AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0537310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0537310 MtrunA17_Chr5g0419691 89.946 368 27 1 1 358 1 368 0.0 619
Msa0537310 MtrunA17_Chr4g0011871 88.889 369 30 2 1 358 1 369 0.0 606
Msa0537310 MtrunA17_Chr4g0011881 80.117 342 57 2 12 343 13 353 0.0 555
Msa0537310 MtrunA17_Chr5g0406651 79.300 343 61 1 11 343 12 354 0.0 535
Msa0537310 MtrunA17_Chr4g0011861 90.614 277 15 2 20 285 20 296 0.0 505
Msa0537310 MtrunA17_Chr4g0011921 68.767 365 102 2 4 358 6 368 1.47e-171 487
Msa0537310 MtrunA17_Chr4g0011961 67.302 367 107 4 2 358 4 367 2.19e-171 486
Msa0537310 MtrunA17_Chr4g0011901 66.856 353 105 2 16 358 18 368 4.91e-160 457
Msa0537310 MtrunA17_Chr4g0011981 65.242 351 111 2 18 358 19 368 4.00e-155 445
Msa0537310 MtrunA17_Chr4g0011931 72.260 292 69 3 4 285 6 295 1.03e-143 409
Msa0537310 MtrunA17_Chr7g0218601 55.072 345 138 4 14 343 15 357 1.26e-131 385
Msa0537310 MtrunA17_Chr7g0218611 57.831 332 129 2 23 343 27 358 2.04e-130 382
Msa0537310 MtrunA17_Chr5g0431501 50.291 344 153 4 30 358 34 374 3.50e-115 343
Msa0537310 MtrunA17_Chr5g0431461 50.291 344 153 4 30 358 34 374 3.50e-115 343
Msa0537310 MtrunA17_Chr5g0431511 50.440 341 157 3 30 358 34 374 2.23e-114 342
Msa0537310 MtrunA17_Chr1g0156101 46.389 360 171 5 21 358 24 383 1.19e-104 317
Msa0537310 MtrunA17_Chr1g0156081 46.429 336 158 4 30 343 57 392 4.26e-99 303
Msa0537310 MtrunA17_Chr3g0116681 36.685 368 213 6 4 358 15 375 2.21e-79 251
Msa0537310 MtrunA17_Chr4g0058201 37.143 350 199 7 21 358 24 364 2.86e-74 238
Msa0537310 MtrunA17_Chr4g0058231 35.561 374 211 9 7 358 8 373 1.02e-73 236
Msa0537310 MtrunA17_Chr1g0156061 40.252 318 137 7 30 343 56 324 3.01e-70 227
Msa0537310 MtrunA17_Chr4g0058191 34.877 367 220 8 5 358 2 362 4.73e-69 224
Msa0537310 MtrunA17_Chr2g0310391 34.060 367 227 5 5 358 1 365 3.24e-68 222
Msa0537310 MtrunA17_Chr4g0058281 35.676 370 215 8 4 358 24 385 4.22e-68 222
Msa0537310 MtrunA17_Chr1g0162801 34.722 360 207 7 5 343 8 360 1.34e-67 221
Msa0537310 MtrunA17_Chr6g0472311 36.458 384 211 10 3 358 10 388 1.50e-67 221
Msa0537310 MtrunA17_Chr4g0047661 35.958 381 212 11 3 358 16 389 7.51e-67 219
Msa0537310 MtrunA17_Chr5g0445461 35.215 372 215 8 1 358 13 372 1.20e-66 218
Msa0537310 MtrunA17_Chr5g0403331 35.979 378 215 6 2 358 5 376 1.44e-66 218
Msa0537310 MtrunA17_Chr4g0076161 37.333 375 207 8 3 358 6 371 2.48e-66 218
Msa0537310 MtrunA17_Chr5g0430031 34.840 376 218 7 1 358 9 375 4.09e-66 217
Msa0537310 MtrunA17_Chr3g0116741 35.635 362 205 7 14 358 37 387 5.50e-66 217
Msa0537310 MtrunA17_Chr5g0445451 33.871 372 220 8 1 358 13 372 6.93e-66 216
