AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0928940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0928940 MtrunA17_Chr6g0473931 88.415 164 14 1 4 162 8 171 3.08e-84 246
Msa0928940 MtrunA17_Chr6g0474001 75.000 164 31 2 4 162 29 187 1.43e-83 246
Msa0928940 MtrunA17_Chr6g0473961 76.829 164 26 3 4 162 29 185 5.52e-83 243
Msa0928940 MtrunA17_Chr6g0473971 78.659 164 25 2 4 162 29 187 1.11e-80 238
Msa0928940 MtrunA17_Chr6g0473941 84.971 173 12 2 4 162 8 180 3.92e-78 231
Msa0928940 MtrunA17_Chr6g0473981 75.610 164 29 3 4 162 29 186 1.70e-76 228
Msa0928940 MtrunA17_Chr6g0473781 69.186 172 36 4 4 162 32 199 7.25e-74 221
Msa0928940 MtrunA17_Chr6g0473881 71.341 164 36 2 4 162 85 242 3.30e-73 222
Msa0928940 MtrunA17_Chr6g0473741 70.122 164 40 2 4 162 41 200 1.51e-66 202
Msa0928940 MtrunA17_Chr1g0203861 60.736 163 49 3 7 162 22 176 7.03e-54 169
Msa0928940 MtrunA17_Chr6g0473861 71.311 122 30 1 3 119 37 158 1.91e-50 163
Msa0928940 MtrunA17_Chr6g0473791 89.041 73 8 0 4 76 32 104 2.50e-42 138
Msa0928940 MtrunA17_Chr5g0398081 61.062 113 33 2 7 108 27 139 6.36e-41 137
Msa0928940 MtrunA17_Chr6g0473771 69.072 97 25 1 6 97 20 116 2.00e-40 132
Msa0928940 MtrunA17_Chr5g0398091 60.177 113 34 2 7 108 32 144 3.85e-39 132
Msa0928940 MtrunA17_Chr5g0398061 61.111 108 31 2 12 108 32 139 1.55e-38 130
Msa0928940 MtrunA17_Chr4g0057231 65.347 101 27 3 7 99 22 122 6.00e-35 119
Msa0928940 MtrunA17_Chr8g0334801 66.250 80 22 1 24 98 47 126 3.28e-31 111
Msa0928940 MtrunA17_Chr3g0140161 52.381 105 44 2 24 123 38 141 1.41e-29 107
Msa0928940 MtrunA17_Chr7g0265851 43.871 155 77 3 16 160 11 165 1.48e-29 107
Msa0928940 MtrunA17_Chr7g0232261 59.756 82 28 1 22 98 54 135 5.35e-28 103
Msa0928940 MtrunA17_Chr2g0321071 42.038 157 72 5 23 160 41 197 1.11e-27 103
Msa0928940 MtrunA17_Chr5g0399441 59.494 79 27 1 25 98 24 102 7.73e-27 99.8
Msa0928940 MtrunA17_Chr7g0275841 58.750 80 28 1 24 98 23 102 2.31e-25 95.5
Msa0928940 MtrunA17_Chr8g0340311 56.962 79 29 1 25 98 43 121 3.61e-25 95.9
Msa0928940 MtrunA17_Chr8g0390091 53.535 99 41 1 19 112 27 125 1.50e-24 95.1
Msa0928940 MtrunA17_Chr2g0331231 48.148 108 45 3 2 98 8 115 2.20e-24 94.0
Msa0928940 MtrunA17_Chr6g0486701 58.974 78 27 1 26 98 41 118 3.32e-24 94.0
Msa0928940 MtrunA17_Chr4g0055951 59.494 79 27 1 25 98 70 148 4.00e-24 94.4
Msa0928940 MtrunA17_Chr8g0346741 51.064 94 38 2 13 98 23 116 1.70e-23 90.9
Msa0928940 MtrunA17_Chr4g0057241 53.165 79 31 2 25 98 11 88 6.97e-21 84.0
Msa0928940 MtrunA17_Chr1g0146191 55.435 92 32 2 16 98 30 121 1.16e-19 82.8
Msa0928940 MtrunA17_Chr4g0017851 51.807 83 35 1 28 105 117 199 1.96e-19 82.8
Msa0928940 MtrunA17_Chr6g0486711 58.140 86 31 1 25 105 45 130 3.12e-19 81.3
Msa0928940 MtrunA17_Chr5g0437671 52.857 70 29 1 29 98 85 150 7.23e-16 73.6
Msa0928940 MtrunA17_Chr1g0150631 60.377 53 21 0 28 80 37 89 1.36e-15 71.2
Msa0928940 MtrunA17_Chr8g0382491 44.086 93 42 3 13 95 95 187 2.19e-15 71.6
Msa0928940 MtrunA17_Chr3g0134161 51.562 64 30 1 14 77 31 93 2.26e-15 69.7
Msa0928940 MtrunA17_Chr1g0179161 34.731 167 64 7 13 160 3 143 3.66e-15 68.9
Msa0928940 MtrunA17_Chr2g0334031 34.884 129 77 3 17 143 105 228 5.13e-15 71.2
Msa0928940 MtrunA17_Chr3g0099871 55.072 69 28 1 21 89 22 87 6.58e-15 69.3
Msa0928940 MtrunA17_Chr5g0396191 51.648 91 39 1 29 114 11 101 7.54e-15 68.6
Msa0928940 MtrunA17_Chr2g0295421 51.471 68 30 1 13 80 83 147 9.33e-15 69.7
Msa0928940 MtrunA17_Chr2g0316931 57.377 61 24 1 29 89 31 89 9.87e-15 68.6
Msa0928940 MtrunA17_Chr3g0115631 60.377 53 21 0 28 80 149 201 1.02e-14 70.1
Msa0928940 MtrunA17_Chr5g0425561 51.351 74 29 2 28 101 172 238 1.53e-14 69.7
Msa0928940 MtrunA17_Chr8g0375031 61.224 49 19 0 29 77 125 173 1.60e-14 68.6
Msa0928940 MtrunA17_Chr1g0150691 52.542 59 28 0 22 80 15 73 2.29e-14 67.8
Msa0928940 MtrunA17_Chr1g0196781 56.140 57 25 0 24 80 147 203 2.41e-14 68.9
Msa0928940 MtrunA17_Chr7g0257911 62.264 53 20 0 29 81 31 83 2.43e-14 68.9
Msa0928940 MtrunA17_Chr1g0195151 51.613 62 30 0 19 80 67 128 2.56e-14 68.9
Msa0928940 MtrunA17_Chr2g0323171 34.711 121 74 2 29 148 65 181 2.58e-14 67.0
Msa0928940 MtrunA17_Chr5g0437371 63.462 52 19 0 29 80 66 117 3.43e-14 68.6
Msa0928940 MtrunA17_Chr5g0396181 40.594 101 53 2 29 122 21 121 3.68e-14 67.0
Msa0928940 MtrunA17_Chr4g0044911 61.224 49 19 0 29 77 96 144 5.14e-14 67.0
