Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570680 | XP_003607905.1 | 82.222 | 315 | 8 | 2 | 1 | 267 | 307 | 621 | 4.45e-179 | 517 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570680 | sp|Q88BD4|ALGC_PSESM | 35.088 | 171 | 104 | 5 | 2 | 171 | 212 | 376 | 1.74e-20 | 93.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570680 | G7JJZ2 | 82.222 | 315 | 8 | 2 | 1 | 267 | 307 | 621 | 2.13e-179 | 517 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0570680 | 0.862218 | 5.920962e-64 | -8.615850e-47 |
| Msa0005690 | Msa0570680 | 0.820440 | 6.850382e-53 | -8.615850e-47 |
| Msa0012380 | Msa0570680 | 0.814866 | 1.238682e-51 | -8.615850e-47 |
| Msa0014410 | Msa0570680 | 0.841255 | 5.309960e-58 | -8.615850e-47 |
| Msa0044180 | Msa0570680 | 0.856235 | 3.690044e-62 | -8.615850e-47 |
| Msa0053960 | Msa0570680 | 0.802946 | 4.408004e-49 | -8.615850e-47 |
| Msa0064550 | Msa0570680 | 0.853159 | 2.872766e-61 | -8.615850e-47 |
| Msa0072830 | Msa0570680 | 0.845618 | 3.630141e-59 | -8.615850e-47 |
| Msa0072860 | Msa0570680 | 0.846895 | 1.629746e-59 | -8.615850e-47 |
| Msa0080810 | Msa0570680 | 0.833678 | 4.644487e-56 | -8.615850e-47 |
| Msa0091470 | Msa0570680 | 0.827545 | 1.474978e-54 | -8.615850e-47 |
| Msa0096510 | Msa0570680 | 0.822298 | 2.553155e-53 | -8.615850e-47 |
| Msa0097190 | Msa0570680 | -0.800098 | 1.690089e-48 | -8.615850e-47 |
| Msa0101170 | Msa0570680 | -0.801353 | 9.371453e-49 | -8.615850e-47 |
| Msa0104360 | Msa0570680 | 0.801194 | 1.010157e-48 | -8.615850e-47 |
| Msa0108070 | Msa0570680 | 0.837186 | 6.031205e-57 | -8.615850e-47 |
| Msa0109490 | Msa0570680 | 0.838070 | 3.576484e-57 | -8.615850e-47 |
| Msa0114700 | Msa0570680 | 0.814494 | 1.497171e-51 | -8.615850e-47 |
| Msa0116470 | Msa0570680 | 0.843915 | 1.044507e-58 | -8.615850e-47 |
| Msa0116510 | Msa0570680 | 0.861122 | 1.280422e-63 | -8.615850e-47 |
| Msa0131090 | Msa0570680 | 0.803159 | 3.981200e-49 | -8.615850e-47 |
| Msa0147540 | Msa0570680 | 0.814942 | 1.191645e-51 | -8.615850e-47 |
| Msa0154200 | Msa0570680 | 0.805648 | 1.206112e-49 | -8.615850e-47 |
| Msa0154220 | Msa0570680 | 0.816128 | 6.488729e-52 | -8.615850e-47 |
| Msa0154240 | Msa0570680 | 0.866999 | 1.890691e-65 | -8.615850e-47 |
| Msa0154270 | Msa0570680 | 0.861196 | 1.216210e-63 | -8.615850e-47 |
| Msa0173370 | Msa0570680 | 0.851946 | 6.371179e-61 | -8.615850e-47 |
| Msa0187980 | Msa0570680 | 0.853695 | 2.015462e-61 | -8.615850e-47 |
| Msa0197030 | Msa0570680 | 0.831540 | 1.575169e-55 | -8.615850e-47 |
| Msa0199740 | Msa0570680 | 0.804416 | 2.183075e-49 | -8.615850e-47 |
| Msa0202740 | Msa0570680 | 0.822504 | 2.286516e-53 | -8.615850e-47 |
| Msa0224400 | Msa0570680 | 0.803404 | 3.542193e-49 | -8.615850e-47 |
| Msa0225880 | Msa0570680 | 0.813948 | 1.976371e-51 | -8.615850e-47 |
| Msa0364780 | Msa0570680 | 0.804709 | 1.896475e-49 | -8.615850e-47 |
| Msa0377280 | Msa0570680 | 0.824819 | 6.565212e-54 | -8.615850e-47 |
| Msa0379340 | Msa0570680 | -0.823674 | 1.219725e-53 | -8.615850e-47 |
| Msa0384530 | Msa0570680 | 0.810182 | 1.308884e-50 | -8.615850e-47 |
| Msa0389060 | Msa0570680 | 0.814133 | 1.799636e-51 | -8.615850e-47 |
| Msa0392050 | Msa0570680 | 0.854591 | 1.111725e-61 | -8.615850e-47 |
| Msa0401340 | Msa0570680 | 0.808547 | 2.935640e-50 | -8.615850e-47 |
| Msa0404060 | Msa0570680 | 0.818338 | 2.065247e-52 | -8.615850e-47 |
| Msa0404070 | Msa0570680 | 0.807853 | 4.127155e-50 | -8.615850e-47 |
| Msa0404690 | Msa0570680 | 0.835428 | 1.687396e-56 | -8.615850e-47 |
| Msa0412190 | Msa0570680 | 0.803520 | 3.352430e-49 | -8.615850e-47 |
| Msa0425320 | Msa0570680 | 0.816389 | 5.670662e-52 | -8.615850e-47 |
| Msa0428850 | Msa0570680 | -0.829300 | 5.560912e-55 | -8.615850e-47 |
| Msa0448120 | Msa0570680 | 0.813276 | 2.777627e-51 | -8.615850e-47 |
| Msa0456760 | Msa0570680 | 0.827189 | 1.794863e-54 | -8.615850e-47 |
| Msa0462590 | Msa0570680 | 0.800993 | 1.110356e-48 | -8.615850e-47 |
| Msa0469950 | Msa0570680 | 0.854832 | 9.465883e-62 | -8.615850e-47 |
| Msa0471760 | Msa0570680 | 0.821733 | 3.450998e-53 | -8.615850e-47 |
| Msa0479030 | Msa0570680 | 0.802541 | 5.342184e-49 | -8.615850e-47 |
| Msa0238860 | Msa0570680 | 0.832940 | 7.093716e-56 | -8.615850e-47 |
| Msa0242820 | Msa0570680 | -0.809471 | 1.861662e-50 | -8.615850e-47 |
| Msa0245870 | Msa0570680 | 0.827926 | 1.194138e-54 | -8.615850e-47 |
| Msa0253160 | Msa0570680 | 0.819320 | 1.235333e-52 | -8.615850e-47 |
| Msa0258700 | Msa0570680 | -0.802594 | 5.210383e-49 | -8.615850e-47 |
| Msa0260190 | Msa0570680 | 0.801276 | 9.717172e-49 | -8.615850e-47 |
| Msa0260470 | Msa0570680 | 0.811073 | 8.399633e-51 | -8.615850e-47 |
| Msa0264940 | Msa0570680 | -0.802414 | 5.675167e-49 | -8.615850e-47 |
| Msa0276590 | Msa0570680 | 0.826097 | 3.270901e-54 | -8.615850e-47 |
| Msa0287660 | Msa0570680 | -0.814398 | 1.572680e-51 | -8.615850e-47 |
| Msa0291940 | Msa0570680 | 0.820318 | 7.307141e-53 | -8.615850e-47 |
| Msa0302990 | Msa0570680 | -0.803148 | 4.003383e-49 | -8.615850e-47 |
| Msa0304110 | Msa0570680 | 0.817544 | 3.120802e-52 | -8.615850e-47 |
| Msa0308570 | Msa0570680 | 0.804192 | 2.430246e-49 | -8.615850e-47 |
| Msa0316610 | Msa0570680 | 0.823716 | 1.192404e-53 | -8.615850e-47 |
| Msa0341190 | Msa0570680 | 0.803797 | 2.936828e-49 | -8.615850e-47 |
| Msa0344680 | Msa0570680 | 0.854839 | 9.423335e-62 | -8.615850e-47 |
| Msa0354390 | Msa0570680 | 0.803091 | 4.112798e-49 | -8.615850e-47 |
| Msa0504090 | Msa0570680 | 0.803567 | 3.277186e-49 | -8.615850e-47 |
| Msa0515460 | Msa0570680 | 0.819360 | 1.210120e-52 | -8.615850e-47 |
| Msa0518480 | Msa0570680 | 0.807529 | 4.835713e-50 | -8.615850e-47 |
| Msa0530340 | Msa0570680 | 0.862243 | 5.817028e-64 | -8.615850e-47 |
| Msa0545230 | Msa0570680 | 0.838007 | 3.712618e-57 | -8.615850e-47 |
| Msa0546080 | Msa0570680 | 0.809427 | 1.902183e-50 | -8.615850e-47 |
| Msa0549110 | Msa0570680 | 0.803199 | 3.905929e-49 | -8.615850e-47 |
| Msa0549540 | Msa0570680 | 0.846076 | 2.726212e-59 | -8.615850e-47 |
| Msa0553950 | Msa0570680 | -0.813751 | 2.184286e-51 | -8.615850e-47 |
| Msa0556070 | Msa0570680 | 0.855299 | 6.924820e-62 | -8.615850e-47 |
| Msa0561420 | Msa0570680 | 0.806289 | 8.843966e-50 | -8.615850e-47 |
| Msa0565860 | Msa0570680 | 0.805765 | 1.139761e-49 | -8.615850e-47 |
