Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456760 | XP_013460123.1 | 99.167 | 840 | 7 | 0 | 1 | 840 | 1 | 840 | 0.0 | 1735 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456760 | sp|P53537|PHSH_VICFA | 94.774 | 842 | 42 | 1 | 1 | 840 | 1 | 842 | 0.0 | 1665 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456760 | A0A072UWD1 | 99.167 | 840 | 7 | 0 | 1 | 840 | 1 | 840 | 0.0 | 1735 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014410 | Msa0456760 | 0.824442 | 8.053225e-54 | -8.615850e-47 |
| Msa0035290 | Msa0456760 | 0.842876 | 1.977683e-58 | -8.615850e-47 |
| Msa0035400 | Msa0456760 | 0.823905 | 1.076674e-53 | -8.615850e-47 |
| Msa0044180 | Msa0456760 | 0.838818 | 2.294233e-57 | -8.615850e-47 |
| Msa0090860 | Msa0456760 | 0.825182 | 5.387515e-54 | -8.615850e-47 |
| Msa0154270 | Msa0456760 | 0.846635 | 1.919354e-59 | -8.615850e-47 |
| Msa0166570 | Msa0456760 | 0.813900 | 2.025105e-51 | -8.615850e-47 |
| Msa0176040 | Msa0456760 | 0.821608 | 3.688499e-53 | -8.615850e-47 |
| Msa0183560 | Msa0456760 | 0.819557 | 1.091209e-52 | -8.615850e-47 |
| Msa0197030 | Msa0456760 | 0.822158 | 2.750522e-53 | -8.615850e-47 |
| Msa0364780 | Msa0456760 | 0.994291 | 4.574241e-206 | -8.615850e-47 |
| Msa0379100 | Msa0456760 | 0.830119 | 3.514095e-55 | -8.615850e-47 |
| Msa0392050 | Msa0456760 | 0.816445 | 5.509530e-52 | -8.615850e-47 |
| Msa0412190 | Msa0456760 | 0.918833 | 9.559390e-87 | -8.615850e-47 |
| Msa0412250 | Msa0456760 | 0.960748 | 6.570162e-119 | -8.615850e-47 |
| Msa0428730 | Msa0456760 | 0.828972 | 6.676622e-55 | -8.615850e-47 |
| Msa0437550 | Msa0456760 | 0.802298 | 5.995422e-49 | -8.615850e-47 |
| Msa0456760 | Msa0465800 | 0.807228 | 5.601508e-50 | -8.615850e-47 |
| Msa0456760 | Msa0469950 | 0.816852 | 4.466172e-52 | -8.615850e-47 |
| Msa0456760 | Msa0475090 | 0.802616 | 5.154421e-49 | -8.615850e-47 |
| Msa0456760 | Msa0481490 | 0.814328 | 1.629270e-51 | -8.615850e-47 |
| Msa0456760 | Msa0504090 | 0.993839 | 1.335831e-202 | -8.615850e-47 |
| Msa0456760 | Msa0570680 | 0.827189 | 1.794863e-54 | -8.615850e-47 |
| Msa0456760 | Msa0605250 | 0.803835 | 2.883135e-49 | -8.615850e-47 |
| Msa0456760 | Msa0610970 | 0.803729 | 3.033364e-49 | -8.615850e-47 |
| Msa0456760 | Msa0651310 | 0.801563 | 8.486638e-49 | -8.615850e-47 |
| Msa0456760 | Msa0740210 | 0.802442 | 5.599940e-49 | -8.615850e-47 |
| Msa0456760 | Msa0746980 | 0.821598 | 3.708329e-53 | -8.615850e-47 |
| Msa0456760 | Msa0781390 | 0.811313 | 7.451681e-51 | -8.615850e-47 |
| Msa0456760 | Msa0790640 | 0.817108 | 3.911514e-52 | -8.615850e-47 |
| Msa0456760 | Msa0818550 | 0.801779 | 7.665796e-49 | -8.615850e-47 |
| Msa0456760 | Msa0860920 | 0.805878 | 1.078911e-49 | -8.615850e-47 |
| Msa0456760 | Msa0928940 | 0.818711 | 1.699782e-52 | -8.615850e-47 |
| Msa0456760 | Msa0956910 | 0.801893 | 7.264150e-49 | -8.615850e-47 |
| Msa0456760 | Msa1031150 | 0.839095 | 1.944747e-57 | -8.615850e-47 |
| Msa0456760 | Msa1070250 | 0.834636 | 2.672513e-56 | -8.615850e-47 |
| Msa0456760 | Msa1071640 | 0.856913 | 2.332074e-62 | -8.615850e-47 |
| Msa0456760 | Msa1117510 | 0.810682 | 1.020787e-50 | -8.615850e-47 |
| Msa0456760 | Msa1119570 | 0.859437 | 4.138261e-63 | -8.615850e-47 |
| Msa0456760 | Msa1137940 | 0.864766 | 9.597598e-65 | -8.615850e-47 |
| Msa0456760 | Msa1144730 | 0.816845 | 4.482815e-52 | -8.615850e-47 |
| Msa0456760 | Msa1158090 | 0.883655 | 3.732076e-71 | -8.615850e-47 |
| Msa0456760 | Msa1161210 | 0.841296 | 5.179325e-58 | -8.615850e-47 |
| Msa0456760 | Msa1178120 | 0.807626 | 4.610040e-50 | -8.615850e-47 |
| Msa0456760 | Msa1180050 | 0.884709 | 1.521005e-71 | -8.615850e-47 |
| Msa0456760 | Msa1198720 | 0.848375 | 6.379112e-60 | -8.615850e-47 |
| Msa0456760 | Msa1232270 | 0.859274 | 4.630998e-63 | -8.615850e-47 |
| Msa0456760 | Msa1239900 | 0.801832 | 7.474899e-49 | -8.615850e-47 |
| Msa0456760 | Msa1252300 | 0.872461 | 3.124309e-67 | -8.615850e-47 |
| Msa0456760 | Msa1270770 | 0.883980 | 2.833731e-71 | -8.615850e-47 |
| Msa0456760 | Msa1281270 | 0.820296 | 7.392717e-53 | -8.615850e-47 |
| Msa0456760 | Msa1292960 | 0.818214 | 2.203255e-52 | -8.615850e-47 |
| Msa0456760 | Msa1313050 | 0.807377 | 5.206427e-50 | -8.615850e-47 |
| Msa0456760 | Msa1320380 | 0.815249 | 1.018287e-51 | -8.615850e-47 |
| Msa0456760 | Msa1386060 | -0.804064 | 2.584334e-49 | -8.615850e-47 |
| Msa0238860 | Msa0456760 | 0.806726 | 7.150594e-50 | -8.615850e-47 |
| Msa0253160 | Msa0456760 | 0.809105 | 2.229870e-50 | -8.615850e-47 |
| Msa0276590 | Msa0456760 | 0.828167 | 1.044949e-54 | -8.615850e-47 |
| Msa0291940 | Msa0456760 | 0.804828 | 1.790812e-49 | -8.615850e-47 |
| Msa0344680 | Msa0456760 | 0.817737 | 2.824022e-52 | -8.615850e-47 |
| Msa0358290 | Msa0456760 | 0.801942 | 7.094664e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456760 | MtrunA17_Chr3g0103771 | 99.167 | 840 | 7 | 0 | 1 | 840 | 1 | 840 | 0.0 | 1735 |
| Msa0456760 | MtrunA17_Chr2g0282731 | 48.783 | 822 | 403 | 10 | 24 | 840 | 180 | 988 | 0.0 | 809 |
| Msa0456760 | MtrunA17_Chr6g0454411 | 66.418 | 402 | 134 | 1 | 440 | 840 | 576 | 977 | 0.0 | 584 |
| Msa0456760 | MtrunA17_Chr6g0454411 | 62.019 | 416 | 152 | 3 | 24 | 434 | 90 | 504 | 4.00e-177 | 536 |
| Msa0456760 | MtrunA17_Chr4g0043041 | 66.176 | 408 | 136 | 2 | 435 | 840 | 574 | 981 | 0.0 | 582 |
| Msa0456760 | MtrunA17_Chr4g0043041 | 56.044 | 455 | 194 | 3 | 16 | 464 | 71 | 525 | 4.03e-173 | 526 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0456760 | AT3G46970.1 | 83.035 | 837 | 138 | 2 | 8 | 840 | 5 | 841 | 0.0 | 1470 |
| Msa0456760 | AT3G29320.1 | 60.388 | 876 | 290 | 6 | 22 | 840 | 87 | 962 | 0.0 | 1100 |
Find 236 sgRNAs with CRISPR-Local
Find 465 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGCTTGCTTCTTGCTTTC+TGG | 0.078572 | 3_3:-50940207 | Msa0456760:CDS |
| TCAATATATCACTGTGTAAT+TGG | 0.122849 | 3_3:+50938255 | None:intergenic |
| CTCAGTATGCTAAGGAAATT+TGG | 0.156164 | 3_3:-50935083 | Msa0456760:CDS |
| TTAACCACTTAGTGATTATT+TGG | 0.195969 | 3_3:+50938123 | None:intergenic |
| AAGAGGCAAAGAAGTTTATT+AGG | 0.200703 | 3_3:-50935814 | Msa0456760:CDS |
| ACTTTCCAACATGCGCATTT+TGG | 0.216640 | 3_3:-50938575 | Msa0456760:CDS |
| CCATCCGAACAACTGGCTTC+TGG | 0.226210 | 3_3:+50938542 | None:intergenic |
| GCCACCGATACATTGTAATT+TGG | 0.237509 | 3_3:+50936788 | None:intergenic |
| TTGAATGGGTGCCTTATTAT+AGG | 0.250074 | 3_3:-50936677 | Msa0456760:CDS |
| GACCATTTCTCCAGTGCTTC+GGG | 0.261697 | 3_3:+50938797 | None:intergenic |
| AACACTTAATTTACCTGCTT+GGG | 0.262521 | 3_3:-50940174 | Msa0456760:CDS |
| TGAATGTCAAATAGAGTATC+AGG | 0.269003 | 3_3:+50937859 | None:intergenic |
| GATTCATTGGAAGGAAATTC+TGG | 0.270874 | 3_3:-50935752 | Msa0456760:CDS |
| GTCCATTACAAATACCAATT+TGG | 0.272735 | 3_3:+50934821 | None:intergenic |
| TTGCAAATTATGTTTCAATA+TGG | 0.291770 | 3_3:-50938220 | Msa0456760:CDS |
| CAACCCATTGCTTGATTCAT+TGG | 0.306445 | 3_3:-50935765 | Msa0456760:CDS |
| TTTACACTTACCTTCCATTA+GGG | 0.309550 | 3_3:+50939898 | None:intergenic |
| ATTTGCTTAGCCTTCCAAAT+TGG | 0.310648 | 3_3:-50934835 | Msa0456760:three_prime_UTR |
| ATTTACACTTACCTTCCATT+AGG | 0.314637 | 3_3:+50939897 | None:intergenic |
| AGAGTTGATGCGTTTACTTA+TGG | 0.314885 | 3_3:-50939034 | Msa0456760:CDS |
| GTGTGTATGCCAGCCGAAAA+TGG | 0.331791 | 3_3:-50939780 | Msa0456760:intron |
| CATCTAAAGTACCTATAATA+AGG | 0.332291 | 3_3:+50936666 | None:intergenic |
| GCTTATGATGTGCCAATTCC+TGG | 0.336675 | 3_3:-50939730 | Msa0456760:CDS |
| GCGAAGACTGATGGTGTTCT+TGG | 0.337746 | 3_3:+50939699 | None:intergenic |
| CCTGCCTCCTCTCCTTGAAC+CGG | 0.339166 | 3_3:+50939133 | None:intergenic |
| GTGTTCTTGGTTTGGTATCC+AGG | 0.343283 | 3_3:+50939712 | None:intergenic |
| ATGGAGCTAATGTGGAAATC+AGG | 0.343321 | 3_3:-50936646 | Msa0456760:CDS |
| GCATCAACTCTGGTATTGAT+AGG | 0.348225 | 3_3:+50939046 | None:intergenic |
| TTGGAAGGAAATTCTGGTTA+TGG | 0.355039 | 3_3:-50935746 | Msa0456760:CDS |
| TTGGTTTGGTATCCAGGAAT+TGG | 0.357731 | 3_3:+50939718 | None:intergenic |
| TTGTACCCTATCAGATTCTT+TGG | 0.358703 | 3_3:-50939936 | Msa0456760:CDS |
| CATCCGAACAACTGGCTTCT+GGG | 0.363739 | 3_3:+50938543 | None:intergenic |
| TTTGAAGGAATGTAGTTGTT+TGG | 0.365878 | 3_3:+50942139 | None:intergenic |
| AGACCATTTCTCCAGTGCTT+CGG | 0.373578 | 3_3:+50938796 | None:intergenic |
| AACATGAAATTTGCTTTGAA+TGG | 0.374053 | 3_3:-50936692 | Msa0456760:CDS |
| TTCCAAATTGGTATTTGTAA+TGG | 0.376585 | 3_3:-50934823 | Msa0456760:three_prime_UTR |
| TTTATTAGGAGTGGGGTGTT+TGG | 0.376904 | 3_3:-50935800 | Msa0456760:CDS |
| GCCTCTTCAAATCGAGGATC+CGG | 0.386133 | 3_3:+50935830 | None:intergenic |
| GCAAAGAAGTTTATTAGGAG+TGG | 0.386572 | 3_3:-50935809 | Msa0456760:CDS |
| CAACACTTAATTTACCTGCT+TGG | 0.390154 | 3_3:-50940175 | Msa0456760:CDS |