Msa0928940 MtrunA17_Chr7g0221471 54.717 53 24 0 25 77 47 99 5.68e-14 65.9
Msa0928940 MtrunA17_Chr1g0153151 59.184 49 20 0 29 77 44 92 5.98e-14 66.2
Msa0928940 MtrunA17_Chr1g0150671 58.491 53 22 0 28 80 45 97 6.11e-14 67.8
Msa0928940 MtrunA17_Chr4g0063751 46.377 69 37 0 29 97 7 75 6.22e-14 66.6
Msa0928940 MtrunA17_Chr1g0203831 40.845 142 72 5 29 160 57 196 6.52e-14 66.2
Msa0928940 MtrunA17_Chr5g0401871 37.755 98 59 1 29 126 25 120 7.24e-14 65.9
Msa0928940 MtrunA17_Chr1g0150661 56.604 53 23 0 28 80 34 86 1.04e-13 66.2
Msa0928940 MtrunA17_Chr7g0221501 53.571 56 26 0 25 80 47 102 1.12e-13 65.1
Msa0928940 MtrunA17_Chr2g0301191 35.043 117 76 0 28 144 18 134 1.86e-13 65.5
Msa0928940 MtrunA17_Chr8g0344961 51.613 62 30 0 19 80 114 175 2.10e-13 66.6
Msa0928940 MtrunA17_Chr2g0282651 52.542 59 28 0 29 87 70 128 2.17e-13 65.9
Msa0928940 MtrunA17_Chr8g0383591 57.692 52 22 0 29 80 145 196 2.23e-13 66.2
Msa0928940 MtrunA17_Chr5g0396911 45.882 85 36 2 16 94 97 177 2.25e-13 66.2
Msa0928940 MtrunA17_Chr4g0044901 59.184 49 20 0 29 77 96 144 2.30e-13 65.5
Msa0928940 MtrunA17_Chr2g0301171 41.758 91 48 1 28 113 18 108 2.56e-13 64.7
Msa0928940 MtrunA17_Chr4g0044871 59.184 49 20 0 29 77 96 144 2.76e-13 65.1
Msa0928940 MtrunA17_Chr2g0324131 58.491 53 22 0 28 80 217 269 2.87e-13 66.2
Msa0928940 MtrunA17_Chr7g0225131 52.542 59 25 1 22 80 22 77 2.88e-13 62.0
Msa0928940 MtrunA17_Chr1g0158971 48.438 64 33 0 29 92 115 178 3.35e-13 65.9
Msa0928940 MtrunA17_Chr4g0044881 59.184 49 20 0 29 77 114 162 3.44e-13 65.1
Msa0928940 MtrunA17_Chr3g0136551 55.769 52 23 0 29 80 65 116 3.62e-13 65.5
Msa0928940 MtrunA17_Chr3g0137174 63.265 49 18 0 29 77 8 56 4.26e-13 63.9
Msa0928940 MtrunA17_Chr4g0002631 63.265 49 18 0 29 77 8 56 4.32e-13 63.9
Msa0928940 MtrunA17_Chr4g0023411 57.692 52 22 0 29 80 65 116 5.15e-13 63.9
Msa0928940 MtrunA17_Chr3g0114761 46.067 89 39 1 29 108 25 113 5.57e-13 64.3
Msa0928940 MtrunA17_Chr4g0003421 57.692 52 22 0 29 80 40 91 5.68e-13 64.7
Msa0928940 MtrunA17_Chr2g0333011 55.769 52 23 0 29 80 7 58 8.42e-13 62.8
Msa0928940 MtrunA17_Chr1g0186731 58.491 53 21 1 29 80 21 73 1.30e-12 61.6
Msa0928940 MtrunA17_Chr2g0282621 61.224 49 19 0 29 77 15 63 2.08e-12 61.6
Msa0928940 MtrunA17_Chr5g0438831 45.570 79 40 1 9 87 29 104 3.10e-12 62.8
Msa0928940 MtrunA17_Chr3g0126321 49.153 59 30 0 29 87 113 171 3.56e-12 63.2
Msa0928940 MtrunA17_Chr5g0438801 50.847 59 29 0 29 87 51 109 4.56e-12 62.4
Msa0928940 MtrunA17_Chr3g0136541 56.000 50 22 0 31 80 42 91 5.20e-12 61.6
Msa0928940 MtrunA17_Chr8g0367911 49.153 59 30 0 29 87 44 102 5.33e-12 62.4
Msa0928940 MtrunA17_Chr4g0026881 36.607 112 62 4 1 110 74 178 6.24e-12 61.6
Msa0928940 MtrunA17_Chr1g0189941 49.206 63 32 0 18 80 13 75 8.53e-12 60.1
Msa0928940 MtrunA17_Chr1g0170531 50.847 59 26 2 23 80 85 141 1.06e-11 60.8
Msa0928940 MtrunA17_Chr5g0412641 51.667 60 29 0 29 88 46 105 1.89e-11 60.8
Msa0928940 MtrunA17_Chr2g0301181 52.830 53 25 0 28 80 18 70 2.16e-11 60.1
Msa0928940 MtrunA17_Chr1g0186671 56.604 53 22 1 29 80 19 71 2.26e-11 58.2
Msa0928940 MtrunA17_Chr4g0055781 54.237 59 24 2 23 80 98 154 2.30e-11 60.1
Msa0928940 MtrunA17_Chr2g0297331 53.333 60 25 2 29 87 14 71 2.63e-11 58.2
Msa0928940 MtrunA17_Chr4g0046161 42.500 80 43 2 17 95 45 122 2.80e-11 57.8
Msa0928940 MtrunA17_Chr4g0055801 44.737 76 41 1 6 80 131 206 2.92e-11 60.5
Msa0928940 MtrunA17_Chr5g0432821 46.667 60 32 0 25 84 120 179 3.09e-11 60.1
Msa0928940 MtrunA17_Chr8g0387801 44.706 85 38 2 13 88 82 166 3.23e-11 60.1
Msa0928940 MtrunA17_Chr6g0461271 49.231 65 32 1 13 77 18 81 4.64e-11 59.7
Msa0928940 MtrunA17_Chr1g0184081 56.000 50 21 1 29 77 21 70 4.99e-11 57.8
Msa0928940 MtrunA17_Chr2g0283181 43.038 79 44 1 17 94 137 215 5.94e-11 59.3
Msa0928940 MtrunA17_Chr4g0062551 50.000 52 26 0 29 80 53 104 7.50e-11 57.0
Msa0928940 MtrunA17_Chr7g0217991 42.500 80 42 2 13 92 29 104 7.85e-11 59.3
Msa0928940 MtrunA17_Chr7g0253424 55.102 49 22 0 29 77 39 87 8.38e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0928940 AT4G25470.1 57.229 166 54 3 6 160 28 187 8.64e-57 177
Msa0928940 AT4G25480.1 59.146 164 51 3 7 160 29 186 3.58e-54 171
Msa0928940 AT4G25490.1 59.394 165 50 4 7 160 26 184 3.98e-52 165
Msa0928940 AT5G51990.1 55.090 167 60 4 6 160 31 194 4.64e-52 166
Msa0928940 AT1G12610.1 66.972 109 31 1 7 110 8 116 2.86e-45 147