Msa0537310 MtrunA17_Chr4g0058261 34.181 354 215 5 20 358 53 403 5.10e-65 215
Msa0537310 MtrunA17_Chr5g0403321 35.097 359 206 6 21 358 26 378 9.44e-65 213
Msa0537310 MtrunA17_Chr5g0445381 34.959 369 219 7 2 358 44 403 1.73e-64 213
Msa0537310 MtrunA17_Chr3g0101801 34.341 364 212 5 1 343 8 365 6.45e-64 211
Msa0537310 MtrunA17_Chr5g0445531 35.588 340 201 5 30 358 39 371 6.86e-64 211
Msa0537310 MtrunA17_Chr5g0405001 33.773 379 216 9 4 358 18 385 6.88e-64 211
Msa0537310 MtrunA17_Chr5g0403351 33.957 374 216 6 10 358 8 375 7.11e-64 211
Msa0537310 MtrunA17_Chr5g0445441 34.232 371 222 7 3 358 50 413 1.52e-63 211
Msa0537310 MtrunA17_Chr3g0101721 35.756 344 200 5 30 358 38 375 1.79e-63 210
Msa0537310 MtrunA17_Chr4g0024771 32.796 372 224 8 1 358 13 372 2.92e-63 209
Msa0537310 MtrunA17_Chr5g0446161 33.065 372 226 6 1 358 11 373 3.15e-63 209
Msa0537310 MtrunA17_Chr5g0431671 34.483 348 208 7 24 358 33 373 4.28e-63 209
Msa0537310 MtrunA17_Chr4g0047631 34.959 369 210 10 11 358 25 384 6.66e-63 209
Msa0537310 MtrunA17_Chr3g0101711 33.687 377 215 7 11 358 6 376 6.99e-63 208
Msa0537310 MtrunA17_Chr3g0101571 33.245 376 225 6 2 358 3 371 8.23e-63 208
Msa0537310 MtrunA17_Chr1g0167321 36.264 364 204 6 1 343 1 357 1.09e-62 208
Msa0537310 MtrunA17_Chr3g0101631 34.565 379 210 7 5 358 3 368 1.62e-62 207
Msa0537310 MtrunA17_Chr5g0431641 33.604 369 225 7 3 358 11 372 4.15e-62 206
Msa0537310 MtrunA17_Chr4g0047691 33.858 381 218 9 3 358 16 387 4.94e-62 206
Msa0537310 MtrunA17_Chr4g0047641 33.159 383 221 7 3 358 14 388 8.64e-62 206
Msa0537310 MtrunA17_Chr3g0101691 35.362 345 201 5 30 358 39 377 1.66e-61 205
Msa0537310 MtrunA17_Chr3g0101601 35.537 363 204 7 11 353 11 363 3.39e-61 204
Msa0537310 MtrunA17_Chr1g0162811 33.155 374 224 6 4 358 7 373 3.81e-61 204
Msa0537310 MtrunA17_Chr5g0430101 34.225 374 221 8 1 358 8 372 4.97e-61 204
Msa0537310 MtrunA17_Chr2g0310381 31.421 366 236 4 5 357 1 364 6.78e-61 203
Msa0537310 MtrunA17_Chr3g0101751 34.650 329 194 4 30 343 43 365 8.50e-61 203
Msa0537310 MtrunA17_Chr5g0430111 34.748 377 213 9 3 358 11 375 1.25e-60 201
Msa0537310 MtrunA17_Chr3g0101821 32.782 363 213 6 5 342 1 357 2.31e-60 202
Msa0537310 MtrunA17_Chr8g0361471 32.861 353 211 6 22 358 31 373 3.17e-60 201
Msa0537310 MtrunA17_Chr6g0466331 32.464 345 211 5 30 358 35 373 9.29e-60 200
Msa0537310 MtrunA17_Chr6g0465511 32.464 345 211 5 30 358 35 373 1.07e-59 200
Msa0537310 MtrunA17_Chr3g0101621 35.447 347 198 5 20 353 24 357 1.09e-59 200
Msa0537310 MtrunA17_Chr8g0372251 32.295 353 210 9 27 358 33 377 3.18e-59 199
Msa0537310 MtrunA17_Chr3g0101581 32.615 371 232 5 1 358 9 374 3.22e-59 199
Msa0537310 MtrunA17_Chr3g0101701 34.203 345 205 5 30 358 39 377 3.81e-59 199
