Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197030 | XP_013462892.1 | 96.532 | 173 | 6 | 0 | 1 | 173 | 1 | 173 | 1.19e-122 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197030 | sp|Q94AU9|RBCX1_ARATH | 70.270 | 148 | 41 | 2 | 25 | 172 | 27 | 171 | 2.86e-71 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197030 | A0A072V552 | 96.532 | 173 | 6 | 0 | 1 | 173 | 1 | 173 | 5.70e-123 | 353 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012380 | Msa0197030 | 0.865674 | 4.976148e-65 | -8.615850e-47 |
| Msa0014410 | Msa0197030 | 0.858205 | 9.663136e-63 | -8.615850e-47 |
| Msa0034940 | Msa0197030 | 0.808048 | 3.750928e-50 | -8.615850e-47 |
| Msa0044180 | Msa0197030 | 0.842511 | 2.473635e-58 | -8.615850e-47 |
| Msa0064550 | Msa0197030 | 0.846395 | 2.232002e-59 | -8.615850e-47 |
| Msa0090860 | Msa0197030 | 0.805709 | 1.171225e-49 | -8.615850e-47 |
| Msa0108070 | Msa0197030 | 0.866199 | 3.393845e-65 | -8.615850e-47 |
| Msa0109490 | Msa0197030 | 0.820446 | 6.828390e-53 | -8.615850e-47 |
| Msa0127580 | Msa0197030 | -0.804768 | 1.843647e-49 | -8.615850e-47 |
| Msa0140290 | Msa0197030 | 0.826024 | 3.404433e-54 | -8.615850e-47 |
| Msa0154200 | Msa0197030 | 0.802929 | 4.443194e-49 | -8.615850e-47 |
| Msa0154220 | Msa0197030 | 0.851148 | 1.072017e-60 | -8.615850e-47 |
| Msa0154240 | Msa0197030 | 0.865389 | 6.117303e-65 | -8.615850e-47 |
| Msa0154270 | Msa0197030 | 0.903109 | 4.870751e-79 | -8.615850e-47 |
| Msa0166570 | Msa0197030 | 0.808129 | 3.604271e-50 | -8.615850e-47 |
| Msa0171920 | Msa0197030 | 0.803671 | 3.119081e-49 | -8.615850e-47 |
| Msa0172180 | Msa0197030 | -0.815111 | 1.093072e-51 | -8.615850e-47 |
| Msa0175670 | Msa0197030 | 0.808726 | 2.688689e-50 | -8.615850e-47 |
| Msa0175810 | Msa0197030 | 0.803213 | 3.881403e-49 | -8.615850e-47 |
| Msa0183560 | Msa0197030 | 0.831363 | 1.741751e-55 | -8.615850e-47 |
| Msa0187980 | Msa0197030 | 0.841993 | 3.390980e-58 | -8.615850e-47 |
| Msa0197030 | Msa0199740 | 0.800540 | 1.373706e-48 | -8.615850e-47 |
| Msa0197030 | Msa0202740 | 0.810059 | 1.391120e-50 | -8.615850e-47 |
| Msa0197030 | Msa0218530 | -0.800028 | 1.746391e-48 | -8.615850e-47 |
| Msa0197030 | Msa0238860 | 0.939338 | 1.504688e-99 | -8.615850e-47 |
| Msa0197030 | Msa0253160 | 0.827465 | 1.541714e-54 | -8.615850e-47 |
| Msa0197030 | Msa0258700 | -0.818597 | 1.804291e-52 | -8.615850e-47 |
| Msa0197030 | Msa0260190 | 0.810722 | 1.000682e-50 | -8.615850e-47 |
| Msa0197030 | Msa0265580 | 0.806486 | 8.037818e-50 | -8.615850e-47 |
| Msa0197030 | Msa0276590 | 0.954594 | 2.082309e-112 | -8.615850e-47 |
| Msa0197030 | Msa0291940 | 0.822118 | 2.810436e-53 | -8.615850e-47 |
| Msa0197030 | Msa0297370 | -0.803887 | 2.812290e-49 | -8.615850e-47 |
| Msa0197030 | Msa0303440 | 0.827449 | 1.555197e-54 | -8.615850e-47 |
| Msa0197030 | Msa0303500 | 0.807354 | 5.266289e-50 | -8.615850e-47 |
| Msa0197030 | Msa0308570 | 0.810424 | 1.160902e-50 | -8.615850e-47 |
| Msa0197030 | Msa0316610 | 0.935200 | 1.232878e-96 | -8.615850e-47 |
| Msa0197030 | Msa0344680 | 0.911725 | 4.390342e-83 | -8.615850e-47 |
| Msa0197030 | Msa0346790 | 0.869372 | 3.253709e-66 | -8.615850e-47 |
| Msa0197030 | Msa0354390 | 0.817246 | 3.642916e-52 | -8.615850e-47 |
| Msa0197030 | Msa0364780 | 0.804942 | 1.695551e-49 | -8.615850e-47 |
| Msa0197030 | Msa0379100 | 0.801848 | 7.417224e-49 | -8.615850e-47 |
| Msa0197030 | Msa0382590 | 0.855774 | 5.032973e-62 | -8.615850e-47 |
| Msa0197030 | Msa0384530 | 0.802404 | 5.700695e-49 | -8.615850e-47 |
| Msa0197030 | Msa0387970 | 0.874454 | 6.669802e-68 | -8.615850e-47 |
| Msa0197030 | Msa0392050 | 0.911889 | 3.646801e-83 | -8.615850e-47 |
| Msa0197030 | Msa0392540 | 0.889070 | 3.364808e-73 | -8.615850e-47 |
| Msa0197030 | Msa0401340 | 0.826117 | 3.234221e-54 | -8.615850e-47 |
| Msa0197030 | Msa0404060 | 0.823181 | 1.590694e-53 | -8.615850e-47 |
| Msa0197030 | Msa0404070 | 0.833122 | 6.391387e-56 | -8.615850e-47 |
| Msa0197030 | Msa0412190 | 0.847489 | 1.119504e-59 | -8.615850e-47 |
| Msa0197030 | Msa0425320 | 0.804274 | 2.336951e-49 | -8.615850e-47 |
| Msa0197030 | Msa0428730 | 0.802880 | 4.547374e-49 | -8.615850e-47 |
| Msa0197030 | Msa0432720 | 0.859988 | 2.825504e-63 | -8.615850e-47 |