Msa0928940 AT1G63030.2 66.346 104 30 1 12 110 13 116 6.73e-45 146
Msa0928940 AT1G63030.1 66.346 104 30 1 12 110 13 116 6.73e-45 146
Msa0928940 AT2G44940.1 58.065 93 34 1 18 105 89 181 2.94e-28 106
Msa0928940 AT5G25810.1 55.789 95 36 2 18 106 24 118 3.10e-28 104
Msa0928940 AT5G11590.1 44.118 136 71 1 25 155 47 182 3.81e-28 104
Msa0928940 AT2G35700.1 61.250 80 26 1 24 98 40 119 2.47e-27 101
Msa0928940 AT4G32800.1 50.467 107 42 2 16 111 6 112 3.77e-27 102
Msa0928940 AT4G16750.1 50.485 103 41 2 6 98 12 114 1.57e-25 96.7
Msa0928940 AT1G01250.1 57.500 80 29 1 24 98 40 119 1.60e-24 94.4
Msa0928940 AT3G16280.1 58.228 79 28 1 25 98 57 135 3.92e-24 94.4
Msa0928940 AT3G16280.2 58.228 79 28 1 25 98 75 153 6.38e-24 94.4
Msa0928940 AT3G60490.1 56.098 82 30 2 23 98 64 145 2.32e-23 92.8
Msa0928940 AT2G36450.1 39.735 151 82 4 17 160 3 151 4.25e-23 90.5
Msa0928940 AT2G25820.1 59.211 76 26 1 28 98 25 100 1.18e-22 90.1
Msa0928940 AT1G71450.1 44.762 105 53 1 29 128 24 128 1.65e-19 81.3
Msa0928940 AT5G52020.1 46.207 145 63 6 25 160 61 199 1.77e-19 82.0
Msa0928940 AT1G21910.1 45.263 95 36 2 29 109 50 142 1.59e-18 79.7
Msa0928940 AT2G47520.1 28.387 155 96 4 5 156 23 165 3.29e-18 77.4
Msa0928940 AT1G33760.1 51.685 89 38 1 29 112 20 108 2.98e-16 72.4
Msa0928940 AT4G39780.1 57.895 57 24 0 24 80 88 144 8.74e-16 72.8
Msa0928940 AT4G13620.1 59.259 54 22 0 28 81 231 284 1.07e-15 73.6
Msa0928940 AT4G06746.1 44.156 77 38 1 1 77 13 84 1.41e-15 70.1
Msa0928940 AT1G46768.3 59.259 54 21 1 24 77 27 79 1.44e-15 69.7
Msa0928940 AT1G46768.1 59.259 54 21 1 24 77 27 79 1.83e-15 69.7
Msa0928940 AT1G46768.2 59.259 54 21 1 24 77 27 79 1.83e-15 69.7
Msa0928940 AT3G16770.1 53.731 67 27 1 14 80 68 130 5.20e-15 70.5
Msa0928940 AT1G22190.1 53.731 67 29 1 14 80 70 134 5.43e-15 70.5
Msa0928940 AT1G78080.1 47.500 80 39 2 1 80 127 203 7.41e-15 70.9
Msa0928940 AT2G22200.1 49.333 75 31 1 28 95 70 144 7.75e-15 70.1
Msa0928940 AT5G44210.1 55.932 59 26 0 29 87 33 91 7.90e-15 69.3
Msa0928940 AT4G36900.1 56.604 53 23 0 25 77 26 78 8.90e-15 68.9
Msa0928940 AT3G11020.1 53.623 69 28 1 23 91 72 136 1.11e-14 70.5
Msa0928940 AT3G57600.1 52.174 69 33 0 13 81 12 80 1.13e-14 70.1
Msa0928940 AT1G77200.1 55.844 77 29 1 27 98 41 117 1.47e-14 69.3
Msa0928940 AT2G23340.1 59.184 49 20 0 29 77 28 76 2.48e-14 67.4
Msa0928940 AT1G15360.1 50.000 68 34 0 29 96 7 74 2.82e-14 67.8
Msa0928940 AT1G15360.2 50.000 68 34 0 29 96 7 74 2.82e-14 67.8
Msa0928940 AT5G65130.2 52.174 69 31 1 14 80 96 164 2.87e-14 68.9
Msa0928940 AT5G65130.1 52.174 69 31 1 14 80 94 162 3.02e-14 68.9
Msa0928940 AT3G15210.1 63.265 49 18 0 29 77 25 73 3.58e-14 67.8
Msa0928940 AT5G67190.1 57.143 49 21 0 29 77 21 69 3.68e-14 67.0
Msa0928940 AT1G12630.1 41.216 148 74 3 25 160 15 161 5.05e-14 67.0
Msa0928940 AT5G05410.2 61.224 49 19 0 29 77 79 127 5.10e-14 68.6
Msa0928940 AT3G50260.1 51.786 56 27 0 22 77 14 69 5.17e-14 65.9
Msa0928940 AT1G74930.1 45.349 86 42 2 29 109 21 106 5.20e-14 67.0
Msa0928940 AT5G05410.1 55.556 63 24 1 29 91 79 137 5.89e-14 68.6
Msa0928940 AT2G33710.1 56.140 57 25 0 24 80 65 121 6.34e-14 67.0
Msa0928940 AT1G71520.1 34.058 138 70 4 23 152 8 132 6.53e-14 65.5
Msa0928940 AT1G36060.1 57.143 63 23 1 28 90 142 200 6.73e-14 68.2
Msa0928940 AT2G33710.2 56.140 57 25 0 24 80 65 121 7.34e-14 67.0
Msa0928940 AT5G21960.1 60.784 51 20 0 27 77 5 55 1.27e-13 66.2
Msa0928940 AT2G20880.1 58.491 53 22 0 28 80 186 238 1.39e-13 67.4
Msa0928940 AT3G61630.1 47.297 74 38 1 29 102 105 177 2.29e-13 66.6
Msa0928940 AT1G19210.1 57.692 52 22 0 29 80 12 63 2.66e-13 64.7
Msa0928940 AT1G03800.1 48.571 70 33 1 17 86 44 110 3.08e-13 65.5
Msa0928940 AT4G28140.1 56.604 53 23 0 28 80 142 194 3.64e-13 65.9
Msa0928940 AT5G25390.2 41.379 87 44 2 29 115 7 86 3.93e-13 64.3
Msa0928940 AT1G43160.1 38.889 126 69 4 29 153 61 179 5.13e-13 64.3
Msa0928940 AT4G11140.1 44.000 75 38 1 29 103 87 157 5.73e-13 65.5
Msa0928940 AT5G25190.1 50.000 68 29 1 29 91 8 75 6.62e-13 63.5
Msa0928940 AT4G31060.1 40.698 86 45 2 7 88 1 84 1.04e-12 63.2
Msa0928940 AT5G61600.1 52.113 71 31 2 25 94 86 154 1.14e-12 63.9
Msa0928940 AT4G27950.1 59.184 49 20 0 29 77 118 166 1.41e-12 64.7
Msa0928940 AT2G46310.1 46.774 62 33 0 29 90 99 160 1.56e-12 64.3
Msa0928940 AT1G72360.3 39.080 87 51 1 9 95 54 138 1.60e-12 63.9