Msa0537310 MtrunA17_Chr5g0445421 33.602 372 200 8 1 358 87 425 4.64e-59 199
Msa0537310 MtrunA17_Chr3g0101611 34.746 354 209 5 20 358 29 375 8.03e-59 198
Msa0537310 MtrunA17_Chr5g0430081 34.483 377 218 9 1 358 7 373 9.70e-59 197
Msa0537310 MtrunA17_Chr5g0430131 34.048 373 220 8 3 358 11 374 1.17e-58 197
Msa0537310 MtrunA17_Chr3g0101731 32.190 379 230 6 1 358 1 373 6.11e-58 196
Msa0537310 MtrunA17_Chr6g0484811 31.536 371 232 6 4 358 12 376 7.94e-58 195
Msa0537310 MtrunA17_Chr6g0463801 33.621 348 214 4 21 358 29 369 8.31e-58 195
Msa0537310 MtrunA17_Chr3g0101761 32.692 364 218 5 1 343 1 358 1.08e-57 195
Msa0537310 MtrunA17_Chr6g0463791 35.121 373 215 7 3 358 6 368 4.24e-57 193
Msa0537310 MtrunA17_Chr5g0430091 33.245 376 224 7 1 358 9 375 8.32e-57 192
Msa0537310 MtrunA17_Chr5g0446151 30.946 349 219 5 23 358 35 374 1.66e-56 192
Msa0537310 MtrunA17_Chr8g0390881 30.504 377 232 8 4 358 8 376 1.85e-56 192
Msa0537310 MtrunA17_Chr3g0101671 30.026 383 237 6 1 358 1 377 3.22e-56 191
Msa0537310 MtrunA17_Chr3g0101651 34.639 332 191 6 30 343 39 362 2.24e-55 189
Msa0537310 MtrunA17_Chr2g0280261 34.524 336 197 5 21 343 26 351 3.40e-55 188
Msa0537310 MtrunA17_Chr3g0101831 31.373 357 223 5 2 342 8 358 8.12e-55 187
Msa0537310 MtrunA17_Chr6g0484841 30.387 362 223 7 16 358 24 375 2.38e-54 186
Msa0537310 MtrunA17_Chr8g0357421 33.945 327 197 4 30 343 38 358 5.51e-54 185
Msa0537310 MtrunA17_Chr3g0101661 32.565 347 213 5 27 358 36 376 1.19e-53 184
Msa0537310 MtrunA17_Chr3g0101811 31.472 394 228 7 1 358 1 388 1.79e-53 184
Msa0537310 MtrunA17_Chr8g0382901 31.268 355 228 6 15 358 477 826 1.95e-53 189
Msa0537310 MtrunA17_Chr8g0382901 30.084 359 221 5 10 358 9 347 1.14e-49 178
Msa0537310 MtrunA17_Chr8g0357431 33.841 328 197 4 30 343 38 359 3.72e-53 183
Msa0537310 MtrunA17_Chr4g0035921 29.319 382 232 9 4 358 15 385 7.32e-53 182
Msa0537310 MtrunA17_Chr5g0401681 32.804 378 226 8 1 358 1 370 1.38e-52 181
Msa0537310 MtrunA17_Chr8g0344181 31.884 345 214 7 30 358 39 378 1.38e-51 179
Msa0537310 MtrunA17_Chr4g0020041 30.400 375 234 7 4 358 7 374 2.88e-51 178
Msa0537310 MtrunA17_Chr3g0086651 30.518 367 236 5 6 357 11 373 1.82e-50 176
Msa0537310 MtrunA17_Chr3g0086691 31.858 339 206 7 38 357 41 373 2.29e-50 176
Msa0537310 MtrunA17_Chr8g0344151 30.145 345 220 7 30 358 37 376 1.47e-49 173
Msa0537310 MtrunA17_Chr3g0086661 30.245 367 237 5 6 357 11 373 2.90e-49 172
Msa0537310 MtrunA17_Chr1g0174481 31.461 356 222 6 19 358 24 373 6.20e-49 172
Msa0537310 MtrunA17_Chr3g0094231 26.879 346 237 7 23 357 30 370 1.58e-48 171
Msa0537310 MtrunA17_Chr5g0445751 33.670 297 179 5 3 287 17 307 6.23e-48 164