| Msa0197030 | Msa0437550 | 0.841183 | 5.546365e-58 | -8.615850e-47 |
| Msa0197030 | Msa0440310 | 0.886316 | 3.803778e-72 | -8.615850e-47 |
| Msa0197030 | Msa0448120 | 0.819806 | 9.572312e-53 | -8.615850e-47 |
| Msa0197030 | Msa0456760 | 0.822158 | 2.750522e-53 | -8.615850e-47 |
| Msa0197030 | Msa0469950 | 0.912966 | 1.061967e-83 | -8.615850e-47 |
| Msa0197030 | Msa0471760 | 0.805152 | 1.532444e-49 | -8.615850e-47 |
| Msa0197030 | Msa0476960 | -0.808776 | 2.622748e-50 | -8.615850e-47 |
| Msa0197030 | Msa0481490 | 0.835461 | 1.655726e-56 | -8.615850e-47 |
| Msa0197030 | Msa0487490 | 0.869474 | 3.013529e-66 | -8.615850e-47 |
| Msa0197030 | Msa0504090 | 0.805534 | 1.274410e-49 | -8.615850e-47 |
| Msa0197030 | Msa0515460 | 0.804249 | 2.364672e-49 | -8.615850e-47 |
| Msa0197030 | Msa0525270 | 0.885797 | 5.965395e-72 | -8.615850e-47 |
| Msa0197030 | Msa0525280 | 0.899342 | 2.179231e-77 | -8.615850e-47 |
| Msa0197030 | Msa0530340 | 0.878773 | 2.141427e-69 | -8.615850e-47 |
| Msa0197030 | Msa0545230 | 0.824913 | 6.239466e-54 | -8.615850e-47 |
| Msa0197030 | Msa0546080 | 0.832986 | 6.910006e-56 | -8.615850e-47 |
| Msa0197030 | Msa0548210 | 0.876392 | 1.448104e-68 | -8.615850e-47 |
| Msa0197030 | Msa0549540 | 0.913152 | 8.564216e-84 | -8.615850e-47 |
| Msa0197030 | Msa0549760 | 0.820162 | 7.934785e-53 | -8.615850e-47 |
| Msa0197030 | Msa0556070 | 0.848340 | 6.522174e-60 | -8.615850e-47 |
| Msa0197030 | Msa0570680 | 0.831540 | 1.575169e-55 | -8.615850e-47 |
| Msa0197030 | Msa0577050 | 0.820411 | 6.959097e-53 | -8.615850e-47 |
| Msa0197030 | Msa0584280 | 0.807060 | 6.078227e-50 | -8.615850e-47 |
| Msa0197030 | Msa0604880 | 0.888411 | 6.045287e-73 | -8.615850e-47 |
| Msa0197030 | Msa0605250 | 0.873916 | 1.014247e-67 | -8.615850e-47 |
| Msa0197030 | Msa0609790 | 0.849426 | 3.257630e-60 | -8.615850e-47 |
| Msa0197030 | Msa0610780 | 0.819488 | 1.131254e-52 | -8.615850e-47 |
| Msa0197030 | Msa0610810 | 0.830669 | 2.577960e-55 | -8.615850e-47 |
| Msa0197030 | Msa0622250 | 0.860208 | 2.423893e-63 | -8.615850e-47 |
| Msa0197030 | Msa0624040 | 0.801167 | 1.022952e-48 | -8.615850e-47 |
| Msa0197030 | Msa0627050 | 0.898586 | 4.587989e-77 | -8.615850e-47 |
| Msa0197030 | Msa0636720 | 0.846557 | 2.015279e-59 | -8.615850e-47 |
| Msa0197030 | Msa0644630 | 0.851961 | 6.307188e-61 | -8.615850e-47 |
| Msa0197030 | Msa0646190 | 0.914733 | 1.354951e-84 | -8.615850e-47 |
| Msa0197030 | Msa0646340 | 0.845167 | 4.807885e-59 | -8.615850e-47 |
| Msa0197030 | Msa0649310 | 0.813668 | 2.278303e-51 | -8.615850e-47 |
| Msa0197030 | Msa0651310 | 0.848720 | 5.120477e-60 | -8.615850e-47 |
| Msa0197030 | Msa0659300 | -0.814951 | 1.185927e-51 | -8.615850e-47 |
| Msa0197030 | Msa0675010 | 0.834738 | 2.519152e-56 | -8.615850e-47 |
| Msa0197030 | Msa0681210 | 0.833203 | 6.103616e-56 | -8.615850e-47 |
| Msa0197030 | Msa0685890 | 0.859949 | 2.902333e-63 | -8.615850e-47 |
| Msa0197030 | Msa0693400 | 0.832095 | 1.149127e-55 | -8.615850e-47 |
| Msa0197030 | Msa0693500 | 0.833775 | 4.392521e-56 | -8.615850e-47 |
| Msa0197030 | Msa0705810 | 0.811796 | 5.852357e-51 | -8.615850e-47 |
| Msa0197030 | Msa0740210 | 0.851714 | 7.412148e-61 | -8.615850e-47 |
| Msa0197030 | Msa0742090 | 0.821107 | 4.812820e-53 | -8.615850e-47 |
| Msa0197030 | Msa0742160 | 0.815208 | 1.040109e-51 | -8.615850e-47 |
| Msa0197030 | Msa0748330 | 0.852161 | 5.535581e-61 | -8.615850e-47 |
| Msa0197030 | Msa0749150 | 0.820764 | 5.773573e-53 | -8.615850e-47 |
| Msa0197030 | Msa0781390 | 0.860250 | 2.354180e-63 | -8.615850e-47 |
| Msa0197030 | Msa0786100 | 0.808620 | 2.832255e-50 | -8.615850e-47 |
| Msa0197030 | Msa0790640 | 0.831580 | 1.539811e-55 | -8.615850e-47 |
| Msa0197030 | Msa0792880 | 0.809164 | 2.166448e-50 | -8.615850e-47 |
| Msa0197030 | Msa0793100 | 0.833756 | 4.441148e-56 | -8.615850e-47 |
| Msa0197030 | Msa0806720 | 0.849307 | 3.516517e-60 | -8.615850e-47 |
| Msa0197030 | Msa0806760 | 0.855071 | 8.069048e-62 | -8.615850e-47 |
| Msa0197030 | Msa0820520 | 0.828074 | 1.100471e-54 | -8.615850e-47 |
| Msa0197030 | Msa0823420 | 0.806391 | 8.414573e-50 | -8.615850e-47 |
| Msa0197030 | Msa0828900 | 0.808592 | 2.871457e-50 | -8.615850e-47 |
| Msa0197030 | Msa0860920 | 0.848935 | 4.464039e-60 | -8.615850e-47 |
