msa0504090:intron | 35.0% |
| TACTTTAGATGGAGCTAATG+TGG | - | chr3_4:48024311-48024330 | Msa0504090:intron | 35.0% | |
| !!! | GAGGAGAATTTTTTCCTCTT+TGG | - | chr3_4:48024354-48024373 | Msa0504090:intron | 35.0% |
| CAATAACCAAACAAGCTCTA+AGG | - | chr3_4:48024736-48024755 | Msa0504090:intron | 35.0% | |
| GTGATAGAGAGAAGATGTAA+GGG | + | chr3_4:48024953-48024972 | None:intergenic | 35.0% | |
| TGTGATAGAGAGAAGATGTA+AGG | + | chr3_4:48024954-48024973 | None:intergenic | 35.0% | |
| GCAAAGAAGTTTATTAGGAG+TGG | - | chr3_4:48025156-48025175 | Msa0504090:intron | 35.0% | |
| CTTCCAATGAATCAAGCAAT+GGG | + | chr3_4:48025206-48025225 | None:intergenic | 35.0% | |
| GATTCATTGGAAGGAAATTC+TGG | - | chr3_4:48025213-48025232 | Msa0504090:intron | 35.0% | |
| ! | TTGGAAGGAAATTCTGGTTA+TGG | - | chr3_4:48025219-48025238 | Msa0504090:intron | 35.0% |
| TTCTCCCTAGCTGTTTATTA+TGG | - | chr3_4:48025356-48025375 | Msa0504090:intron | 35.0% | |
| ACTTCTAGTCAAATCCAGAT+TGG | + | chr3_4:48025505-48025524 | None:intergenic | 35.0% | |
| ! | AGTGATAGGTGATGTTACTT+TGG | + | chr3_4:48025690-48025709 | None:intergenic | 35.0% |
| ! | ATGTCTATCTTAAGTACTGC+TGG | - | chr3_4:48025828-48025847 | Msa0504090:intron | 35.0% |
| ! | TGTCTATCTTAAGTACTGCT+GGG | - | chr3_4:48025829-48025848 | Msa0504090:intron | 35.0% |
| CTCAGTATGCTAAGGAAATT+TGG | - | chr3_4:48025883-48025902 | Msa0504090:intron | 35.0% | |
| GATGTATCCAGCTGAAATTA+TGG | + | chr3_4:48025930-48025949 | None:intergenic | 35.0% | |
| ! | ATTTGCTTAGCCTTCCAAAT+TGG | - | chr3_4:48026131-48026150 | Msa0504090:intron | 35.0% |
| !!! | ACTGCTACTTTTCTCTCAAC+TGG | - | chr3_4:48018937-48018956 | Msa0504090:three_prime_UTR | 40.0% |
| !!! | CTGCTACTTTTCTCTCAACT+GGG | - | chr3_4:48018938-48018957 | Msa0504090:three_prime_UTR | 40.0% |
| GGTTCCATAGAAGAGACTAA+TGG | - | chr3_4:48019323-48019342 | Msa0504090:intron | 40.0% | |
| !! | TCATCAGGTTTTTCAGCCAA+TGG | + | chr3_4:48019395-48019414 | None:intergenic | 40.0% |
| AGTGAGGACTATATTGAGCA+TGG | + | chr3_4:48019439-48019458 | None:intergenic | 40.0% | |
| !! | TAGAAGTGCACTTTTGCTGT+AGG | - | chr3_4:48019627-48019646 | Msa0504090:intron | 40.0% |
| !!! | CATTGGTGATGTTTTTGACC+TGG | - | chr3_4:48019697-48019716 | Msa0504090:intron | 40.0% |
| AACTTGATCCTACAGCTTTC+TGG | + | chr3_4:48019911-48019930 | None:intergenic | 40.0% | |
| TTTGTACGACAGAAAGCTGT+AGG | - | chr3_4:48019949-48019968 | Msa0504090:intron | 40.0% | |
| ACTTGAAGAAATAACCGAGC+AGG | - | chr3_4:48020500-48020519 | Msa0504090:intron | 40.0% | |
| TTCTTGCTTTCTGGATTCCA+TGG | - | chr3_4:48020768-48020787 | Msa0504090:CDS | 40.0% | |
| CACTTAATTTACCTGCTTGG+GGG | - | chr3_4:48020794-48020813 | Msa0504090:CDS | 40.0% | |
| GATAATCGCAAAAGAAGGTC+AGG | - | chr3_4:48020852-48020871 | Msa0504090:intron | 40.0% | |
| CAAACAGAAGTTTAGCCCTT+GGG | - | chr3_4:48020987-48021006 | Msa0504090:intron | 40.0% | |
| !! | TTGGTTTGGTATCCAGGAAT+TGG | + | chr3_4:48021251-48021270 | None:intergenic | 40.0% |
| TGATTCTTCTTTACAGGGAG+AGG | + | chr3_4:48021563-48021582 | None:intergenic | 40.0% | |
| !! | TTGTTCGGTTTTGTATCCTG+GGG | - | chr3_4:48021634-48021653 | Msa0504090:intron | 40.0% |