| Msa0568600 | Msa0570680 | 0.803596 | 3.233054e-49 | -8.615850e-47 |
| Msa0570680 | Msa0577050 | 0.818706 | 1.703874e-52 | -8.615850e-47 |
| Msa0570680 | Msa0584280 | 0.811883 | 5.602352e-51 | -8.615850e-47 |
| Msa0570680 | Msa0600820 | 0.812218 | 4.734692e-51 | -8.615850e-47 |
| Msa0570680 | Msa0604880 | 0.842312 | 2.793078e-58 | -8.615850e-47 |
| Msa0570680 | Msa0605250 | 0.841457 | 4.696580e-58 | -8.615850e-47 |
| Msa0570680 | Msa0608050 | -0.808566 | 2.907797e-50 | -8.615850e-47 |
| Msa0570680 | Msa0608060 | -0.812288 | 4.571831e-51 | -8.615850e-47 |
| Msa0570680 | Msa0610780 | 0.930870 | 8.709057e-94 | -8.615850e-47 |
| Msa0570680 | Msa0610810 | 0.923159 | 3.832186e-89 | -8.615850e-47 |
| Msa0570680 | Msa0622250 | 0.817041 | 4.050607e-52 | -8.615850e-47 |
| Msa0570680 | Msa0624040 | 0.834303 | 3.240190e-56 | -8.615850e-47 |
| Msa0570680 | Msa0627050 | 0.872356 | 3.387646e-67 | -8.615850e-47 |
| Msa0570680 | Msa0627580 | -0.810039 | 1.405306e-50 | -8.615850e-47 |
| Msa0570680 | Msa0645410 | 0.826279 | 2.960661e-54 | -8.615850e-47 |
| Msa0570680 | Msa0646190 | 0.839084 | 1.957294e-57 | -8.615850e-47 |
| Msa0570680 | Msa0646340 | 0.858629 | 7.223696e-63 | -8.615850e-47 |
| Msa0570680 | Msa0648430 | -0.825039 | 5.825551e-54 | -8.615850e-47 |
| Msa0570680 | Msa0648440 | -0.802407 | 5.692258e-49 | -8.615850e-47 |
| Msa0570680 | Msa0651310 | 0.952177 | 4.248435e-110 | -8.615850e-47 |
| Msa0570680 | Msa0654880 | 0.810782 | 9.710949e-51 | -8.615850e-47 |
| Msa0570680 | Msa0662120 | 0.842874 | 1.981227e-58 | -8.615850e-47 |
| Msa0570680 | Msa0675010 | 0.870762 | 1.142453e-66 | -8.615850e-47 |
| Msa0570680 | Msa0676100 | 0.815839 | 7.527327e-52 | -8.615850e-47 |
| Msa0570680 | Msa0679780 | 0.816691 | 4.854048e-52 | -8.615850e-47 |
| Msa0570680 | Msa0681210 | 0.818382 | 2.018020e-52 | -8.615850e-47 |
| Msa0570680 | Msa0685000 | 0.820903 | 5.363131e-53 | -8.615850e-47 |
| Msa0570680 | Msa0685890 | 0.832097 | 1.148116e-55 | -8.615850e-47 |
| Msa0570680 | Msa0693400 | 0.857329 | 1.757601e-62 | -8.615850e-47 |
| Msa0570680 | Msa0693500 | 0.928951 | 1.393914e-92 | -8.615850e-47 |
| Msa0570680 | Msa0698650 | 0.813240 | 2.829132e-51 | -8.615850e-47 |
| Msa0570680 | Msa0702200 | 0.803251 | 3.810910e-49 | -8.615850e-47 |
| Msa0570680 | Msa0705810 | 0.821624 | 3.657169e-53 | -8.615850e-47 |
| Msa0570680 | Msa0748330 | 0.804502 | 2.095055e-49 | -8.615850e-47 |
| Msa0570680 | Msa0748980 | 0.811690 | 6.170872e-51 | -8.615850e-47 |
| Msa0570680 | Msa0749150 | 0.857493 | 1.571738e-62 | -8.615850e-47 |
| Msa0570680 | Msa0775580 | 0.814288 | 1.663150e-51 | -8.615850e-47 |
| Msa0570680 | Msa0788360 | 0.806094 | 9.719042e-50 | -8.615850e-47 |
| Msa0570680 | Msa0790640 | 0.856429 | 3.237125e-62 | -8.615850e-47 |
| Msa0570680 | Msa0792880 | 0.846655 | 1.894578e-59 | -8.615850e-47 |
| Msa0570680 | Msa0803530 | 0.826778 | 2.251229e-54 | -8.615850e-47 |
| Msa0570680 | Msa0812970 | 0.819432 | 1.164965e-52 | -8.615850e-47 |
| Msa0570680 | Msa0825520 | 0.814719 | 1.335112e-51 | -8.615850e-47 |
| Msa0570680 | Msa0826650 | 0.802847 | 4.620348e-49 | -8.615850e-47 |
| Msa0570680 | Msa0828570 | 0.811419 | 7.068264e-51 | -8.615850e-47 |
| Msa0570680 | Msa0828900 | 0.849687 | 2.755069e-60 | -8.615850e-47 |
| Msa0570680 | Msa0853500 | 0.803866 | 2.841932e-49 | -8.615850e-47 |
| Msa0570680 | Msa0864730 | 0.818774 | 1.644646e-52 | -8.615850e-47 |
| Msa0570680 | Msa0864750 | 0.819237 | 1.290326e-52 | -8.615850e-47 |
| Msa0570680 | Msa0879650 | 0.851306 | 9.672962e-61 | -8.615850e-47 |
| Msa0570680 | Msa0887100 | 0.870260 | 1.668500e-66 | -8.615850e-47 |
| Msa0570680 | Msa0892020 | 0.800174 | 1.630834e-48 | -8.615850e-47 |
| Msa0570680 | Msa0904630 | 0.810085 | 1.373806e-50 | -8.615850e-47 |
| Msa0570680 | Msa0909720 | 0.839520 | 1.508822e-57 | -8.615850e-47 |
| Msa0570680 | Msa0913140 | 0.812103 | 5.017400e-51 | -8.615850e-47 |
| Msa0570680 | Msa0928940 | 0.805645 | 1.207989e-49 | -8.615850e-47 |
| Msa0570680 | Msa0928970 | 0.810542 | 1.094681e-50 | -8.615850e-47 |
| Msa0570680 | Msa0930210 | -0.801967 | 7.013461e-49 | -8.615850e-47 |
| Msa0570680 | Msa0936650 | 0.807803 | 4.227515e-50 | -8.615850e-47 |
| Msa0570680 | Msa0936690 | 0.815915 | 7.239496e-52 | -8.615850e-47 |
| Msa0570680 | Msa0944690 | 0.804452 | 2.145371e-49 | -8.615850e-47 |
| Msa0570680 | Msa0950470 | 0.850372 | 1.772251e-60 | -8.615850e-47 |
| Msa0570680 | Msa0950570 | 0.859676 | 3.506912e-63 | -8.615850e-47 |
| Msa0570680 | Msa0956910 | 0.802647 | 5.079160e-49 | -8.615850e-47 |
| Msa0570680 | Msa0956980 | 0.810951 | 8.928598e-51 | -8.615850e-47 |
| Msa0570680 | Msa0968780 | 0.802911 | 4.480358e-49 | -8.615850e-47 |
| Msa0570680 | Msa0984000 | 0.866423 | 2.882747e-65 | -8.615850e-47 |
| Msa0570680 | Msa0999590 | 0.811101 | 8.286147e-51 | -8.615850e-47 |
| Msa0570680 | Msa1004260 | 0.800694 | 1.278067e-48 | -8.615850e-47 |
| Msa0570680 | Msa1031150 | 0.806013 | 1.010991e-49 | -8.615850e-47 |
| Msa0570680 | Msa1040730 | -0.800058 | 1.721981e-48 | -8.615850e-47 |
| Msa0570680 | Msa1071640 | 0.829487 | 5.008735e-55 | -8.615850e-47 |
| Msa0570680 | Msa1082150 | 0.822696 | 2.063302e-53 | -8.615850e-47 |
| Msa0570680 | Msa1083130 | -0.805537 | 1.272623e-49 | -8.615850e-47 |
| Msa0570680 | Msa1108540 | -0.815157 | 1.067481e-51 | -8.615850e-47 |
| Msa0570680 | Msa1117510 | 0.802879 | 4.549793e-49 | -8.615850e-47 |
| Msa0570680 | Msa1119570 | 0.815662 | 8.243487e-52 | -8.615850e-47 |
| Msa0570680 | Msa1124880 | -0.808645 | 2.797542e-50 | -8.615850e-47 |
| Msa0570680 | Msa1127910 | -0.837571 | 4.805495e-57 | -8.615850e-47 |
| Msa0570680 | Msa1128650 | -0.804537 | 2.059646e-49 | -8.615850e-47 |
| Msa0570680 | Msa1137940 | 0.807562 | 4.756426e-50 | -8.615850e-47 |
| Msa0570680 | Msa1138450 | 0.801518 | 8.671647e-49 | -8.615850e-47 |
| Msa0570680 | Msa1144730 | 0.854560 | 1.134497e-61 | -8.615850e-47 |
| Msa0570680 | Msa1152290 | -0.816733 | 4.748185e-52 | -8.615850e-47 |
| Msa0570680 | Msa1158090 | 0.829204 | 5.865548e-55 | -8.615850e-47 |
| Msa0570680 | Msa1161210 | 0.821358 | 4.212041e-53 | -8.615850e-47 |
| Msa0570680 | Msa1173380 | 0.869791 | 2.375440e-66 | -8.615850e-47 |
| Msa0570680 | Msa1177620 | 0.814243 | 1.701193e-51 | -8.615850e-47 |