| Msa0197030 | Msa0862290 | 0.814542 | 1.461279e-51 | -8.615850e-47 |
| Msa0197030 | Msa0879650 | 0.838203 | 3.305354e-57 | -8.615850e-47 |
| Msa0197030 | Msa0882700 | 0.817947 | 2.531311e-52 | -8.615850e-47 |
| Msa0197030 | Msa0944690 | 0.854676 | 1.050587e-61 | -8.615850e-47 |
| Msa0197030 | Msa0945960 | 0.838715 | 2.439586e-57 | -8.615850e-47 |
| Msa0197030 | Msa0968780 | 0.816329 | 5.849493e-52 | -8.615850e-47 |
| Msa0197030 | Msa0984000 | 0.893327 | 6.971316e-75 | -8.615850e-47 |
| Msa0197030 | Msa1031150 | 0.808528 | 2.963797e-50 | -8.615850e-47 |
| Msa0197030 | Msa1034930 | 0.831551 | 1.566051e-55 | -8.615850e-47 |
| Msa0197030 | Msa1069960 | 0.813496 | 2.485920e-51 | -8.615850e-47 |
| Msa0197030 | Msa1082150 | 0.862648 | 4.368525e-64 | -8.615850e-47 |
| Msa0197030 | Msa1119570 | 0.830054 | 3.645371e-55 | -8.615850e-47 |
| Msa0197030 | Msa1119860 | 0.808983 | 2.368676e-50 | -8.615850e-47 |
| Msa0197030 | Msa1137940 | 0.831542 | 1.573925e-55 | -8.615850e-47 |
| Msa0197030 | Msa1144730 | 0.911731 | 4.364337e-83 | -8.615850e-47 |
| Msa0197030 | Msa1158090 | 0.823154 | 1.613560e-53 | -8.615850e-47 |
| Msa0197030 | Msa1173380 | 0.885938 | 5.279882e-72 | -8.615850e-47 |
| Msa0197030 | Msa1180050 | 0.815621 | 8.416599e-52 | -8.615850e-47 |
| Msa0197030 | Msa1182800 | 0.825672 | 4.125317e-54 | -8.615850e-47 |
| Msa0197030 | Msa1184010 | 0.823244 | 1.537861e-53 | -8.615850e-47 |
| Msa0197030 | Msa1228350 | 0.806962 | 6.375101e-50 | -8.615850e-47 |
| Msa0197030 | Msa1232270 | 0.804309 | 2.298540e-49 | -8.615850e-47 |
| Msa0197030 | Msa1236860 | 0.801523 | 8.650332e-49 | -8.615850e-47 |
| Msa0197030 | Msa1239900 | 0.817491 | 3.208874e-52 | -8.615850e-47 |
| Msa0197030 | Msa1252300 | 0.804537 | 2.059903e-49 | -8.615850e-47 |
| Msa0197030 | Msa1255020 | 0.840498 | 8.387561e-58 | -8.615850e-47 |
| Msa0197030 | Msa1270770 | 0.814320 | 1.635921e-51 | -8.615850e-47 |
| Msa0197030 | Msa1281270 | 0.833788 | 4.360314e-56 | -8.615850e-47 |
| Msa0197030 | Msa1292960 | 0.802718 | 4.912490e-49 | -8.615850e-47 |
| Msa0197030 | Msa1293050 | 0.816088 | 6.623269e-52 | -8.615850e-47 |
| Msa0197030 | Msa1295470 | 0.837442 | 5.184297e-57 | -8.615850e-47 |
| Msa0197030 | Msa1320380 | 0.842701 | 2.201407e-58 | -8.615850e-47 |
| Msa0197030 | Msa1338590 | 0.800185 | 1.623010e-48 | -8.615850e-47 |
| Msa0197030 | Msa1349810 | 0.856889 | 2.370328e-62 | -8.615850e-47 |
| Msa0197030 | Msa1354090 | 0.850337 | 1.812399e-60 | -8.615850e-47 |
| Msa0197030 | Msa1358340 | 0.861261 | 1.161848e-63 | -8.615850e-47 |
| Msa0197030 | Msa1359890 | 0.912419 | 1.990087e-83 | -8.615850e-47 |
| Msa0197030 | Msa1369180 | 0.802121 | 6.519655e-49 | -8.615850e-47 |
| Msa0197030 | Msa1394900 | 0.833732 | 4.503050e-56 | -8.615850e-47 |
| Msa0197030 | Msa1404690 | 0.810921 | 9.061105e-51 | -8.615850e-47 |
| Msa0197030 | Msa1405380 | 0.805429 | 1.340679e-49 | -8.615850e-47 |
| Msa0197030 | Msa1406020 | 0.875066 | 4.128101e-68 | -8.615850e-47 |
| Msa0197030 | Msa1412500 | -0.802869 | 4.571431e-49 | -8.615850e-47 |
| Msa0197030 | Msa1434660 | 0.867600 | 1.214044e-65 | -8.615850e-47 |
| Msa0197030 | Msa1459540 | 0.843596 | 1.271632e-58 | -8.615850e-47 |
| Msa0197030 | Msa1466350 | 0.817915 | 2.574124e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197030 | MtrunA17_Chr2g0289141 | 96.532 | 173 | 6 | 0 | 1 | 173 | 1 | 173 | 1.10e-126 | 353 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197030 | AT4G04330.1 | 70.270 | 148 | 41 | 2 | 25 | 172 | 27 | 171 | 2.90e-72 | 215 |
Find 47 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATTTGTCCAACCACTTA+TGG | 0.272786 | 2_1:-14656222 | None:intergenic |
| CTCTTGCCAGCTGGCCAAAA+AGG | 0.282297 | 2_1:-14654973 | None:intergenic |
| ATATTGATATGTATGGAAAT+TGG | 0.302745 | 2_1:+14656110 | Msa0197030:three_prime_UTR |
| TGTCCCATTCAAAATCCTTT+TGG | 0.366494 | 2_1:-14655817 | None:intergenic |
| TGAAGCATATGTTGAGCTAA+TGG | 0.380963 | 2_1:+14655447 | Msa0197030:CDS |
| TTGTTGGTGCATGGTGTAGC+AGG | 0.403399 | 2_1:-14654943 | None:intergenic |
| ACTCTAACACGAGGCTTATG+AGG | 0.410584 | 2_1:+14655985 | Msa0197030:CDS |
| ATTAGCTCAACATATGCTTC+AGG | 0.434378 | 2_1:-14655445 | None:intergenic |
| AAATCGAGTTAGACCATAAG+TGG | 0.434411 | 2_1:+14656209 | Msa0197030:three_prime_UTR |