| ! | TAGAAGTTTTCCACCTTCTG+TGG | + | chr3_4:48021663-48021682 | None:intergenic | 40.0% |
| CAGAAGGTGGAAAACTTCTA+CGG | - | chr3_4:48021663-48021682 | Msa0504090:intron | 40.0% | |
| AAATTCTGGATTCAATGGCG+TGG | - | chr3_4:48021732-48021751 | Msa0504090:intron | 40.0% | |
| TCTCACCTTCAACCAATTAC+AGG | - | chr3_4:48021798-48021817 | Msa0504090:intron | 40.0% | |
| GATGTCCTGTAATTGGTTGA+AGG | + | chr3_4:48021806-48021825 | None:intergenic | 40.0% | |
| GGGAAATGATGTCCTGTAAT+TGG | + | chr3_4:48021813-48021832 | None:intergenic | 40.0% | |
| AATTGTACAGCAACCTTCGT+CGG | + | chr3_4:48021880-48021899 | None:intergenic | 40.0% | |
| !! | AACTCTGGTATTGATAGGGT+CGG | + | chr3_4:48021916-48021935 | None:intergenic | 40.0% |
| !! | GCATCAACTCTGGTATTGAT+AGG | + | chr3_4:48021921-48021940 | None:intergenic | 40.0% |
| AATGGTCTCAGTCTGTAATG+TGG | - | chr3_4:48022183-48022202 | Msa0504090:CDS | 40.0% | |
| TCTATGATTTCCATGTGACG+AGG | + | chr3_4:48022218-48022237 | None:intergenic | 40.0% | |
| ! | ACTTTCCAACATGCGCATTT+TGG | - | chr3_4:48022389-48022408 | Msa0504090:intron | 40.0% |
| ATTGTCCAAAATGCGCATGT+TGG | + | chr3_4:48022397-48022416 | None:intergenic | 40.0% | |
| AAATTTGCCATCCGAACAAC+TGG | + | chr3_4:48022432-48022451 | None:intergenic | 40.0% | |
| CATGTTGGGCCATCTATTAT+AGG | - | chr3_4:48022673-48022692 | Msa0504090:intron | 40.0% | |
| GGCCATCTATTATAGGTGAA+TGG | - | chr3_4:48022680-48022699 | Msa0504090:intron | 40.0% | |
| ! | GTGATTATTTGGCTTAGCTC+AGG | + | chr3_4:48022833-48022852 | None:intergenic | 40.0% |
| ACCTGTCAGTAAGTCAAGAT+CGG | + | chr3_4:48022885-48022904 | None:intergenic | 40.0% | |
| TTCATTGTCAGCAAACTGCA+GGG | + | chr3_4:48022995-48023014 | None:intergenic | 40.0% | |
| ACTGTACTCTATCATGCAGT+GGG | + | chr3_4:48023220-48023239 | None:intergenic | 40.0% | |
| AACTGTACTCTATCATGCAG+TGG | + | chr3_4:48023221-48023240 | None:intergenic | 40.0% | |
| ! | ATAGCTCTGTCCTTGAACAT+AGG | - | chr3_4:48023269-48023288 | Msa0504090:intron | 40.0% |
| GGCAACACTCAAATCTTTGA+AGG | + | chr3_4:48023347-48023366 | None:intergenic | 40.0% | |
| CCAAATTCATCCCTTTGTGT+CGG | - | chr3_4:48023486-48023505 | Msa0504090:intron | 40.0% | |
| GGGACACTTAAATCTTTGAG+AGG | - | chr3_4:48023646-48023665 | Msa0504090:CDS | 40.0% | |
| ! | GTTGTACTTTTCCGTTCTTC+AGG | + | chr3_4:48023835-48023854 | None:intergenic | 40.0% |
| TTCAAGTAGCTATTGACCAC+AGG | + | chr3_4:48023961-48023980 | None:intergenic | 40.0% | |
| TGTGGTCAATAGCTACTTGA+AGG | - | chr3_4:48023960-48023979 | Msa0504090:CDS | 40.0% | |
| CAAATTGTCATATCTGGTGG+TGG | - | chr3_4:48024070-48024089 | Msa0504090:intron | 40.0% | |
| GCACAAACACAACCTGAAAA+AGG | + | chr3_4:48024158-48024177 | None:intergenic | 40.0% | |
| GCCAAATTACAATGTATCGG+TGG | - | chr3_4:48024176-48024195 | Msa0504090:CDS | 40.0% | |
| GCCACCGATACATTGTAATT+TGG | + | chr3_4:48024180-48024199 | None:intergenic | 40.0% | |
| ATGGAGCTAATGTGGAAATC+AGG | - | chr3_4:48024319-48024338 | Msa0504090:intron | 40.0% | |
| TGGAGCTAATGTGGAAATCA+GGG | - | chr3_4:48024320-48024339 | Msa0504090:intron | 40.0% | |
| ATCCTGAAGTTCAAGGAACT+AGG | + | chr3_4:48024561-48024580 | None:intergenic | 40.0% | |