| Msa0570680 | Msa1178120 | 0.822271 | 2.589395e-53 | -8.615850e-47 |
| Msa0570680 | Msa1180050 | 0.833336 | 5.653046e-56 | -8.615850e-47 |
| Msa0570680 | Msa1181520 | 0.808576 | 2.894193e-50 | -8.615850e-47 |
| Msa0570680 | Msa1182800 | 0.849959 | 2.312572e-60 | -8.615850e-47 |
| Msa0570680 | Msa1182830 | 0.854163 | 1.477830e-61 | -8.615850e-47 |
| Msa0570680 | Msa1184010 | 0.809932 | 1.481682e-50 | -8.615850e-47 |
| Msa0570680 | Msa1193400 | 0.801646 | 8.163783e-49 | -8.615850e-47 |
| Msa0570680 | Msa1206830 | 0.802135 | 6.477388e-49 | -8.615850e-47 |
| Msa0570680 | Msa1209160 | 0.840982 | 6.262073e-58 | -8.615850e-47 |
| Msa0570680 | Msa1219060 | 0.807550 | 4.785048e-50 | -8.615850e-47 |
| Msa0570680 | Msa1232270 | 0.820116 | 8.131617e-53 | -8.615850e-47 |
| Msa0570680 | Msa1236860 | 0.837491 | 5.037536e-57 | -8.615850e-47 |
| Msa0570680 | Msa1237260 | 0.800873 | 1.174689e-48 | -8.615850e-47 |
| Msa0570680 | Msa1249410 | 0.808822 | 2.563814e-50 | -8.615850e-47 |
| Msa0570680 | Msa1252300 | 0.803716 | 3.052060e-49 | -8.615850e-47 |
| Msa0570680 | Msa1255020 | 0.847837 | 8.979948e-60 | -8.615850e-47 |
| Msa0570680 | Msa1257100 | 0.832612 | 8.559409e-56 | -8.615850e-47 |
| Msa0570680 | Msa1270770 | 0.827769 | 1.302887e-54 | -8.615850e-47 |
| Msa0570680 | Msa1272950 | 0.845706 | 3.434612e-59 | -8.615850e-47 |
| Msa0570680 | Msa1295470 | 0.842451 | 2.565439e-58 | -8.615850e-47 |
| Msa0570680 | Msa1303760 | 0.836022 | 1.193608e-56 | -8.615850e-47 |
| Msa0570680 | Msa1303820 | 0.830507 | 2.825378e-55 | -8.615850e-47 |
| Msa0570680 | Msa1317240 | 0.825590 | 4.313507e-54 | -8.615850e-47 |
| Msa0570680 | Msa1349810 | 0.868571 | 5.913754e-66 | -8.615850e-47 |
| Msa0570680 | Msa1358340 | 0.810367 | 1.194301e-50 | -8.615850e-47 |
| Msa0570680 | Msa1359890 | 0.831923 | 1.267444e-55 | -8.615850e-47 |
| Msa0570680 | Msa1363070 | 0.823532 | 1.316987e-53 | -8.615850e-47 |
| Msa0570680 | Msa1369180 | 0.810956 | 8.904312e-51 | -8.615850e-47 |
| Msa0570680 | Msa1384620 | 0.817555 | 3.103399e-52 | -8.615850e-47 |
| Msa0570680 | Msa1394900 | 0.800320 | 1.523253e-48 | -8.615850e-47 |
| Msa0570680 | Msa1404690 | 0.823755 | 1.167907e-53 | -8.615850e-47 |
| Msa0570680 | Msa1406990 | 0.832666 | 8.297728e-56 | -8.615850e-47 |
| Msa0570680 | Msa1407210 | -0.800345 | 1.505701e-48 | -8.615850e-47 |
| Msa0570680 | Msa1431240 | 0.822113 | 2.818624e-53 | -8.615850e-47 |
| Msa0570680 | Msa1434660 | 0.805378 | 1.374234e-49 | -8.615850e-47 |
| Msa0570680 | Msa1439070 | 0.806326 | 8.687078e-50 | -8.615850e-47 |
| Msa0570680 | Msa1443550 | 0.809690 | 1.670531e-50 | -8.615850e-47 |
| Msa0570680 | Msa1450780 | 0.839701 | 1.353547e-57 | -8.615850e-47 |
| Msa0570680 | Msa1459540 | 0.817952 | 2.524929e-52 | -8.615850e-47 |
| Msa0570680 | Msa1460310 | -0.802827 | 4.663669e-49 | -8.615850e-47 |
| Msa0570680 | Msa1460530 | 0.809115 | 2.219705e-50 | -8.615850e-47 |
| Msa0570680 | Msa1463560 | -0.817308 | 3.527877e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570680 | MtrunA17_Chr4g0043871 | 82.222 | 315 | 8 | 2 | 1 | 267 | 307 | 621 | 0.0 | 517 |
| Msa0570680 | MtrunA17_Chr1g0199691 | 43.197 | 294 | 126 | 7 | 1 | 261 | 328 | 613 | 6.96e-66 | 216 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0570680 | AT1G70820.1 | 67.742 | 310 | 51 | 2 | 1 | 261 | 302 | 611 | 1.74e-148 | 429 |
| Msa0570680 | AT1G70820.2 | 68.858 | 289 | 41 | 2 | 1 | 240 | 302 | 590 | 1.05e-139 | 405 |
| Msa0570680 | AT5G17530.5 | 44.944 | 267 | 110 | 6 | 1 | 234 | 254 | 516 | 6.03e-65 | 212 |
| Msa0570680 | AT5G17530.1 | 45.977 | 261 | 104 | 6 | 1 | 228 | 293 | 549 | 1.23e-64 | 212 |
| Msa0570680 | AT5G17530.7 | 45.977 | 261 | 104 | 6 | 1 | 228 | 293 | 549 | 1.23e-64 | 212 |
| Msa0570680 | AT5G17530.2 | 45.977 | 261 | 104 | 6 | 1 | 228 | 293 | 549 | 1.23e-64 | 212 |
| Msa0570680 | AT5G17530.6 | 45.977 | 261 | 104 | 6 | 1 | 228 | 293 | 549 | 1.23e-64 | 212 |
| Msa0570680 | AT5G17530.3 | 45.977 | 261 | 104 | 6 | 1 | 228 | 326 | 582 | 2.19e-64 | 212 |
| Msa0570680 | AT5G17530.4 | 46.693 | 257 | 100 | 6 | 1 | 224 | 326 | 578 | 1.82e-63 | 210 |
Find 84 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGATAAGTTTGTTGAAAA+TGG | 0.159254 | 4_1:+72984899 | Msa0570680:CDS |
| GTACAGGAAGGGAGGCTTAA+AGG | 0.243975 | 4_1:+72984275 | Msa0570680:intron |
| ATGAGTTTGTCACCGTTTAT+TGG | 0.279165 | 4_1:-72983459 | None:intergenic |
| AGTAATAATCCCAAGATATA+AGG | 0.313843 | 4_1:+72985079 | Msa0570680:three_prime_UTR |
| CTTGGGATTATTACTAGTTT+AGG | 0.316416 | 4_1:-72985071 | None:intergenic |
| CTCCTTTGTCAATGACATTT+CGG | 0.316509 | 4_1:-72983614 | None:intergenic |
| AACCTTGCATATTGTAAATC+AGG | 0.317494 | 4_1:-72984930 | None:intergenic |
| TGCAAGTTCACAGCAATGTT+TGG | 0.318198 | 4_1:-72984678 | None:intergenic |
| TATTCAAATTCCTTATATCT+TGG | 0.323647 | 4_1:-72985089 | None:intergenic |
| TTAGAAAATTCAGCTGATCT+TGG | 0.348367 | 4_1:+72983381 | Msa0570680:CDS |
| ATTCAAATTCCTTATATCTT+GGG | 0.377218 | 4_1:-72985088 | None:intergenic |
| GTGAATGCTGGAAACGGTTC+AGG | 0.385357 | 4_1:+72983216 | Msa0570680:five_prime_UTR |
| GCAAGTTCACAGCAATGTTT+GGG | 0.402997 | 4_1:-72984677 | None:intergenic |
| GAAAACCATTTCCTTGATGA+TGG | 0.403160 | 4_1:+72983705 | Msa0570680:CDS |
| AGGCCTTAACATTTAGCTAT+AGG | 0.405868 | 4_1:-72985051 | None:intergenic |
| TGTACGAGCATCGGTTACTA+TGG | 0.406310 | 4_1:-72983526 | None:intergenic |
| TAGACTCATGTGGTGATTGT+TGG | 0.408525 | 4_1:+72984306 | Msa0570680:CDS |
| TACAGGAAGGGAGGCTTAAA+GGG | 0.417177 | 4_1:+72984276 | Msa0570680:intron |
| CATGGCTGCCATTGTATTGA+AGG | 0.421469 | 4_1:+72983488 | Msa0570680:CDS |
| TCGGGATTGGGAATGTGATT+AGG | 0.440559 | 4_1:-72983321 | None:intergenic |
| AAGCTTGGTGCAGATACCTT+TGG | 0.445592 | 4_1:+72983267 | Msa0570680:five_prime_UTR |
| ACTAACCATCATCAAGGAAA+TGG | 0.455559 | 4_1:-72983710 | None:intergenic |
| CTAAGTTCTACTGATTCATA+AGG | 0.458468 | 4_1:-72983946 | None:intergenic |
| TCGGTTACTATGGTTGATCC+TGG | 0.462108 | 4_1:-72983516 | None:intergenic |
| CTGCCTATAGCTAAATGTTA+AGG | 0.466168 | 4_1:+72985048 | Msa0570680:three_prime_UTR |
| AACAAAGGGAATCCAATAAA+CGG | 0.482733 | 4_1:+72983447 | Msa0570680:CDS |
| TGATTAGGAAACATGCCATC+AGG | 0.483044 | 4_1:-72983306 | None:intergenic |