| GTGCAACATATTGATATGTA+TGG | 0.445645 | 2_1:+14656103 | Msa0197030:three_prime_UTR |
| GAGCTCCTTCTCTTGCCAGC+TGG | 0.451237 | 2_1:-14654982 | None:intergenic |
| TTGAATAGCCCTACGCATAA+TGG | 0.455624 | 2_1:+14655688 | Msa0197030:intron |
| CTTCTCAGTTTCAGAACGAC+TGG | 0.465661 | 2_1:-14656024 | None:intergenic |
| GAAAGGGCTTGCTTTGCTGC+AGG | 0.490075 | 2_1:-14656055 | None:intergenic |
| TTCGATCAATGGGAATGAAA+GGG | 0.495924 | 2_1:-14656071 | None:intergenic |
| GTTCGATCAATGGGAATGAA+AGG | 0.498668 | 2_1:-14656072 | None:intergenic |
| TGTTGAGCTAATGGAATTTG+TGG | 0.500110 | 2_1:+14655456 | Msa0197030:CDS |
| TACATAGCTCAGTGTTTGCA+TGG | 0.509009 | 2_1:+14656173 | Msa0197030:three_prime_UTR |
| TACATATCAATATGTTGCAC+AGG | 0.515031 | 2_1:-14656100 | None:intergenic |
| ACTTGTCACCATCATCTAAC+GGG | 0.516413 | 2_1:-14655486 | None:intergenic |
| CATTTACCTCCATTATGCGT+AGG | 0.520633 | 2_1:-14655697 | None:intergenic |
| TCATCAAGACATAAGAACTT+AGG | 0.525555 | 2_1:+14655532 | Msa0197030:CDS |
| GGTGTAGCAGGGTAAACATA+AGG | 0.525917 | 2_1:-14654931 | None:intergenic |
| ATTTACCTCCATTATGCGTA+GGG | 0.537053 | 2_1:-14655696 | None:intergenic |
| ATGTATGGAAATTGGAAAGA+TGG | 0.540841 | 2_1:+14656118 | Msa0197030:three_prime_UTR |
| TTTGGCCAGCTGGCAAGAGA+AGG | 0.542150 | 2_1:+14654977 | Msa0197030:CDS |
| AATCGTTGCTGCTCAACTTG+AGG | 0.547786 | 2_1:+14655223 | Msa0197030:CDS |
| GAGATCAGCATACTGCCAAA+AGG | 0.559923 | 2_1:+14655802 | Msa0197030:CDS |
| AGAAGCAACACCGGAAGCAA+AGG | 0.569743 | 2_1:+14655157 | Msa0197030:CDS |
| AACTTGTCACCATCATCTAA+CGG | 0.580454 | 2_1:-14655487 | None:intergenic |
| TTCTGAAACTGAGAAGTGAA+TGG | 0.580741 | 2_1:+14656031 | Msa0197030:exon |
| CAGTGTAGGTGAAGAAATTG+TGG | 0.581309 | 2_1:-14655193 | None:intergenic |
| TAGAGCTGAAGATGATTCCA+TGG | 0.584821 | 2_1:-14654893 | None:intergenic |
| TGCAACAAAATGTTTGTACC+TGG | 0.588133 | 2_1:+14655027 | Msa0197030:CDS |
| CGAGTTAGACCATAAGTGGT+TGG | 0.590124 | 2_1:+14656213 | Msa0197030:three_prime_UTR |
| CTCTAACACGAGGCTTATGA+GGG | 0.595924 | 2_1:+14655986 | Msa0197030:CDS |
| TGTTGGTGCATGGTGTAGCA+GGG | 0.612247 | 2_1:-14654942 | None:intergenic |
| AGGATTCGGAGAAGCAACAC+CGG | 0.623746 | 2_1:+14655148 | Msa0197030:intron |
| TGGCAGAAGACTCACTCGCA+TGG | 0.631217 | 2_1:+14656138 | Msa0197030:three_prime_UTR |
| GCTTATGAGGGATTACGTCT+CGG | 0.635882 | 2_1:+14655998 | Msa0197030:CDS |
| GATAAACACCCGTTAGATGA+TGG | 0.636151 | 2_1:+14655478 | Msa0197030:CDS |
| TGATGATTCTCTGAACATAG+TGG | 0.639406 | 2_1:-14655515 | None:intergenic |
| TGTAGGTGAAGAAATTGTGG+AGG | 0.663333 | 2_1:-14655190 | None:intergenic |
| AATAGCCCTACGCATAATGG+AGG | 0.664082 | 2_1:+14655691 | Msa0197030:intron |
| TTTGTTGCATTGCAACCGTG+TGG | 0.685225 | 2_1:-14655013 | None:intergenic |
| GGAGCTCTCAATTATCCACA+CGG | 0.710162 | 2_1:+14654998 | Msa0197030:CDS |
| TGGTCACTGACTCTAACACG+AGG | 0.758847 | 2_1:+14655976 | Msa0197030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTATTTAATTCAAGTTAT+TGG | + | chr2_1:14655340-14655359 | Msa0197030:intron | 15.0% |
| !! | TATGGTGTAATATTATATAT+AGG | + | chr2_1:14655778-14655797 | Msa0197030:intron | 15.0% |
| !!! | TGTTATTTAATTCAAGTTAT+TGG | + | chr2_1:14655340-14655359 | Msa0197030:intron | 15.0% |
| !! | TATGGTGTAATATTATATAT+AGG | + | chr2_1:14655778-14655797 | Msa0197030:intron | 15.0% |
| !! | AAAACAAACTAAAACAACAA+AGG | - | chr2_1:14655268-14655287 | None:intergenic | 20.0% |
| !! | TTGAATTAAATAACACAACT+AGG | - | chr2_1:14655335-14655354 | None:intergenic | 20.0% |
| !! | TAATAGACACTTAACTATTA+AGG | - | chr2_1:14655584-14655603 | None:intergenic | 20.0% |
| !! | ATATTGATATGTATGGAAAT+TGG | + | chr2_1:14656110-14656129 | Msa0197030:three_prime_UTR | 20.0% |
| !! | AAAACAAACTAAAACAACAA+AGG | - | chr2_1:14655268-14655287 | None:intergenic | 20.0% |
| !! | TTGAATTAAATAACACAACT+AGG | - | chr2_1:14655335-14655354 | None:intergenic | 20.0% |
| !! | TAATAGACACTTAACTATTA+AGG | - | chr2_1:14655584-14655603 | None:intergenic | 20.0% |
| !! | ATATTGATATGTATGGAAAT+TGG | + | chr2_1:14656110-14656129 | Msa0197030:three_prime_UTR | 20.0% |
| !! | TTACAACTTCAATTTTGTAC+TGG | + | chr2_1:14655055-14655074 | Msa0197030:intron | 25.0% |