Msa0537310 MtrunA17_Chr3g0094171 30.508 354 232 5 16 357 26 377 8.67e-48 169
Msa0537310 MtrunA17_Chr7g0254641 29.830 352 217 8 30 358 38 382 8.90e-48 169
Msa0537310 MtrunA17_Chr3g0101741 32.237 304 188 4 67 358 3 300 2.05e-47 166
Msa0537310 MtrunA17_Chr5g0401691 30.541 370 231 9 1 358 30 385 2.77e-46 165
Msa0537310 MtrunA17_Chr1g0174461 27.614 373 252 4 2 358 8 378 7.95e-46 163
Msa0537310 MtrunA17_Chr4g0061381 28.739 341 212 9 38 357 40 370 1.55e-45 162
Msa0537310 MtrunA17_Chr8g0344191 29.111 371 240 8 6 358 44 409 9.11e-45 161
Msa0537310 MtrunA17_Chr2g0304871 30.563 373 235 10 7 357 15 385 1.46e-44 160
Msa0537310 MtrunA17_Chr1g0200961 29.609 358 224 8 4 343 7 354 1.52e-44 160
Msa0537310 MtrunA17_Chr4g0030701 29.226 349 226 5 29 358 35 381 6.61e-44 158
Msa0537310 MtrunA17_Chr4g0057001 29.752 363 234 8 10 358 33 388 1.50e-43 157
Msa0537310 MtrunA17_Chr6g0466941 28.756 386 231 11 7 357 12 388 7.19e-43 155
Msa0537310 MtrunA17_Chr4g0046631 29.805 359 227 9 19 357 36 389 1.70e-42 154
Msa0537310 MtrunA17_Chr3g0084921 28.242 347 229 5 30 358 36 380 2.41e-42 154
Msa0537310 MtrunA17_Chr6g0451751 28.982 383 236 10 7 357 16 394 4.50e-42 154
Msa0537310 MtrunA17_Chr1g0160851 26.575 365 252 5 5 358 10 369 6.87e-42 152
Msa0537310 MtrunA17_Chr8g0339311 28.809 361 226 9 22 357 38 392 9.52e-42 152
Msa0537310 MtrunA17_Chr6g0463611 35.117 299 165 9 4 284 21 308 1.15e-41 148
Msa0537310 MtrunA17_Chr1g0174441 27.019 359 243 5 18 358 43 400 1.60e-41 152
Msa0537310 MtrunA17_Chr4g0053621 30.539 334 204 7 30 342 32 358 5.03e-41 150
Msa0537310 MtrunA17_Chr1g0174451 26.331 357 244 6 19 358 25 379 3.82e-40 148
Msa0537310 MtrunA17_Chr4g0046691 33.898 236 141 5 21 244 30 262 4.58e-40 143
Msa0537310 MtrunA17_Chr6g0466901 28.497 386 231 12 7 357 12 387 5.41e-40 147
Msa0537310 MtrunA17_Chr8g0356001 29.067 375 244 8 3 358 7 378 1.44e-39 146
Msa0537310 MtrunA17_Chr4g0008101 27.763 389 238 10 4 357 14 394 3.36e-39 145
Msa0537310 MtrunA17_Chr7g0224551 27.937 383 233 11 1 358 5 369 3.92e-39 145
Msa0537310 MtrunA17_Chr7g0224561 27.937 383 233 11 1 358 5 369 4.17e-39 145
Msa0537310 MtrunA17_Chr7g0255531 25.995 377 250 8 2 358 1 368 6.92e-39 144
Msa0537310 MtrunA17_Chr4g0039391 28.994 338 215 9 39 358 45 375 1.10e-38 144
Msa0537310 MtrunA17_Chr1g0205361 26.648 364 251 5 6 358 11 369 1.35e-38 144
Msa0537310 MtrunA17_Chr7g0235551 26.781 351 240 6 23 358 27 375 2.07e-38 143
Msa0537310 MtrunA17_Chr6g0451741 28.571 392 229 12 4 357 38 416 2.60e-38 144
Msa0537310 MtrunA17_Chr2g0296651 30.667 375 229 9 3 358 8 370 3.17e-38 142
Msa0537310 MtrunA17_Chr6g0451641 29.688 384 236 16 2 357 10 387 3.36e-38 143