| AGACTCATGTGGTGATTGTT+GGG | 0.486205 | 4_1:+72984307 | Msa0570680:CDS |
| CATCTTATGATTGAAACATC+TGG | 0.487363 | 4_1:+72983666 | Msa0570680:CDS |
| GGTGAAAATTATAATTGAAA+TGG | 0.492081 | 4_1:+72983861 | Msa0570680:CDS |
| ACTAAGTTTATAACTGATAG+AGG | 0.494389 | 4_1:+72983561 | Msa0570680:CDS |
| TATCAATTTGAGCAATGTCT+AGG | 0.498567 | 4_1:-72984883 | None:intergenic |
| CTTAACATTTAGCTATAGGC+AGG | 0.499510 | 4_1:-72985047 | None:intergenic |
| GTGATTGTTGGGTGAGTGAA+GGG | 0.507653 | 4_1:+72984318 | Msa0570680:CDS |
| TCAAGGAGGTTGCTTGTCAA+TGG | 0.508461 | 4_1:+72984710 | Msa0570680:CDS |
| TGAACATGGACAACATGGTT+GGG | 0.514106 | 4_1:+72984629 | Msa0570680:CDS |
| ATGAACATGGACAACATGGT+TGG | 0.518204 | 4_1:+72984628 | Msa0570680:CDS |
| AAGCTTGGTGGATCAGATGA+AGG | 0.519389 | 4_1:+72983892 | Msa0570680:CDS |
| CTACAGATAATAGTGAATGC+TGG | 0.522007 | 4_1:+72983204 | None:intergenic |
| TGACAAACTCATTGCTCTCA+TGG | 0.524707 | 4_1:+72983470 | Msa0570680:CDS |
| ATATAATGAAGGGGCCTACA+TGG | 0.525333 | 4_1:+72983837 | Msa0570680:intron |
| CATATTGTAAATCAGGCTGA+TGG | 0.528700 | 4_1:-72984923 | None:intergenic |
| GGTGATTGTTGGGTGAGTGA+AGG | 0.531696 | 4_1:+72984317 | Msa0570680:CDS |
| ATAATAGTGAATGCTGGAAA+CGG | 0.546802 | 4_1:+72983210 | Msa0570680:five_prime_UTR |
| TTTGAGATGCAGAGAGCCAA+AGG | 0.548288 | 4_1:-72983283 | None:intergenic |
| ATTGTATTGAAGGAAAATCC+AGG | 0.558299 | 4_1:+72983498 | Msa0570680:CDS |
| CACCATTGTTTATACCGCGT+TGG | 0.558868 | 4_1:+72983588 | Msa0570680:CDS |
| AACAATGAACATGGACAACA+TGG | 0.562336 | 4_1:+72984624 | Msa0570680:CDS |
| TAACTAACTAACCATCATCA+AGG | 0.564044 | 4_1:-72983716 | None:intergenic |
| GGTGGATCAGATGAAGGGAT+TGG | 0.566186 | 4_1:+72983898 | Msa0570680:CDS |
| TACGATGTCTTAGACAAGCT+TGG | 0.568721 | 4_1:+72983252 | Msa0570680:five_prime_UTR |
| TGTTGACATATGAGACAGGA+TGG | 0.570213 | 4_1:-72985114 | None:intergenic |
| GCGGCGTGGTTGATAACAAA+GGG | 0.576808 | 4_1:+72983433 | Msa0570680:CDS |
| CAAAGGAGTTCAGCTTAACA+AGG | 0.582640 | 4_1:+72983629 | Msa0570680:CDS |
| AACTTGCAATCATCTGCTCA+AGG | 0.583771 | 4_1:+72984693 | Msa0570680:CDS |
| AGCCTGATTTACAATATGCA+AGG | 0.589243 | 4_1:+72984928 | Msa0570680:exon |
| TCTCTGCATCTCAAACCTGA+TGG | 0.591260 | 4_1:+72983291 | Msa0570680:five_prime_UTR |
| ATATTGTAAATCAGGCTGAT+GGG | 0.593285 | 4_1:-72984922 | None:intergenic |
| ATGTTGCTGTACAGGAAGGG+AGG | 0.593434 | 4_1:+72984267 | Msa0570680:intron |
| ATGGTAAGAATGAAGCTTGG+TGG | 0.602153 | 4_1:+72983880 | Msa0570680:CDS |
| GAAATGGTAAGAATGAAGCT+TGG | 0.602393 | 4_1:+72983877 | Msa0570680:CDS |
| TCCCGAGGACAAAATTGCCA+TGG | 0.605099 | 4_1:+72983338 | Msa0570680:CDS |
| GGAAGGGAGGCTTAAAGGGT+GGG | 0.606977 | 4_1:+72984280 | Msa0570680:intron |
| GATACCGATGTTGACAGAAG+CGG | 0.611913 | 4_1:+72983414 | Msa0570680:CDS |
| GGAGTTCAGCTTAACAAGGA+GGG | 0.622995 | 4_1:+72983633 | Msa0570680:CDS |
| CGACATGCTTGTACGAGCAT+CGG | 0.627032 | 4_1:-72983535 | None:intergenic |
| AGGAAGGGAGGCTTAAAGGG+TGG | 0.627499 | 4_1:+72984279 | Msa0570680:intron |
| AGCGGCGTGGTTGATAACAA+AGG | 0.627508 | 4_1:+72983432 | Msa0570680:CDS |
| AGCTTGGTGGATCAGATGAA+GGG | 0.629122 | 4_1:+72983893 | Msa0570680:CDS |
| AATGCTGGAAACGGTTCAGG+AGG | 0.629528 | 4_1:+72983219 | Msa0570680:five_prime_UTR |
| TACCGAAATGTCATTGACAA+AGG | 0.633169 | 4_1:+72983612 | Msa0570680:CDS |
| ATGATTGAAACATCTGGTCA+CGG | 0.638606 | 4_1:+72983672 | Msa0570680:CDS |
| AACATGGTTGGGTACACATG+AGG | 0.643450 | 4_1:+72984640 | Msa0570680:CDS |
| AAAGTATCAAACAATGAACA+TGG | 0.643511 | 4_1:+72984615 | Msa0570680:CDS |
| AACCAACGCGGTATAAACAA+TGG | 0.648208 | 4_1:-72983590 | None:intergenic |
| GGGTGGGAGTTAGACTCATG+TGG | 0.663424 | 4_1:+72984296 | Msa0570680:CDS |
| AGGAGTTCAGCTTAACAAGG+AGG | 0.668823 | 4_1:+72983632 | Msa0570680:CDS |
| CGATGTTGACAGAAGCGGCG+TGG | 0.670101 | 4_1:+72983419 | Msa0570680:CDS |
| TAATGAAGGGGCCTACATGG+TGG | 0.680927 | 4_1:+72983840 | Msa0570680:intron |
| TAATCACATTCCCAATCCCG+AGG | 0.693986 | 4_1:+72983323 | Msa0570680:CDS |
| AAGTTTATAACTGATAGAGG+AGG | 0.701127 | 4_1:+72983564 | Msa0570680:CDS |
| TTGCAATCATCTGCTCAAGG+AGG | 0.704569 | 4_1:+72984696 | Msa0570680:CDS |
| TGACATTTCGGTAACCAACG+CGG | 0.705467 | 4_1:-72983602 | None:intergenic |
| CACGCCGCTTCTGTCAACAT+CGG | 0.714678 | 4_1:-72983418 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTATTTTTTACAAAAA+AGG | + | chr4_1:72984499-72984518 | Msa0570680:intron | 10.0% |
| !!! | ACATTTATTTTTTACAAAAA+AGG | + | chr4_1:72984499-72984518 | Msa0570680:intron | 10.0% |
| !! | TTTCTGTATATATATAATGA+AGG | + | chr4_1:72983826-72983845 | Msa0570680:intron | 15.0% |
| !! | TTCTGTATATATATAATGAA+GGG | + | chr4_1:72983827-72983846 | Msa0570680:intron | 15.0% |
| !! | TGAAAAAATCCTTATATTTA+AGG | - | chr4_1:72984468-72984487 | None:intergenic | 15.0% |
| !!! | TTATTTTTTACAAAAAAGGA+CGG | + | chr4_1:72984503-72984522 | Msa0570680:intron | 15.0% |
| !! | TGCAATAATAATTGAATAAA+AGG | - | chr4_1:72984832-72984851 | None:intergenic | 15.0% |
| !! | TTTCTGTATATATATAATGA+AGG | + | chr4_1:72983826-72983845 | Msa0570680:intron | 15.0% |
| !! | TTCTGTATATATATAATGAA+GGG | + | chr4_1:72983827-72983846 | Msa0570680:intron | 15.0% |
| !! | TGAAAAAATCCTTATATTTA+AGG | - | chr4_1:72984468-72984487 | None:intergenic | 15.0% |
| !!! | TTATTTTTTACAAAAAAGGA+CGG | + | chr4_1:72984503-72984522 | Msa0570680:intron | 15.0% |
| !! | TGCAATAATAATTGAATAAA+AGG | - | chr4_1:72984832-72984851 | None:intergenic | 15.0% |
| !! | TCTGTATATATATAATGAAG+GGG | + | chr4_1:72983828-72983847 | Msa0570680:intron | 20.0% |
| !! | GGTGAAAATTATAATTGAAA+TGG | + | chr4_1:72983861-72983880 | Msa0570680:CDS | 20.0% |
| !! | TACACGTATATAAAAAATTG+TGG | - | chr4_1:72984138-72984157 | None:intergenic | 20.0% |
| !! | GAAATTTCTCCTTAAATATA+AGG | + | chr4_1:72984456-72984475 | Msa0570680:intron | 20.0% |
| !!! | TTTAGAATAATAAATCTGAG+TGG | - | chr4_1:72984771-72984790 | None:intergenic | 20.0% |
| !!! | ATTGATAAGTTTGTTGAAAA+TGG | + | chr4_1:72984899-72984918 | Msa0570680:CDS | 20.0% |
| !! | ATTCAAATTCCTTATATCTT+GGG | - | chr4_1:72985091-72985110 | None:intergenic | 20.0% |
| !! | TATTCAAATTCCTTATATCT+TGG | - | chr4_1:72985092-72985111 | None:intergenic | 20.0% |
| !! | TCTGTATATATATAATGAAG+GGG | + | chr4_1:72983828-72983847 | Msa0570680:intron | 20.0% |