| ! | AAAACAACAAAGGCAAATAA+AGG | - | chr2_1:14655258-14655277 | None:intergenic | 25.0% |
| ! | TTAAATAACACAACTAGGTT+GGG | - | chr2_1:14655330-14655349 | None:intergenic | 25.0% |
| ! | ATTAAATAACACAACTAGGT+TGG | - | chr2_1:14655331-14655350 | None:intergenic | 25.0% |
| ! | ACACTTAACTATTAAGGATT+GGG | - | chr2_1:14655578-14655597 | None:intergenic | 25.0% |
| ! | TAACCAACAACTATTCTATA+TGG | + | chr2_1:14655606-14655625 | Msa0197030:intron | 25.0% |
| !! | AAAACTTGCTTAATAAGTGA+TGG | - | chr2_1:14655746-14655765 | None:intergenic | 25.0% |
| !!! | AGTTTTGATTGAGTATACTA+TGG | + | chr2_1:14655760-14655779 | Msa0197030:intron | 25.0% |
| ! | GGAAGTTGAATAAATTTAGT+AGG | - | chr2_1:14655913-14655932 | None:intergenic | 25.0% |
| ! | AACAGTTACATGCATTATTA+AGG | - | chr2_1:14655934-14655953 | None:intergenic | 25.0% |
| !! | TTACAACTTCAATTTTGTAC+TGG | + | chr2_1:14655055-14655074 | Msa0197030:intron | 25.0% |
| ! | AAAACAACAAAGGCAAATAA+AGG | - | chr2_1:14655258-14655277 | None:intergenic | 25.0% |
| ! | TTAAATAACACAACTAGGTT+GGG | - | chr2_1:14655330-14655349 | None:intergenic | 25.0% |
| ! | ATTAAATAACACAACTAGGT+TGG | - | chr2_1:14655331-14655350 | None:intergenic | 25.0% |
| ! | ACACTTAACTATTAAGGATT+GGG | - | chr2_1:14655578-14655597 | None:intergenic | 25.0% |
| ! | TAACCAACAACTATTCTATA+TGG | + | chr2_1:14655606-14655625 | Msa0197030:intron | 25.0% |
| !! | AAAACTTGCTTAATAAGTGA+TGG | - | chr2_1:14655746-14655765 | None:intergenic | 25.0% |
| !!! | AGTTTTGATTGAGTATACTA+TGG | + | chr2_1:14655760-14655779 | Msa0197030:intron | 25.0% |
| ! | GGAAGTTGAATAAATTTAGT+AGG | - | chr2_1:14655913-14655932 | None:intergenic | 25.0% |
| ! | AACAGTTACATGCATTATTA+AGG | - | chr2_1:14655934-14655953 | None:intergenic | 25.0% |
| !! | AACTTCAATTTTGTACTGGT+TGG | + | chr2_1:14655059-14655078 | Msa0197030:intron | 30.0% |
| AATAGTGTGCTATGTTATCT+TGG | + | chr2_1:14655121-14655140 | Msa0197030:intron | 30.0% | |
| TCATCAAGACATAAGAACTT+AGG | + | chr2_1:14655532-14655551 | Msa0197030:CDS | 30.0% | |
| AAGACATAAGAACTTAGGTA+AGG | + | chr2_1:14655537-14655556 | Msa0197030:intron | 30.0% | |
| GACACTTAACTATTAAGGAT+TGG | - | chr2_1:14655579-14655598 | None:intergenic | 30.0% | |
| TCACCATATAGAATAGTTGT+TGG | - | chr2_1:14655612-14655631 | None:intergenic | 30.0% | |
| TACATATCAATATGTTGCAC+AGG | - | chr2_1:14656103-14656122 | None:intergenic | 30.0% | |
| GTGCAACATATTGATATGTA+TGG | + | chr2_1:14656103-14656122 | Msa0197030:three_prime_UTR | 30.0% | |
| ATGTATGGAAATTGGAAAGA+TGG | + | chr2_1:14656118-14656137 | Msa0197030:three_prime_UTR | 30.0% | |
| !! | AACTTCAATTTTGTACTGGT+TGG | + | chr2_1:14655059-14655078 | Msa0197030:intron | 30.0% |
| AATAGTGTGCTATGTTATCT+TGG | + | chr2_1:14655121-14655140 | Msa0197030:intron | 30.0% | |
| TCATCAAGACATAAGAACTT+AGG | + | chr2_1:14655532-14655551 | Msa0197030:CDS | 30.0% | |
| AAGACATAAGAACTTAGGTA+AGG | + | chr2_1:14655537-14655556 | Msa0197030:intron | 30.0% | |
| GACACTTAACTATTAAGGAT+TGG | - | chr2_1:14655579-14655598 | None:intergenic | 30.0% | |
| TCACCATATAGAATAGTTGT+TGG | - | chr2_1:14655612-14655631 | None:intergenic | 30.0% | |
| TACATATCAATATGTTGCAC+AGG | - | chr2_1:14656103-14656122 | None:intergenic | 30.0% | |
| GTGCAACATATTGATATGTA+TGG | + | chr2_1:14656103-14656122 | Msa0197030:three_prime_UTR | 30.0% | |
| ATGTATGGAAATTGGAAAGA+TGG | + | chr2_1:14656118-14656137 | Msa0197030:three_prime_UTR | 30.0% | |
| ! | CCAAAAAGGATAGCTTTTGT+TGG | - | chr2_1:14654962-14654981 | None:intergenic | 35.0% |
| ! | CCAACAAAAGCTATCCTTTT+TGG | + | chr2_1:14654959-14654978 | Msa0197030:CDS | 35.0% |
| TGCAACAAAATGTTTGTACC+TGG | + | chr2_1:14655027-14655046 | Msa0197030:CDS | 35.0% | |
| ACAAAATGTTTGTACCTGGT+CGG | + | chr2_1:14655031-14655050 | Msa0197030:intron | 35.0% | |
| ! | GAAGAAATTGTGGAGGTTTT+TGG | - | chr2_1:14655186-14655205 | None:intergenic | 35.0% |
| !!! | AACGATTTTAACTGCAGTGT+AGG | - | chr2_1:14655210-14655229 | None:intergenic | 35.0% |
| CAACAAAGGCAAATAAAGGA+GGG | - | chr2_1:14655254-14655273 | None:intergenic | 35.0% | |
| ACAACAAAGGCAAATAAAGG+AGG | - | chr2_1:14655255-14655274 | None:intergenic | 35.0% | |
| ATTAGCTCAACATATGCTTC+AGG | - | chr2_1:14655448-14655467 | None:intergenic | 35.0% | |
| TGAAGCATATGTTGAGCTAA+TGG | + | chr2_1:14655447-14655466 | Msa0197030:CDS | 35.0% | |