| AAATTTGCCATCCGAACAAC+TGG | 0.392112 | 3_3:+50938535 | None:intergenic |
| ATGTCTATCTTAAGTACTGC+TGG | 0.395817 | 3_3:-50935138 | Msa0456760:CDS |
| CGTGGTGATTACTTTCTTGT+TGG | 0.397265 | 3_3:-50935722 | Msa0456760:CDS |
| ACACCATCAGTCTTCGCCTC+TGG | 0.401475 | 3_3:-50939693 | Msa0456760:CDS |
| GCTTCACTCACGAGCTCAAC+AGG | 0.402172 | 3_3:-50939599 | Msa0456760:intron |
| CTTATTATAGGTACTTTAGA+TGG | 0.405360 | 3_3:-50936665 | Msa0456760:CDS |
| CGAGCCTTGACCAATGCTAT+TGG | 0.405477 | 3_3:-50940543 | Msa0456760:CDS |
| TTCTTGCTTTCTGGATTCCA+TGG | 0.411344 | 3_3:-50940198 | Msa0456760:CDS |
| CGACTTACACAAATGCTAAA+CGG | 0.415136 | 3_3:-50937075 | Msa0456760:CDS |
| GACTGATGGTGTTCTTGGTT+TGG | 0.418565 | 3_3:+50939704 | None:intergenic |
| TGTTGGGATAGCTCACTTCC+TGG | 0.419593 | 3_3:+50936752 | None:intergenic |
| TCCTGAGCATCCACGTAGCT+TGG | 0.420103 | 3_3:+50935689 | None:intergenic |
| TCCCCGAAGCACTGGAGAAA+TGG | 0.420397 | 3_3:-50938799 | Msa0456760:CDS |
| CCACCTTCTGTGGCATCCCC+AGG | 0.425804 | 3_3:+50939314 | None:intergenic |
| ACCTGGCCAAAGAATCTGAT+AGG | 0.427402 | 3_3:+50939930 | None:intergenic |
| TGTTCGTGATCGTCTCGTTC+AGG | 0.427671 | 3_3:-50941466 | Msa0456760:intron |
| CAATATATCACTGTGTAATT+GGG | 0.428524 | 3_3:+50938256 | None:intergenic |
| CACTGTCCTCCCCGAAGCAC+TGG | 0.430389 | 3_3:-50938807 | Msa0456760:CDS |
| GATAAGTAGTAAGTTTGCTT+GGG | 0.432852 | 3_3:+50940585 | None:intergenic |
| TGATAAGTAGTAAGTTTGCT+TGG | 0.439266 | 3_3:+50940584 | None:intergenic |
| CTCACTCTCACTTGAGGTTG+AGG | 0.439777 | 3_3:-50942200 | Msa0456760:five_prime_UTR |
| CAAAGAAGTTTATTAGGAGT+GGG | 0.443416 | 3_3:-50935808 | Msa0456760:CDS |
| GGACATCATTTCCCGGTTCA+AGG | 0.446314 | 3_3:-50939145 | Msa0456760:CDS |
| AAGTTCCAAAATAAAACTAA+TGG | 0.448080 | 3_3:-50938191 | Msa0456760:CDS |
| GTGATTATTTGGCTTAGCTC+AGG | 0.450262 | 3_3:+50938134 | None:intergenic |
| AATTACAGGACATCATTTCC+CGG | 0.450355 | 3_3:-50939152 | Msa0456760:intron |
| GATGTATCCAGCTGAAATTA+TGG | 0.450675 | 3_3:+50935039 | None:intergenic |
| GCTGATGCTTTGCGCAAGTT+CGG | 0.450707 | 3_3:-50940495 | Msa0456760:CDS |
| ATGTTAGAAGCAATCTCATC+AGG | 0.454704 | 3_3:+50941570 | None:intergenic |
| TTATCAATGGAGTTCCTTCA+AGG | 0.457142 | 3_3:-50940567 | Msa0456760:CDS |
| AGGAGGAAGTTGCTGAGGAC+TGG | 0.459433 | 3_3:-50940094 | Msa0456760:CDS |
| CCTGAGCATCCACGTAGCTT+GGG | 0.460185 | 3_3:+50935690 | None:intergenic |
| CTTCCAATGAATCAAGCAAT+GGG | 0.462569 | 3_3:+50935762 | None:intergenic |
| GCTAGTGGATTTGCCACAGC+TGG | 0.463141 | 3_3:+50941600 | None:intergenic |
| CACCATCAGTCTTCGCCTCT+GGG | 0.463304 | 3_3:-50939692 | Msa0456760:CDS |
| ACTGCACGCACTGTCATGAT+TGG | 0.464857 | 3_3:-50937112 | Msa0456760:CDS |
| CTTATGGATGAAGAAGGGCT+TGG | 0.467886 | 3_3:-50939018 | Msa0456760:CDS |
| AGGAGAGGAGGCAGGGACCT+TGG | 0.468311 | 3_3:-50939125 | Msa0456760:CDS |
| CCGGTTCAAGGAGAGGAGGC+AGG | 0.470005 | 3_3:-50939133 | Msa0456760:CDS |
| GCACTAGGAAATGGTGGTCT+TGG | 0.471328 | 3_3:-50940230 | Msa0456760:CDS |
| CCATTGCTTGATTCATTGGA+AGG | 0.471435 | 3_3:-50935761 | Msa0456760:CDS |
| GCCTGCGGTACTAATATGTT+GGG | 0.473266 | 3_3:+50936736 | None:intergenic |
| TGGTCAAGGCTCGACCTTGA+AGG | 0.476017 | 3_3:+50940553 | None:intergenic |
| CCCAAGCTACGTGGATGCTC+AGG | 0.476610 | 3_3:-50935690 | Msa0456760:CDS |
| GTAGCATTTAAACTTTCTGA+TGG | 0.476727 | 3_3:+50934763 | None:intergenic |
| ATTCAAATTTCCAATAGCAT+TGG | 0.479715 | 3_3:+50940533 | None:intergenic |
| CCTTCCAATGAATCAAGCAA+TGG | 0.482739 | 3_3:+50935761 | None:intergenic |
| ACATGAAATTTGCTTTGAAT+GGG | 0.484003 | 3_3:-50936691 | Msa0456760:CDS |
| CCCTATCAGATTCTTTGGCC+AGG | 0.486248 | 3_3:-50939931 | Msa0456760:CDS |
| ATCCCCAGAAGCCAGTTGTT+CGG | 0.488192 | 3_3:-50938546 | Msa0456760:CDS |
| CGTTTACTTATGGATGAAGA+AGG | 0.488789 | 3_3:-50939024 | Msa0456760:CDS |
| TGTGGTCAATAGCTACTTGA+AGG | 0.489084 | 3_3:-50937005 | Msa0456760:intron |
| GGCTTGGATGGGATGAAGCA+TGG | 0.489941 | 3_3:-50939002 | Msa0456760:CDS |
| CAGGTCGAGGTTAACCCTAA+TGG | 0.489967 | 3_3:-50939912 | Msa0456760:CDS |
| TTGTGATTTGAAGTTCAAAC+CGG | 0.490504 | 3_3:-50935849 | Msa0456760:intron |
| GGAGGCAGGGACCTTGGAAC+TGG | 0.491790 | 3_3:-50939119 | Msa0456760:CDS |
| AGAGTGGTCGTCTGCAAAGA+TGG | 0.498113 | 3_3:-50937938 | Msa0456760:CDS |
| TTCACTCTCAAGATCCAGTC+GGG | 0.498449 | 3_3:+50938597 | None:intergenic |
| GAAGGAAAGAGAGGATGGAC+TGG | 0.498810 | 3_3:-50936558 | Msa0456760:intron |
| CAAACAGAAGTTTAGCCCTT+GGG | 0.500543 | 3_3:-50939979 | Msa0456760:intron |
| TGCCTGCGGTACTAATATGT+TGG | 0.500593 | 3_3:+50936735 | None:intergenic |
| CAGTACGTTCTGAAGGTGAC+AGG | 0.500818 | 3_3:-50937895 | Msa0456760:CDS |
| CCAAACAGAAGTTTAGCCCT+TGG | 0.504145 | 3_3:-50939980 | Msa0456760:intron |
| TGGATGAAGAAGGGCTTGGA+TGG | 0.504963 | 3_3:-50939014 | Msa0456760:CDS |
| GTGGCGGAGGTGCTTATCCC+AGG | 0.507556 | 3_3:-50936770 | Msa0456760:CDS |
| AGCAACCTTCGTCGGAAACT+CGG | 0.508546 | 3_3:+50939095 | None:intergenic |
| GCAAACTTACTACTTATCAA+TGG | 0.509704 | 3_3:-50940580 | Msa0456760:CDS |
| GATAATCGCAAAAGAAGGTC+AGG | 0.510735 | 3_3:-50940114 | Msa0456760:CDS |
| CCGTGTACCATAATTTCAGC+TGG | 0.513087 | 3_3:-50935046 | Msa0456760:exon |
| CAGATTCTTTGGCCAGGTCG+AGG | 0.513698 | 3_3:-50939925 | Msa0456760:CDS |
| ATCTTAAGTACTGCTGGGAG+TGG | 0.515688 | 3_3:-50935132 | Msa0456760:CDS |
| AAGGATGCAGCACTAGGAAA+TGG | 0.519194 | 3_3:-50940239 | Msa0456760:CDS |
| CCTGGGGATGCCACAGAAGG+TGG | 0.519394 | 3_3:-50939314 | Msa0456760:CDS |
| GGCCATCTATTATAGGTGAA+TGG | 0.521441 | 3_3:-50938284 | Msa0456760:intron |
| TGGAGCTAATGTGGAAATCA+GGG | 0.523433 | 3_3:-50936645 | Msa0456760:CDS |
| GTGGGAAGTTCAGCAGTGAC+AGG | 0.524513 | 3_3:-50935113 | Msa0456760:CDS |
| CAGGAAAAGGATGCAGCACT+AGG | 0.524810 | 3_3:-50940245 | Msa0456760:CDS |
| TGCTAAACGGATAGTCAAGC+TGG | 0.525169 | 3_3:-50937062 | Msa0456760:CDS |
| TGTGTTATAGGAGAAAGATA+AGG | 0.527121 | 3_3:-50941683 | Msa0456760:intron |
| GGTTCTAAAGTAGAGACTAA+TGG | 0.527890 | 3_3:-50941648 | Msa0456760:CDS |
| CAAGTCTCATTCTGTTTCAG+TGG | 0.529577 | 3_3:-50934799 | Msa0456760:three_prime_UTR |
| CACTGTCATGATTGGAGGAA+AGG | 0.529940 | 3_3:-50937104 | Msa0456760:CDS |
| ATGTGTCTCACTCTCACTTG+AGG | 0.529995 | 3_3:-50942206 | Msa0456760:five_prime_UTR |
| TTCCCAGAGGCGAAGACTGA+TGG | 0.530304 | 3_3:+50939690 | None:intergenic |
| ACATATTAGTACCGCAGGCA+TGG | 0.531917 | 3_3:-50936732 | Msa0456760:CDS |
| TTCTTTGCCTCTTCAAATCG+AGG | 0.532927 | 3_3:+50935824 | None:intergenic |
| ACTCTGGTATTGATAGGGTC+GGG | 0.533523 | 3_3:+50939052 | None:intergenic |
| AAACAGATAATCGCAAAAGA+AGG | 0.533857 | 3_3:-50940119 | Msa0456760:CDS |
| GCACGCACTGTCATGATTGG+AGG | 0.535278 | 3_3:-50937109 | Msa0456760:CDS |
| TACTTTAGATGGAGCTAATG+TGG | 0.537773 | 3_3:-50936654 | Msa0456760:CDS |
| TTACAATGTATCGGTGGCGG+AGG | 0.537864 | 3_3:-50936783 | Msa0456760:CDS |
| ACACTTAATTTACCTGCTTG+GGG | 0.538160 | 3_3:-50940173 | Msa0456760:CDS |
| ATATACTTCTCATGAATGCA+AGG | 0.538334 | 3_3:+50935016 | None:intergenic |
| ATAAGTAAACGCATCAACTC+TGG | 0.539867 | 3_3:+50939036 | None:intergenic |
| TGTTCAAGCTCAAACTTGAA+AGG | 0.539884 | 3_3:+50941513 | None:intergenic |
| GGAAATTCTGGTTATGGTCG+TGG | 0.539921 | 3_3:-50935740 | Msa0456760:CDS |
| GCCAGCCGAAAATGGATTGG+CGG | 0.540426 | 3_3:-50939772 | Msa0456760:intron |
| AACTCTGGTATTGATAGGGT+CGG | 0.542303 | 3_3:+50939051 | None:intergenic |
| GCTTGGATGGGATGAAGCAT+GGG | 0.543851 | 3_3:-50939001 | Msa0456760:CDS |
| ATGGCATTACACCTCGAAGA+TGG | 0.545189 | 3_3:-50938172 | Msa0456760:CDS |
| CAGAAGGTGGAAAACTTCTA+CGG | 0.546061 | 3_3:-50939301 | Msa0456760:CDS |
| GATGGCTAATAAGCAGCGCT+TGG | 0.548918 | 3_3:-50937920 | Msa0456760:CDS |
| ACCGATCTTGACTTACTGAC+AGG | 0.549416 | 3_3:-50938083 | Msa0456760:CDS |
| CTGCCTCCTCTCCTTGAACC+GGG | 0.550039 | 3_3:+50939134 | None:intergenic |
| TCCCAACATATTAGTACCGC+AGG | 0.550701 | 3_3:-50936737 | Msa0456760:CDS |
| ATTACAAATACCAATTTGGA+AGG | 0.551227 | 3_3:+50934825 | None:intergenic |
| ACTTGAAGAAATAACCGAGC+AGG | 0.556341 | 3_3:-50940466 | Msa0456760:intron |
| CATGGTGCAGTGACAAGAAA+AGG | 0.556413 | 3_3:-50935170 | Msa0456760:intron |
| CTGAGGAAGGAAAGAGAGGA+TGG | 0.557425 | 3_3:-50936563 | Msa0456760:CDS |
| AAGCAGATGCATTGAGAGAG+AGG | 0.557628 | 3_3:+50934918 | None:intergenic |
| GACAATTGCTCAGTATGCTA+AGG | 0.558452 | 3_3:-50935091 | Msa0456760:CDS |
| TAGGAAATGGTGGTCTTGGT+CGG | 0.558516 | 3_3:-50940226 | Msa0456760:CDS |
| AGCAGATGCATTGAGAGAGA+GGG | 0.558561 | 3_3:+50934919 | None:intergenic |
| ATTGTCCAAAATGCGCATGT+TGG | 0.561027 | 3_3:+50938570 | None:intergenic |
| TGATGTACCTCGACTGAGGA+AGG | 0.561412 | 3_3:-50936576 | Msa0456760:CDS |
| GAAATTGCTTCCTCGTCACA+TGG | 0.561842 | 3_3:-50938759 | Msa0456760:CDS |