Msa0537310 MtrunA17_Chr4g0052861 27.957 372 238 9 5 358 11 370 6.14e-38 142
Msa0537310 MtrunA17_Chr1g0174471 27.536 345 231 5 31 358 52 394 8.16e-38 142
Msa0537310 MtrunA17_Chr6g0451691 27.595 395 230 13 7 357 16 398 9.15e-38 142
Msa0537310 MtrunA17_Chr1g0164211 29.226 349 217 8 28 358 30 366 1.01e-37 141
Msa0537310 MtrunA17_Chr4g0052881 31.006 358 214 11 4 342 12 355 1.44e-37 140
Msa0537310 MtrunA17_Chr8g0339331 26.629 353 230 7 30 358 39 386 2.57e-37 140
Msa0537310 MtrunA17_Chr4g0030711 27.434 339 224 5 40 358 48 384 3.63e-37 140
Msa0537310 MtrunA17_Chr2g0296661 29.102 323 201 9 41 342 44 359 1.23e-36 138
Msa0537310 MtrunA17_Chr7g0258221 28.613 346 227 6 30 358 35 377 2.11e-36 137
Msa0537310 MtrunA17_Chr4g0052851 29.231 325 205 9 30 342 34 345 2.62e-36 137
Msa0537310 MtrunA17_Chr7g0265611 28.302 371 233 10 12 358 26 387 3.00e-36 137
Msa0537310 MtrunA17_Chr8g0355961 28.169 355 235 7 6 343 12 363 4.24e-36 137
Msa0537310 MtrunA17_Chr1g0205371 26.912 353 240 7 4 343 8 355 4.71e-36 137
Msa0537310 MtrunA17_Chr5g0395331 27.731 357 240 7 16 358 24 376 5.83e-36 136
Msa0537310 MtrunA17_Chr4g0046351 27.507 349 224 9 29 358 34 372 6.97e-36 136
Msa0537310 MtrunA17_Chr4g0046321 26.934 349 226 9 29 358 34 372 1.44e-35 135
Msa0537310 MtrunA17_Chr6g0451781 28.732 355 210 8 37 357 82 427 1.71e-35 136
Msa0537310 MtrunA17_Chr6g0458561 25.654 382 251 10 2 358 26 399 1.88e-35 135
Msa0537310 MtrunA17_Chr4g0046331 27.660 376 238 11 5 358 9 372 3.21e-35 134
Msa0537310 MtrunA17_Chr5g0395321 26.596 376 241 8 2 358 10 369 7.12e-35 134
Msa0537310 MtrunA17_Chr1g0207841 27.397 365 239 5 18 358 24 386 2.09e-34 132
Msa0537310 MtrunA17_Chr3g0082701 26.842 380 233 10 15 357 24 395 3.26e-34 132
Msa0537310 MtrunA17_Chr1g0200951 28.070 342 223 8 32 358 64 397 3.82e-34 132
Msa0537310 MtrunA17_Chr4g0017411 27.424 361 232 10 11 358 15 358 5.02e-33 128
Msa0537310 MtrunA17_Chr4g0039901 27.746 346 235 5 24 358 30 371 5.46e-33 128
Msa0537310 MtrunA17_Chr8g0362481 26.710 307 209 4 67 358 3 308 9.01e-33 127
Msa0537310 MtrunA17_Chr8g0362701 28.075 374 246 7 2 358 10 377 1.49e-32 127
Msa0537310 MtrunA17_Chr5g0395381 26.525 377 217 10 1 358 9 344 2.53e-32 126
Msa0537310 MtrunA17_Chr7g0246131 26.184 359 242 8 4 343 7 361 4.17e-32 125
Msa0537310 MtrunA17_Chr5g0431591 30.256 195 129 3 166 358 1 190 1.01e-31 121
Msa0537310 MtrunA17_Chr7g0246221 26.790 377 247 10 3 357 5 374 1.61e-31 124
Msa0537310 MtrunA17_Chr4g0011851 89.062 64 7 0 280 343 9 72 1.74e-31 118
Msa0537310 MtrunA17_Chr2g0314731 25.745 369 253 7 4 358 8 369 3.18e-31 123
Msa0537310 MtrunA17_Chr2g0314721 25.876 371 250 7 5 358 18 380 3.23e-31 123