| TGTTGAGCTAATGGAATTTG+TGG | + | chr2_1:14655456-14655475 | Msa0197030:CDS | 35.0% | |
| AACTTGTCACCATCATCTAA+CGG | - | chr2_1:14655490-14655509 | None:intergenic | 35.0% | |
| TGATGATTCTCTGAACATAG+TGG | - | chr2_1:14655518-14655537 | None:intergenic | 35.0% | |
| AAATCCTGTAAACTGATGTG+TGG | + | chr2_1:14655648-14655667 | Msa0197030:intron | 35.0% | |
| ATTTACCTCCATTATGCGTA+GGG | - | chr2_1:14655699-14655718 | None:intergenic | 35.0% | |
| ! | ACTGCCAAAAGGATTTTGAA+TGG | + | chr2_1:14655813-14655832 | Msa0197030:CDS | 35.0% |
| ! | CTGCCAAAAGGATTTTGAAT+GGG | + | chr2_1:14655814-14655833 | Msa0197030:CDS | 35.0% |
| ! | TGTCCCATTCAAAATCCTTT+TGG | - | chr2_1:14655820-14655839 | None:intergenic | 35.0% |
| !!! | CTTGAAGCGTTTAGCTTTTA+AGG | + | chr2_1:14655841-14655860 | Msa0197030:CDS | 35.0% |
| !! | TTCTGAAACTGAGAAGTGAA+TGG | + | chr2_1:14656031-14656050 | Msa0197030:exon | 35.0% |
| TTCGATCAATGGGAATGAAA+GGG | - | chr2_1:14656074-14656093 | None:intergenic | 35.0% | |
| AAATCGAGTTAGACCATAAG+TGG | + | chr2_1:14656209-14656228 | Msa0197030:three_prime_UTR | 35.0% | |
| ! | CCAAAAAGGATAGCTTTTGT+TGG | - | chr2_1:14654962-14654981 | None:intergenic | 35.0% |
| ! | CCAACAAAAGCTATCCTTTT+TGG | + | chr2_1:14654959-14654978 | Msa0197030:CDS | 35.0% |
| TGCAACAAAATGTTTGTACC+TGG | + | chr2_1:14655027-14655046 | Msa0197030:CDS | 35.0% | |
| ACAAAATGTTTGTACCTGGT+CGG | + | chr2_1:14655031-14655050 | Msa0197030:intron | 35.0% | |
| ! | GAAGAAATTGTGGAGGTTTT+TGG | - | chr2_1:14655186-14655205 | None:intergenic | 35.0% |
| !!! | AACGATTTTAACTGCAGTGT+AGG | - | chr2_1:14655210-14655229 | None:intergenic | 35.0% |
| CAACAAAGGCAAATAAAGGA+GGG | - | chr2_1:14655254-14655273 | None:intergenic | 35.0% | |
| ACAACAAAGGCAAATAAAGG+AGG | - | chr2_1:14655255-14655274 | None:intergenic | 35.0% | |
| ATTAGCTCAACATATGCTTC+AGG | - | chr2_1:14655448-14655467 | None:intergenic | 35.0% | |
| TGAAGCATATGTTGAGCTAA+TGG | + | chr2_1:14655447-14655466 | Msa0197030:CDS | 35.0% | |
| TGTTGAGCTAATGGAATTTG+TGG | + | chr2_1:14655456-14655475 | Msa0197030:CDS | 35.0% | |
| AACTTGTCACCATCATCTAA+CGG | - | chr2_1:14655490-14655509 | None:intergenic | 35.0% | |
| TGATGATTCTCTGAACATAG+TGG | - | chr2_1:14655518-14655537 | None:intergenic | 35.0% | |
| AAATCCTGTAAACTGATGTG+TGG | + | chr2_1:14655648-14655667 | Msa0197030:intron | 35.0% | |
| ATTTACCTCCATTATGCGTA+GGG | - | chr2_1:14655699-14655718 | None:intergenic | 35.0% | |
| ! | ACTGCCAAAAGGATTTTGAA+TGG | + | chr2_1:14655813-14655832 | Msa0197030:CDS | 35.0% |
| ! | CTGCCAAAAGGATTTTGAAT+GGG | + | chr2_1:14655814-14655833 | Msa0197030:CDS | 35.0% |
| ! | TGTCCCATTCAAAATCCTTT+TGG | - | chr2_1:14655820-14655839 | None:intergenic | 35.0% |
| !!! | CTTGAAGCGTTTAGCTTTTA+AGG | + | chr2_1:14655841-14655860 | Msa0197030:CDS | 35.0% |
| !! | TTCTGAAACTGAGAAGTGAA+TGG | + | chr2_1:14656031-14656050 | Msa0197030:exon | 35.0% |
| TTCGATCAATGGGAATGAAA+GGG | - | chr2_1:14656074-14656093 | None:intergenic | 35.0% | |
| AAATCGAGTTAGACCATAAG+TGG | + | chr2_1:14656209-14656228 | Msa0197030:three_prime_UTR | 35.0% | |
| ATTGAAGTTGTAAACCGACC+AGG | - | chr2_1:14655048-14655067 | None:intergenic | 40.0% | |
| TGCTATGTTATCTTGGATGC+AGG | + | chr2_1:14655128-14655147 | Msa0197030:intron | 40.0% | |
| GTTATCTTGGATGCAGGATT+CGG | + | chr2_1:14655134-14655153 | Msa0197030:intron | 40.0% | |
| TGTAGGTGAAGAAATTGTGG+AGG | - | chr2_1:14655193-14655212 | None:intergenic | 40.0% | |
| CAGTGTAGGTGAAGAAATTG+TGG | - | chr2_1:14655196-14655215 | None:intergenic | 40.0% | |
| CAGGATTATAACTCTGCTCA+TGG | - | chr2_1:14655429-14655448 | None:intergenic | 40.0% | |
| GATAAACACCCGTTAGATGA+TGG | + | chr2_1:14655478-14655497 | Msa0197030:CDS | 40.0% | |
| ACTTGTCACCATCATCTAAC+GGG | - | chr2_1:14655489-14655508 | None:intergenic | 40.0% | |
| TTGAATAGCCCTACGCATAA+TGG | + | chr2_1:14655688-14655707 | Msa0197030:intron | 40.0% | |
| CATTTACCTCCATTATGCGT+AGG | - | chr2_1:14655700-14655719 | None:intergenic | 40.0% | |
| ! | CTACGCATAATGGAGGTAAA+TGG | + | chr2_1:14655698-14655717 | Msa0197030:intron | 40.0% |
| GAGGTAAATGGATGACTAGT+TGG | + | chr2_1:14655710-14655729 | Msa0197030:intron | 40.0% | |