Msa0928940 AT5G61890.1 56.604 53 21 1 25 77 88 138 1.64e-12 63.5
Msa0928940 AT5G13330.1 56.604 53 21 1 25 77 37 87 1.72e-12 63.2
Msa0928940 AT1G28360.1 49.275 69 33 1 29 97 12 78 2.41e-12 62.4
Msa0928940 AT1G75490.1 53.704 54 25 0 28 81 41 94 2.65e-12 62.4
Msa0928940 AT1G22810.1 54.167 48 22 0 29 76 14 61 2.69e-12 61.2
Msa0928940 AT3G20310.1 54.545 55 25 0 23 77 21 75 3.27e-12 62.8
Msa0928940 AT2G40340.2 39.252 107 43 3 29 135 14 98 3.28e-12 63.2
Msa0928940 AT2G40340.5 39.252 107 43 3 29 135 14 98 3.28e-12 63.2
Msa0928940 AT2G40340.4 39.252 107 43 3 29 135 14 98 3.28e-12 63.2
Msa0928940 AT1G72360.1 41.892 74 41 1 22 95 18 89 3.48e-12 62.4
Msa0928940 AT5G18450.1 56.604 53 23 0 28 80 33 85 4.25e-12 63.2
Msa0928940 AT5G51190.1 55.932 59 23 2 23 80 68 124 4.29e-12 62.0
Msa0928940 AT5G47230.1 51.471 68 32 1 14 80 141 208 5.14e-12 62.8
Msa0928940 AT1G28370.1 57.143 49 21 0 29 77 20 68 5.42e-12 60.8
Msa0928940 AT2G40340.3 39.252 107 43 3 29 135 72 156 5.96e-12 62.4
Msa0928940 AT1G72360.2 41.892 74 41 1 22 95 69 140 6.05e-12 62.4
Msa0928940 AT2G40340.6 39.252 107 43 3 29 135 79 163 6.27e-12 62.8
Msa0928940 AT2G40340.1 39.252 107 43 3 29 135 72 156 7.54e-12 62.4
Msa0928940 AT1G28370.2 57.143 49 21 0 29 77 58 106 7.98e-12 61.2
Msa0928940 AT5G07580.1 51.429 70 29 3 23 91 106 171 9.01e-12 61.2
Msa0928940 AT4G23750.2 48.438 64 32 1 29 92 122 184 9.58e-12 62.4
Msa0928940 AT4G23750.1 48.438 64 32 1 29 92 122 184 9.58e-12 62.4
Msa0928940 AT5G43410.1 53.571 56 25 1 26 80 12 67 1.10e-11 59.3
Msa0928940 AT5G53290.1 50.000 58 29 0 29 86 125 182 1.54e-11 61.6
Msa0928940 AT1G50640.1 59.184 49 20 0 29 77 28 76 1.76e-11 60.5
Msa0928940 AT1G12980.1 51.667 60 29 0 29 88 57 116 2.78e-11 60.8
Msa0928940 AT1G24590.1 50.000 62 31 0 29 90 58 119 3.89e-11 60.5
Msa0928940 AT3G23230.1 54.717 53 23 1 29 80 20 72 4.94e-11 57.8
Msa0928940 AT5G19790.1 57.143 49 21 0 29 77 22 70 6.65e-11 59.3
Msa0928940 AT5G64750.1 37.363 91 48 2 39 125 195 280 7.02e-11 59.7

Find 53 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTAATATATACATATGTTT+AGG 0.215595 6_2:+75364027 None:intergenic
GGAAGAGGAACTTAGATAAA+TGG 0.256718 6_2:+75364138 Msa0928940:CDS
ACGTTGCAGCGATGGCATTA+AGG 0.265866 6_2:+75364246 Msa0928940:CDS
TTTCTCCCTGCTGGTTTCTT+CGG 0.268369 6_2:-75364074 None:intergenic
ATATACAGCTTCTTCGGAAT+TGG 0.294245 6_2:+75365418 Msa0928940:three_prime_UTR
CTAATATATACATATGTTTA+GGG 0.296079 6_2:+75364028 None:intergenic
TTCTCCCTGCTGGTTTCTTC+GGG 0.296529 6_2:-75364073 None:intergenic
TTCATATCTTGAATATTTGA+TGG 0.304471 6_2:+75365488 Msa0928940:three_prime_UTR
CAAATCCTAGTCTTCTTGTT+TGG 0.307227 6_2:-75364179 None:intergenic
GCCAGAGTTGTGGAGGAATA+TGG 0.338237 6_2:+75364511 Msa0928940:CDS
TTGAACTTCTTTCTCCCTGC+TGG 0.362673 6_2:-75364083 None:intergenic
CGTTGCAGCGATGGCATTAA+GGG 0.377499 6_2:+75364247 Msa0928940:CDS
TCGCTGCAACGTCGTGTGCT+CGG 0.389912 6_2:-75364235 None:intergenic
CGCTGCAACGTCGTGTGCTC+GGG 0.398592 6_2:-75364234 None:intergenic
ATTAATATATACAGCTTCTT+CGG 0.423201 6_2:+75365412 Msa0928940:three_prime_UTR
CAAACAAGAAGACTAGGATT+TGG 0.429238 6_2:+75364180 Msa0928940:CDS
GAAGAGGAACTTAGATAAAT+GGG 0.434368 6_2:+75364139 Msa0928940:CDS
TGTATAGAGGTGTGAGGAAG+AGG 0.474025 6_2:+75364123 Msa0928940:CDS
GTAGTCGTTAAAGTCTTGTC+TGG 0.505167 6_2:-75364383 None:intergenic
GCCATATTCCTCCACAACTC+TGG 0.506491 6_2:-75364512 None:intergenic
CTGAAACAAAAGACATTCAA+AGG 0.509319 6_2:+75364330 Msa0928940:CDS
CGGGCAGCCATCTCAGCCGT+TGG 0.512810 6_2:-75364215 None:intergenic
GGCAGCTGCAGAAGCCGCTG+AGG 0.513356 6_2:+75364352 Msa0928940:CDS
TGTGGAAGTCGAAGAAGAAG+AGG 0.518171 6_2:+75364475 Msa0928940:CDS
AGCACACGACGTTGCAGCGA+TGG 0.528674 6_2:+75364238 Msa0928940:CDS
TACTGACATTGACACGGTTG+TGG 0.536605 6_2:+75364403 Msa0928940:CDS
TGTCGTTGCAGTCGAAGAAG+AGG 0.540894 6_2:+75364430 Msa0928940:CDS
AGCAGGGAGAAAGAAGTTCA+AGG 0.543304 6_2:+75364085 Msa0928940:CDS
AGTTGCCCGAAGAAACCAGC+AGG 0.545231 6_2:+75364068 Msa0928940:CDS
AAGAAGACTAGGATTTGGCT+AGG 0.552639 6_2:+75364185 Msa0928940:CDS
GTTCAAGGAGACTCGCCACC+CGG 0.557277 6_2:+75364100 Msa0928940:CDS
GTTTCAGCAGAGGCAGGAGT+AGG 0.561690 6_2:-75364314 None:intergenic
GTTTAGGGAGGGGCAATTAG+CGG 0.561963 6_2:+75364043 Msa0928940:CDS
TATATACATATGTTTAGGGA+GGG 0.562832 6_2:+75364032 None:intergenic
ATATACATATGTTTAGGGAG+GGG 0.565127 6_2:+75364033 None:intergenic