| CAAACAGATCCTGAAGTTCA+AGG | + | chr3_4:48024568-48024587 | None:intergenic | 40.0% | |
| CTTGAACTTCAGGATCTGTT+TGG | - | chr3_4:48024566-48024585 | Msa0504090:CDS | 40.0% | |
| AGAAGATGTAAGGGAAGCTA+GGG | + | chr3_4:48024944-48024963 | None:intergenic | 40.0% | |
| TTCTTTGCCTCTTCAAATCG+AGG | + | chr3_4:48025144-48025163 | None:intergenic | 40.0% | |
| ! | TTTATTAGGAGTGGGGTGTT+TGG | - | chr3_4:48025165-48025184 | Msa0504090:intron | 40.0% |
| CAACCCATTGCTTGATTCAT+TGG | - | chr3_4:48025200-48025219 | Msa0504090:intron | 40.0% | |
| CCTTCCAATGAATCAAGCAA+TGG | + | chr3_4:48025207-48025226 | None:intergenic | 40.0% | |
| CCATTGCTTGATTCATTGGA+AGG | - | chr3_4:48025204-48025223 | Msa0504090:intron | 40.0% | |
| CGTGGTGATTACTTTCTTGT+TGG | - | chr3_4:48025243-48025262 | Msa0504090:intron | 40.0% | |
| CAGCTAGGGAGAAAACTAAA+AGG | + | chr3_4:48025349-48025368 | None:intergenic | 40.0% | |
| GACAATTGCTCAGTATGCTA+AGG | - | chr3_4:48025875-48025894 | Msa0504090:intron | 40.0% | |
| CCAGCTGAAATTATGGTACA+CGG | + | chr3_4:48025923-48025942 | None:intergenic | 40.0% | |
| CAAGTCTCATTCTGTTTCAG+TGG | - | chr3_4:48026167-48026186 | Msa0504090:intron | 40.0% | |
| !! | GAAGAGACTAATGGTGATGG+TGG | - | chr3_4:48019332-48019351 | Msa0504090:intron | 45.0% |
| ACCTGCTGTTGCAAATCCAT+TGG | - | chr3_4:48019376-48019395 | Msa0504090:intron | 45.0% | |
| AGACAGTTTGGGAGAGCTTA+TGG | + | chr3_4:48019878-48019897 | None:intergenic | 45.0% | |
| GCGTACTTGTGAGACAGTTT+GGG | + | chr3_4:48019889-48019908 | None:intergenic | 45.0% | |
| AAGGATGCAGCACTAGGAAA+TGG | - | chr3_4:48020727-48020746 | Msa0504090:CDS | 45.0% | |
| ! | TAGGAAATGGTGGTCTTGGT+CGG | - | chr3_4:48020740-48020759 | Msa0504090:CDS | 45.0% |
| AATTTACCTGCTTGGGGGTA+TGG | - | chr3_4:48020799-48020818 | Msa0504090:CDS | 45.0% | |
| !! | TATGGTTTGAGGTACCGGTA+CGG | - | chr3_4:48020817-48020836 | Msa0504090:CDS | 45.0% |
| AATCGCAAAAGAAGGTCAGG+AGG | - | chr3_4:48020855-48020874 | Msa0504090:intron | 45.0% | |
| CCAAGGGCTAAACTTCTGTT+TGG | + | chr3_4:48020989-48021008 | None:intergenic | 45.0% | |
| CCAAACAGAAGTTTAGCCCT+TGG | - | chr3_4:48020986-48021005 | Msa0504090:intron | 45.0% | |
| TTAGCCCTTGGGAAATTGTG+AGG | - | chr3_4:48020998-48021017 | Msa0504090:intron | 45.0% | |
| CCTGGCCAAAGAATCTGATA+GGG | + | chr3_4:48021038-48021057 | None:intergenic | 45.0% | |
| ACCTGGCCAAAGAATCTGAT+AGG | + | chr3_4:48021039-48021058 | None:intergenic | 45.0% | |
| TCGAGGTTAACCCTAATGGA+AGG | - | chr3_4:48021058-48021077 | Msa0504090:CDS | 45.0% | |
| TATGCCAGCCGAAAATGGAT+TGG | - | chr3_4:48021191-48021210 | Msa0504090:intron | 45.0% | |
| ! | CTTCTCCGCCAATCCATTTT+CGG | + | chr3_4:48021202-48021221 | None:intergenic | 45.0% |
| GCTTATGATGTGCCAATTCC+TGG | - | chr3_4:48021236-48021255 | Msa0504090:intron | 45.0% | |
| !! | GTGTTCTTGGTTTGGTATCC+AGG | + | chr3_4:48021257-48021276 | None:intergenic | 45.0% |
| ! | GACTGATGGTGTTCTTGGTT+TGG | + | chr3_4:48021265-48021284 | None:intergenic | 45.0% |
| !! | ACTCTGGTATTGATAGGGTC+GGG | + | chr3_4:48021915-48021934 | None:intergenic | 45.0% |
| CTTATGGATGAAGAAGGGCT+TGG | - | chr3_4:48021946-48021965 | Msa0504090:CDS | 45.0% | |