| GTTCGATCAATGGGAATGAA+AGG | - | chr2_1:14656075-14656094 | None:intergenic | 40.0% | |
| ! | CAGGCTTTTGTTCGATCAAT+GGG | - | chr2_1:14656084-14656103 | None:intergenic | 40.0% |
| ! | ACAGGCTTTTGTTCGATCAA+TGG | - | chr2_1:14656085-14656104 | None:intergenic | 40.0% |
| TACATAGCTCAGTGTTTGCA+TGG | + | chr2_1:14656173-14656192 | Msa0197030:three_prime_UTR | 40.0% | |
| ATTGAAGTTGTAAACCGACC+AGG | - | chr2_1:14655048-14655067 | None:intergenic | 40.0% | |
| TGCTATGTTATCTTGGATGC+AGG | + | chr2_1:14655128-14655147 | Msa0197030:intron | 40.0% | |
| GTTATCTTGGATGCAGGATT+CGG | + | chr2_1:14655134-14655153 | Msa0197030:intron | 40.0% | |
| TGTAGGTGAAGAAATTGTGG+AGG | - | chr2_1:14655193-14655212 | None:intergenic | 40.0% | |
| CAGTGTAGGTGAAGAAATTG+TGG | - | chr2_1:14655196-14655215 | None:intergenic | 40.0% | |
| CAGGATTATAACTCTGCTCA+TGG | - | chr2_1:14655429-14655448 | None:intergenic | 40.0% | |
| GATAAACACCCGTTAGATGA+TGG | + | chr2_1:14655478-14655497 | Msa0197030:CDS | 40.0% | |
| ACTTGTCACCATCATCTAAC+GGG | - | chr2_1:14655489-14655508 | None:intergenic | 40.0% | |
| TTGAATAGCCCTACGCATAA+TGG | + | chr2_1:14655688-14655707 | Msa0197030:intron | 40.0% | |
| CATTTACCTCCATTATGCGT+AGG | - | chr2_1:14655700-14655719 | None:intergenic | 40.0% | |
| ! | CTACGCATAATGGAGGTAAA+TGG | + | chr2_1:14655698-14655717 | Msa0197030:intron | 40.0% |
| GAGGTAAATGGATGACTAGT+TGG | + | chr2_1:14655710-14655729 | Msa0197030:intron | 40.0% | |
| GTTCGATCAATGGGAATGAA+AGG | - | chr2_1:14656075-14656094 | None:intergenic | 40.0% | |
| ! | CAGGCTTTTGTTCGATCAAT+GGG | - | chr2_1:14656084-14656103 | None:intergenic | 40.0% |
| ! | ACAGGCTTTTGTTCGATCAA+TGG | - | chr2_1:14656085-14656104 | None:intergenic | 40.0% |
| TACATAGCTCAGTGTTTGCA+TGG | + | chr2_1:14656173-14656192 | Msa0197030:three_prime_UTR | 40.0% | |
| GGTGTAGCAGGGTAAACATA+AGG | - | chr2_1:14654934-14654953 | None:intergenic | 45.0% | |
| ! | GGATAGCTTTTGTTGGTGCA+TGG | - | chr2_1:14654955-14654974 | None:intergenic | 45.0% |
| GGAGCTCTCAATTATCCACA+CGG | + | chr2_1:14654998-14655017 | Msa0197030:CDS | 45.0% | |
| TTTGTTGCATTGCAACCGTG+TGG | - | chr2_1:14655016-14655035 | None:intergenic | 45.0% | |
| !! | TTTTTGGCAGCCTTTGCTTC+CGG | - | chr2_1:14655170-14655189 | None:intergenic | 45.0% |
| AATCGTTGCTGCTCAACTTG+AGG | + | chr2_1:14655223-14655242 | Msa0197030:CDS | 45.0% | |
| AGAGCCACACATCAGTTTAC+AGG | - | chr2_1:14655655-14655674 | None:intergenic | 45.0% | |
| AATAGCCCTACGCATAATGG+AGG | + | chr2_1:14655691-14655710 | Msa0197030:intron | 45.0% | |
| GAGATCAGCATACTGCCAAA+AGG | + | chr2_1:14655802-14655821 | Msa0197030:CDS | 45.0% | |
| TAGCGTTGTCCTCTTGTAGA+TGG | + | chr2_1:14655956-14655975 | Msa0197030:intron | 45.0% | |
| AGTCAGTGACCATCTACAAG+AGG | - | chr2_1:14655968-14655987 | None:intergenic | 45.0% | |
| ACTCTAACACGAGGCTTATG+AGG | + | chr2_1:14655985-14656004 | Msa0197030:CDS | 45.0% | |
| CTCTAACACGAGGCTTATGA+GGG | + | chr2_1:14655986-14656005 | Msa0197030:CDS | 45.0% | |
| GCTTATGAGGGATTACGTCT+CGG | + | chr2_1:14655998-14656017 | Msa0197030:CDS | 45.0% | |
| CTTCTCAGTTTCAGAACGAC+TGG | - | chr2_1:14656027-14656046 | None:intergenic | 45.0% | |
| CGAGTTAGACCATAAGTGGT+TGG | + | chr2_1:14656213-14656232 | Msa0197030:three_prime_UTR | 45.0% | |
| GGTGTAGCAGGGTAAACATA+AGG | - | chr2_1:14654934-14654953 | None:intergenic | 45.0% | |
| ! | GGATAGCTTTTGTTGGTGCA+TGG | - | chr2_1:14654955-14654974 | None:intergenic | 45.0% |
| GGAGCTCTCAATTATCCACA+CGG | + | chr2_1:14654998-14655017 | Msa0197030:CDS | 45.0% | |
| TTTGTTGCATTGCAACCGTG+TGG | - | chr2_1:14655016-14655035 | None:intergenic | 45.0% | |
| !! | TTTTTGGCAGCCTTTGCTTC+CGG | - | chr2_1:14655170-14655189 | None:intergenic | 45.0% |
| AATCGTTGCTGCTCAACTTG+AGG | + | chr2_1:14655223-14655242 | Msa0197030:CDS | 45.0% | |
| AGAGCCACACATCAGTTTAC+AGG | - | chr2_1:14655655-14655674 | None:intergenic | 45.0% | |
| AATAGCCCTACGCATAATGG+AGG | + | chr2_1:14655691-14655710 | Msa0197030:intron | 45.0% | |
| GAGATCAGCATACTGCCAAA+AGG | + | chr2_1:14655802-14655821 | Msa0197030:CDS | 45.0% | |
| TAGCGTTGTCCTCTTGTAGA+TGG | + | chr2_1:14655956-14655975 | Msa0197030:intron | 45.0% | |
| AGTCAGTGACCATCTACAAG+AGG | - | chr2_1:14655968-14655987 | None:intergenic | 45.0% | |