Msa0537310 MtrunA17_Chr4g0056951 25.758 330 231 4 41 358 56 383 2.20e-30 121
Msa0537310 MtrunA17_Chr4g0046671 29.134 254 158 7 30 263 44 295 2.55e-30 117
Msa0537310 MtrunA17_Chr8g0351801 27.193 342 221 8 39 357 44 380 2.61e-30 121
Msa0537310 MtrunA17_Chr1g0174421 28.814 295 194 6 4 285 23 314 9.18e-30 116
Msa0537310 MtrunA17_Chr7g0258211 25.982 331 231 5 38 357 48 375 1.35e-29 119
Msa0537310 MtrunA17_Chr5g0430171 34.081 223 130 4 1 212 9 225 1.45e-29 113
Msa0537310 MtrunA17_Chr1g0213671 28.242 347 228 8 30 358 35 378 4.25e-29 117
Msa0537310 MtrunA17_Chr5g0445411 39.241 158 83 3 2 148 20 175 3.29e-28 108
Msa0537310 MtrunA17_Chr5g0402971 25.275 273 176 8 17 265 27 295 3.74e-27 109
Msa0537310 MtrunA17_Chr1g0176831 24.590 366 261 5 4 358 38 399 6.97e-27 111
Msa0537310 MtrunA17_Chr8g0370641 24.866 374 252 10 9 355 16 387 1.73e-26 110
Msa0537310 MtrunA17_Chr3g0116721 30.890 191 126 4 127 313 2 190 8.39e-26 102
Msa0537310 MtrunA17_Chr7g0246151 26.190 336 225 8 40 358 45 374 8.99e-26 107
Msa0537310 MtrunA17_Chr4g0030741 28.793 323 203 9 3 310 39 349 1.54e-25 105
Msa0537310 MtrunA17_Chr8g0370651 23.947 380 257 10 4 355 16 391 4.32e-25 106
Msa0537310 MtrunA17_Chr5g0430071 32.479 234 144 4 132 358 2 228 5.79e-25 103
Msa0537310 MtrunA17_Chr7g0246181 25.545 321 216 7 40 343 45 359 9.13e-25 105
Msa0537310 MtrunA17_Chr1g0197891 24.194 372 253 9 4 358 9 368 1.96e-24 103
Msa0537310 MtrunA17_Chr7g0246121 26.113 337 222 9 40 358 45 372 3.31e-24 103
Msa0537310 MtrunA17_Chr3g0107611 24.011 354 238 11 27 353 48 397 3.46e-24 103
Msa0537310 MtrunA17_Chr2g0310371 41.860 129 71 3 5 130 1 128 5.00e-24 96.3
Msa0537310 MtrunA17_Chr4g0011941 69.444 72 22 0 287 358 1 72 6.72e-24 97.4
Msa0537310 MtrunA17_Chr1g0197851 25.000 380 248 11 1 358 4 368 7.82e-24 102
Msa0537310 MtrunA17_Chr1g0197881 24.800 375 246 11 4 358 9 367 3.52e-23 100
Msa0537310 MtrunA17_Chr1g0197871 23.450 371 257 8 4 358 9 368 5.71e-23 99.8
Msa0537310 MtrunA17_Chr1g0198191 24.100 361 239 11 7 343 22 371 1.81e-22 98.6
Msa0537310 MtrunA17_Chr5g0431631 43.609 133 62 3 10 129 29 161 2.65e-22 92.0
Msa0537310 MtrunA17_Chr5g0419451 24.348 345 229 10 31 358 62 391 8.21e-22 96.7
Msa0537310 MtrunA17_Chr6g0451801 26.441 295 169 11 11 265 16 302 1.19e-20 91.3
Msa0537310 MtrunA17_Chr5g0409051 24.425 348 224 9 26 343 26 364 9.23e-20 90.5
Msa0537310 MtrunA17_Chr2g0280071 24.390 369 234 9 5 343 41 394 1.38e-19 90.1
Msa0537310 MtrunA17_Chr5g0432751 23.851 348 240 7 30 358 34 375 2.29e-19 89.4
Msa0537310 MtrunA17_Chr5g0430051 41.667 108 62 1 1 108 10 116 3.31e-19 82.4
Msa0537310 MtrunA17_Chr1g0210091 23.276 348 223 9 38 358 74 404 6.52e-18 85.1
Msa0537310 MtrunA17_Chr6g0484771 31.915 141 81 2 66 196 2 137 6.61e-18 79.7