| AGACCATTTCTCCAGTGCTT+CGG | + | chr3_4:48022171-48022190 | None:intergenic | 45.0% | |
| GAAATTGCTTCCTCGTCACA+TGG | - | chr3_4:48022205-48022224 | Msa0504090:CDS | 45.0% | |
| TTCACTCTCAAGATCCAGTC+GGG | + | chr3_4:48022370-48022389 | None:intergenic | 45.0% | |
| GTTCACTCTCAAGATCCAGT+CGG | + | chr3_4:48022371-48022390 | None:intergenic | 45.0% | |
| TCGGATGGCAAATTTGTGTG+TGG | - | chr3_4:48022437-48022456 | Msa0504090:intron | 45.0% | |
| ATGGCATTACACCTCGAAGA+TGG | - | chr3_4:48022792-48022811 | Msa0504090:CDS | 45.0% | |
| ACCGATCTTGACTTACTGAC+AGG | - | chr3_4:48022881-48022900 | Msa0504090:intron | 45.0% | |
| !! | GTTGCATGTAGAGAAGCATC+CGG | + | chr3_4:48022924-48022943 | None:intergenic | 45.0% |
| ACTGCAGGGAAAAAACACCA+GGG | + | chr3_4:48022981-48023000 | None:intergenic | 45.0% | |
| AACTGCAGGGAAAAAACACC+AGG | + | chr3_4:48022982-48023001 | None:intergenic | 45.0% | |
| CTTCATTGTCAGCAAACTGC+AGG | + | chr3_4:48022996-48023015 | None:intergenic | 45.0% | |
| ATGAAGATCTGCAAGCAGAG+TGG | - | chr3_4:48023010-48023029 | Msa0504090:intron | 45.0% | |
| !! | AGTACGTTCTGAAGGTGACA+GGG | - | chr3_4:48023070-48023089 | Msa0504090:CDS | 45.0% |
| CCGACACAAAGGGATGAATT+TGG | + | chr3_4:48023489-48023508 | None:intergenic | 45.0% | |
| CACTGTCATGATTGGAGGAA+AGG | - | chr3_4:48023861-48023880 | Msa0504090:intron | 45.0% | |
| TGCTAAACGGATAGTCAAGC+TGG | - | chr3_4:48023903-48023922 | Msa0504090:intron | 45.0% | |
| GTCAAGCTGGTCAATGATGT+TGG | - | chr3_4:48023916-48023935 | Msa0504090:intron | 45.0% | |
| TCCCAACATATTAGTACCGC+AGG | - | chr3_4:48024228-48024247 | Msa0504090:CDS | 45.0% | |
| GCCTGCGGTACTAATATGTT+GGG | + | chr3_4:48024232-48024251 | None:intergenic | 45.0% | |
| TGCCTGCGGTACTAATATGT+TGG | + | chr3_4:48024233-48024252 | None:intergenic | 45.0% | |
| ACATATTAGTACCGCAGGCA+TGG | - | chr3_4:48024233-48024252 | Msa0504090:CDS | 45.0% | |
| GTGGAAATCAGGGAAGAGAT+CGG | - | chr3_4:48024330-48024349 | Msa0504090:intron | 45.0% | |
| CACCTAGTTCCTTGAACTTC+AGG | - | chr3_4:48024556-48024575 | Msa0504090:CDS | 45.0% | |
| ! | ACTGACCCTTAGAGCTTGTT+TGG | + | chr3_4:48024745-48024764 | None:intergenic | 45.0% |
| GAGAAGATGTAAGGGAAGCT+AGG | + | chr3_4:48024945-48024964 | None:intergenic | 45.0% | |
| ! | GGAAATTCTGGTTATGGTCG+TGG | - | chr3_4:48025225-48025244 | Msa0504090:intron | 45.0% |
| TTATGACTTCCCAAGCTACG+TGG | - | chr3_4:48025266-48025285 | Msa0504090:intron | 45.0% | |
| CATGGTGCAGTGACAAGAAA+AGG | - | chr3_4:48025796-48025815 | Msa0504090:intron | 45.0% | |
| ! | ATCTTAAGTACTGCTGGGAG+TGG | - | chr3_4:48025834-48025853 | Msa0504090:intron | 45.0% |
| ! | TCTTAAGTACTGCTGGGAGT+GGG | - | chr3_4:48025835-48025854 | Msa0504090:intron | 45.0% |
| CCGTGTACCATAATTTCAGC+TGG | - | chr3_4:48025920-48025939 | Msa0504090:intron | 45.0% | |
| AGCAGATGCATTGAGAGAGA+GGG | + | chr3_4:48026050-48026069 | None:intergenic | 45.0% | |
| AAGCAGATGCATTGAGAGAG+AGG | + | chr3_4:48026051-48026070 | None:intergenic | 45.0% | |
| !!! | TTTTTAATTAAAAAGTATTA+TGG | + | chr3_4:48024699-48024718 | None:intergenic | 5.0% |
| ! | GCCAATGGATTTGCAACAGC+AGG | + | chr3_4:48019380-48019399 | None:intergenic | 50.0% |
| TGTTCGTGATCGTCTCGTTC+AGG | - | chr3_4:48019511-48019530 | Msa0504090:intron | 50.0% | |