GAGAACCAAACAAGAAGACT+AGG 0.577385 6_2:+75364174 Msa0928940:CDS
TTCCTCACACCTCTATACAC+CGG 0.578151 6_2:-75364119 None:intergenic
TCCTCACACCTCTATACACC+GGG 0.580421 6_2:-75364118 None:intergenic
TGAAACAAAAGACATTCAAA+GGG 0.589399 6_2:+75364331 Msa0928940:CDS
AACGACTACTGACATTGACA+CGG 0.611733 6_2:+75364397 Msa0928940:CDS
TGTTGAATATGCCAGAGTTG+TGG 0.615027 6_2:+75364501 Msa0928940:CDS
AAACTTAATCACTACAATTG+CGG 0.620324 6_2:-75365358 None:intergenic
ATATATACATATGTTTAGGG+AGG 0.634372 6_2:+75364031 None:intergenic
GTTGCAGCGATGGCATTAAG+GGG 0.638430 6_2:+75364248 Msa0928940:CDS
AGAAGACTAGGATTTGGCTA+GGG 0.661545 6_2:+75364186 Msa0928940:CDS
TTCTTCGACTGCAACGACAA+CGG 0.675808 6_2:-75364426 None:intergenic
GTCTGGTCTGAAAGCCTCAG+CGG 0.676858 6_2:-75364366 None:intergenic
TGAATATGCCAGAGTTGTGG+AGG 0.686416 6_2:+75364504 Msa0928940:CDS
CAAAATTGAGACAGGCGTAG+CGG 0.688544 6_2:-75364271 None:intergenic
TAATTATGAAGAAACACATG+AGG 0.690127 6_2:-75365393 None:intergenic
ACCCGGTGTATAGAGGTGTG+AGG 0.705873 6_2:+75364117 Msa0928940:CDS
TCACACCTCTATACACCGGG+TGG 0.726886 6_2:-75364115 None:intergenic
GTTGCCCGAAGAAACCAGCA+GGG 0.737979 6_2:+75364069 Msa0928940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAGAATAATAAAACTT+TGG + chr6_2:75365116-75365135 Msa0928940:intron 10.0%
!! ATAAAAGAATAATAAAACTT+TGG + chr6_2:75365116-75365135 Msa0928940:intron 10.0%
!!! GTAATAACTTTTTTTTTTTG+TGG + chr6_2:75364972-75364991 Msa0928940:intron 15.0%
!! TTGTGAATATAATTACTAAT+TGG + chr6_2:75365060-75365079 Msa0928940:intron 15.0%
!! TGTGAATATAATTACTAATT+GGG + chr6_2:75365061-75365080 Msa0928940:intron 15.0%
!!! GTAATAACTTTTTTTTTTTG+TGG + chr6_2:75364972-75364991 Msa0928940:intron 15.0%
!! TTGTGAATATAATTACTAAT+TGG + chr6_2:75365060-75365079 Msa0928940:intron 15.0%
!! TGTGAATATAATTACTAATT+GGG + chr6_2:75365061-75365080 Msa0928940:intron 15.0%
!!! TGTTTTTTTAGATTGTAGAA+TGG + chr6_2:75364650-75364669 Msa0928940:intron 20.0%
!!! TATACTACAATTTTTGTTAG+TGG + chr6_2:75364681-75364700 Msa0928940:intron 20.0%
!! TCAAAATCCGTATAAATATA+CGG - chr6_2:75364759-75364778 None:intergenic 20.0%
!! TATATTGATATACAACAAGT+TGG + chr6_2:75364909-75364928 Msa0928940:intron 20.0%
!! TATGTATTAATATTGACCTT+TGG + chr6_2:75365157-75365176 Msa0928940:intron 20.0%
!! TATTCATCAACAAAAAAAGA+AGG + chr6_2:75365180-75365199 Msa0928940:intron 20.0%
!! ATTAATATATACAGCTTCTT+CGG + chr6_2:75365412-75365431 Msa0928940:three_prime_UTR 20.0%
!!! TGTTTTTTTAGATTGTAGAA+TGG + chr6_2:75364650-75364669 Msa0928940:intron 20.0%
!!! TATACTACAATTTTTGTTAG+TGG + chr6_2:75364681-75364700 Msa0928940:intron 20.0%
!! TCAAAATCCGTATAAATATA+CGG - chr6_2:75364759-75364778 None:intergenic 20.0%
!! TATATTGATATACAACAAGT+TGG + chr6_2:75364909-75364928 Msa0928940:intron 20.0%
!! TATGTATTAATATTGACCTT+TGG + chr6_2:75365157-75365176 Msa0928940:intron 20.0%
!! TATTCATCAACAAAAAAAGA+AGG + chr6_2:75365180-75365199 Msa0928940:intron 20.0%
!! ATTAATATATACAGCTTCTT+CGG + chr6_2:75365412-75365431 Msa0928940:three_prime_UTR 20.0%
! TGAAACAAAAGACATTCAAA+GGG + chr6_2:75364331-75364350 Msa0928940:CDS 25.0%
!! TACAATTTTTGTTAGTGGTA+TGG + chr6_2:75364686-75364705 Msa0928940:intron 25.0%
!!! ATGTTTTGTTTACACAGTTT+AGG + chr6_2:75364724-75364743 Msa0928940:intron 25.0%
!! ACAAGTACCGTATATTTATA+CGG + chr6_2:75364749-75364768 Msa0928940:intron 25.0%
!!! TTTTTGTTGATGAATACCAA+AGG - chr6_2:75365176-75365195 None:intergenic 25.0%
! TAGCTAATTGCAATATATTG+AGG + chr6_2:75365242-75365261 Msa0928940:intron 25.0%
! AGCTAATTGCAATATATTGA+GGG + chr6_2:75365243-75365262 Msa0928940:intron 25.0%
! AAAAATCAGTTACAATGACT+TGG + chr6_2:75365328-75365347 Msa0928940:three_prime_UTR 25.0%
! AAACTTAATCACTACAATTG+CGG - chr6_2:75365361-75365380 None:intergenic 25.0%
! TAATTATGAAGAAACACATG+AGG - chr6_2:75365396-75365415 None:intergenic 25.0%
! TGAAACAAAAGACATTCAAA+GGG + chr6_2:75364331-75364350 Msa0928940:CDS 25.0%
!! TACAATTTTTGTTAGTGGTA+TGG + chr6_2:75364686-75364705 Msa0928940:intron 25.0%
!!! ATGTTTTGTTTACACAGTTT+AGG + chr6_2:75364724-75364743 Msa0928940:intron 25.0%
!! ACAAGTACCGTATATTTATA+CGG + chr6_2:75364749-75364768 Msa0928940:intron 25.0%
!!! TTTTTGTTGATGAATACCAA+AGG - chr6_2:75365176-75365195 None:intergenic 25.0%
! TAGCTAATTGCAATATATTG+AGG + chr6_2:75365242-75365261 Msa0928940:intron 25.0%