| !! | GGTGAAAATTATAATTGAAA+TGG | + | chr4_1:72983861-72983880 | Msa0570680:CDS | 20.0% |
| !! | TACACGTATATAAAAAATTG+TGG | - | chr4_1:72984138-72984157 | None:intergenic | 20.0% |
| !! | GAAATTTCTCCTTAAATATA+AGG | + | chr4_1:72984456-72984475 | Msa0570680:intron | 20.0% |
| !!! | TTTAGAATAATAAATCTGAG+TGG | - | chr4_1:72984771-72984790 | None:intergenic | 20.0% |
| !!! | ATTGATAAGTTTGTTGAAAA+TGG | + | chr4_1:72984899-72984918 | Msa0570680:CDS | 20.0% |
| !! | ATTCAAATTCCTTATATCTT+GGG | - | chr4_1:72985091-72985110 | None:intergenic | 20.0% |
| !! | TATTCAAATTCCTTATATCT+TGG | - | chr4_1:72985092-72985111 | None:intergenic | 20.0% |
| ! | ACTAAGTTTATAACTGATAG+AGG | + | chr4_1:72983561-72983580 | Msa0570680:CDS | 25.0% |
| ! | TTAGTTAAAACTCATGTTCA+TGG | + | chr4_1:72983740-72983759 | Msa0570680:intron | 25.0% |
| !! | ATTGATTTCATCGATATTTG+AGG | + | chr4_1:72984171-72984190 | Msa0570680:intron | 25.0% |
| ! | ACATTGTGGTTATTTAAAAG+TGG | + | chr4_1:72984235-72984254 | Msa0570680:intron | 25.0% |
| ! | CAAAATGTGCTTATAAATAG+AGG | - | chr4_1:72984431-72984450 | None:intergenic | 25.0% |
| !! | CTCTATTTATAAGCACATTT+TGG | + | chr4_1:72984429-72984448 | Msa0570680:intron | 25.0% |
| !! | CATAAAAACTGACTTTATTG+AGG | + | chr4_1:72984579-72984598 | Msa0570680:intron | 25.0% |
| !! | AAAGTATCAAACAATGAACA+TGG | + | chr4_1:72984615-72984634 | Msa0570680:CDS | 25.0% |
| ! | TATTTATTAGAGCCATGATT+TGG | + | chr4_1:72984793-72984812 | Msa0570680:intron | 25.0% |
| ! | TAAATCAGATAACCAAATCA+TGG | - | chr4_1:72984808-72984827 | None:intergenic | 25.0% |
| ! | AGTAATAATCCCAAGATATA+AGG | + | chr4_1:72985079-72985098 | Msa0570680:three_prime_UTR | 25.0% |
| ! | ACTAAGTTTATAACTGATAG+AGG | + | chr4_1:72983561-72983580 | Msa0570680:CDS | 25.0% |
| ! | TTAGTTAAAACTCATGTTCA+TGG | + | chr4_1:72983740-72983759 | Msa0570680:intron | 25.0% |
| !! | ATTGATTTCATCGATATTTG+AGG | + | chr4_1:72984171-72984190 | Msa0570680:intron | 25.0% |
| ! | ACATTGTGGTTATTTAAAAG+TGG | + | chr4_1:72984235-72984254 | Msa0570680:intron | 25.0% |
| ! | CAAAATGTGCTTATAAATAG+AGG | - | chr4_1:72984431-72984450 | None:intergenic | 25.0% |
| !! | CTCTATTTATAAGCACATTT+TGG | + | chr4_1:72984429-72984448 | Msa0570680:intron | 25.0% |
| !! | CATAAAAACTGACTTTATTG+AGG | + | chr4_1:72984579-72984598 | Msa0570680:intron | 25.0% |
| !! | AAAGTATCAAACAATGAACA+TGG | + | chr4_1:72984615-72984634 | Msa0570680:CDS | 25.0% |
| ! | TATTTATTAGAGCCATGATT+TGG | + | chr4_1:72984793-72984812 | Msa0570680:intron | 25.0% |
| ! | TAAATCAGATAACCAAATCA+TGG | - | chr4_1:72984808-72984827 | None:intergenic | 25.0% |
| ! | AGTAATAATCCCAAGATATA+AGG | + | chr4_1:72985079-72985098 | Msa0570680:three_prime_UTR | 25.0% |
| ATAATAGTGAATGCTGGAAA+CGG | + | chr4_1:72983210-72983229 | Msa0570680:five_prime_UTR | 30.0% | |
| TTAGAAAATTCAGCTGATCT+TGG | + | chr4_1:72983381-72983400 | Msa0570680:CDS | 30.0% | |
| AACAAAGGGAATCCAATAAA+CGG | + | chr4_1:72983447-72983466 | Msa0570680:CDS | 30.0% | |
| ! | TGGATTTTCCTTCAATACAA+TGG | - | chr4_1:72983499-72983518 | None:intergenic | 30.0% |
| ATTGTATTGAAGGAAAATCC+AGG | + | chr4_1:72983498-72983517 | Msa0570680:CDS | 30.0% | |
| AAGTTTATAACTGATAGAGG+AGG | + | chr4_1:72983564-72983583 | Msa0570680:CDS | 30.0% | |
| CATCTTATGATTGAAACATC+TGG | + | chr4_1:72983666-72983685 | Msa0570680:CDS | 30.0% | |
| TAACTAACTAACCATCATCA+AGG | - | chr4_1:72983719-72983738 | None:intergenic | 30.0% | |
| CATCTATAAAACATTCAACG+TGG | - | chr4_1:72983791-72983810 | None:intergenic | 30.0% | |
| ! | TATAATTTTCACCACCATGT+AGG | - | chr4_1:72983854-72983873 | None:intergenic | 30.0% |
| !! | CTAAGTTCTACTGATTCATA+AGG | - | chr4_1:72983949-72983968 | None:intergenic | 30.0% |
| CTTATGAATCAGTAGAACTT+AGG | + | chr4_1:72983947-72983966 | Msa0570680:intron | 30.0% | |
| AAATGCTAAAGCAAAAGGAT+CGG | + | chr4_1:72983993-72984012 | Msa0570680:intron | 30.0% | |
| AAAGCTAGTTGAAGTTTAGT+TGG | - | chr4_1:72984064-72984083 | None:intergenic | 30.0% | |
| ! | AACTAAACTTCAACTAGCTT+TGG | + | chr4_1:72984063-72984082 | Msa0570680:intron | 30.0% |
| CACAATGTGTCAAAATATGT+AGG | - | chr4_1:72984223-72984242 | None:intergenic | 30.0% | |
| !!! | CTACATATTTTGACACATTG+TGG | + | chr4_1:72984221-72984240 | Msa0570680:intron | 30.0% |
| ATATTGATGCTCAAATGTAC+AGG | + | chr4_1:72984372-72984391 | Msa0570680:intron | 30.0% | |
| AATGTGCTTATAAATAGAGG+CGG | - | chr4_1:72984428-72984447 | None:intergenic | 30.0% | |
| !! | TTTATAAGCACATTTTGGAG+AGG | + | chr4_1:72984434-72984453 | Msa0570680:intron | 30.0% |
| !!! | TTTTTTACAAAAAAGGACGG+AGG | + | chr4_1:72984506-72984525 | Msa0570680:intron | 30.0% |
| ! | TTTTTACAAAAAAGGACGGA+GGG | + | chr4_1:72984507-72984526 | Msa0570680:intron | 30.0% |
| ACTTTATTGAGGCAAATCAA+GGG | + | chr4_1:72984590-72984609 | Msa0570680:intron | 30.0% | |
| TATCAATTTGAGCAATGTCT+AGG | - | chr4_1:72984886-72984905 | None:intergenic | 30.0% | |
| ATATTGTAAATCAGGCTGAT+GGG | - | chr4_1:72984925-72984944 | None:intergenic | 30.0% | |
| AACCTTGCATATTGTAAATC+AGG | - | chr4_1:72984933-72984952 | None:intergenic | 30.0% | |
| ! | CTTGGGATTATTACTAGTTT+AGG | - | chr4_1:72985074-72985093 | None:intergenic | 30.0% |
| ATAATAGTGAATGCTGGAAA+CGG | + | chr4_1:72983210-72983229 | Msa0570680:five_prime_UTR | 30.0% | |
| TTAGAAAATTCAGCTGATCT+TGG | + | chr4_1:72983381-72983400 | Msa0570680:CDS | 30.0% | |
| AACAAAGGGAATCCAATAAA+CGG | + | chr4_1:72983447-72983466 | Msa0570680:CDS | 30.0% | |
| ! | TGGATTTTCCTTCAATACAA+TGG | - | chr4_1:72983499-72983518 | None:intergenic | 30.0% |
| ATTGTATTGAAGGAAAATCC+AGG | + | chr4_1:72983498-72983517 | Msa0570680:CDS | 30.0% | |
| AAGTTTATAACTGATAGAGG+AGG | + | chr4_1:72983564-72983583 | Msa0570680:CDS | 30.0% | |
| CATCTTATGATTGAAACATC+TGG | + | chr4_1:72983666-72983685 | Msa0570680:CDS | 30.0% | |
| TAACTAACTAACCATCATCA+AGG | - | chr4_1:72983719-72983738 | None:intergenic | 30.0% | |
| CATCTATAAAACATTCAACG+TGG | - | chr4_1:72983791-72983810 | None:intergenic | 30.0% | |
| ! | TATAATTTTCACCACCATGT+AGG | - | chr4_1:72983854-72983873 | None:intergenic | 30.0% |
| !! | CTAAGTTCTACTGATTCATA+AGG | - | chr4_1:72983949-72983968 | None:intergenic | 30.0% |
| CTTATGAATCAGTAGAACTT+AGG | + | chr4_1:72983947-72983966 | Msa0570680:intron | 30.0% | |