Msa0537310 MtrunA17_Chr6g0451681 33.333 156 92 3 6 149 37 192 1.02e-17 84.3
Msa0537310 MtrunA17_Chr4g0074581 24.128 344 216 14 30 343 70 398 1.43e-17 84.0
Msa0537310 MtrunA17_Chr3g0107541 22.485 338 236 8 38 353 59 392 2.48e-17 83.2
Msa0537310 MtrunA17_Chr8g0377341 23.684 342 235 10 32 358 70 400 2.01e-16 80.5
Msa0537310 MtrunA17_Chr3g0117321 42.268 97 55 1 31 127 9 104 2.29e-16 74.7
Msa0537310 MtrunA17_Chr1g0207851 26.246 301 192 7 18 294 24 318 4.06e-16 78.6
Msa0537310 MtrunA17_Chr2g0310361 28.889 135 95 1 151 285 5 138 1.15e-15 73.6
Msa0537310 MtrunA17_Chr3g0105751 24.430 307 206 9 2 285 18 321 1.36e-15 77.4
Msa0537310 MtrunA17_Chr2g0334021 23.754 341 219 9 29 343 35 360 1.69e-15 77.4
Msa0537310 MtrunA17_Chr2g0280081 26.168 321 190 12 54 343 57 361 3.02e-15 77.4
Msa0537310 MtrunA17_Chr2g0280081 24.684 316 201 9 54 343 558 862 1.25e-13 72.4
Msa0537310 MtrunA17_Chr5g0446101 23.196 194 140 4 166 358 1 186 5.29e-15 75.1
Msa0537310 MtrunA17_Chr5g0445541 44.231 104 50 4 2 100 10 110 5.64e-15 71.2
Msa0537310 MtrunA17_Chr8g0364651 25.434 346 204 14 30 343 31 354 6.41e-14 72.8
Msa0537310 MtrunA17_Chr2g0280121 24.551 334 204 11 47 343 45 367 1.01e-13 72.0
Msa0537310 MtrunA17_Chr6g0451761 26.374 273 169 9 7 265 17 271 7.66e-13 68.2
Msa0537310 MtrunA17_Chr2g0280001 28.659 164 102 4 5 155 41 202 1.05e-12 66.6
Msa0537310 MtrunA17_Chr8g0351421 23.429 350 214 12 1 322 15 338 2.26e-12 68.2
Msa0537310 MtrunA17_Chr8g0387101 26.101 318 194 10 54 343 59 363 5.75e-12 66.6
Msa0537310 MtrunA17_Chr5g0445341 45.679 81 33 2 67 136 3 83 9.86e-12 60.5
Msa0537310 MtrunA17_Chr4g0058211 35.802 81 52 0 278 358 10 90 1.21e-11 63.5
Msa0537310 MtrunA17_Chr2g0280051 26.768 198 120 7 5 183 51 242 1.42e-11 64.7
Msa0537310 MtrunA17_Chr6g0477081 24.201 219 146 6 143 358 1 202 1.47e-11 63.9
Msa0537310 MtrunA17_Chr1g0160861 27.273 154 107 3 206 358 61 210 1.74e-11 64.7
Msa0537310 MtrunA17_Chr6g0458571 39.506 81 47 2 20 98 45 125 3.62e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0537310 AT4G31500.1 40.822 365 205 2 4 358 4 367 2.71e-97 298
Msa0537310 AT5G57260.1 39.888 356 195 6 19 358 20 372 2.06e-83 262
Msa0537310 AT3G26300.1 39.623 371 204 6 1 358 6 369 5.67e-80 253
Msa0537310 AT3G26320.1 39.385 358 200 5 14 358 16 369 2.40e-79 251
Msa0537310 AT4G13770.1 34.890 364 224 3 7 358 8 370 2.64e-79 251
Msa0537310 AT3G26330.1 40.988 344 186 5 28 358 30 369 1.40e-76 244
Msa0537310 AT2G02580.1 41.595 351 186 6 5 342 9 353 3.18e-76 243
Msa0537310 AT3G26310.1 36.957 368 215 5 4 358 5 368 1.90e-74 239
Msa0537310 AT5G25140.1 36.559 372 215 7 1 358 1 365 1.54e-72 234