| GTAGCTGCCTCTTGTACTCG+TGG | 0.562138 | 3_3:+50937824 | None:intergenic |
| ATCCGAACAACTGGCTTCTG+GGG | 0.563192 | 3_3:+50938544 | None:intergenic |
| CATCAACTCTGGTATTGATA+GGG | 0.569093 | 3_3:+50939047 | None:intergenic |
| AAAGAAGTTTATTAGGAGTG+GGG | 0.569398 | 3_3:-50935807 | Msa0456760:CDS |
| TCATTTCCCGGTTCAAGGAG+AGG | 0.571549 | 3_3:-50939140 | Msa0456760:CDS |
| GCATACGTGAAGATATTTGA+AGG | 0.572648 | 3_3:+50942124 | None:intergenic |
| TAAGCCAAATAATCACTAAG+TGG | 0.573231 | 3_3:-50938127 | Msa0456760:CDS |
| AGCGTATCCACGAGTACAAG+AGG | 0.573947 | 3_3:-50937831 | Msa0456760:CDS |
| GGATGAAGAAGGGCTTGGAT+GGG | 0.574485 | 3_3:-50939013 | Msa0456760:CDS |
| CACTTAATTTACCTGCTTGG+GGG | 0.574585 | 3_3:-50940172 | Msa0456760:CDS |
| TGTCTATCTTAAGTACTGCT+GGG | 0.576462 | 3_3:-50935137 | Msa0456760:CDS |
| ACCTGTCAGTAAGTCAAGAT+CGG | 0.576769 | 3_3:+50938082 | None:intergenic |
| AATGATAAGTAAAACCCGAC+TGG | 0.577293 | 3_3:-50938611 | Msa0456760:CDS |
| AGGTAAATTAAGTGTTGCCA+TGG | 0.577786 | 3_3:+50940181 | None:intergenic |
| CGGTTCAAGGAGAGGAGGCA+GGG | 0.579612 | 3_3:-50939132 | Msa0456760:CDS |
| CATTAGGGTTAACCTCGACC+TGG | 0.581641 | 3_3:+50939913 | None:intergenic |
| AATTGTACAGCAACCTTCGT+CGG | 0.581739 | 3_3:+50939087 | None:intergenic |
| TCTGTTTAAATAGTCCGTAC+CGG | 0.582859 | 3_3:+50940135 | None:intergenic |
| AGGTCAGGAGGAAGTTGCTG+AGG | 0.588335 | 3_3:-50940099 | Msa0456760:CDS |
| CATCCGCTGTCGCACCAAAG+AGG | 0.589453 | 3_3:+50936597 | None:intergenic |
| GTTGGGATAGCTCACTTCCT+GGG | 0.589645 | 3_3:+50936753 | None:intergenic |
| TTTCCTCTTTGGTGCGACAG+CGG | 0.590527 | 3_3:-50936600 | Msa0456760:CDS |
| ATTTCCAATAGCATTGGTCA+AGG | 0.590725 | 3_3:+50940539 | None:intergenic |
| AAATTACAATGTATCGGTGG+CGG | 0.590929 | 3_3:-50936786 | Msa0456760:CDS |
| CCAGAAGCCAGTTGTTCGGA+TGG | 0.591835 | 3_3:-50938542 | Msa0456760:CDS |
| AGTGAGGACTATACTGAGCA+TGG | 0.592114 | 3_3:+50941541 | None:intergenic |
| AATCGCAAAAGAAGGTCAGG+AGG | 0.592795 | 3_3:-50940111 | Msa0456760:CDS |
| AGGAGATGAGCCCTGAAGAA+CGG | 0.597395 | 3_3:-50937144 | Msa0456760:CDS |
| TCTCTTTCCTTCCTCAGTCG+AGG | 0.597849 | 3_3:+50936569 | None:intergenic |
| TCGTGCCTCACAATTTCCCA+AGG | 0.598830 | 3_3:+50939963 | None:intergenic |
| TTCTGCTAAAGTTCCAGCTG+TGG | 0.599697 | 3_3:-50941613 | Msa0456760:CDS |
| GGAAACTCGGACCAGTTCCA+AGG | 0.600518 | 3_3:+50939108 | None:intergenic |
| AGTTGCTGAGGACTGGCTCG+AGG | 0.600739 | 3_3:-50940087 | Msa0456760:intron |
| GTCAAGCTGGTCAATGATGT+TGG | 0.601373 | 3_3:-50937049 | Msa0456760:CDS |
| TTAGCCCTTGGGAAATTGTG+AGG | 0.601926 | 3_3:-50939968 | Msa0456760:CDS |
| TATCCTGGGGATGCCACAGA+AGG | 0.602412 | 3_3:-50939317 | Msa0456760:CDS |
| GTTTACTTATGGATGAAGAA+GGG | 0.604886 | 3_3:-50939023 | Msa0456760:CDS |
| CTGGTCCGAGTTTCCGACGA+AGG | 0.604965 | 3_3:-50939100 | Msa0456760:CDS |
| CCAGCTGAAATTATGGTACA+CGG | 0.605531 | 3_3:+50935046 | None:intergenic |
| TTCAAGTAGCTATTGACCAC+AGG | 0.606557 | 3_3:+50937007 | None:intergenic |
| ACCGGATCCTCGATTTGAAG+AGG | 0.608188 | 3_3:-50935831 | Msa0456760:CDS |
| AATGGTCTCAGTCTGTAATG+TGG | 0.608222 | 3_3:-50938781 | Msa0456760:CDS |
| TCTTAAGTACTGCTGGGAGT+GGG | 0.611052 | 3_3:-50935131 | Msa0456760:CDS |
| ACACAGTGATATATTGAAGT+CGG | 0.612649 | 3_3:-50938249 | Msa0456760:CDS |
| TGGTATTGATAGGGTCGGGT+GGG | 0.615079 | 3_3:+50939056 | None:intergenic |
| CTTGGCACAGTACGTTCTGA+AGG | 0.618440 | 3_3:-50937902 | Msa0456760:CDS |
| GTGGAAATCAGGGAAGAGAT+CGG | 0.619019 | 3_3:-50936635 | Msa0456760:CDS |
| TATGGTTTGAGGTACCGGTA+CGG | 0.619433 | 3_3:-50940149 | Msa0456760:CDS |
| CTGGTATTGATAGGGTCGGG+TGG | 0.620002 | 3_3:+50939055 | None:intergenic |
| TATGCCAGCCGAAAATGGAT+TGG | 0.620660 | 3_3:-50939775 | Msa0456760:intron |
| GCCACTTGCTTCCATGCCTG+CGG | 0.621602 | 3_3:+50936721 | None:intergenic |
| AGTACGTTCTGAAGGTGACA+GGG | 0.624712 | 3_3:-50937894 | Msa0456760:CDS |
| TGTGCCAAATTACAATGTAT+CGG | 0.631942 | 3_3:-50936792 | Msa0456760:CDS |
| TGGATGGGATGAAGCATGGG+AGG | 0.633226 | 3_3:-50938998 | Msa0456760:CDS |
| ACCATTTCTCCAGTGCTTCG+GGG | 0.634093 | 3_3:+50938798 | None:intergenic |
| CCTGGCCAAAGAATCTGATA+GGG | 0.634245 | 3_3:+50939931 | None:intergenic |
| TATACTTCTCATGAATGCAA+GGG | 0.636811 | 3_3:+50935017 | None:intergenic |
| GATGCAGCACTAGGAAATGG+TGG | 0.643582 | 3_3:-50940236 | Msa0456760:CDS |
| TCGGATGGCAAATTTGTGTG+TGG | 0.644056 | 3_3:-50938527 | Msa0456760:CDS |
| GAATGTCAAATAGAGTATCA+GGG | 0.648034 | 3_3:+50937860 | None:intergenic |
| GTTCACTCTCAAGATCCAGT+CGG | 0.648340 | 3_3:+50938596 | None:intergenic |
| TCGAGGTTAACCCTAATGGA+AGG | 0.648776 | 3_3:-50939908 | Msa0456760:intron |
| TTATGACTTCCCAAGCTACG+TGG | 0.654121 | 3_3:-50935699 | Msa0456760:CDS |
| TCGACTGAGGAAGGAAAGAG+AGG | 0.654363 | 3_3:-50936567 | Msa0456760:CDS |
| TTTCCCGGTTCAAGGAGAGG+AGG | 0.656952 | 3_3:-50939137 | Msa0456760:CDS |
| ACCGCAGGCATGGAAGCAAG+TGG | 0.664367 | 3_3:-50936722 | Msa0456760:CDS |
| ATTTCTCCAGTGCTTCGGGG+AGG | 0.665090 | 3_3:+50938801 | None:intergenic |
| GGTGCAGTGACAAGAAAAGG+TGG | 0.675521 | 3_3:-50935167 | Msa0456760:intron |
| CGTGCCTCACAATTTCCCAA+GGG | 0.676969 | 3_3:+50939964 | None:intergenic |
| GCCAAATTACAATGTATCGG+TGG | 0.679301 | 3_3:-50936789 | Msa0456760:CDS |
| TCTATGATTTCCATGTGACG+AGG | 0.683452 | 3_3:+50938749 | None:intergenic |
| CACAAGCTTTAGCTTCCCAG+AGG | 0.688674 | 3_3:+50939677 | None:intergenic |
| CGGATGATGTACCTCGACTG+AGG | 0.697248 | 3_3:-50936580 | Msa0456760:CDS |
| TCTAAAGTAGAGACTAATGG+TGG | 0.700647 | 3_3:-50941645 | Msa0456760:CDS |
| ATGAAGATCTGCAAGCAGAG+TGG | 0.702272 | 3_3:-50937954 | Msa0456760:CDS |
| CTTACTGACAGGTCTTCGAG+AGG | 0.704813 | 3_3:-50938072 | Msa0456760:intron |
| TATTGTAAACAGTGATCCTG+TGG | 0.708804 | 3_3:-50937023 | Msa0456760:CDS |
| AACTTGAAAGGTGAAAAGTG+AGG | 0.718109 | 3_3:+50941525 | None:intergenic |
| GTACGTTCTGAAGGTGACAG+GGG | 0.729253 | 3_3:-50937893 | Msa0456760:CDS |
| AATCAGGGAAGAGATCGGTG+AGG | 0.747097 | 3_3:-50936630 | Msa0456760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAGAGATTATAATAAA+AGG | + | chr3_3:50934902-50934921 | None:intergenic | 15.0% |
| !!! | TTTTTCATTTTTTTCTTACT+TGG | - | chr3_3:50935068-50935087 | Msa0456760:CDS | 15.0% |
| !!! | ATTTTTCATTTTTGTGTTAT+AGG | - | chr3_3:50935282-50935301 | Msa0456760:intron | 15.0% |
| !!! | AATTTAAAGCTAATTAACTA+AGG | - | chr3_3:50936168-50936187 | Msa0456760:intron | 15.0% |
| !!! | ATTTAAAGCTAATTAACTAA+GGG | - | chr3_3:50936169-50936188 | Msa0456760:intron | 15.0% |
| !!! | ATATAAAAGTACTTATAGTT+TGG | - | chr3_3:50937175-50937194 | Msa0456760:intron | 15.0% |
| !!! | GATTTATTTTTATTCAATGA+TGG | - | chr3_3:50937334-50937353 | Msa0456760:intron | 15.0% |
| !! | TTTCACAAATAATATAAAGA+GGG | + | chr3_3:50938639-50938658 | None:intergenic | 15.0% |
| !! | ATTTCACAAATAATATAAAG+AGG | + | chr3_3:50938640-50938659 | None:intergenic | 15.0% |
| !! | AAATTTATTTACTTCATGTT+GGG | - | chr3_3:50938672-50938691 | Msa0456760:intron | 15.0% |
| !!! | ATTTGGTAAACATTATTTTA+AGG | + | chr3_3:50939451-50939470 | None:intergenic | 15.0% |
| !!! | AAACAATGAATATATTTTGA+TGG | - | chr3_3:50940649-50940668 | Msa0456760:intron | 15.0% |
| !! | AAATATAAAAAGGAAAATGT+GGG | + | chr3_3:50940786-50940805 | None:intergenic | 15.0% |
| !! | AAAATATAAAAAGGAAAATG+TGG | + | chr3_3:50940787-50940806 | None:intergenic | 15.0% |
| !!! | CGTTTTAAAAAATTAGAAAA+TGG | + | chr3_3:50940857-50940876 | None:intergenic | 15.0% |
| !!! | TAAGTGTATATATTGTTTTT+TGG | - | chr3_3:50941775-50941794 | Msa0456760:intron | 15.0% |
| !! | AAGTTGAATAATTGAAGAAA+TGG | + | chr3_3:50934927-50934946 | None:intergenic | 20.0% |
| !!! | TATATAAAGTTTCCATTTTG+TGG | - | chr3_3:50935018-50935037 | Msa0456760:three_prime_UTR | 20.0% |
| !!! | TTTTGTGACAATTTGATTAA+TGG | - | chr3_3:50935142-50935161 | Msa0456760:CDS | 20.0% |
| !! | TTTGTGACAATTTGATTAAT+GGG | - | chr3_3:50935143-50935162 | Msa0456760:CDS | 20.0% |
| !!! | TTTTTCATTTTTCTCTTACT+TGG | - | chr3_3:50935176-50935195 | Msa0456760:intron | 20.0% |
| !!! | TTTTCATTTTTCTCTTACTT+GGG | - | chr3_3:50935177-50935196 | Msa0456760:intron | 20.0% |
| !!! | TTTTGTGACAATTTGATTAA+TGG | - | chr3_3:50935142-50935161 | Msa0456760:CDS | 20.0% |
| !! | TTTGTGACAATTTGATTAAT+GGG | - | chr3_3:50935143-50935162 | Msa0456760:CDS | 20.0% |
| !! | AAAGATAAGGATTTGAAAAA+TGG | - | chr3_3:50935307-50935326 | Msa0456760:intron | 20.0% |
| !! | AAGATAAGGATTTGAAAAAT+GGG | - | chr3_3:50935308-50935327 | Msa0456760:intron | 20.0% |
| !! | TATATGATGATACATTTACT+TGG | - | chr3_3:50935534-50935553 | Msa0456760:intron | 20.0% |
| !! | AAAGAAGTAAAAAAGGTAAA+AGG | + | chr3_3:50936042-50936061 | None:intergenic | 20.0% |
| !!! | TTTGTTCTGAAATCTTATAA+TGG | + | chr3_3:50937514-50937533 | None:intergenic | 20.0% |