| AAATGCTAAAGCAAAAGGAT+CGG | + | chr4_1:72983993-72984012 | Msa0570680:intron | 30.0% | |
| AAAGCTAGTTGAAGTTTAGT+TGG | - | chr4_1:72984064-72984083 | None:intergenic | 30.0% | |
| ! | AACTAAACTTCAACTAGCTT+TGG | + | chr4_1:72984063-72984082 | Msa0570680:intron | 30.0% |
| CACAATGTGTCAAAATATGT+AGG | - | chr4_1:72984223-72984242 | None:intergenic | 30.0% | |
| !!! | CTACATATTTTGACACATTG+TGG | + | chr4_1:72984221-72984240 | Msa0570680:intron | 30.0% |
| ATATTGATGCTCAAATGTAC+AGG | + | chr4_1:72984372-72984391 | Msa0570680:intron | 30.0% | |
| AATGTGCTTATAAATAGAGG+CGG | - | chr4_1:72984428-72984447 | None:intergenic | 30.0% | |
| !! | TTTATAAGCACATTTTGGAG+AGG | + | chr4_1:72984434-72984453 | Msa0570680:intron | 30.0% |
| !!! | TTTTTTACAAAAAAGGACGG+AGG | + | chr4_1:72984506-72984525 | Msa0570680:intron | 30.0% |
| ! | TTTTTACAAAAAAGGACGGA+GGG | + | chr4_1:72984507-72984526 | Msa0570680:intron | 30.0% |
| ACTTTATTGAGGCAAATCAA+GGG | + | chr4_1:72984590-72984609 | Msa0570680:intron | 30.0% | |
| TATCAATTTGAGCAATGTCT+AGG | - | chr4_1:72984886-72984905 | None:intergenic | 30.0% | |
| ATATTGTAAATCAGGCTGAT+GGG | - | chr4_1:72984925-72984944 | None:intergenic | 30.0% | |
| AACCTTGCATATTGTAAATC+AGG | - | chr4_1:72984933-72984952 | None:intergenic | 30.0% | |
| ! | CTTGGGATTATTACTAGTTT+AGG | - | chr4_1:72985074-72985093 | None:intergenic | 30.0% |
| ATGAGTTTGTCACCGTTTAT+TGG | - | chr4_1:72983462-72983481 | None:intergenic | 35.0% | |
| TACCGAAATGTCATTGACAA+AGG | + | chr4_1:72983612-72983631 | Msa0570680:CDS | 35.0% | |
| CTCCTTTGTCAATGACATTT+CGG | - | chr4_1:72983617-72983636 | None:intergenic | 35.0% | |
| ATGATTGAAACATCTGGTCA+CGG | + | chr4_1:72983672-72983691 | Msa0570680:CDS | 35.0% | |
| GAAAACCATTTCCTTGATGA+TGG | + | chr4_1:72983705-72983724 | Msa0570680:CDS | 35.0% | |
| ACTAACCATCATCAAGGAAA+TGG | - | chr4_1:72983713-72983732 | None:intergenic | 35.0% | |
| GAAATGGTAAGAATGAAGCT+TGG | + | chr4_1:72983877-72983896 | Msa0570680:CDS | 35.0% | |
| AACATTTCGAAACTACATCG+AGG | + | chr4_1:72984026-72984045 | Msa0570680:intron | 35.0% | |
| !! | GTGTTTTTATGTTGCTGTAC+AGG | + | chr4_1:72984259-72984278 | Msa0570680:intron | 35.0% |
| ! | TTTTATGTTGCTGTACAGGA+AGG | + | chr4_1:72984263-72984282 | Msa0570680:intron | 35.0% |
| TTTATGTTGCTGTACAGGAA+GGG | + | chr4_1:72984264-72984283 | Msa0570680:intron | 35.0% | |
| ATTTGAGCATCAATATGAGC+CGG | - | chr4_1:72984368-72984387 | None:intergenic | 35.0% | |
| GACTTTATTGAGGCAAATCA+AGG | + | chr4_1:72984589-72984608 | Msa0570680:intron | 35.0% | |
| AACAATGAACATGGACAACA+TGG | + | chr4_1:72984624-72984643 | Msa0570680:CDS | 35.0% | |
| CATATTGTAAATCAGGCTGA+TGG | - | chr4_1:72984926-72984945 | None:intergenic | 35.0% | |
| AGCCTGATTTACAATATGCA+AGG | + | chr4_1:72984928-72984947 | Msa0570680:exon | 35.0% | |
| CTTAACATTTAGCTATAGGC+AGG | - | chr4_1:72985050-72985069 | None:intergenic | 35.0% | |
| CTGCCTATAGCTAAATGTTA+AGG | + | chr4_1:72985048-72985067 | Msa0570680:three_prime_UTR | 35.0% | |
| AGGCCTTAACATTTAGCTAT+AGG | - | chr4_1:72985054-72985073 | None:intergenic | 35.0% | |
| ! | CTTTTGTTGACATATGAGAC+AGG | - | chr4_1:72985121-72985140 | None:intergenic | 35.0% |
| ATGAGTTTGTCACCGTTTAT+TGG | - | chr4_1:72983462-72983481 | None:intergenic | 35.0% | |
| TACCGAAATGTCATTGACAA+AGG | + | chr4_1:72983612-72983631 | Msa0570680:CDS | 35.0% | |
| CTCCTTTGTCAATGACATTT+CGG | - | chr4_1:72983617-72983636 | None:intergenic | 35.0% | |
| ATGATTGAAACATCTGGTCA+CGG | + | chr4_1:72983672-72983691 | Msa0570680:CDS | 35.0% | |
| GAAAACCATTTCCTTGATGA+TGG | + | chr4_1:72983705-72983724 | Msa0570680:CDS | 35.0% | |
| ACTAACCATCATCAAGGAAA+TGG | - | chr4_1:72983713-72983732 | None:intergenic | 35.0% | |
| GAAATGGTAAGAATGAAGCT+TGG | + | chr4_1:72983877-72983896 | Msa0570680:CDS | 35.0% | |
| AACATTTCGAAACTACATCG+AGG | + | chr4_1:72984026-72984045 | Msa0570680:intron | 35.0% | |
| !! | GTGTTTTTATGTTGCTGTAC+AGG | + | chr4_1:72984259-72984278 | Msa0570680:intron | 35.0% |
| ! | TTTTATGTTGCTGTACAGGA+AGG | + | chr4_1:72984263-72984282 | Msa0570680:intron | 35.0% |
| TTTATGTTGCTGTACAGGAA+GGG | + | chr4_1:72984264-72984283 | Msa0570680:intron | 35.0% | |
| ATTTGAGCATCAATATGAGC+CGG | - | chr4_1:72984368-72984387 | None:intergenic | 35.0% | |
| GACTTTATTGAGGCAAATCA+AGG | + | chr4_1:72984589-72984608 | Msa0570680:intron | 35.0% | |
| AACAATGAACATGGACAACA+TGG | + | chr4_1:72984624-72984643 | Msa0570680:CDS | 35.0% | |
| CATATTGTAAATCAGGCTGA+TGG | - | chr4_1:72984926-72984945 | None:intergenic | 35.0% | |
| AGCCTGATTTACAATATGCA+AGG | + | chr4_1:72984928-72984947 | Msa0570680:exon | 35.0% | |
| CTTAACATTTAGCTATAGGC+AGG | - | chr4_1:72985050-72985069 | None:intergenic | 35.0% | |
| CTGCCTATAGCTAAATGTTA+AGG | + | chr4_1:72985048-72985067 | Msa0570680:three_prime_UTR | 35.0% | |
| AGGCCTTAACATTTAGCTAT+AGG | - | chr4_1:72985054-72985073 | None:intergenic | 35.0% | |
| ! | CTTTTGTTGACATATGAGAC+AGG | - | chr4_1:72985121-72985140 | None:intergenic | 35.0% |
| TACGATGTCTTAGACAAGCT+TGG | + | chr4_1:72983252-72983271 | Msa0570680:five_prime_UTR | 40.0% | |
| TGATTAGGAAACATGCCATC+AGG | - | chr4_1:72983309-72983328 | None:intergenic | 40.0% | |
| ! | TGCTTTTCTTGTCATTGCCA+TGG | - | chr4_1:72983358-72983377 | None:intergenic | 40.0% |
| TGACAAACTCATTGCTCTCA+TGG | + | chr4_1:72983470-72983489 | Msa0570680:CDS | 40.0% | |
| AACCAACGCGGTATAAACAA+TGG | - | chr4_1:72983593-72983612 | None:intergenic | 40.0% | |
| CAAAGGAGTTCAGCTTAACA+AGG | + | chr4_1:72983629-72983648 | Msa0570680:CDS | 40.0% | |
| ATATAATGAAGGGGCCTACA+TGG | + | chr4_1:72983837-72983856 | Msa0570680:intron | 40.0% | |
| ATGGTAAGAATGAAGCTTGG+TGG | + | chr4_1:72983880-72983899 | Msa0570680:CDS | 40.0% | |
| TGCTTTAGCATTTCGAGGTT+CGG | - | chr4_1:72983986-72984005 | None:intergenic | 40.0% | |
| ! | CCTTTTGCTTTAGCATTTCG+AGG | - | chr4_1:72983991-72984010 | None:intergenic | 40.0% |
| CCTCGAAATGCTAAAGCAAA+AGG | + | chr4_1:72983988-72984007 | Msa0570680:intron | 40.0% | |
| TAGACTCATGTGGTGATTGT+TGG | + | chr4_1:72984306-72984325 | Msa0570680:CDS | 40.0% | |
| AGACTCATGTGGTGATTGTT+GGG | + | chr4_1:72984307-72984326 | Msa0570680:CDS | 40.0% | |
| !! | GGGTGTCATTTGTATCAACA+AGG | - | chr4_1:72984346-72984365 | None:intergenic | 40.0% |