| GGCGTACTTGTGAGACAGTT+TGG | + | chr3_4:48019890-48019909 | None:intergenic | 50.0% | |
| CAAGTACGCCAGAAAGCTGT+AGG | - | chr3_4:48019900-48019919 | Msa0504090:intron | 50.0% | |
| CGAGCCTTGACCAATGCTAT+TGG | - | chr3_4:48020423-48020442 | Msa0504090:intron | 50.0% | |
| GCTGATGCTTTGCGCAAGTT+CGG | - | chr3_4:48020471-48020490 | Msa0504090:intron | 50.0% | |
| CAGGAAAAGGATGCAGCACT+AGG | - | chr3_4:48020721-48020740 | Msa0504090:CDS | 50.0% | |
| GATGCAGCACTAGGAAATGG+TGG | - | chr3_4:48020730-48020749 | Msa0504090:CDS | 50.0% | |
| GCACTAGGAAATGGTGGTCT+TGG | - | chr3_4:48020736-48020755 | Msa0504090:CDS | 50.0% | |
| ! | TCGGCTTGCTTCTTGCTTTC+TGG | - | chr3_4:48020759-48020778 | Msa0504090:CDS | 50.0% |
| CGTGCCTCACAATTTCCCAA+GGG | + | chr3_4:48021005-48021024 | None:intergenic | 50.0% | |
| TCGTGCCTCACAATTTCCCA+AGG | + | chr3_4:48021006-48021025 | None:intergenic | 50.0% | |
| CCCTATCAGATTCTTTGGCC+AGG | - | chr3_4:48021035-48021054 | Msa0504090:intron | 50.0% | |
| CATTAGGGTTAACCTCGACC+TGG | + | chr3_4:48021056-48021075 | None:intergenic | 50.0% | |
| CAGGTCGAGGTTAACCCTAA+TGG | - | chr3_4:48021054-48021073 | Msa0504090:CDS | 50.0% | |
| GTGTGTATGCCAGCCGAAAA+TGG | - | chr3_4:48021186-48021205 | Msa0504090:intron | 50.0% | |
| ! | GCGAAGACTGATGGTGTTCT+TGG | + | chr3_4:48021270-48021289 | None:intergenic | 50.0% |
| ! | CACAAGCTTTAGCTTCCCAG+AGG | + | chr3_4:48021292-48021311 | None:intergenic | 50.0% |
| GGACATCATTTCCCGGTTCA+AGG | - | chr3_4:48021819-48021838 | Msa0504090:intron | 50.0% | |
| TCATTTCCCGGTTCAAGGAG+AGG | - | chr3_4:48021824-48021843 | Msa0504090:CDS | 50.0% | |
| AGCAACCTTCGTCGGAAACT+CGG | + | chr3_4:48021872-48021891 | None:intergenic | 50.0% | |
| !! | TGGTATTGATAGGGTCGGGT+GGG | + | chr3_4:48021911-48021930 | None:intergenic | 50.0% |
| TGGATGAAGAAGGGCTTGGA+TGG | - | chr3_4:48021950-48021969 | Msa0504090:CDS | 50.0% | |
| GGATGAAGAAGGGCTTGGAT+GGG | - | chr3_4:48021951-48021970 | Msa0504090:CDS | 50.0% | |
| GCTTGGATGGGATGAAGCAT+GGG | - | chr3_4:48021963-48021982 | Msa0504090:CDS | 50.0% | |
| !! | GCAGAACTTGTTGCGTTGTG+TGG | - | chr3_4:48022010-48022029 | Msa0504090:intron | 50.0% |
| ACCATTTCTCCAGTGCTTCG+GGG | + | chr3_4:48022169-48022188 | None:intergenic | 50.0% | |
| GACCATTTCTCCAGTGCTTC+GGG | + | chr3_4:48022170-48022189 | None:intergenic | 50.0% | |
| ATCCCCAGAAGCCAGTTGTT+CGG | - | chr3_4:48022418-48022437 | Msa0504090:intron | 50.0% | |
| ! | ATCCGAACAACTGGCTTCTG+GGG | + | chr3_4:48022423-48022442 | None:intergenic | 50.0% |
| ! | CATCCGAACAACTGGCTTCT+GGG | + | chr3_4:48022424-48022443 | None:intergenic | 50.0% |
| CTTACTGACAGGTCTTCGAG+AGG | - | chr3_4:48022892-48022911 | Msa0504090:intron | 50.0% | |
| AGAGTGGTCGTCTGCAAAGA+TGG | - | chr3_4:48023026-48023045 | Msa0504090:CDS | 50.0% | |
| GATGGCTAATAAGCAGCGCT+TGG | - | chr3_4:48023044-48023063 | Msa0504090:CDS | 50.0% | |
| CTTGGCACAGTACGTTCTGA+AGG | - | chr3_4:48023062-48023081 | Msa0504090:CDS | 50.0% | |
| !! | CAGTACGTTCTGAAGGTGAC+AGG | - | chr3_4:48023069-48023088 | Msa0504090:CDS | 50.0% |
| !! | GTACGTTCTGAAGGTGACAG+GGG | - | chr3_4:48023071-48023090 | Msa0504090:CDS | 50.0% |