| !!! | ATTTGTTTTGTAGATTTGTT+CGG | - | chr3_3:50937632-50937651 | Msa0456760:intron | 20.0% |
| !! | AAATAATATAAAGAGGGTTA+TGG | + | chr3_3:50938633-50938652 | None:intergenic | 20.0% |
| !! | GAAATTTATTTACTTCATGT+TGG | - | chr3_3:50938671-50938690 | Msa0456760:intron | 20.0% |
| !! | TTGCAAATTATGTTTCAATA+TGG | - | chr3_3:50938757-50938776 | Msa0456760:CDS | 20.0% |
| !! | AAGTTCCAAAATAAAACTAA+TGG | - | chr3_3:50938786-50938805 | Msa0456760:CDS | 20.0% |
| !!! | TAATGCCATTAGTTTTATTT+TGG | + | chr3_3:50938794-50938813 | None:intergenic | 20.0% |
| !! | CTATAGATATAAAAAGTTGA+AGG | - | chr3_3:50939195-50939214 | Msa0456760:intron | 20.0% |
| !!! | CATTATTTTAAGGATTGATA+TGG | + | chr3_3:50939441-50939460 | None:intergenic | 20.0% |
| !! | TTAGTACCTCTAAATAAATT+TGG | - | chr3_3:50939530-50939549 | Msa0456760:intron | 20.0% |
| !!! | TTTTCACCAAATTTATTTAG+AGG | + | chr3_3:50939539-50939558 | None:intergenic | 20.0% |
| !!! | TTTGGTGAAAAATATTTTGA+AGG | - | chr3_3:50939548-50939567 | Msa0456760:intron | 20.0% |
| !! | ATTTCTGCAAATTTATTTAG+AGG | + | chr3_3:50939617-50939636 | None:intergenic | 20.0% |
| !!! | CATATTTTTCATAAAATGCT+GGG | + | chr3_3:50939776-50939795 | None:intergenic | 20.0% |
| !!! | TCATATTTTTCATAAAATGC+TGG | + | chr3_3:50939777-50939796 | None:intergenic | 20.0% |
| !! | TTGTGATGATATGTTTATTA+AGG | - | chr3_3:50940117-50940136 | Msa0456760:CDS | 20.0% |
| !!! | AAAAAAATGACATTTTTTGC+AGG | + | chr3_3:50940604-50940623 | None:intergenic | 20.0% |
| !!! | CCACTTTTAAAATTTTGTAT+CGG | + | chr3_3:50940678-50940697 | None:intergenic | 20.0% |
| !!! | CGATACAAAATTTTAAAAGT+GGG | - | chr3_3:50940676-50940695 | Msa0456760:intron | 20.0% |
| !!! | GATACAAAATTTTAAAAGTG+GGG | - | chr3_3:50940677-50940696 | Msa0456760:intron | 20.0% |
| !! | GTTGAAGTGAAAATATAAAA+AGG | + | chr3_3:50940796-50940815 | None:intergenic | 20.0% |
| !!! | AAAGAAACTGAAGTATTTTT+AGG | - | chr3_3:50941050-50941069 | Msa0456760:intron | 20.0% |
| !!! | AGTATTTTTAGGAAGTAAAT+AGG | - | chr3_3:50941061-50941080 | Msa0456760:intron | 20.0% |
| !! | CAATCATTATGCAAATATTA+GGG | + | chr3_3:50941087-50941106 | None:intergenic | 20.0% |
| !! | ACAATCATTATGCAAATATT+AGG | + | chr3_3:50941088-50941107 | None:intergenic | 20.0% |
| !! | TTACTAAAATAACGTCTAAT+AGG | + | chr3_3:50941448-50941467 | None:intergenic | 20.0% |
| !! | ATTAGATGTGATATAAAACT+TGG | + | chr3_3:50941565-50941584 | None:intergenic | 20.0% |
| !! | CTTGAATTTGTAAAATAGTT+TGG | + | chr3_3:50941620-50941639 | None:intergenic | 20.0% |
| !!! | AAACAGTTTGATTTAATTAG+TGG | + | chr3_3:50941675-50941694 | None:intergenic | 20.0% |
| !!! | ATACACTTACGATAATTTTA+TGG | + | chr3_3:50941764-50941783 | None:intergenic | 20.0% |
| ! | ATGATACATTTACTTGGAAT+TGG | - | chr3_3:50935540-50935559 | Msa0456760:intron | 25.0% |
| ! | AATAATCATTTGTGTGTCAA+TGG | - | chr3_3:50935591-50935610 | Msa0456760:intron | 25.0% |
| ! | TGCTTTAGTTATAGCTATAA+TGG | - | chr3_3:50935673-50935692 | Msa0456760:CDS | 25.0% |
| !!! | GTTTTTTATGAAAACATACC+AGG | + | chr3_3:50935718-50935737 | None:intergenic | 25.0% |
| ! | GTCACATAAAGAAGTAAAAA+AGG | + | chr3_3:50936049-50936068 | None:intergenic | 25.0% |
| ! | GATGATAATTATTTCAGCAA+TGG | - | chr3_3:50936336-50936355 | Msa0456760:intron | 25.0% |
| ! | ATTCAAATTTCCAATAGCAT+TGG | + | chr3_3:50936447-50936466 | None:intergenic | 25.0% |
| !! | GAAGTGATTTGGATTTATAA+AGG | + | chr3_3:50936642-50936661 | None:intergenic | 25.0% |
| ! | AAATATGTCATACACTTTCA+TGG | + | chr3_3:50936945-50936964 | None:intergenic | 25.0% |
| !!! | AAAATAGTTTTACACTGCTT+TGG | - | chr3_3:50937120-50937139 | Msa0456760:CDS | 25.0% |
| ! | AGGATACAACAAAATTCAAT+AGG | + | chr3_3:50937538-50937557 | None:intergenic | 25.0% |
| ! | ATGTTTGATTCTTCTTTACA+GGG | + | chr3_3:50937581-50937600 | None:intergenic | 25.0% |
| ! | AATGTTTGATTCTTCTTTAC+AGG | + | chr3_3:50937582-50937601 | None:intergenic | 25.0% |
| ! | TTTAATATGAAACTGCTTCA+CGG | + | chr3_3:50937610-50937629 | None:intergenic | 25.0% |
| !! | AATCCAGAATTTAACTTACT+TGG | + | chr3_3:50937737-50937756 | None:intergenic | 25.0% |
| ! | AAGTTAAATTCTGGATTCAA+TGG | - | chr3_3:50937740-50937759 | Msa0456760:intron | 25.0% |
| ! | CAATCTAGAAAGAAAGAAAA+TGG | + | chr3_3:50938061-50938080 | None:intergenic | 25.0% |
| !!! | AGCATCATATTTTAGCAATA+AGG | + | chr3_3:50938116-50938135 | None:intergenic | 25.0% |
| ! | TTTCTCCAAATACACTTATA+AGG | - | chr3_3:50938549-50938568 | Msa0456760:CDS | 25.0% |
| ! | ATCAACCTTATAAGTGTATT+TGG | + | chr3_3:50938557-50938576 | None:intergenic | 25.0% |
| ! | CAATATATCACTGTGTAATT+GGG | + | chr3_3:50938724-50938743 | None:intergenic | 25.0% |
| ! | TCAATATATCACTGTGTAAT+TGG | + | chr3_3:50938725-50938744 | None:intergenic | 25.0% |
| !!! | GTTTTATTTTGGAACTTTGT+TGG | + | chr3_3:50938783-50938802 | None:intergenic | 25.0% |
| ! | TTAACCACTTAGTGATTATT+TGG | + | chr3_3:50938857-50938876 | None:intergenic | 25.0% |
| ! | TGTTAGAATGTTTCAATAAC+AGG | + | chr3_3:50938965-50938984 | None:intergenic | 25.0% |
| !! | TGTCAATTTTGAACTTTTGA+GGG | + | chr3_3:50939478-50939497 | None:intergenic | 25.0% |
| ! | TTTGCAGAAATATAGTTTGA+AGG | - | chr3_3:50939626-50939645 | Msa0456760:CDS | 25.0% |
| ! | ATAGTTTGAAGGACTAATAT+AGG | - | chr3_3:50939637-50939656 | Msa0456760:CDS | 25.0% |
| ! | TAGTTTGAAGGACTAATATA+GGG | - | chr3_3:50939638-50939657 | Msa0456760:CDS | 25.0% |
| ! | AATGGTTTCTCTATAGATTA+GGG | + | chr3_3:50939726-50939745 | None:intergenic | 25.0% |
| ! | AAATGGTTTCTCTATAGATT+AGG | + | chr3_3:50939727-50939746 | None:intergenic | 25.0% |
| !! | AAAAAGTGTAATCCTTCAAA+TGG | + | chr3_3:50939744-50939763 | None:intergenic | 25.0% |
| ! | CCTATATTGTTACAGTTATA+AGG | + | chr3_3:50939816-50939835 | None:intergenic | 25.0% |
| ! | CCTTATAACTGTAACAATAT+AGG | - | chr3_3:50939813-50939832 | Msa0456760:intron | 25.0% |
| !! | AACATGAAATTTGCTTTGAA+TGG | - | chr3_3:50940285-50940304 | Msa0456760:intron | 25.0% |
| !! | ACATGAAATTTGCTTTGAAT+GGG | - | chr3_3:50940286-50940305 | Msa0456760:intron | 25.0% |
| !! | CATCTAAAGTACCTATAATA+AGG | + | chr3_3:50940314-50940333 | None:intergenic | 25.0% |
| ! | CTTATTATAGGTACTTTAGA+TGG | - | chr3_3:50940312-50940331 | Msa0456760:intron | 25.0% |
| !!! | CTGTATAAAATTTTGACAAC+AGG | + | chr3_3:50940628-50940647 | None:intergenic | 25.0% |
| !! | CTGTTGTCAAAATTTTATAC+AGG | - | chr3_3:50940626-50940645 | Msa0456760:CDS | 25.0% |
| !!! | CCGATACAAAATTTTAAAAG+TGG | - | chr3_3:50940675-50940694 | Msa0456760:intron | 25.0% |
| ! | TTAACCATAATAAACAGCTA+GGG | + | chr3_3:50941374-50941393 | None:intergenic | 25.0% |
| ! | TTTAACCATAATAAACAGCT+AGG | + | chr3_3:50941375-50941394 | None:intergenic | 25.0% |
| ! | TATTATGGTTAAAGTCAGTT+TGG | - | chr3_3:50941382-50941401 | Msa0456760:intron | 25.0% |
| ! | TTAGTAAAACTCTAGATGTA+TGG | - | chr3_3:50941461-50941480 | Msa0456760:intron | 25.0% |
| !!! | ATTGATTTTAACTTCCAATC+TGG | - | chr3_3:50941499-50941518 | Msa0456760:CDS | 25.0% |
| ! | ATTACAAATACCAATTTGGA+AGG | + | chr3_3:50942155-50942174 | None:intergenic | 25.0% |
| ! | TTCCAAATTGGTATTTGTAA+TGG | - | chr3_3:50942154-50942173 | Msa0456760:five_prime_UTR | 25.0% |
| ! | TATCTTTTGATACTCTTTCG+TGG | - | chr3_3:50934815-50934834 | Msa0456760:three_prime_UTR | 30.0% |
| TTTGAAGGAATGTAGTTGTT+TGG | + | chr3_3:50934841-50934860 | None:intergenic | 30.0% | |
| ATAATCGAATTGCCACAAAA+TGG | + | chr3_3:50935033-50935052 | None:intergenic | 30.0% | |
| ! | TTTTGTGGCAATTCGATTAT+TGG | - | chr3_3:50935033-50935052 | Msa0456760:three_prime_UTR | 30.0% |
| TTTGTGGCAATTCGATTATT+GGG | - | chr3_3:50935034-50935053 | Msa0456760:three_prime_UTR | 30.0% | |
| TGTGTTATAGGAGAAAGATA+AGG | - | chr3_3:50935294-50935313 | Msa0456760:intron | 30.0% | |
| GTTATAGCTATAATGGTCAT+TGG | - | chr3_3:50935680-50935699 | Msa0456760:CDS | 30.0% | |
| CAGGATAGCTTATATGAATA+CGG | + | chr3_3:50935813-50935832 | None:intergenic | 30.0% | |
| ATCATACCAACAATTTGACT+TGG | - | chr3_3:50935987-50936006 | Msa0456760:intron | 30.0% | |
| CAATACAAGTATACTAACCT+AGG | + | chr3_3:50936280-50936299 | None:intergenic | 30.0% | |
| CTAGGTTAGTATACTTGTAT+TGG | - | chr3_3:50936278-50936297 | Msa0456760:intron | 30.0% | |
| !! | GTATACTTGTATTGGTTGTT+TGG | - | chr3_3:50936286-50936305 | Msa0456760:intron | 30.0% |
| ! | GATAAGTAGTAAGTTTGCTT+GGG | + | chr3_3:50936395-50936414 | None:intergenic | 30.0% |
| ! | TGATAAGTAGTAAGTTTGCT+TGG | + | chr3_3:50936396-50936415 | None:intergenic | 30.0% |
| GCAAACTTACTACTTATCAA+TGG | - | chr3_3:50936397-50936416 | Msa0456760:intron | 30.0% | |
| TCCAAATCACTTCATATCTA+TGG | - | chr3_3:50936649-50936668 | Msa0456760:CDS | 30.0% | |
| ACCATAGATATGAAGTGATT+TGG | + | chr3_3:50936653-50936672 | None:intergenic | 30.0% | |