! AGCTAATTGCAATATATTGA+GGG + chr6_2:75365243-75365262 Msa0928940:intron 25.0%
! AAAAATCAGTTACAATGACT+TGG + chr6_2:75365328-75365347 Msa0928940:three_prime_UTR 25.0%
! AAACTTAATCACTACAATTG+CGG - chr6_2:75365361-75365380 None:intergenic 25.0%
! TAATTATGAAGAAACACATG+AGG - chr6_2:75365396-75365415 None:intergenic 25.0%
GAAGAGGAACTTAGATAAAT+GGG + chr6_2:75364139-75364158 Msa0928940:CDS 30.0%
CTGAAACAAAAGACATTCAA+AGG + chr6_2:75364330-75364349 Msa0928940:CDS 30.0%
TGTACAATTTCAAGATGAAG+AGG + chr6_2:75364583-75364602 Msa0928940:intron 30.0%
!! ACTTCTAAAGTTGAAGTGTT+TGG + chr6_2:75364618-75364637 Msa0928940:intron 30.0%
! CAACAAGTTGGAATTTCAAA+AGG + chr6_2:75364921-75364940 Msa0928940:intron 30.0%
TGCACAATATATGTAAGATC+CGG - chr6_2:75365014-75365033 None:intergenic 30.0%
TTGATTGCAATTTCAACTGT+TGG + chr6_2:75365206-75365225 Msa0928940:intron 30.0%
!!! TTTTTTCTCTTCTCTTTTGC+AGG + chr6_2:75365297-75365316 Msa0928940:intron 30.0%
GAAGAGGAACTTAGATAAAT+GGG + chr6_2:75364139-75364158 Msa0928940:CDS 30.0%
CTGAAACAAAAGACATTCAA+AGG + chr6_2:75364330-75364349 Msa0928940:CDS 30.0%
TGTACAATTTCAAGATGAAG+AGG + chr6_2:75364583-75364602 Msa0928940:intron 30.0%
!! ACTTCTAAAGTTGAAGTGTT+TGG + chr6_2:75364618-75364637 Msa0928940:intron 30.0%
! CAACAAGTTGGAATTTCAAA+AGG + chr6_2:75364921-75364940 Msa0928940:intron 30.0%
TGCACAATATATGTAAGATC+CGG - chr6_2:75365014-75365033 None:intergenic 30.0%
TTGATTGCAATTTCAACTGT+TGG + chr6_2:75365206-75365225 Msa0928940:intron 30.0%
!!! TTTTTTCTCTTCTCTTTTGC+AGG + chr6_2:75365297-75365316 Msa0928940:intron 30.0%
GGAAGAGGAACTTAGATAAA+TGG + chr6_2:75364138-75364157 Msa0928940:CDS 35.0%
! CAAATCCTAGTCTTCTTGTT+TGG - chr6_2:75364182-75364201 None:intergenic 35.0%
CAAACAAGAAGACTAGGATT+TGG + chr6_2:75364180-75364199 Msa0928940:CDS 35.0%
!! AATGTCTTTTGTTTCAGCAG+AGG - chr6_2:75364327-75364346 None:intergenic 35.0%
!! AGTGCTGAATATGTTTTGTG+TGG + chr6_2:75364457-75364476 Msa0928940:CDS 35.0%
ATATACAGCTTCTTCGGAAT+TGG + chr6_2:75365418-75365437 Msa0928940:three_prime_UTR 35.0%
GGAAGAGGAACTTAGATAAA+TGG + chr6_2:75364138-75364157 Msa0928940:CDS 35.0%
! CAAATCCTAGTCTTCTTGTT+TGG - chr6_2:75364182-75364201 None:intergenic 35.0%
CAAACAAGAAGACTAGGATT+TGG + chr6_2:75364180-75364199 Msa0928940:CDS 35.0%
!! AATGTCTTTTGTTTCAGCAG+AGG - chr6_2:75364327-75364346 None:intergenic 35.0%
!! AGTGCTGAATATGTTTTGTG+TGG + chr6_2:75364457-75364476 Msa0928940:CDS 35.0%
ATATACAGCTTCTTCGGAAT+TGG + chr6_2:75365418-75365437 Msa0928940:three_prime_UTR 35.0%
GAGAACCAAACAAGAAGACT+AGG + chr6_2:75364174-75364193 Msa0928940:CDS 40.0%
AAGAAGACTAGGATTTGGCT+AGG + chr6_2:75364185-75364204 Msa0928940:CDS 40.0%
AGAAGACTAGGATTTGGCTA+GGG + chr6_2:75364186-75364205 Msa0928940:CDS 40.0%
! CTGTCTCAATTTTGCAGACT+CGG + chr6_2:75364280-75364299 Msa0928940:intron 40.0%
! GTAGTCGTTAAAGTCTTGTC+TGG - chr6_2:75364386-75364405 None:intergenic 40.0%
AACGACTACTGACATTGACA+CGG + chr6_2:75364397-75364416 Msa0928940:CDS 40.0%
TGTTGAATATGCCAGAGTTG+TGG + chr6_2:75364501-75364520 Msa0928940:CDS 40.0%
AATGTCCCCTACACATAGTT+TGG + chr6_2:75364538-75364557 Msa0928940:intron 40.0%
!! AAGATGAAGAGGTATCGCTA+TGG + chr6_2:75364594-75364613 Msa0928940:intron 40.0%
!! AAGTCCACACTCGTTGATTT+AGG + chr6_2:75364836-75364855 Msa0928940:intron 40.0%
!! AGTCCACACTCGTTGATTTA+GGG + chr6_2:75364837-75364856 Msa0928940:intron 40.0%
!! TGATTTAGGGTGTTGAGATG+TGG + chr6_2:75364850-75364869 Msa0928940:intron 40.0%
TGGTGATCGAAGTTTAACTC+CGG + chr6_2:75364992-75365011 Msa0928940:intron 40.0%
TCACAATAGCTTAGCTCAGT+TGG - chr6_2:75365046-75365065 None:intergenic 40.0%
CAATTTCAACTGTTGGCGTT+TGG + chr6_2:75365213-75365232 Msa0928940:intron 40.0%
GAGAACCAAACAAGAAGACT+AGG + chr6_2:75364174-75364193 Msa0928940:CDS 40.0%
AAGAAGACTAGGATTTGGCT+AGG + chr6_2:75364185-75364204 Msa0928940:CDS 40.0%
AGAAGACTAGGATTTGGCTA+GGG + chr6_2:75364186-75364205 Msa0928940:CDS 40.0%
! CTGTCTCAATTTTGCAGACT+CGG + chr6_2:75364280-75364299 Msa0928940:intron 40.0%
! GTAGTCGTTAAAGTCTTGTC+TGG - chr6_2:75364386-75364405 None:intergenic 40.0%
AACGACTACTGACATTGACA+CGG + chr6_2:75364397-75364416 Msa0928940:CDS 40.0%
TGTTGAATATGCCAGAGTTG+TGG + chr6_2:75364501-75364520 Msa0928940:CDS 40.0%
AATGTCCCCTACACATAGTT+TGG + chr6_2:75364538-75364557 Msa0928940:intron 40.0%
!! AAGATGAAGAGGTATCGCTA+TGG + chr6_2:75364594-75364613 Msa0928940:intron 40.0%