| AGCGTATCCACGAGTACAAG+AGG | - | chr3_4:48023133-48023152 | Msa0504090:CDS | 50.0% | |
| AGGAGATGAGCCCTGAAGAA+CGG | - | chr3_4:48023821-48023840 | Msa0504090:intron | 50.0% | |
| ACTGCACGCACTGTCATGAT+TGG | - | chr3_4:48023853-48023872 | Msa0504090:intron | 50.0% | |
| ! | TTACAATGTATCGGTGGCGG+AGG | - | chr3_4:48024182-48024201 | Msa0504090:CDS | 50.0% |
| GTTGGGATAGCTCACTTCCT+GGG | + | chr3_4:48024215-48024234 | None:intergenic | 50.0% | |
| TGTTGGGATAGCTCACTTCC+TGG | + | chr3_4:48024216-48024235 | None:intergenic | 50.0% | |
| AATCAGGGAAGAGATCGGTG+AGG | - | chr3_4:48024335-48024354 | Msa0504090:intron | 50.0% | |
| ! | TTTCCTCTTTGGTGCGACAG+CGG | - | chr3_4:48024365-48024384 | Msa0504090:intron | 50.0% |
| TGATGTACCTCGACTGAGGA+AGG | - | chr3_4:48024389-48024408 | Msa0504090:intron | 50.0% | |
| TCTCTTTCCTTCCTCAGTCG+AGG | + | chr3_4:48024399-48024418 | None:intergenic | 50.0% | |
| TCGACTGAGGAAGGAAAGAG+AGG | - | chr3_4:48024398-48024417 | Msa0504090:intron | 50.0% | |
| CTGAGGAAGGAAAGAGAGGA+TGG | - | chr3_4:48024402-48024421 | Msa0504090:intron | 50.0% | |
| GAAGGAAAGAGAGGATGGAC+TGG | - | chr3_4:48024407-48024426 | Msa0504090:intron | 50.0% | |
| ! | ACCGGATCCTCGATTTGAAG+AGG | - | chr3_4:48025134-48025153 | Msa0504090:intron | 50.0% |
| GCCTCTTCAAATCGAGGATC+CGG | + | chr3_4:48025138-48025157 | None:intergenic | 50.0% | |
| GGTGCAGTGACAAGAAAAGG+TGG | - | chr3_4:48025799-48025818 | Msa0504090:intron | 50.0% | |
| TGGTCAAGGCTCGACCTTGA+AGG | + | chr3_4:48020416-48020435 | None:intergenic | 55.0% | |
| CTCAAACCATACCCCCAAGC+AGG | + | chr3_4:48020808-48020827 | None:intergenic | 55.0% | |
| ! | CTGCTTGGGGGTATGGTTTG+AGG | - | chr3_4:48020806-48020825 | Msa0504090:CDS | 55.0% |
| ! | GGGGGTATGGTTTGAGGTAC+CGG | - | chr3_4:48020812-48020831 | Msa0504090:CDS | 55.0% |
| AGGTCAGGAGGAAGTTGCTG+AGG | - | chr3_4:48020867-48020886 | Msa0504090:intron | 55.0% | |
| AGGAGGAAGTTGCTGAGGAC+TGG | - | chr3_4:48020872-48020891 | Msa0504090:intron | 55.0% | |
| CAGATTCTTTGGCCAGGTCG+AGG | - | chr3_4:48021041-48021060 | Msa0504090:intron | 55.0% | |
| !! | GCCAGCCGAAAATGGATTGG+CGG | - | chr3_4:48021194-48021213 | Msa0504090:intron | 55.0% |
| ! | TCCGCCAATCCATTTTCGGC+TGG | + | chr3_4:48021198-48021217 | None:intergenic | 55.0% |
| ACACCATCAGTCTTCGCCTC+TGG | - | chr3_4:48021273-48021292 | Msa0504090:intron | 55.0% | |
| CACCATCAGTCTTCGCCTCT+GGG | - | chr3_4:48021274-48021293 | Msa0504090:intron | 55.0% | |
| TTCCCAGAGGCGAAGACTGA+TGG | + | chr3_4:48021279-48021298 | None:intergenic | 55.0% | |
| GCTTCACTCACGAGCTCAAC+AGG | - | chr3_4:48021367-48021386 | Msa0504090:intron | 55.0% | |
| TATCCTGGGGATGCCACAGA+AGG | - | chr3_4:48021647-48021666 | Msa0504090:intron | 55.0% | |
| TTTCCCGGTTCAAGGAGAGG+AGG | - | chr3_4:48021827-48021846 | Msa0504090:CDS | 55.0% | |
| GGAAACTCGGACCAGTTCCA+AGG | + | chr3_4:48021859-48021878 | None:intergenic | 55.0% | |
| !! | CTGGTATTGATAGGGTCGGG+TGG | + | chr3_4:48021912-48021931 | None:intergenic | 55.0% |
| GGCTTGGATGGGATGAAGCA+TGG | - | chr3_4:48021962-48021981 | Msa0504090:CDS | 55.0% | |
| TGGATGGGATGAAGCATGGG+AGG | - | chr3_4:48021966-48021985 | Msa0504090:CDS | 55.0% | |