| CTGCAAAGATTCATGTTAAA+AGG | + | chr3_3:50936715-50936734 | None:intergenic | 30.0% | |
| ! | CTTTTAACATGAATCTTTGC+AGG | - | chr3_3:50936713-50936732 | Msa0456760:CDS | 30.0% |
| AACACTTAATTTACCTGCTT+GGG | - | chr3_3:50936803-50936822 | Msa0456760:CDS | 30.0% | |
| AAACAGATAATCGCAAAAGA+AGG | - | chr3_3:50936858-50936877 | Msa0456760:intron | 30.0% | |
| TTTACACTTACCTTCCATTA+GGG | + | chr3_3:50937082-50937101 | None:intergenic | 30.0% | |
| ATTTACACTTACCTTCCATT+AGG | + | chr3_3:50937083-50937102 | None:intergenic | 30.0% | |
| ! | GTGAATTTTGAATCTTGTTC+AGG | - | chr3_3:50937410-50937429 | Msa0456760:intron | 30.0% |
| ACTCCAAGTAAGTTAAATTC+TGG | - | chr3_3:50937731-50937750 | Msa0456760:intron | 30.0% | |
| GTTTACTTATGGATGAAGAA+GGG | - | chr3_3:50937954-50937973 | Msa0456760:CDS | 30.0% | |
| TATGATGCTATATCTTAACC+AGG | - | chr3_3:50938127-50938146 | Msa0456760:CDS | 30.0% | |
| GAGTTTATTGAAGAGAAACA+AGG | + | chr3_3:50938287-50938306 | None:intergenic | 30.0% | |
| TCTTCAATAAACTCAGTGAA+AGG | - | chr3_3:50938293-50938312 | Msa0456760:intron | 30.0% | |
| AGTGTATTTGGAGAAATTAG+AGG | + | chr3_3:50938545-50938564 | None:intergenic | 30.0% | |
| TCAACCATGAAAAAACTAGA+TGG | + | chr3_3:50938598-50938617 | None:intergenic | 30.0% | |
| ACACAGTGATATATTGAAGT+CGG | - | chr3_3:50938728-50938747 | Msa0456760:intron | 30.0% | |
| TAAGCCAAATAATCACTAAG+TGG | - | chr3_3:50938850-50938869 | Msa0456760:intron | 30.0% | |
| AGTGGTTAAAAACTGATAAG+TGG | - | chr3_3:50938868-50938887 | Msa0456760:intron | 30.0% | |
| GTGGTTAAAAACTGATAAGT+GGG | - | chr3_3:50938869-50938888 | Msa0456760:intron | 30.0% | |
| ! | GAATGTCAAATAGAGTATCA+GGG | + | chr3_3:50939120-50939139 | None:intergenic | 30.0% |
| ! | TGAATGTCAAATAGAGTATC+AGG | + | chr3_3:50939121-50939140 | None:intergenic | 30.0% |
| GCAATATTATCCTATGTTCA+AGG | + | chr3_3:50939295-50939314 | None:intergenic | 30.0% | |
| !! | AATGGACTAATTTGATGACA+GGG | + | chr3_3:50939402-50939421 | None:intergenic | 30.0% |
| !! | TAATGGACTAATTTGATGAC+AGG | + | chr3_3:50939403-50939422 | None:intergenic | 30.0% |
| !!! | GGCAACTCTTCATTTTTTAA+TGG | + | chr3_3:50939420-50939439 | None:intergenic | 30.0% |
| ! | GTGTCAATTTTGAACTTTTG+AGG | + | chr3_3:50939479-50939498 | None:intergenic | 30.0% |
| TCTATAGAGAAACCATTTGA+AGG | - | chr3_3:50939729-50939748 | Msa0456760:CDS | 30.0% | |
| ! | TTTCAACTTTCTGAAAGCAA+AGG | + | chr3_3:50940036-50940055 | None:intergenic | 30.0% |
| GATATGACAATTTGTGAACA+AGG | + | chr3_3:50940076-50940095 | None:intergenic | 30.0% | |
| TGTTCACAAATTGTCATATC+TGG | - | chr3_3:50940076-50940095 | Msa0456760:intron | 30.0% | |
| TGTGCCAAATTACAATGTAT+CGG | - | chr3_3:50940185-50940204 | Msa0456760:CDS | 30.0% | |
| ! | AATAACCAAACAAGCTCTAA+GGG | - | chr3_3:50940749-50940768 | Msa0456760:intron | 30.0% |
| ! | TTGTGATTTGAAGTTCAAAC+CGG | - | chr3_3:50941128-50941147 | Msa0456760:intron | 30.0% |
| AAGAGGCAAAGAAGTTTATT+AGG | - | chr3_3:50941163-50941182 | Msa0456760:intron | 30.0% | |
| CAAAGAAGTTTATTAGGAGT+GGG | - | chr3_3:50941169-50941188 | Msa0456760:intron | 30.0% | |
| AAAGAAGTTTATTAGGAGTG+GGG | - | chr3_3:50941170-50941189 | Msa0456760:intron | 30.0% | |
| AAAAAGTAGACGAAGCATAT+CGG | - | chr3_3:50941310-50941329 | Msa0456760:intron | 30.0% | |
| AACTAAAGGAGAAAATGTGA+GGG | + | chr3_3:50941347-50941366 | None:intergenic | 30.0% | |
| AAACTAAAGGAGAAAATGTG+AGG | + | chr3_3:50941348-50941367 | None:intergenic | 30.0% | |
| AAATCAACTTCAACACTCTA+CGG | + | chr3_3:50941420-50941439 | None:intergenic | 30.0% | |
| !! | TAGTTTGGAAATGATTTGCT+TGG | + | chr3_3:50941605-50941624 | None:intergenic | 30.0% |
| ! | TTTTGCTTCAGAAAAGTGAT+AGG | + | chr3_3:50941715-50941734 | None:intergenic | 30.0% |
| !!! | GTTTTTTGGTATGTTTTGCA+TGG | - | chr3_3:50941789-50941808 | Msa0456760:intron | 30.0% |
| TATACTTCTCATGAATGCAA+GGG | + | chr3_3:50941963-50941982 | None:intergenic | 30.0% | |
| ATATACTTCTCATGAATGCA+AGG | + | chr3_3:50941964-50941983 | None:intergenic | 30.0% | |
| GTCCATTACAAATACCAATT+TGG | + | chr3_3:50942159-50942178 | None:intergenic | 30.0% | |
| GCATACGTGAAGATATTTGA+AGG | + | chr3_3:50934856-50934875 | None:intergenic | 35.0% | |
| GGAAAAAGAGAATCTGAGTT+TGG | + | chr3_3:50934881-50934900 | None:intergenic | 35.0% | |
| !! | GGTTCTAAAGTAGAGACTAA+TGG | - | chr3_3:50935329-50935348 | Msa0456760:intron | 35.0% |
| ! | TCTAAAGTAGAGACTAATGG+TGG | - | chr3_3:50935332-50935351 | Msa0456760:intron | 35.0% |
| ATGTTAGAAGCAATCTCATC+AGG | + | chr3_3:50935410-50935429 | None:intergenic | 35.0% | |
| AACTTGAAAGGTGAAAAGTG+AGG | + | chr3_3:50935455-50935474 | None:intergenic | 35.0% | |
| TGTTCAAGCTCAAACTTGAA+AGG | + | chr3_3:50935467-50935486 | None:intergenic | 35.0% | |
| CGTATTCATATAAGCTATCC+TGG | - | chr3_3:50935811-50935830 | Msa0456760:CDS | 35.0% | |
| CAGTAACCAAGTCAAATTGT+TGG | + | chr3_3:50935996-50936015 | None:intergenic | 35.0% | |
| CAACTTCAGTCACATTAACT+TGG | - | chr3_3:50936097-50936116 | Msa0456760:intron | 35.0% | |
| !!! | CAAGTTGCGATTCGTTTTTT+AGG | - | chr3_3:50936127-50936146 | Msa0456760:intron | 35.0% |
| TAGGACTTAAATCAAATGCG+AGG | + | chr3_3:50936261-50936280 | None:intergenic | 35.0% | |
| ! | TCGCATTTGATTTAAGTCCT+AGG | - | chr3_3:50936260-50936279 | Msa0456760:intron | 35.0% |
| !! | CTTGTATTGGTTGTTTGGAT+AGG | - | chr3_3:50936291-50936310 | Msa0456760:intron | 35.0% |
| TTATCAATGGAGTTCCTTCA+AGG | - | chr3_3:50936410-50936429 | Msa0456760:intron | 35.0% | |
| !! | ATTTCCAATAGCATTGGTCA+AGG | + | chr3_3:50936441-50936460 | None:intergenic | 35.0% |
| ! | GCAACTTTTTATTACCTGCT+CGG | + | chr3_3:50936528-50936547 | None:intergenic | 35.0% |
| CAATCTCTCTTCTTTAGTAC+TGG | - | chr3_3:50936558-50936577 | Msa0456760:intron | 35.0% | |
| !! | GTAATCGTGTTTTTATACGC+TGG | + | chr3_3:50936688-50936707 | None:intergenic | 35.0% |
| ACATGAATCTTTGCAGGAAA+AGG | - | chr3_3:50936719-50936738 | Msa0456760:CDS | 35.0% | |
| ! | AGGTAAATTAAGTGTTGCCA+TGG | + | chr3_3:50936799-50936818 | None:intergenic | 35.0% |
| CAACACTTAATTTACCTGCT+TGG | - | chr3_3:50936802-50936821 | Msa0456760:CDS | 35.0% | |
| ACACTTAATTTACCTGCTTG+GGG | - | chr3_3:50936804-50936823 | Msa0456760:intron | 35.0% | |
| TCTGTTTAAATAGTCCGTAC+CGG | + | chr3_3:50936845-50936864 | None:intergenic | 35.0% | |
| TTGTACCCTATCAGATTCTT+TGG | - | chr3_3:50937041-50937060 | Msa0456760:CDS | 35.0% | |
| ! | TTTTACACTGCTTTGGTACA+TGG | - | chr3_3:50937127-50937146 | Msa0456760:CDS | 35.0% |
| CATGATCTTTGACAATGAAC+TGG | + | chr3_3:50937441-50937460 | None:intergenic | 35.0% | |
| AGAGGTGATAATCATGATTG+AGG | + | chr3_3:50937558-50937577 | None:intergenic | 35.0% | |
| !! | ATTTGTTCGGTTTTGTATCC+TGG | - | chr3_3:50937645-50937664 | Msa0456760:intron | 35.0% |
| !! | TTTGTTCGGTTTTGTATCCT+GGG | - | chr3_3:50937646-50937665 | Msa0456760:intron | 35.0% |
| AATTACAGGACATCATTTCC+CGG | - | chr3_3:50937825-50937844 | Msa0456760:CDS | 35.0% | |
| !! | CATCAACTCTGGTATTGATA+GGG | + | chr3_3:50937933-50937952 | None:intergenic | 35.0% |
| ATAAGTAAACGCATCAACTC+TGG | + | chr3_3:50937944-50937963 | None:intergenic | 35.0% | |
| !! | AGAGTTGATGCGTTTACTTA+TGG | - | chr3_3:50937943-50937962 | Msa0456760:CDS | 35.0% |
| CGTTTACTTATGGATGAAGA+AGG | - | chr3_3:50937953-50937972 | Msa0456760:CDS | 35.0% | |
| ATTAGTGTAAGCAATTGTCC+TGG | + | chr3_3:50938148-50938167 | None:intergenic | 35.0% | |
| TATCATTGTAGTGAACTGCA+TGG | + | chr3_3:50938353-50938372 | None:intergenic | 35.0% | |
| AATGATAAGTAAAACCCGAC+TGG | - | chr3_3:50938366-50938385 | Msa0456760:intron | 35.0% | |
| AAGACATCAATAGGGTAAGA+TGG | + | chr3_3:50938518-50938537 | None:intergenic | 35.0% | |
| GAGGATAGAAGACATCAATA+GGG | + | chr3_3:50938526-50938545 | None:intergenic | 35.0% | |
| AGAGGATAGAAGACATCAAT+AGG | + | chr3_3:50938527-50938546 | None:intergenic | 35.0% | |
| !!! | GACACCATCTAGTTTTTTCA+TGG | - | chr3_3:50938591-50938610 | Msa0456760:CDS | 35.0% |
| CTCCATTCACCTATAATAGA+TGG | + | chr3_3:50938698-50938717 | None:intergenic | 35.0% | |
| CAAAAATTGATCCATCTTCG+AGG | + | chr3_3:50938819-50938838 | None:intergenic | 35.0% | |
| ACATTCTAACATTTGATCCC+TGG | - | chr3_3:50938974-50938993 | Msa0456760:intron | 35.0% | |
| GGATATTGAGAGAGATAATG+TGG | + | chr3_3:50939381-50939400 | None:intergenic | 35.0% | |
| !! | GAACTTTTGAGGGACTAATT+TGG | + | chr3_3:50939468-50939487 | None:intergenic | 35.0% |
| AGTAATGATACCGACACAAA+GGG | + | chr3_3:50939511-50939530 | None:intergenic | 35.0% | |
| AAGTAATGATACCGACACAA+AGG | + | chr3_3:50939512-50939531 | None:intergenic | 35.0% | |
| ! | AAATCTTTGAGAGGCTAACT+TGG | - | chr3_3:50939667-50939686 | Msa0456760:CDS | 35.0% |
| ! | TTGTACTTTTCCGTTCTTCA+GGG | + | chr3_3:50939846-50939865 | None:intergenic | 35.0% |