!! AAGTCCACACTCGTTGATTT+AGG + chr6_2:75364836-75364855 Msa0928940:intron 40.0%
!! AGTCCACACTCGTTGATTTA+GGG + chr6_2:75364837-75364856 Msa0928940:intron 40.0%
!! TGATTTAGGGTGTTGAGATG+TGG + chr6_2:75364850-75364869 Msa0928940:intron 40.0%
TGGTGATCGAAGTTTAACTC+CGG + chr6_2:75364992-75365011 Msa0928940:intron 40.0%
TCACAATAGCTTAGCTCAGT+TGG - chr6_2:75365046-75365065 None:intergenic 40.0%
CAATTTCAACTGTTGGCGTT+TGG + chr6_2:75365213-75365232 Msa0928940:intron 40.0%
!! TTTCTCCCTGCTGGTTTCTT+CGG - chr6_2:75364077-75364096 None:intergenic 45.0%
TTGAACTTCTTTCTCCCTGC+TGG - chr6_2:75364086-75364105 None:intergenic 45.0%
AGCAGGGAGAAAGAAGTTCA+AGG + chr6_2:75364085-75364104 Msa0928940:CDS 45.0%
TTCCTCACACCTCTATACAC+CGG - chr6_2:75364122-75364141 None:intergenic 45.0%
! TGTATAGAGGTGTGAGGAAG+AGG + chr6_2:75364123-75364142 Msa0928940:CDS 45.0%
! TTGGCTAGGGACTTTTCCAA+CGG + chr6_2:75364199-75364218 Msa0928940:CDS 45.0%
CAAAATTGAGACAGGCGTAG+CGG - chr6_2:75364274-75364293 None:intergenic 45.0%
CGAGTCTGCAAAATTGAGAC+AGG - chr6_2:75364282-75364301 None:intergenic 45.0%
!!! TCAATTTTGCAGACTCGGTG+TGG + chr6_2:75364285-75364304 Msa0928940:intron 45.0%
!! TCTTTTGTTTCAGCAGAGGC+AGG - chr6_2:75364323-75364342 None:intergenic 45.0%
TACTGACATTGACACGGTTG+TGG + chr6_2:75364403-75364422 Msa0928940:CDS 45.0%
TTCTTCGACTGCAACGACAA+CGG - chr6_2:75364429-75364448 None:intergenic 45.0%
TGTGGAAGTCGAAGAAGAAG+AGG + chr6_2:75364475-75364494 Msa0928940:CDS 45.0%
TGAATATGCCAGAGTTGTGG+AGG + chr6_2:75364504-75364523 Msa0928940:CDS 45.0%
GTGCACCAAACTATGTGTAG+GGG - chr6_2:75364546-75364565 None:intergenic 45.0%
CGTGCACCAAACTATGTGTA+GGG - chr6_2:75364547-75364566 None:intergenic 45.0%
TCGTGCACCAAACTATGTGT+AGG - chr6_2:75364548-75364567 None:intergenic 45.0%
TCAACGAGTGTGGACTTCTT+CGG - chr6_2:75364833-75364852 None:intergenic 45.0%
ACACCCTAAATCAACGAGTG+TGG - chr6_2:75364843-75364862 None:intergenic 45.0%
!! TTTCTCCCTGCTGGTTTCTT+CGG - chr6_2:75364077-75364096 None:intergenic 45.0%
TTGAACTTCTTTCTCCCTGC+TGG - chr6_2:75364086-75364105 None:intergenic 45.0%
AGCAGGGAGAAAGAAGTTCA+AGG + chr6_2:75364085-75364104 Msa0928940:CDS 45.0%
TTCCTCACACCTCTATACAC+CGG - chr6_2:75364122-75364141 None:intergenic 45.0%
! TGTATAGAGGTGTGAGGAAG+AGG + chr6_2:75364123-75364142 Msa0928940:CDS 45.0%
! TTGGCTAGGGACTTTTCCAA+CGG + chr6_2:75364199-75364218 Msa0928940:CDS 45.0%
CAAAATTGAGACAGGCGTAG+CGG - chr6_2:75364274-75364293 None:intergenic 45.0%
CGAGTCTGCAAAATTGAGAC+AGG - chr6_2:75364282-75364301 None:intergenic 45.0%
!!! TCAATTTTGCAGACTCGGTG+TGG + chr6_2:75364285-75364304 Msa0928940:intron 45.0%
!! TCTTTTGTTTCAGCAGAGGC+AGG - chr6_2:75364323-75364342 None:intergenic 45.0%
TACTGACATTGACACGGTTG+TGG + chr6_2:75364403-75364422 Msa0928940:CDS 45.0%
TTCTTCGACTGCAACGACAA+CGG - chr6_2:75364429-75364448 None:intergenic 45.0%
TGTGGAAGTCGAAGAAGAAG+AGG + chr6_2:75364475-75364494 Msa0928940:CDS 45.0%
TGAATATGCCAGAGTTGTGG+AGG + chr6_2:75364504-75364523 Msa0928940:CDS 45.0%
GTGCACCAAACTATGTGTAG+GGG - chr6_2:75364546-75364565 None:intergenic 45.0%
CGTGCACCAAACTATGTGTA+GGG - chr6_2:75364547-75364566 None:intergenic 45.0%
TCGTGCACCAAACTATGTGT+AGG - chr6_2:75364548-75364567 None:intergenic 45.0%
TCAACGAGTGTGGACTTCTT+CGG - chr6_2:75364833-75364852 None:intergenic 45.0%
ACACCCTAAATCAACGAGTG+TGG - chr6_2:75364843-75364862 None:intergenic 45.0%
GTTTAGGGAGGGGCAATTAG+CGG + chr6_2:75364043-75364062 Msa0928940:CDS 50.0%
!! TTCTCCCTGCTGGTTTCTTC+GGG - chr6_2:75364076-75364095 None:intergenic 50.0%
TCCTCACACCTCTATACACC+GGG - chr6_2:75364121-75364140 None:intergenic 50.0%
! GACTTTTCCAACGGCTGAGA+TGG + chr6_2:75364208-75364227 Msa0928940:CDS 50.0%
ACGTTGCAGCGATGGCATTA+AGG + chr6_2:75364246-75364265 Msa0928940:CDS 50.0%
CGTTGCAGCGATGGCATTAA+GGG + chr6_2:75364247-75364266 Msa0928940:CDS 50.0%
GTTGCAGCGATGGCATTAAG+GGG + chr6_2:75364248-75364267 Msa0928940:CDS 50.0%
!!! ATTTTGCAGACTCGGTGTGG+AGG + chr6_2:75364288-75364307 Msa0928940:intron 50.0%
TGTCGTTGCAGTCGAAGAAG+AGG + chr6_2:75364430-75364449 Msa0928940:CDS 50.0%
GCCAGAGTTGTGGAGGAATA+TGG + chr6_2:75364511-75364530 Msa0928940:CDS 50.0%
GCCATATTCCTCCACAACTC+TGG - chr6_2:75364515-75364534 None:intergenic 50.0%
GTTTAGGGAGGGGCAATTAG+CGG + chr6_2:75364043-75364062 Msa0928940:CDS 50.0%
!! TTCTCCCTGCTGGTTTCTTC+GGG - chr6_2:75364076-75364095 None:intergenic 50.0%