| ATTTCTCCAGTGCTTCGGGG+AGG | + | chr3_4:48022166-48022185 | None:intergenic | 55.0% | |
| !! | TCCCCGAAGCACTGGAGAAA+TGG | - | chr3_4:48022165-48022184 | Msa0504090:CDS | 55.0% |
| ! | CCATCCGAACAACTGGCTTC+TGG | + | chr3_4:48022425-48022444 | None:intergenic | 55.0% |
| CCAGAAGCCAGTTGTTCGGA+TGG | - | chr3_4:48022422-48022441 | Msa0504090:intron | 55.0% | |
| GGTCTTCGAGAGGTGAGTAC+CGG | - | chr3_4:48022902-48022921 | Msa0504090:intron | 55.0% | |
| GTAGCTGCCTCTTGTACTCG+TGG | + | chr3_4:48023143-48023162 | None:intergenic | 55.0% | |
| GCACGCACTGTCATGATTGG+AGG | - | chr3_4:48023856-48023875 | Msa0504090:intron | 55.0% | |
| CGGATGATGTACCTCGACTG+AGG | - | chr3_4:48024385-48024404 | Msa0504090:intron | 55.0% | |
| CCTGAGCATCCACGTAGCTT+GGG | + | chr3_4:48025278-48025297 | None:intergenic | 55.0% | |
| TCCTGAGCATCCACGTAGCT+TGG | + | chr3_4:48025279-48025298 | None:intergenic | 55.0% | |
| GTGGGAAGTTCAGCAGTGAC+AGG | - | chr3_4:48025853-48025872 | Msa0504090:intron | 55.0% | |
| !! | AGTTGCTGAGGACTGGCTCG+AGG | - | chr3_4:48020879-48020898 | Msa0504090:intron | 60.0% |
| CTGCCTCCTCTCCTTGAACC+GGG | + | chr3_4:48021833-48021852 | None:intergenic | 60.0% | |
| CCTGCCTCCTCTCCTTGAAC+CGG | + | chr3_4:48021834-48021853 | None:intergenic | 60.0% | |
| CGGTTCAAGGAGAGGAGGCA+GGG | - | chr3_4:48021832-48021851 | Msa0504090:CDS | 60.0% | |
| CTGGTCCGAGTTTCCGACGA+AGG | - | chr3_4:48021864-48021883 | Msa0504090:CDS | 60.0% | |
| ACCGCAGGCATGGAAGCAAG+TGG | - | chr3_4:48024243-48024262 | Msa0504090:CDS | 60.0% | |
| GCCACTTGCTTCCATGCCTG+CGG | + | chr3_4:48024247-48024266 | None:intergenic | 60.0% | |
| CATCCGCTGTCGCACCAAAG+AGG | + | chr3_4:48024371-48024390 | None:intergenic | 60.0% | |
| CCCAAGCTACGTGGATGCTC+AGG | - | chr3_4:48025275-48025294 | Msa0504090:intron | 60.0% | |
| CCACCTTCTGTGGCATCCCC+AGG | + | chr3_4:48021653-48021672 | None:intergenic | 65.0% | |
| CCTGGGGATGCCACAGAAGG+TGG | - | chr3_4:48021650-48021669 | Msa0504090:intron | 65.0% | |
| CCGGTTCAAGGAGAGGAGGC+AGG | - | chr3_4:48021831-48021850 | Msa0504090:CDS | 65.0% | |
| AGGAGAGGAGGCAGGGACCT+TGG | - | chr3_4:48021839-48021858 | Msa0504090:CDS | 65.0% | |
| GGAGGCAGGGACCTTGGAAC+TGG | - | chr3_4:48021845-48021864 | Msa0504090:CDS | 65.0% | |
| CACTGTCCTCCCCGAAGCAC+TGG | - | chr3_4:48022157-48022176 | Msa0504090:CDS | 65.0% | |
| !! | GTGGCGGAGGTGCTTATCCC+AGG | - | chr3_4:48024195-48024214 | Msa0504090:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 48018803 | 48026220 | 48018803 | ID=Msa0504090;Name=Msa0504090 |
| chr3_4 | mRNA | 48018803 | 48026220 | 48018803 | ID=Msa0504090-mRNA-1;Parent=Msa0504090;Name=Msa0504090-mRNA-1;_AED=0.13;_eAED=0.13;_QI=70|1|1|1|0.93|0.87|16|288|842 |