| ACTCTAACACGAGGCTTATG+AGG | + | chr2_1:14655985-14656004 | Msa0197030:CDS | 45.0% | |
| CTCTAACACGAGGCTTATGA+GGG | + | chr2_1:14655986-14656005 | Msa0197030:CDS | 45.0% | |
| GCTTATGAGGGATTACGTCT+CGG | + | chr2_1:14655998-14656017 | Msa0197030:CDS | 45.0% | |
| CTTCTCAGTTTCAGAACGAC+TGG | - | chr2_1:14656027-14656046 | None:intergenic | 45.0% | |
| TGTTGGTGCATGGTGTAGCA+GGG | - | chr2_1:14654945-14654964 | None:intergenic | 50.0% | |
| TTGTTGGTGCATGGTGTAGC+AGG | - | chr2_1:14654946-14654965 | None:intergenic | 50.0% | |
| !! | AGCTATCCTTTTTGGCCAGC+TGG | + | chr2_1:14654967-14654986 | Msa0197030:CDS | 50.0% |
| AGGATTCGGAGAAGCAACAC+CGG | + | chr2_1:14655148-14655167 | Msa0197030:intron | 50.0% | |
| AGAAGCAACACCGGAAGCAA+AGG | + | chr2_1:14655157-14655176 | Msa0197030:CDS | 50.0% | |
| !! | ACTGATGTGTGGCTCTGACA+TGG | + | chr2_1:14655659-14655678 | Msa0197030:intron | 50.0% |
| !! | TGGTCACTGACTCTAACACG+AGG | + | chr2_1:14655976-14655995 | Msa0197030:CDS | 50.0% |
| TGTTGGTGCATGGTGTAGCA+GGG | - | chr2_1:14654945-14654964 | None:intergenic | 50.0% | |
| TTGTTGGTGCATGGTGTAGC+AGG | - | chr2_1:14654946-14654965 | None:intergenic | 50.0% | |
| !! | AGCTATCCTTTTTGGCCAGC+TGG | + | chr2_1:14654967-14654986 | Msa0197030:CDS | 50.0% |
| AGGATTCGGAGAAGCAACAC+CGG | + | chr2_1:14655148-14655167 | Msa0197030:intron | 50.0% | |
| AGAAGCAACACCGGAAGCAA+AGG | + | chr2_1:14655157-14655176 | Msa0197030:CDS | 50.0% | |
| !! | ACTGATGTGTGGCTCTGACA+TGG | + | chr2_1:14655659-14655678 | Msa0197030:intron | 50.0% |
| !! | TGGTCACTGACTCTAACACG+AGG | + | chr2_1:14655976-14655995 | Msa0197030:CDS | 50.0% |
| CTCTTGCCAGCTGGCCAAAA+AGG | - | chr2_1:14654976-14654995 | None:intergenic | 55.0% | |
| TTTGGCCAGCTGGCAAGAGA+AGG | + | chr2_1:14654977-14654996 | Msa0197030:CDS | 55.0% | |
| ! | GAAAGGGCTTGCTTTGCTGC+AGG | - | chr2_1:14656058-14656077 | None:intergenic | 55.0% |
| TGGCAGAAGACTCACTCGCA+TGG | + | chr2_1:14656138-14656157 | Msa0197030:three_prime_UTR | 55.0% | |
| CTCTTGCCAGCTGGCCAAAA+AGG | - | chr2_1:14654976-14654995 | None:intergenic | 55.0% | |
| TTTGGCCAGCTGGCAAGAGA+AGG | + | chr2_1:14654977-14654996 | Msa0197030:CDS | 55.0% | |
| ! | GAAAGGGCTTGCTTTGCTGC+AGG | - | chr2_1:14656058-14656077 | None:intergenic | 55.0% |
| TGGCAGAAGACTCACTCGCA+TGG | + | chr2_1:14656138-14656157 | Msa0197030:three_prime_UTR | 55.0% | |
| GAGCTCCTTCTCTTGCCAGC+TGG | - | chr2_1:14654985-14655004 | None:intergenic | 60.0% | |
| GAGCTCCTTCTCTTGCCAGC+TGG | - | chr2_1:14654985-14655004 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 14654895 | 14656235 | 14654895 | ID=Msa0197030;Name=Msa0197030 |
| chr2_1 | mRNA | 14654895 | 14656235 | 14654895 | ID=Msa0197030-mRNA-1;Parent=Msa0197030;Name=Msa0197030-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|1|0.83|1|1|1|6|186|173 |
| chr2_1 | exon | 14654895 | 14655048 | 14654895 | ID=Msa0197030-mRNA-1:exon:6189;Parent=Msa0197030-mRNA-1 |
| chr2_1 | exon | 14655150 | 14655244 | 14655150 | ID=Msa0197030-mRNA-1:exon:6190;Parent=Msa0197030-mRNA-1 |
| chr2_1 | exon | 14655436 | 14655553 | 14655436 | ID=Msa0197030-mRNA-1:exon:6191;Parent=Msa0197030-mRNA-1 |
| chr2_1 | exon | 14655696 | 14655712 | 14655696 | ID=Msa0197030-mRNA-1:exon:6192;Parent=Msa0197030-mRNA-1 |
| chr2_1 | exon | 14655800 | 14655862 | 14655800 | ID=Msa0197030-mRNA-1:exon:6193;Parent=Msa0197030-mRNA-1 |
| chr2_1 | exon | 14655975 | 14656235 | 14655975 | ID=Msa0197030-mRNA-1:exon:6194;Parent=Msa0197030-mRNA-1 |
| chr2_1 | CDS | 14654895 | 14655048 | 14654895 | ID=Msa0197030-mRNA-1:cds;Parent=Msa0197030-mRNA-1 |
| chr2_1 | CDS | 14655150 | 14655244 | 14655150 | ID=Msa0197030-mRNA-1:cds;Parent=Msa0197030-mRNA-1 |
| chr2_1 | CDS | 14655436 | 14655553 | 14655436 | ID=Msa0197030-mRNA-1:cds;Parent=Msa0197030-mRNA-1 |
| chr2_1 | CDS | 14655696 | 14655712 | 14655696 | ID=Msa0197030-mRNA-1:cds;Parent=Msa0197030-mRNA-1 |
| chr2_1 | CDS | 14655800 | 14655862 | 14655800 | ID=Msa0197030-mRNA-1:cds;Parent=Msa0197030-mRNA-1 |
| chr2_1 | CDS | 14655975 | 14656049 | 14655975 | ID=Msa0197030-mRNA-1:cds;Parent=Msa0197030-mRNA-1 |
| chr2_1 | three_prime_UTR | 14656050 | 14656235 | 14656050 | ID=Msa0197030-mRNA-1:three_prime_utr;Parent=Msa0197030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