TCCTCACACCTCTATACACC+GGG - chr6_2:75364121-75364140 None:intergenic 50.0%
! GACTTTTCCAACGGCTGAGA+TGG + chr6_2:75364208-75364227 Msa0928940:CDS 50.0%
ACGTTGCAGCGATGGCATTA+AGG + chr6_2:75364246-75364265 Msa0928940:CDS 50.0%
CGTTGCAGCGATGGCATTAA+GGG + chr6_2:75364247-75364266 Msa0928940:CDS 50.0%
GTTGCAGCGATGGCATTAAG+GGG + chr6_2:75364248-75364267 Msa0928940:CDS 50.0%
!!! ATTTTGCAGACTCGGTGTGG+AGG + chr6_2:75364288-75364307 Msa0928940:intron 50.0%
TGTCGTTGCAGTCGAAGAAG+AGG + chr6_2:75364430-75364449 Msa0928940:CDS 50.0%
GCCAGAGTTGTGGAGGAATA+TGG + chr6_2:75364511-75364530 Msa0928940:CDS 50.0%
GCCATATTCCTCCACAACTC+TGG - chr6_2:75364515-75364534 None:intergenic 50.0%
AGTTGCCCGAAGAAACCAGC+AGG + chr6_2:75364068-75364087 Msa0928940:CDS 55.0%
GTTGCCCGAAGAAACCAGCA+GGG + chr6_2:75364069-75364088 Msa0928940:CDS 55.0%
TCACACCTCTATACACCGGG+TGG - chr6_2:75364118-75364137 None:intergenic 55.0%
! ACCCGGTGTATAGAGGTGTG+AGG + chr6_2:75364117-75364136 Msa0928940:CDS 55.0%
GTTTCAGCAGAGGCAGGAGT+AGG - chr6_2:75364317-75364336 None:intergenic 55.0%
GTCTGGTCTGAAAGCCTCAG+CGG - chr6_2:75364369-75364388 None:intergenic 55.0%
AGTTGCCCGAAGAAACCAGC+AGG + chr6_2:75364068-75364087 Msa0928940:CDS 55.0%
GTTGCCCGAAGAAACCAGCA+GGG + chr6_2:75364069-75364088 Msa0928940:CDS 55.0%
TCACACCTCTATACACCGGG+TGG - chr6_2:75364118-75364137 None:intergenic 55.0%
! ACCCGGTGTATAGAGGTGTG+AGG + chr6_2:75364117-75364136 Msa0928940:CDS 55.0%
GTTTCAGCAGAGGCAGGAGT+AGG - chr6_2:75364317-75364336 None:intergenic 55.0%
GTCTGGTCTGAAAGCCTCAG+CGG - chr6_2:75364369-75364388 None:intergenic 55.0%
GTTCAAGGAGACTCGCCACC+CGG + chr6_2:75364100-75364119 Msa0928940:CDS 60.0%
ACTCGCCACCCGGTGTATAG+AGG + chr6_2:75364110-75364129 Msa0928940:CDS 60.0%
TCGCTGCAACGTCGTGTGCT+CGG - chr6_2:75364238-75364257 None:intergenic 60.0%
AGCACACGACGTTGCAGCGA+TGG + chr6_2:75364238-75364257 Msa0928940:CDS 60.0%
GTTCAAGGAGACTCGCCACC+CGG + chr6_2:75364100-75364119 Msa0928940:CDS 60.0%
ACTCGCCACCCGGTGTATAG+AGG + chr6_2:75364110-75364129 Msa0928940:CDS 60.0%
TCGCTGCAACGTCGTGTGCT+CGG - chr6_2:75364238-75364257 None:intergenic 60.0%
AGCACACGACGTTGCAGCGA+TGG + chr6_2:75364238-75364257 Msa0928940:CDS 60.0%
CGCTGCAACGTCGTGTGCTC+GGG - chr6_2:75364237-75364256 None:intergenic 65.0%
CGCTGCAACGTCGTGTGCTC+GGG - chr6_2:75364237-75364256 None:intergenic 65.0%
CGGGCAGCCATCTCAGCCGT+TGG - chr6_2:75364218-75364237 None:intergenic 70.0%
GGCAGCTGCAGAAGCCGCTG+AGG + chr6_2:75364352-75364371 Msa0928940:CDS 70.0%
CGGGCAGCCATCTCAGCCGT+TGG - chr6_2:75364218-75364237 None:intergenic 70.0%
GGCAGCTGCAGAAGCCGCTG+AGG + chr6_2:75364352-75364371 Msa0928940:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 75364041 75365507 75364041 ID=Msa0928940;Name=Msa0928940
chr6_2 mRNA 75364041 75365507 75364041 ID=Msa0928940-mRNA-1;Parent=Msa0928940;Name=Msa0928940-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0.33|1|0|0|3|182|163
chr6_2 exon 75364041 75364281 75364041 ID=Msa0928940-mRNA-1:exon:12815;Parent=Msa0928940-mRNA-1
chr6_2 exon 75364297 75364540 75364297 ID=Msa0928940-mRNA-1:exon:12816;Parent=Msa0928940-mRNA-1
chr6_2 exon 75365319 75365507 75365319 ID=Msa0928940-mRNA-1:exon:12817;Parent=Msa0928940-mRNA-1
chr6_2 CDS 75364041 75364281 75364041 ID=Msa0928940-mRNA-1:cds;Parent=Msa0928940-mRNA-1
chr6_2 CDS 75364297 75364540 75364297 ID=Msa0928940-mRNA-1:cds;Parent=Msa0928940-mRNA-1
chr6_2 CDS 75365319 75365325 75365319 ID=Msa0928940-mRNA-1:cds;Parent=Msa0928940-mRNA-1
chr6_2 three_prime_UTR 75365326 75365507 75365326 ID=Msa0928940-mRNA-1:three_prime_utr;Parent=Msa0928940-mRNA-1
Gene Sequence

>Msa0928940

ATGTTTAGGGAGGGGCAATTAGCGGCAAGTTGCCCGAAGAAACCAGCAGGGAGAAAGAAGTTCAAGGAGACTCGCCACCCGGTGTATAGAGGTGTGAGGAAGAGGAACTTAGATAAATGGGTGTGTGAAATGAGAGAACCAAACAAGAAGACTAGGATTTGGCTAGGGACTTTTCCAACGGCTGAGATGGCTGCCCGAGCACACGACGTTGCAGCGATGGCATTAAGGGGCCGCTACGCCTACTCGGTGTGGAGGCTTCCTACTCCTGCCTCTGCTGAAACAAAAGACATTCAAAGGGCAGCTGCAGAAGCCGCTGAGGCTTTCAGACCAGACAAGACTTTAACGACTACTGACATTGACACGGTTGTGGCCGTTGTCGTTGCAGTCGAAGAAGAGGAAGAAGTGCTGAATATGTTTTGTGTGGAAGTCGAAGAAGAAGAGGAAGTGTTGAATATGCCAGAGTTGTGGAGGAATATGGCACTAATGTATTAA
Protein sequence

>Msa0928940

MFREGQLAASCPKKPAGRKKFKETRHPVYRGVRKRNLDKWVCEMREPNKKTRIWLGTFPTAEMAARAHDVAAMALRGRYAYSVWRLPTPASAETKDIQRAAAEAAEAFRPDKTLTTTDIDTVVAVVVAVEEEEEVLNMFCVEVEEEEEVLNMPELWRNMALMY*