| chr3_4 | exon | 48018803 | 48019217 | 48018803 | ID=Msa0504090-mRNA-1:exon:10367;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48019704 | 48019894 | 48019704 | ID=Msa0504090-mRNA-1:exon:10366;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48020595 | 48020858 | 48020595 | ID=Msa0504090-mRNA-1:exon:10365;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48021042 | 48021200 | 48021042 | ID=Msa0504090-mRNA-1:exon:10364;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48021820 | 48022023 | 48021820 | ID=Msa0504090-mRNA-1:exon:10363;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48022110 | 48022328 | 48022110 | ID=Msa0504090-mRNA-1:exon:10362;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48022550 | 48022678 | 48022550 | ID=Msa0504090-mRNA-1:exon:10361;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48022770 | 48022887 | 48022770 | ID=Msa0504090-mRNA-1:exon:10360;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48023025 | 48023203 | 48023025 | ID=Msa0504090-mRNA-1:exon:10359;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48023299 | 48023391 | 48023299 | ID=Msa0504090-mRNA-1:exon:10358;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48023635 | 48023824 | 48023635 | ID=Msa0504090-mRNA-1:exon:10357;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48023944 | 48024029 | 48023944 | ID=Msa0504090-mRNA-1:exon:10356;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48024123 | 48024299 | 48024123 | ID=Msa0504090-mRNA-1:exon:10355;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48024502 | 48024681 | 48024502 | ID=Msa0504090-mRNA-1:exon:10354;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48025491 | 48025725 | 48025491 | ID=Msa0504090-mRNA-1:exon:10353;Parent=Msa0504090-mRNA-1 |
| chr3_4 | exon | 48026173 | 48026220 | 48026173 | ID=Msa0504090-mRNA-1:exon:10352;Parent=Msa0504090-mRNA-1 |
| chr3_4 | five_prime_UTR | 48026173 | 48026220 | 48026173 | ID=Msa0504090-mRNA-1:five_prime_utr;Parent=Msa0504090-mRNA-1 |
| chr3_4 | five_prime_UTR | 48025704 | 48025725 | 48025704 | ID=Msa0504090-mRNA-1:five_prime_utr;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48025491 | 48025703 | 48025491 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48024502 | 48024681 | 48024502 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48024123 | 48024299 | 48024123 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48023944 | 48024029 | 48023944 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48023635 | 48023824 | 48023635 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48023299 | 48023391 | 48023299 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48023025 | 48023203 | 48023025 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48022770 | 48022887 | 48022770 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48022550 | 48022678 | 48022550 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48022110 | 48022328 | 48022110 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48021820 | 48022023 | 48021820 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48021042 | 48021200 | 48021042 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48020595 | 48020858 | 48020595 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48019704 | 48019894 | 48019704 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | CDS | 48019091 | 48019217 | 48019091 | ID=Msa0504090-mRNA-1:cds;Parent=Msa0504090-mRNA-1 |
| chr3_4 | three_prime_UTR | 48018803 | 48019090 | 48018803 | ID=Msa0504090-mRNA-1:three_prime_utr;Parent=Msa0504090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