| TGTTGATACAAATGACACCC+CGG | + | chr4_1:72984346-72984365 | Msa0570680:intron | 40.0% | |
| TTTGAGCATCAATATGAGCC+GGG | - | chr4_1:72984367-72984386 | None:intergenic | 40.0% | |
| TGCTTATAAATAGAGGCGGA+GGG | - | chr4_1:72984424-72984443 | None:intergenic | 40.0% | |
| ATGAACATGGACAACATGGT+TGG | + | chr4_1:72984628-72984647 | Msa0570680:CDS | 40.0% | |
| TGAACATGGACAACATGGTT+GGG | + | chr4_1:72984629-72984648 | Msa0570680:CDS | 40.0% | |
| GCAAGTTCACAGCAATGTTT+GGG | - | chr4_1:72984680-72984699 | None:intergenic | 40.0% | |
| TGCAAGTTCACAGCAATGTT+TGG | - | chr4_1:72984681-72984700 | None:intergenic | 40.0% | |
| AACTTGCAATCATCTGCTCA+AGG | + | chr4_1:72984693-72984712 | Msa0570680:CDS | 40.0% | |
| ! | TGCAGTTTTCTCAAAGCAAG+TGG | + | chr4_1:72984848-72984867 | Msa0570680:intron | 40.0% |
| TGTTGACATATGAGACAGGA+TGG | - | chr4_1:72985117-72985136 | None:intergenic | 40.0% | |
| TACGATGTCTTAGACAAGCT+TGG | + | chr4_1:72983252-72983271 | Msa0570680:five_prime_UTR | 40.0% | |
| TGATTAGGAAACATGCCATC+AGG | - | chr4_1:72983309-72983328 | None:intergenic | 40.0% | |
| ! | TGCTTTTCTTGTCATTGCCA+TGG | - | chr4_1:72983358-72983377 | None:intergenic | 40.0% |
| TGACAAACTCATTGCTCTCA+TGG | + | chr4_1:72983470-72983489 | Msa0570680:CDS | 40.0% | |
| AACCAACGCGGTATAAACAA+TGG | - | chr4_1:72983593-72983612 | None:intergenic | 40.0% | |
| CAAAGGAGTTCAGCTTAACA+AGG | + | chr4_1:72983629-72983648 | Msa0570680:CDS | 40.0% | |
| ATATAATGAAGGGGCCTACA+TGG | + | chr4_1:72983837-72983856 | Msa0570680:intron | 40.0% | |
| ATGGTAAGAATGAAGCTTGG+TGG | + | chr4_1:72983880-72983899 | Msa0570680:CDS | 40.0% | |
| TGCTTTAGCATTTCGAGGTT+CGG | - | chr4_1:72983986-72984005 | None:intergenic | 40.0% | |
| ! | CCTTTTGCTTTAGCATTTCG+AGG | - | chr4_1:72983991-72984010 | None:intergenic | 40.0% |
| CCTCGAAATGCTAAAGCAAA+AGG | + | chr4_1:72983988-72984007 | Msa0570680:intron | 40.0% | |
| TAGACTCATGTGGTGATTGT+TGG | + | chr4_1:72984306-72984325 | Msa0570680:CDS | 40.0% | |
| AGACTCATGTGGTGATTGTT+GGG | + | chr4_1:72984307-72984326 | Msa0570680:CDS | 40.0% | |
| !! | GGGTGTCATTTGTATCAACA+AGG | - | chr4_1:72984346-72984365 | None:intergenic | 40.0% |
| TGTTGATACAAATGACACCC+CGG | + | chr4_1:72984346-72984365 | Msa0570680:intron | 40.0% | |
| TTTGAGCATCAATATGAGCC+GGG | - | chr4_1:72984367-72984386 | None:intergenic | 40.0% | |
| TGCTTATAAATAGAGGCGGA+GGG | - | chr4_1:72984424-72984443 | None:intergenic | 40.0% | |
| ATGAACATGGACAACATGGT+TGG | + | chr4_1:72984628-72984647 | Msa0570680:CDS | 40.0% | |
| TGAACATGGACAACATGGTT+GGG | + | chr4_1:72984629-72984648 | Msa0570680:CDS | 40.0% | |
| GCAAGTTCACAGCAATGTTT+GGG | - | chr4_1:72984680-72984699 | None:intergenic | 40.0% | |
| TGCAAGTTCACAGCAATGTT+TGG | - | chr4_1:72984681-72984700 | None:intergenic | 40.0% | |
| AACTTGCAATCATCTGCTCA+AGG | + | chr4_1:72984693-72984712 | Msa0570680:CDS | 40.0% | |
| ! | TGCAGTTTTCTCAAAGCAAG+TGG | + | chr4_1:72984848-72984867 | Msa0570680:intron | 40.0% |
| TGTTGACATATGAGACAGGA+TGG | - | chr4_1:72985117-72985136 | None:intergenic | 40.0% | |
| !! | AAGCTTGGTGCAGATACCTT+TGG | + | chr4_1:72983267-72983286 | Msa0570680:five_prime_UTR | 45.0% |
| ! | TTTGAGATGCAGAGAGCCAA+AGG | - | chr4_1:72983286-72983305 | None:intergenic | 45.0% |
| TCTCTGCATCTCAAACCTGA+TGG | + | chr4_1:72983291-72983310 | Msa0570680:five_prime_UTR | 45.0% | |
| TCGGGATTGGGAATGTGATT+AGG | - | chr4_1:72983324-72983343 | None:intergenic | 45.0% | |
| TAATCACATTCCCAATCCCG+AGG | + | chr4_1:72983323-72983342 | Msa0570680:CDS | 45.0% | |
| ! | GCAATTTTGTCCTCGGGATT+GGG | - | chr4_1:72983336-72983355 | None:intergenic | 45.0% |
| ! | TGCCATGGCAATTTTGTCCT+CGG | - | chr4_1:72983343-72983362 | None:intergenic | 45.0% |
| GATACCGATGTTGACAGAAG+CGG | + | chr4_1:72983414-72983433 | Msa0570680:CDS | 45.0% | |
| CATGGCTGCCATTGTATTGA+AGG | + | chr4_1:72983488-72983507 | Msa0570680:CDS | 45.0% | |
| TCGGTTACTATGGTTGATCC+TGG | - | chr4_1:72983519-72983538 | None:intergenic | 45.0% | |
| !! | TGTACGAGCATCGGTTACTA+TGG | - | chr4_1:72983529-72983548 | None:intergenic | 45.0% |
| CACCATTGTTTATACCGCGT+TGG | + | chr4_1:72983588-72983607 | Msa0570680:CDS | 45.0% | |
| TGACATTTCGGTAACCAACG+CGG | - | chr4_1:72983605-72983624 | None:intergenic | 45.0% | |
| AGGAGTTCAGCTTAACAAGG+AGG | + | chr4_1:72983632-72983651 | Msa0570680:CDS | 45.0% | |
| GGAGTTCAGCTTAACAAGGA+GGG | + | chr4_1:72983633-72983652 | Msa0570680:CDS | 45.0% | |
| ! | AAGCTTGGTGGATCAGATGA+AGG | + | chr4_1:72983892-72983911 | Msa0570680:CDS | 45.0% |
| ! | AGCTTGGTGGATCAGATGAA+GGG | + | chr4_1:72983893-72983912 | Msa0570680:CDS | 45.0% |
| TGCTAAAGCAAAAGGATCGG+AGG | + | chr4_1:72983996-72984015 | Msa0570680:intron | 45.0% | |
| TACAGGAAGGGAGGCTTAAA+GGG | + | chr4_1:72984276-72984295 | Msa0570680:intron | 45.0% | |
| GTGATTGTTGGGTGAGTGAA+GGG | + | chr4_1:72984318-72984337 | Msa0570680:CDS | 45.0% | |
| TTGAGCATCAATATGAGCCG+GGG | - | chr4_1:72984366-72984385 | None:intergenic | 45.0% | |
| GTGCTTATAAATAGAGGCGG+AGG | - | chr4_1:72984425-72984444 | None:intergenic | 45.0% | |
| AACATGGTTGGGTACACATG+AGG | + | chr4_1:72984640-72984659 | Msa0570680:CDS | 45.0% | |
| TTGCAATCATCTGCTCAAGG+AGG | + | chr4_1:72984696-72984715 | Msa0570680:CDS | 45.0% | |
| TCAAGGAGGTTGCTTGTCAA+TGG | + | chr4_1:72984710-72984729 | Msa0570680:CDS | 45.0% | |
| !! | AAGCTTGGTGCAGATACCTT+TGG | + | chr4_1:72983267-72983286 | Msa0570680:five_prime_UTR | 45.0% |
| ! | TTTGAGATGCAGAGAGCCAA+AGG | - | chr4_1:72983286-72983305 | None:intergenic | 45.0% |
| TCTCTGCATCTCAAACCTGA+TGG | + | chr4_1:72983291-72983310 | Msa0570680:five_prime_UTR | 45.0% | |
| TCGGGATTGGGAATGTGATT+AGG | - | chr4_1:72983324-72983343 | None:intergenic | 45.0% | |
| TAATCACATTCCCAATCCCG+AGG | + | chr4_1:72983323-72983342 | Msa0570680:CDS | 45.0% | |
| ! | GCAATTTTGTCCTCGGGATT+GGG | - | chr4_1:72983336-72983355 | None:intergenic | 45.0% |
| ! | TGCCATGGCAATTTTGTCCT+CGG | - | chr4_1:72983343-72983362 | None:intergenic | 45.0% |
| GATACCGATGTTGACAGAAG+CGG | + | chr4_1:72983414-72983433 | Msa0570680:CDS | 45.0% | |
| CATGGCTGCCATTGTATTGA+AGG | + | chr4_1:72983488-72983507 | Msa0570680:CDS | 45.0% | |
| TCGGTTACTATGGTTGATCC+TGG | - | chr4_1:72983519-72983538 | None:intergenic | 45.0% | |