| CGACTTACACAAATGCTAAA+CGG | - | chr3_3:50939902-50939921 | Msa0456760:intron | 35.0% | |
| TATTGTAAACAGTGATCCTG+TGG | - | chr3_3:50939954-50939973 | Msa0456760:CDS | 35.0% | |
| TCACAAATTGTCATATCTGG+TGG | - | chr3_3:50940079-50940098 | Msa0456760:intron | 35.0% | |
| !! | AGCTTGTTCAAACCTTTTTC+AGG | - | chr3_3:50940155-50940174 | Msa0456760:CDS | 35.0% |
| ! | AAATTACAATGTATCGGTGG+CGG | - | chr3_3:50940191-50940210 | Msa0456760:CDS | 35.0% |
| ! | TTGAATGGGTGCCTTATTAT+AGG | - | chr3_3:50940300-50940319 | Msa0456760:intron | 35.0% |
| TACTTTAGATGGAGCTAATG+TGG | - | chr3_3:50940323-50940342 | Msa0456760:intron | 35.0% | |
| !!! | GAGGAGAATTTTTTCCTCTT+TGG | - | chr3_3:50940366-50940385 | Msa0456760:intron | 35.0% |
| CAATAACCAAACAAGCTCTA+AGG | - | chr3_3:50940748-50940767 | Msa0456760:intron | 35.0% | |
| GTGATAGAGAGAAGATGTAA+GGG | + | chr3_3:50940965-50940984 | None:intergenic | 35.0% | |
| TGTGATAGAGAGAAGATGTA+AGG | + | chr3_3:50940966-50940985 | None:intergenic | 35.0% | |
| GCAAAGAAGTTTATTAGGAG+TGG | - | chr3_3:50941168-50941187 | Msa0456760:intron | 35.0% | |
| CTTCCAATGAATCAAGCAAT+GGG | + | chr3_3:50941218-50941237 | None:intergenic | 35.0% | |
| GATTCATTGGAAGGAAATTC+TGG | - | chr3_3:50941225-50941244 | Msa0456760:intron | 35.0% | |
| ! | TTGGAAGGAAATTCTGGTTA+TGG | - | chr3_3:50941231-50941250 | Msa0456760:intron | 35.0% |
| TTCTCCCTAGCTGTTTATTA+TGG | - | chr3_3:50941367-50941386 | Msa0456760:intron | 35.0% | |
| ACTTCTAGTCAAATCCAGAT+TGG | + | chr3_3:50941516-50941535 | None:intergenic | 35.0% | |
| ! | AGTGATAGGTGATGTTACTT+TGG | + | chr3_3:50941701-50941720 | None:intergenic | 35.0% |
| ! | ATGTCTATCTTAAGTACTGC+TGG | - | chr3_3:50941839-50941858 | Msa0456760:intron | 35.0% |
| ! | TGTCTATCTTAAGTACTGCT+GGG | - | chr3_3:50941840-50941859 | Msa0456760:intron | 35.0% |
| CTCAGTATGCTAAGGAAATT+TGG | - | chr3_3:50941894-50941913 | Msa0456760:intron | 35.0% | |
| GATGTATCCAGCTGAAATTA+TGG | + | chr3_3:50941941-50941960 | None:intergenic | 35.0% | |
| ! | ATTTGCTTAGCCTTCCAAAT+TGG | - | chr3_3:50942142-50942161 | Msa0456760:five_prime_UTR | 35.0% |
| !!! | ACTGCTACTTTTCTCTCACT+TGG | - | chr3_3:50934956-50934975 | Msa0456760:three_prime_UTR | 40.0% |
| !!! | CTGCTACTTTTCTCTCACTT+GGG | - | chr3_3:50934957-50934976 | Msa0456760:three_prime_UTR | 40.0% |
| !! | TCATCAGGTTTTTCAGCTAG+TGG | + | chr3_3:50935395-50935414 | None:intergenic | 40.0% |
| !! | TAGAAGTGCACTTTTGCTGT+AGG | - | chr3_3:50935627-50935646 | Msa0456760:intron | 40.0% |
| !!! | CATTGGTGATGTTTTTGACC+TGG | - | chr3_3:50935697-50935716 | Msa0456760:CDS | 40.0% |
| CTTATTTCCATAAGCTCTCC+AGG | + | chr3_3:50935832-50935851 | None:intergenic | 40.0% | |
| AACTTGATCCTACAGCTTTC+TGG | + | chr3_3:50935922-50935941 | None:intergenic | 40.0% | |
| TTTGTACGACAGAAAGCTGT+AGG | - | chr3_3:50935960-50935979 | Msa0456760:intron | 40.0% | |
| ACTTGAAGAAATAACCGAGC+AGG | - | chr3_3:50936511-50936530 | Msa0456760:intron | 40.0% | |
| GAAGCTTTCATTATGAGCGA+TGG | + | chr3_3:50936620-50936639 | None:intergenic | 40.0% | |
| TTCTTGCTTTCTGGATTCCA+TGG | - | chr3_3:50936779-50936798 | Msa0456760:CDS | 40.0% | |
| CACTTAATTTACCTGCTTGG+GGG | - | chr3_3:50936805-50936824 | Msa0456760:intron | 40.0% | |
| GATAATCGCAAAAGAAGGTC+AGG | - | chr3_3:50936863-50936882 | Msa0456760:intron | 40.0% | |
| CAAACAGAAGTTTAGCCCTT+GGG | - | chr3_3:50936998-50937017 | Msa0456760:intron | 40.0% | |
| !! | TTGGTTTGGTATCCAGGAAT+TGG | + | chr3_3:50937262-50937281 | None:intergenic | 40.0% |
| TGATTCTTCTTTACAGGGAG+AGG | + | chr3_3:50937576-50937595 | None:intergenic | 40.0% | |
| !! | TTGTTCGGTTTTGTATCCTG+GGG | - | chr3_3:50937647-50937666 | Msa0456760:intron | 40.0% |
| ! | TAGAAGTTTTCCACCTTCTG+TGG | + | chr3_3:50937676-50937695 | None:intergenic | 40.0% |
| CAGAAGGTGGAAAACTTCTA+CGG | - | chr3_3:50937676-50937695 | Msa0456760:intron | 40.0% | |
| AAATTCTGGATTCAATGGCG+TGG | - | chr3_3:50937745-50937764 | Msa0456760:intron | 40.0% | |
| TCTCACCTTCAACCAATTAC+AGG | - | chr3_3:50937811-50937830 | Msa0456760:CDS | 40.0% | |
| GATGTCCTGTAATTGGTTGA+AGG | + | chr3_3:50937819-50937838 | None:intergenic | 40.0% | |
| GGGAAATGATGTCCTGTAAT+TGG | + | chr3_3:50937826-50937845 | None:intergenic | 40.0% | |
| AATTGTACAGCAACCTTCGT+CGG | + | chr3_3:50937893-50937912 | None:intergenic | 40.0% | |
| !! | AACTCTGGTATTGATAGGGT+CGG | + | chr3_3:50937929-50937948 | None:intergenic | 40.0% |
| !! | GCATCAACTCTGGTATTGAT+AGG | + | chr3_3:50937934-50937953 | None:intergenic | 40.0% |
| AATGGTCTCAGTCTGTAATG+TGG | - | chr3_3:50938196-50938215 | Msa0456760:CDS | 40.0% | |
| TCTATGATTTCCATGTGACG+AGG | + | chr3_3:50938231-50938250 | None:intergenic | 40.0% | |
| ! | ACTTTCCAACATGCGCATTT+TGG | - | chr3_3:50938402-50938421 | Msa0456760:intron | 40.0% |
| ATTGTCCAAAATGCGCATGT+TGG | + | chr3_3:50938410-50938429 | None:intergenic | 40.0% | |
| AAATTTGCCATCCGAACAAC+TGG | + | chr3_3:50938445-50938464 | None:intergenic | 40.0% | |
| CATGTTGGGCCATCTATTAT+AGG | - | chr3_3:50938686-50938705 | Msa0456760:intron | 40.0% | |
| GGCCATCTATTATAGGTGAA+TGG | - | chr3_3:50938693-50938712 | Msa0456760:intron | 40.0% | |
| ! | GTGATTATTTGGCTTAGCTC+AGG | + | chr3_3:50938846-50938865 | None:intergenic | 40.0% |
| ACCTGTCAGTAAGTCAAGAT+CGG | + | chr3_3:50938898-50938917 | None:intergenic | 40.0% | |
| TTCATTGTCAGCAAACTGCA+GGG | + | chr3_3:50939008-50939027 | None:intergenic | 40.0% | |
| ACTGTACTCTATCATGCAGT+GGG | + | chr3_3:50939233-50939252 | None:intergenic | 40.0% | |
| AACTGTACTCTATCATGCAG+TGG | + | chr3_3:50939234-50939253 | None:intergenic | 40.0% | |
| ! | ATAGCTCTGTCCTTGAACAT+AGG | - | chr3_3:50939282-50939301 | Msa0456760:CDS | 40.0% |
| GGCAACACTCAAATCTTTGA+AGG | + | chr3_3:50939360-50939379 | None:intergenic | 40.0% | |
| CCAAATTCATCCCTTTGTGT+CGG | - | chr3_3:50939498-50939517 | Msa0456760:intron | 40.0% | |
| GGGACACTTAAATCTTTGAG+AGG | - | chr3_3:50939658-50939677 | Msa0456760:CDS | 40.0% | |
| ! | GTTGTACTTTTCCGTTCTTC+AGG | + | chr3_3:50939847-50939866 | None:intergenic | 40.0% |
| TTCAAGTAGCTATTGACCAC+AGG | + | chr3_3:50939973-50939992 | None:intergenic | 40.0% | |
| TGTGGTCAATAGCTACTTGA+AGG | - | chr3_3:50939972-50939991 | Msa0456760:CDS | 40.0% | |
| CAAATTGTCATATCTGGTGG+TGG | - | chr3_3:50940082-50940101 | Msa0456760:intron | 40.0% | |
| GCACAAACACAACCTGAAAA+AGG | + | chr3_3:50940170-50940189 | None:intergenic | 40.0% | |
| GCCAAATTACAATGTATCGG+TGG | - | chr3_3:50940188-50940207 | Msa0456760:CDS | 40.0% | |
| GCCACCGATACATTGTAATT+TGG | + | chr3_3:50940192-50940211 | None:intergenic | 40.0% | |
| ATGGAGCTAATGTGGAAATC+AGG | - | chr3_3:50940331-50940350 | Msa0456760:intron | 40.0% | |
| TGGAGCTAATGTGGAAATCA+GGG | - | chr3_3:50940332-50940351 | Msa0456760:intron | 40.0% | |
| ATCCTGAAGTTCAAGGAACT+AGG | + | chr3_3:50940573-50940592 | None:intergenic | 40.0% | |
| CAAACAGATCCTGAAGTTCA+AGG | + | chr3_3:50940580-50940599 | None:intergenic | 40.0% | |
| CTTGAACTTCAGGATCTGTT+TGG | - | chr3_3:50940578-50940597 | Msa0456760:CDS | 40.0% | |
| AGAAGATGTAAGGGAAGCTA+GGG | + | chr3_3:50940956-50940975 | None:intergenic | 40.0% | |
| TTCTTTGCCTCTTCAAATCG+AGG | + | chr3_3:50941156-50941175 | None:intergenic | 40.0% | |
| ! | TTTATTAGGAGTGGGGTGTT+TGG | - | chr3_3:50941177-50941196 | Msa0456760:intron | 40.0% |
| CAACCCATTGCTTGATTCAT+TGG | - | chr3_3:50941212-50941231 | Msa0456760:intron | 40.0% | |
| CCTTCCAATGAATCAAGCAA+TGG | + | chr3_3:50941219-50941238 | None:intergenic | 40.0% | |
| CCATTGCTTGATTCATTGGA+AGG | - | chr3_3:50941216-50941235 | Msa0456760:intron | 40.0% | |
| CGTGGTGATTACTTTCTTGT+TGG | - | chr3_3:50941255-50941274 | Msa0456760:intron | 40.0% | |
| ACAGCTAGGGAGAAAACTAA+AGG | + | chr3_3:50941361-50941380 | None:intergenic | 40.0% | |
| GACAATTGCTCAGTATGCTA+AGG | - | chr3_3:50941886-50941905 | Msa0456760:intron | 40.0% | |
| CCAGCTGAAATTATGGTACA+CGG | + | chr3_3:50941934-50941953 | None:intergenic | 40.0% | |
| CAAGTCTCATTCTGTTTCAG+TGG | - | chr3_3:50942178-50942197 | Msa0456760:five_prime_UTR | 40.0% | |
| ATGTGTCTCACTCTCACTTG+AGG | - | chr3_3:50934771-50934790 | Msa0456760:three_prime_UTR | 45.0% | |
| TTCTGCTAAAGTTCCAGCTG+TGG | - | chr3_3:50935364-50935383 | Msa0456760:intron | 45.0% | |
| AGTGAGGACTATACTGAGCA+TGG | + | chr3_3:50935439-50935458 | None:intergenic | 45.0% | |
| AAGCTATCCTGGAGAGCTTA+TGG | - | chr3_3:50935822-50935841 | Msa0456760:CDS | 45.0% | |
| AGACAGTTTGGGAGAGCTTA+TGG | + | chr3_3:50935889-50935908 | None:intergenic | 45.0% | |
| GCGTACTTGTGAGACAGTTT+GGG | + | chr3_3:50935900-50935919 | None:intergenic | 45.0% | |
| AAGGATGCAGCACTAGGAAA+TGG | - | chr3_3:50936738-50936757 | Msa0456760:CDS | 45.0% | |
| ! | TAGGAAATGGTGGTCTTGGT+CGG | - | chr3_3:50936751-50936770 | Msa0456760:CDS | 45.0% |