| !! | TGTACGAGCATCGGTTACTA+TGG | - | chr4_1:72983529-72983548 | None:intergenic | 45.0% |
| CACCATTGTTTATACCGCGT+TGG | + | chr4_1:72983588-72983607 | Msa0570680:CDS | 45.0% | |
| TGACATTTCGGTAACCAACG+CGG | - | chr4_1:72983605-72983624 | None:intergenic | 45.0% | |
| AGGAGTTCAGCTTAACAAGG+AGG | + | chr4_1:72983632-72983651 | Msa0570680:CDS | 45.0% | |
| GGAGTTCAGCTTAACAAGGA+GGG | + | chr4_1:72983633-72983652 | Msa0570680:CDS | 45.0% | |
| ! | AAGCTTGGTGGATCAGATGA+AGG | + | chr4_1:72983892-72983911 | Msa0570680:CDS | 45.0% |
| ! | AGCTTGGTGGATCAGATGAA+GGG | + | chr4_1:72983893-72983912 | Msa0570680:CDS | 45.0% |
| TGCTAAAGCAAAAGGATCGG+AGG | + | chr4_1:72983996-72984015 | Msa0570680:intron | 45.0% | |
| TACAGGAAGGGAGGCTTAAA+GGG | + | chr4_1:72984276-72984295 | Msa0570680:intron | 45.0% | |
| GTGATTGTTGGGTGAGTGAA+GGG | + | chr4_1:72984318-72984337 | Msa0570680:CDS | 45.0% | |
| TTGAGCATCAATATGAGCCG+GGG | - | chr4_1:72984366-72984385 | None:intergenic | 45.0% | |
| GTGCTTATAAATAGAGGCGG+AGG | - | chr4_1:72984425-72984444 | None:intergenic | 45.0% | |
| AACATGGTTGGGTACACATG+AGG | + | chr4_1:72984640-72984659 | Msa0570680:CDS | 45.0% | |
| TTGCAATCATCTGCTCAAGG+AGG | + | chr4_1:72984696-72984715 | Msa0570680:CDS | 45.0% | |
| TCAAGGAGGTTGCTTGTCAA+TGG | + | chr4_1:72984710-72984729 | Msa0570680:CDS | 45.0% | |
| GTGAATGCTGGAAACGGTTC+AGG | + | chr4_1:72983216-72983235 | Msa0570680:five_prime_UTR | 50.0% | |
| AATGCTGGAAACGGTTCAGG+AGG | + | chr4_1:72983219-72983238 | Msa0570680:five_prime_UTR | 50.0% | |
| ! | GGCAATTTTGTCCTCGGGAT+TGG | - | chr4_1:72983337-72983356 | None:intergenic | 50.0% |
| TCCCGAGGACAAAATTGCCA+TGG | + | chr4_1:72983338-72983357 | Msa0570680:CDS | 50.0% | |
| ! | GCCATGGCAATTTTGTCCTC+GGG | - | chr4_1:72983342-72983361 | None:intergenic | 50.0% |
| !! | AGCGGCGTGGTTGATAACAA+AGG | + | chr4_1:72983432-72983451 | Msa0570680:CDS | 50.0% |
| !! | GCGGCGTGGTTGATAACAAA+GGG | + | chr4_1:72983433-72983452 | Msa0570680:CDS | 50.0% |
| CGACATGCTTGTACGAGCAT+CGG | - | chr4_1:72983538-72983557 | None:intergenic | 50.0% | |
| TAATGAAGGGGCCTACATGG+TGG | + | chr4_1:72983840-72983859 | Msa0570680:intron | 50.0% | |
| GGTGGATCAGATGAAGGGAT+TGG | + | chr4_1:72983898-72983917 | Msa0570680:CDS | 50.0% | |
| ATGTTGCTGTACAGGAAGGG+AGG | + | chr4_1:72984267-72984286 | Msa0570680:intron | 50.0% | |
| GTACAGGAAGGGAGGCTTAA+AGG | + | chr4_1:72984275-72984294 | Msa0570680:intron | 50.0% | |
| GGTGATTGTTGGGTGAGTGA+AGG | + | chr4_1:72984317-72984336 | Msa0570680:CDS | 50.0% | |
| GTGAATGCTGGAAACGGTTC+AGG | + | chr4_1:72983216-72983235 | Msa0570680:five_prime_UTR | 50.0% | |
| AATGCTGGAAACGGTTCAGG+AGG | + | chr4_1:72983219-72983238 | Msa0570680:five_prime_UTR | 50.0% | |
| ! | GGCAATTTTGTCCTCGGGAT+TGG | - | chr4_1:72983337-72983356 | None:intergenic | 50.0% |
| TCCCGAGGACAAAATTGCCA+TGG | + | chr4_1:72983338-72983357 | Msa0570680:CDS | 50.0% | |
| ! | GCCATGGCAATTTTGTCCTC+GGG | - | chr4_1:72983342-72983361 | None:intergenic | 50.0% |
| !! | AGCGGCGTGGTTGATAACAA+AGG | + | chr4_1:72983432-72983451 | Msa0570680:CDS | 50.0% |
| !! | GCGGCGTGGTTGATAACAAA+GGG | + | chr4_1:72983433-72983452 | Msa0570680:CDS | 50.0% |
| CGACATGCTTGTACGAGCAT+CGG | - | chr4_1:72983538-72983557 | None:intergenic | 50.0% | |
| TAATGAAGGGGCCTACATGG+TGG | + | chr4_1:72983840-72983859 | Msa0570680:intron | 50.0% | |
| GGTGGATCAGATGAAGGGAT+TGG | + | chr4_1:72983898-72983917 | Msa0570680:CDS | 50.0% | |
| ATGTTGCTGTACAGGAAGGG+AGG | + | chr4_1:72984267-72984286 | Msa0570680:intron | 50.0% | |
| GTACAGGAAGGGAGGCTTAA+AGG | + | chr4_1:72984275-72984294 | Msa0570680:intron | 50.0% | |
| GGTGATTGTTGGGTGAGTGA+AGG | + | chr4_1:72984317-72984336 | Msa0570680:CDS | 50.0% | |
| CACGCCGCTTCTGTCAACAT+CGG | - | chr4_1:72983421-72983440 | None:intergenic | 55.0% | |
| AGGAAGGGAGGCTTAAAGGG+TGG | + | chr4_1:72984279-72984298 | Msa0570680:intron | 55.0% | |
| GGAAGGGAGGCTTAAAGGGT+GGG | + | chr4_1:72984280-72984299 | Msa0570680:intron | 55.0% | |
| GGGTGGGAGTTAGACTCATG+TGG | + | chr4_1:72984296-72984315 | Msa0570680:CDS | 55.0% | |
| CACGCCGCTTCTGTCAACAT+CGG | - | chr4_1:72983421-72983440 | None:intergenic | 55.0% | |
| AGGAAGGGAGGCTTAAAGGG+TGG | + | chr4_1:72984279-72984298 | Msa0570680:intron | 55.0% | |
| GGAAGGGAGGCTTAAAGGGT+GGG | + | chr4_1:72984280-72984299 | Msa0570680:intron | 55.0% | |
| GGGTGGGAGTTAGACTCATG+TGG | + | chr4_1:72984296-72984315 | Msa0570680:CDS | 55.0% | |
| CGATGTTGACAGAAGCGGCG+TGG | + | chr4_1:72983419-72983438 | Msa0570680:CDS | 60.0% | |
| CGATGTTGACAGAAGCGGCG+TGG | + | chr4_1:72983419-72983438 | Msa0570680:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 72983208 | 72985140 | 72983208 | ID=Msa0570680;Name=Msa0570680 |
| chr4_1 | mRNA | 72983208 | 72985140 | 72983208 | ID=Msa0570680-mRNA-1;Parent=Msa0570680;Name=Msa0570680-mRNA-1;_AED=0.09;_eAED=0.09;_QI=107|0.5|0.6|1|0.75|0.8|5|206|267 |
| chr4_1 | exon | 72983208 | 72983726 | 72983208 | ID=Msa0570680-mRNA-1:exon:24994;Parent=Msa0570680-mRNA-1 |
| chr4_1 | exon | 72983848 | 72983957 | 72983848 | ID=Msa0570680-mRNA-1:exon:24995;Parent=Msa0570680-mRNA-1 |
| chr4_1 | exon | 72984281 | 72984339 | 72984281 | ID=Msa0570680-mRNA-1:exon:24996;Parent=Msa0570680-mRNA-1 |
| chr4_1 | exon | 72984611 | 72984751 | 72984611 | ID=Msa0570680-mRNA-1:exon:24997;Parent=Msa0570680-mRNA-1 |
| chr4_1 | exon | 72984853 | 72985140 | 72984853 | ID=Msa0570680-mRNA-1:exon:24998;Parent=Msa0570680-mRNA-1 |
| chr4_1 | five_prime_UTR | 72983208 | 72983314 | 72983208 | ID=Msa0570680-mRNA-1:five_prime_utr;Parent=Msa0570680-mRNA-1 |
| chr4_1 | CDS | 72983315 | 72983726 | 72983315 | ID=Msa0570680-mRNA-1:cds;Parent=Msa0570680-mRNA-1 |
| chr4_1 | CDS | 72983848 | 72983957 | 72983848 | ID=Msa0570680-mRNA-1:cds;Parent=Msa0570680-mRNA-1 |
| chr4_1 | CDS | 72984281 | 72984339 | 72984281 | ID=Msa0570680-mRNA-1:cds;Parent=Msa0570680-mRNA-1 |
| chr4_1 | CDS | 72984611 | 72984751 | 72984611 | ID=Msa0570680-mRNA-1:cds;Parent=Msa0570680-mRNA-1 |
| chr4_1 | CDS | 72984853 | 72984934 | 72984853 | ID=Msa0570680-mRNA-1:cds;Parent=Msa0570680-mRNA-1 |
| chr4_1 | three_prime_UTR | 72984935 | 72985140 | 72984935 | ID=Msa0570680-mRNA-1:three_prime_utr;Parent=Msa0570680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