| AATTTACCTGCTTGGGGGTA+TGG | - | chr3_3:50936810-50936829 | Msa0456760:intron | 45.0% | |
| !! | TATGGTTTGAGGTACCGGTA+CGG | - | chr3_3:50936828-50936847 | Msa0456760:intron | 45.0% |
| AATCGCAAAAGAAGGTCAGG+AGG | - | chr3_3:50936866-50936885 | Msa0456760:intron | 45.0% | |
| CCAAGGGCTAAACTTCTGTT+TGG | + | chr3_3:50937000-50937019 | None:intergenic | 45.0% | |
| CCAAACAGAAGTTTAGCCCT+TGG | - | chr3_3:50936997-50937016 | Msa0456760:intron | 45.0% | |
| TTAGCCCTTGGGAAATTGTG+AGG | - | chr3_3:50937009-50937028 | Msa0456760:CDS | 45.0% | |
| CCTGGCCAAAGAATCTGATA+GGG | + | chr3_3:50937049-50937068 | None:intergenic | 45.0% | |
| ACCTGGCCAAAGAATCTGAT+AGG | + | chr3_3:50937050-50937069 | None:intergenic | 45.0% | |
| TCGAGGTTAACCCTAATGGA+AGG | - | chr3_3:50937069-50937088 | Msa0456760:CDS | 45.0% | |
| TATGCCAGCCGAAAATGGAT+TGG | - | chr3_3:50937202-50937221 | Msa0456760:intron | 45.0% | |
| ! | CTTCTCCGCCAATCCATTTT+CGG | + | chr3_3:50937213-50937232 | None:intergenic | 45.0% |
| GCTTATGATGTGCCAATTCC+TGG | - | chr3_3:50937247-50937266 | Msa0456760:intron | 45.0% | |
| !! | GTGTTCTTGGTTTGGTATCC+AGG | + | chr3_3:50937268-50937287 | None:intergenic | 45.0% |
| ! | GACTGATGGTGTTCTTGGTT+TGG | + | chr3_3:50937276-50937295 | None:intergenic | 45.0% |
| !! | ACTCTGGTATTGATAGGGTC+GGG | + | chr3_3:50937928-50937947 | None:intergenic | 45.0% |
| CTTATGGATGAAGAAGGGCT+TGG | - | chr3_3:50937959-50937978 | Msa0456760:CDS | 45.0% | |
| AGACCATTTCTCCAGTGCTT+CGG | + | chr3_3:50938184-50938203 | None:intergenic | 45.0% | |
| GAAATTGCTTCCTCGTCACA+TGG | - | chr3_3:50938218-50938237 | Msa0456760:CDS | 45.0% | |
| TTCACTCTCAAGATCCAGTC+GGG | + | chr3_3:50938383-50938402 | None:intergenic | 45.0% | |
| GTTCACTCTCAAGATCCAGT+CGG | + | chr3_3:50938384-50938403 | None:intergenic | 45.0% | |
| TCGGATGGCAAATTTGTGTG+TGG | - | chr3_3:50938450-50938469 | Msa0456760:intron | 45.0% | |
| ATGGCATTACACCTCGAAGA+TGG | - | chr3_3:50938805-50938824 | Msa0456760:CDS | 45.0% | |
| ACCGATCTTGACTTACTGAC+AGG | - | chr3_3:50938894-50938913 | Msa0456760:intron | 45.0% | |
| !! | GTTGCATGTAGAGAAGCATC+CGG | + | chr3_3:50938937-50938956 | None:intergenic | 45.0% |
| ACTGCAGGGAAAAAACACCA+GGG | + | chr3_3:50938994-50939013 | None:intergenic | 45.0% | |
| AACTGCAGGGAAAAAACACC+AGG | + | chr3_3:50938995-50939014 | None:intergenic | 45.0% | |
| CTTCATTGTCAGCAAACTGC+AGG | + | chr3_3:50939009-50939028 | None:intergenic | 45.0% | |
| ATGAAGATCTGCAAGCAGAG+TGG | - | chr3_3:50939023-50939042 | Msa0456760:CDS | 45.0% | |
| !! | AGTACGTTCTGAAGGTGACA+GGG | - | chr3_3:50939083-50939102 | Msa0456760:CDS | 45.0% |
| CCGACACAAAGGGATGAATT+TGG | + | chr3_3:50939501-50939520 | None:intergenic | 45.0% | |
| CACTGTCATGATTGGAGGAA+AGG | - | chr3_3:50939873-50939892 | Msa0456760:intron | 45.0% | |
| TGCTAAACGGATAGTCAAGC+TGG | - | chr3_3:50939915-50939934 | Msa0456760:CDS | 45.0% | |
| GTCAAGCTGGTCAATGATGT+TGG | - | chr3_3:50939928-50939947 | Msa0456760:CDS | 45.0% | |
| TCCCAACATATTAGTACCGC+AGG | - | chr3_3:50940240-50940259 | Msa0456760:CDS | 45.0% | |
| GCCTGCGGTACTAATATGTT+GGG | + | chr3_3:50940244-50940263 | None:intergenic | 45.0% | |
| TGCCTGCGGTACTAATATGT+TGG | + | chr3_3:50940245-50940264 | None:intergenic | 45.0% | |
| ACATATTAGTACCGCAGGCA+TGG | - | chr3_3:50940245-50940264 | Msa0456760:CDS | 45.0% | |
| GTGGAAATCAGGGAAGAGAT+CGG | - | chr3_3:50940342-50940361 | Msa0456760:intron | 45.0% | |
| CACCTAGTTCCTTGAACTTC+AGG | - | chr3_3:50940568-50940587 | Msa0456760:CDS | 45.0% | |
| ! | ACTGACCCTTAGAGCTTGTT+TGG | + | chr3_3:50940757-50940776 | None:intergenic | 45.0% |
| GAGAAGATGTAAGGGAAGCT+AGG | + | chr3_3:50940957-50940976 | None:intergenic | 45.0% | |
| ! | GGAAATTCTGGTTATGGTCG+TGG | - | chr3_3:50941237-50941256 | Msa0456760:intron | 45.0% |
| TTATGACTTCCCAAGCTACG+TGG | - | chr3_3:50941278-50941297 | Msa0456760:intron | 45.0% | |
| CATGGTGCAGTGACAAGAAA+AGG | - | chr3_3:50941807-50941826 | Msa0456760:intron | 45.0% | |
| ! | ATCTTAAGTACTGCTGGGAG+TGG | - | chr3_3:50941845-50941864 | Msa0456760:intron | 45.0% |
| ! | TCTTAAGTACTGCTGGGAGT+GGG | - | chr3_3:50941846-50941865 | Msa0456760:intron | 45.0% |
| CCGTGTACCATAATTTCAGC+TGG | - | chr3_3:50941931-50941950 | Msa0456760:intron | 45.0% | |
| AGCAGATGCATTGAGAGAGA+GGG | + | chr3_3:50942061-50942080 | None:intergenic | 45.0% | |
| AAGCAGATGCATTGAGAGAG+AGG | + | chr3_3:50942062-50942081 | None:intergenic | 45.0% | |
| !!! | TTTTTAATTAAAAAGTATTA+TGG | + | chr3_3:50940711-50940730 | None:intergenic | 5.0% |
| CTCACTCTCACTTGAGGTTG+AGG | - | chr3_3:50934777-50934796 | Msa0456760:three_prime_UTR | 50.0% | |
| TGTTCGTGATCGTCTCGTTC+AGG | - | chr3_3:50935511-50935530 | Msa0456760:intron | 50.0% | |
| GGCGTACTTGTGAGACAGTT+TGG | + | chr3_3:50935901-50935920 | None:intergenic | 50.0% | |
| CAAGTACGCCAGAAAGCTGT+AGG | - | chr3_3:50935911-50935930 | Msa0456760:intron | 50.0% | |
| CGAGCCTTGACCAATGCTAT+TGG | - | chr3_3:50936434-50936453 | Msa0456760:intron | 50.0% | |
| GCTGATGCTTTGCGCAAGTT+CGG | - | chr3_3:50936482-50936501 | Msa0456760:intron | 50.0% | |
| CAGGAAAAGGATGCAGCACT+AGG | - | chr3_3:50936732-50936751 | Msa0456760:CDS | 50.0% | |
| GATGCAGCACTAGGAAATGG+TGG | - | chr3_3:50936741-50936760 | Msa0456760:CDS | 50.0% | |
| GCACTAGGAAATGGTGGTCT+TGG | - | chr3_3:50936747-50936766 | Msa0456760:CDS | 50.0% | |
| ! | TCGGCTTGCTTCTTGCTTTC+TGG | - | chr3_3:50936770-50936789 | Msa0456760:CDS | 50.0% |
| CGTGCCTCACAATTTCCCAA+GGG | + | chr3_3:50937016-50937035 | None:intergenic | 50.0% | |
| TCGTGCCTCACAATTTCCCA+AGG | + | chr3_3:50937017-50937036 | None:intergenic | 50.0% | |
| CCCTATCAGATTCTTTGGCC+AGG | - | chr3_3:50937046-50937065 | Msa0456760:CDS | 50.0% | |
| CATTAGGGTTAACCTCGACC+TGG | + | chr3_3:50937067-50937086 | None:intergenic | 50.0% | |
| CAGGTCGAGGTTAACCCTAA+TGG | - | chr3_3:50937065-50937084 | Msa0456760:CDS | 50.0% | |
| GTGTGTATGCCAGCCGAAAA+TGG | - | chr3_3:50937197-50937216 | Msa0456760:intron | 50.0% | |
| ! | GCGAAGACTGATGGTGTTCT+TGG | + | chr3_3:50937281-50937300 | None:intergenic | 50.0% |
| ! | CACAAGCTTTAGCTTCCCAG+AGG | + | chr3_3:50937303-50937322 | None:intergenic | 50.0% |
| GGACATCATTTCCCGGTTCA+AGG | - | chr3_3:50937832-50937851 | Msa0456760:CDS | 50.0% | |
| TCATTTCCCGGTTCAAGGAG+AGG | - | chr3_3:50937837-50937856 | Msa0456760:CDS | 50.0% | |
| AGCAACCTTCGTCGGAAACT+CGG | + | chr3_3:50937885-50937904 | None:intergenic | 50.0% | |
| !! | TGGTATTGATAGGGTCGGGT+GGG | + | chr3_3:50937924-50937943 | None:intergenic | 50.0% |
| TGGATGAAGAAGGGCTTGGA+TGG | - | chr3_3:50937963-50937982 | Msa0456760:CDS | 50.0% | |
| GGATGAAGAAGGGCTTGGAT+GGG | - | chr3_3:50937964-50937983 | Msa0456760:CDS | 50.0% | |
| GCTTGGATGGGATGAAGCAT+GGG | - | chr3_3:50937976-50937995 | Msa0456760:intron | 50.0% | |
| !! | GCAGAACTTGTTGCGTTGTG+TGG | - | chr3_3:50938023-50938042 | Msa0456760:intron | 50.0% |
| ACCATTTCTCCAGTGCTTCG+GGG | + | chr3_3:50938182-50938201 | None:intergenic | 50.0% | |
| GACCATTTCTCCAGTGCTTC+GGG | + | chr3_3:50938183-50938202 | None:intergenic | 50.0% | |
| ATCCCCAGAAGCCAGTTGTT+CGG | - | chr3_3:50938431-50938450 | Msa0456760:intron | 50.0% | |
| ! | ATCCGAACAACTGGCTTCTG+GGG | + | chr3_3:50938436-50938455 | None:intergenic | 50.0% |
| ! | CATCCGAACAACTGGCTTCT+GGG | + | chr3_3:50938437-50938456 | None:intergenic | 50.0% |
| CTTACTGACAGGTCTTCGAG+AGG | - | chr3_3:50938905-50938924 | Msa0456760:intron | 50.0% | |
| AGAGTGGTCGTCTGCAAAGA+TGG | - | chr3_3:50939039-50939058 | Msa0456760:CDS | 50.0% | |
| GATGGCTAATAAGCAGCGCT+TGG | - | chr3_3:50939057-50939076 | Msa0456760:CDS | 50.0% | |
| CTTGGCACAGTACGTTCTGA+AGG | - | chr3_3:50939075-50939094 | Msa0456760:CDS | 50.0% | |
| !! | CAGTACGTTCTGAAGGTGAC+AGG | - | chr3_3:50939082-50939101 | Msa0456760:CDS | 50.0% |
| !! | GTACGTTCTGAAGGTGACAG+GGG | - | chr3_3:50939084-50939103 | Msa0456760:CDS | 50.0% |
| AGCGTATCCACGAGTACAAG+AGG | - | chr3_3:50939146-50939165 | Msa0456760:CDS | 50.0% | |
| AGGAGATGAGCCCTGAAGAA+CGG | - | chr3_3:50939833-50939852 | Msa0456760:intron | 50.0% | |
| ACTGCACGCACTGTCATGAT+TGG | - | chr3_3:50939865-50939884 | Msa0456760:intron | 50.0% | |
| ! | TTACAATGTATCGGTGGCGG+AGG | - | chr3_3:50940194-50940213 | Msa0456760:CDS | 50.0% |
| GTTGGGATAGCTCACTTCCT+GGG | + | chr3_3:50940227-50940246 | None:intergenic | 50.0% | |
| TGTTGGGATAGCTCACTTCC+TGG | + | chr3_3:50940228-50940247 | None:intergenic | 50.0% | |
| AATCAGGGAAGAGATCGGTG+AGG | - | chr3_3:50940347-50940366 | Msa0456760:intron | 50.0% | |
| ! | TTTCCTCTTTGGTGCGACAG+CGG | - | chr3_3:50940377-50940396 | Msa0456760:intron | 50.0% |
| TGATGTACCTCGACTGAGGA+AGG | - | chr3_3:50940401-50940420 | Msa0456760:intron | 50.0% | |
| TCTCTTTCCTTCCTCAGTCG+AGG | + | chr3_3:50940411-50940430 | None:intergenic | 50.0% | |
| TCGACTGAGGAAGGAAAGAG+AGG | - | chr3_3:50940410-50940429 | Msa0456760:intron | 50.0% | |
| CTGAGGAAGGAAAGAGAGGA+TGG | - | chr3_3:50940414-50940433 | Msa0456760:intron | 50.0% | |
| GAAGGAAAGAGAGGATGGAC+TGG | - | chr3_3:50940419-50940438 | Msa0456760:intron | 50.0% | |
| ! | ACCGGATCCTCGATTTGAAG+AGG | - | chr3_3:50941146-50941165 | Msa0456760:intron | 50.0% |
| GCCTCTTCAAATCGAGGATC+CGG | + | chr3_3:50941150-50941169 | None:intergenic | 50.0% | |
| GGTGCAGTGACAAGAAAAGG+TGG | - | chr3_3:50941810-50941829 | Msa0456760:intron | 50.0% | |
| !! | GCTAGTGGATTTGCCACAGC+TGG | + | chr3_3:50935380-50935399 | None:intergenic | 55.0% |
| TGGTCAAGGCTCGACCTTGA+AGG | + | chr3_3:50936427-50936446 | None:intergenic | 55.0% | |
| CTCAAACCATACCCCCAAGC+AGG | + | chr3_3:50936819-50936838 | None:intergenic | 55.0% | |
| ! | CTGCTTGGGGGTATGGTTTG+AGG | - | chr3_3:50936817-50936836 | Msa0456760:intron | 55.0% |
| ! | GGGGGTATGGTTTGAGGTAC+CGG | - | chr3_3:50936823-50936842 | Msa0456760:intron | 55.0% |
| AGGTCAGGAGGAAGTTGCTG+AGG | - | chr3_3:50936878-50936897 | Msa0456760:intron | 55.0% | |
| AGGAGGAAGTTGCTGAGGAC+TGG | - | chr3_3:50936883-50936902 | Msa0456760:intron | 55.0% | |
| CAGATTCTTTGGCCAGGTCG+AGG | - | chr3_3:50937052-50937071 | Msa0456760:CDS | 55.0% | |
| !! | GCCAGCCGAAAATGGATTGG+CGG | - | chr3_3:50937205-50937224 | Msa0456760:intron | 55.0% |
| ! | TCCGCCAATCCATTTTCGGC+TGG | + | chr3_3:50937209-50937228 | None:intergenic | 55.0% |
| ACACCATCAGTCTTCGCCTC+TGG | - | chr3_3:50937284-50937303 | Msa0456760:intron | 55.0% | |
| CACCATCAGTCTTCGCCTCT+GGG | - | chr3_3:50937285-50937304 | Msa0456760:intron | 55.0% | |
| TTCCCAGAGGCGAAGACTGA+TGG | + | chr3_3:50937290-50937309 | None:intergenic | 55.0% | |
| GCTTCACTCACGAGCTCAAC+AGG | - | chr3_3:50937378-50937397 | Msa0456760:intron | 55.0% | |
| TATCCTGGGGATGCCACAGA+AGG | - | chr3_3:50937660-50937679 | Msa0456760:intron | 55.0% | |
| TTTCCCGGTTCAAGGAGAGG+AGG | - | chr3_3:50937840-50937859 | Msa0456760:CDS | 55.0% | |
| GGAAACTCGGACCAGTTCCA+AGG | + | chr3_3:50937872-50937891 | None:intergenic | 55.0% | |
| !! | CTGGTATTGATAGGGTCGGG+TGG | + | chr3_3:50937925-50937944 | None:intergenic | 55.0% |
| GGCTTGGATGGGATGAAGCA+TGG | - | chr3_3:50937975-50937994 | Msa0456760:intron | 55.0% | |
| TGGATGGGATGAAGCATGGG+AGG | - | chr3_3:50937979-50937998 | Msa0456760:intron | 55.0% | |
| ATTTCTCCAGTGCTTCGGGG+AGG | + | chr3_3:50938179-50938198 | None:intergenic | 55.0% | |
| !! | TCCCCGAAGCACTGGAGAAA+TGG | - | chr3_3:50938178-50938197 | Msa0456760:CDS | 55.0% |
| ! | CCATCCGAACAACTGGCTTC+TGG | + | chr3_3:50938438-50938457 | None:intergenic | 55.0% |
| CCAGAAGCCAGTTGTTCGGA+TGG | - | chr3_3:50938435-50938454 | Msa0456760:intron | 55.0% | |
| GGTCTTCGAGAGGTGAGTAC+CGG | - | chr3_3:50938915-50938934 | Msa0456760:intron | 55.0% | |
| GTAGCTGCCTCTTGTACTCG+TGG | + | chr3_3:50939156-50939175 | None:intergenic | 55.0% | |
| GCACGCACTGTCATGATTGG+AGG | - | chr3_3:50939868-50939887 | Msa0456760:intron | 55.0% | |
| CGGATGATGTACCTCGACTG+AGG | - | chr3_3:50940397-50940416 | Msa0456760:intron | 55.0% | |
| CCTGAGCATCCACGTAGCTT+GGG | + | chr3_3:50941290-50941309 | None:intergenic | 55.0% | |
| TCCTGAGCATCCACGTAGCT+TGG | + | chr3_3:50941291-50941310 | None:intergenic | 55.0% | |
| GTGGGAAGTTCAGCAGTGAC+AGG | - | chr3_3:50941864-50941883 | Msa0456760:intron | 55.0% | |
| !! | AGTTGCTGAGGACTGGCTCG+AGG | - | chr3_3:50936890-50936909 | Msa0456760:intron | 60.0% |
| CTGCCTCCTCTCCTTGAACC+GGG | + | chr3_3:50937846-50937865 | None:intergenic | 60.0% | |
| CCTGCCTCCTCTCCTTGAAC+CGG | + | chr3_3:50937847-50937866 | None:intergenic | 60.0% | |
| CGGTTCAAGGAGAGGAGGCA+GGG | - | chr3_3:50937845-50937864 | Msa0456760:CDS | 60.0% | |
| CTGGTCCGAGTTTCCGACGA+AGG | - | chr3_3:50937877-50937896 | Msa0456760:CDS | 60.0% | |
| ACCGCAGGCATGGAAGCAAG+TGG | - | chr3_3:50940255-50940274 | Msa0456760:intron | 60.0% | |
| GCCACTTGCTTCCATGCCTG+CGG | + | chr3_3:50940259-50940278 | None:intergenic | 60.0% | |
| CATCCGCTGTCGCACCAAAG+AGG | + | chr3_3:50940383-50940402 | None:intergenic | 60.0% | |
| CCCAAGCTACGTGGATGCTC+AGG | - | chr3_3:50941287-50941306 | Msa0456760:intron | 60.0% | |
| CCACCTTCTGTGGCATCCCC+AGG | + | chr3_3:50937666-50937685 | None:intergenic | 65.0% | |
| CCTGGGGATGCCACAGAAGG+TGG | - | chr3_3:50937663-50937682 | Msa0456760:intron | 65.0% | |
| CCGGTTCAAGGAGAGGAGGC+AGG | - | chr3_3:50937844-50937863 | Msa0456760:CDS | 65.0% | |
| AGGAGAGGAGGCAGGGACCT+TGG | - | chr3_3:50937852-50937871 | Msa0456760:CDS | 65.0% | |
| GGAGGCAGGGACCTTGGAAC+TGG | - | chr3_3:50937858-50937877 | Msa0456760:CDS | 65.0% | |
| CACTGTCCTCCCCGAAGCAC+TGG | - | chr3_3:50938170-50938189 | Msa0456760:CDS | 65.0% | |
| !! | GTGGCGGAGGTGCTTATCCC+AGG | - | chr3_3:50940207-50940226 | Msa0456760:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 50934768 | 50942231 | 50934768 | ID=Msa0456760;Name=Msa0456760 |
| chr3_3 | mRNA | 50934768 | 50942231 | 50934768 | ID=Msa0456760-mRNA-1;Parent=Msa0456760;Name=Msa0456760-mRNA-1;_AED=0.13;_eAED=0.13;_QI=124|1|1|1|0.93|0.87|16|288|840 |
| chr3_3 | exon | 50934768 | 50935182 | 50934768 | ID=Msa0456760-mRNA-1:exon:9752;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50935668 | 50935858 | 50935668 | ID=Msa0456760-mRNA-1:exon:9751;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50936559 | 50936822 | 50936559 | ID=Msa0456760-mRNA-1:exon:9750;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50937006 | 50937164 | 50937006 | ID=Msa0456760-mRNA-1:exon:9749;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50937783 | 50937986 | 50937783 | ID=Msa0456760-mRNA-1:exon:9748;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50938073 | 50938291 | 50938073 | ID=Msa0456760-mRNA-1:exon:9747;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50938513 | 50938641 | 50938513 | ID=Msa0456760-mRNA-1:exon:9746;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50938733 | 50938850 | 50938733 | ID=Msa0456760-mRNA-1:exon:9745;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50938988 | 50939166 | 50938988 | ID=Msa0456760-mRNA-1:exon:9744;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50939262 | 50939354 | 50939262 | ID=Msa0456760-mRNA-1:exon:9743;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50939600 | 50939789 | 50939600 | ID=Msa0456760-mRNA-1:exon:9742;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50939909 | 50939994 | 50939909 | ID=Msa0456760-mRNA-1:exon:9741;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50940088 | 50940264 | 50940088 | ID=Msa0456760-mRNA-1:exon:9740;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50940467 | 50940646 | 50940467 | ID=Msa0456760-mRNA-1:exon:9739;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50941467 | 50941695 | 50941467 | ID=Msa0456760-mRNA-1:exon:9738;Parent=Msa0456760-mRNA-1 |
| chr3_3 | exon | 50942130 | 50942231 | 50942130 | ID=Msa0456760-mRNA-1:exon:9737;Parent=Msa0456760-mRNA-1 |
| chr3_3 | five_prime_UTR | 50942130 | 50942231 | 50942130 | ID=Msa0456760-mRNA-1:five_prime_utr;Parent=Msa0456760-mRNA-1 |
| chr3_3 | five_prime_UTR | 50941674 | 50941695 | 50941674 | ID=Msa0456760-mRNA-1:five_prime_utr;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50941467 | 50941673 | 50941467 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50940467 | 50940646 | 50940467 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50940088 | 50940264 | 50940088 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50939909 | 50939994 | 50939909 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50939600 | 50939789 | 50939600 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50939262 | 50939354 | 50939262 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50938988 | 50939166 | 50938988 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50938733 | 50938850 | 50938733 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50938513 | 50938641 | 50938513 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50938073 | 50938291 | 50938073 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50937783 | 50937986 | 50937783 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50937006 | 50937164 | 50937006 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50936559 | 50936822 | 50936559 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50935668 | 50935858 | 50935668 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | CDS | 50935056 | 50935182 | 50935056 | ID=Msa0456760-mRNA-1:cds;Parent=Msa0456760-mRNA-1 |
| chr3_3 | three_prime_UTR | 50934768 | 50935055 | 50934768 | ID=Msa0456760-mRNA-1:three_prime_utr;Parent=Msa0456760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