Msa0537310 AT3G26290.1 37.982 337 192 5 19 342 21 353 3.28e-72 233
Msa0537310 AT3G26290.2 37.982 337 192 5 19 342 34 366 3.98e-72 233
Msa0537310 AT3G48280.1 32.609 368 228 5 1 358 2 359 5.84e-71 229
Msa0537310 AT3G48270.1 34.911 338 199 5 31 358 33 359 2.94e-70 228
Msa0537310 AT3G48320.1 35.127 353 208 5 1 343 4 345 9.51e-70 226
Msa0537310 AT5G25180.1 35.849 371 219 6 1 358 1 365 1.99e-69 226
Msa0537310 AT4G13310.2 35.311 354 210 6 18 358 21 368 1.15e-66 216
Msa0537310 AT3G48310.1 33.238 349 212 5 20 358 23 360 3.04e-66 217
Msa0537310 AT3G26190.1 35.988 339 198 8 20 342 19 354 1.55e-65 216
Msa0537310 AT4G13310.1 35.311 354 210 6 18 358 21 368 3.21e-65 215
Msa0537310 AT3G26170.1 34.225 374 226 8 2 358 3 373 2.22e-64 213
Msa0537310 AT5G25120.1 34.409 372 223 8 1 358 1 365 2.70e-64 212
Msa0537310 AT1G13110.1 33.687 377 228 8 2 358 1 375 2.93e-64 213
Msa0537310 AT3G26200.1 37.386 329 187 8 30 342 29 354 3.14e-64 212
Msa0537310 AT3G26180.1 33.422 374 229 8 2 358 3 373 3.27e-63 209
Msa0537310 AT3G44250.1 35.843 332 193 8 27 342 26 353 1.51e-62 208
Msa0537310 AT5G25130.1 34.677 372 222 6 1 358 1 365 2.55e-62 207
Msa0537310 AT3G26280.1 35.813 363 211 10 14 358 17 375 6.37e-62 206
Msa0537310 AT3G48300.1 34.320 338 201 6 31 358 31 357 6.38e-62 206
Msa0537310 AT3G48300.2 34.320 338 201 6 31 358 33 359 6.68e-62 206
Msa0537310 AT3G26280.2 35.813 363 211 10 14 358 34 392 9.46e-62 206
Msa0537310 AT4G13290.1 33.521 355 207 7 18 358 22 361 1.50e-61 205
Msa0537310 AT1G13090.2 35.465 344 204 7 30 358 29 369 4.60e-61 204
Msa0537310 AT3G48290.1 33.239 352 214 6 17 358 21 361 1.20e-60 202
Msa0537310 AT1G13080.1 34.225 374 222 8 6 358 3 373 9.35e-60 201
Msa0537310 AT3G26210.1 34.821 336 201 8 38 358 40 372 1.37e-58 197
Msa0537310 AT3G26830.1 32.353 374 231 7 2 358 1 369 4.37e-58 196
Msa0537310 AT3G53300.1 33.639 327 200 8 30 341 29 353 6.65e-57 193
Msa0537310 AT3G26270.1 34.637 358 213 9 18 358 21 374 8.10e-57 193
Msa0537310 AT3G53280.1 32.831 332 202 9 27 342 26 352 1.54e-56 192
Msa0537310 AT2G30770.1 31.765 340 215 5 30 358 34 367 3.35e-56 191
Msa0537310 AT3G26150.1 31.551 374 236 8 2 358 3 373 7.26e-56 190
Msa0537310 AT2G30750.1 34.718 337 202 6 18 343 23 352 5.87e-55 188
Msa0537310 AT3G48290.2 30.952 378 214 7 17 358 21 387 6.72e-55 188
Msa0537310 AT1G11610.1 31.692 325 205 5 30 343 34 352 8.84e-55 187
Msa0537310 AT2G24180.1 33.129 326 202 5 30 342 37 359 1.39e-54 187
Msa0537310 AT1G11610.2 31.692 325 205 5 30 343 34 352 1.43e-54 187
Msa0537310 AT3G26160.1 32.659 346 213 8 30 358 31 373 5.54e-54 185
Msa0537310 AT5G24960.2 33.828 337 207 5 18 343 22 353 7.64e-54 182
Msa0537310 AT5G24950.1 31.471 340 217 5 30 358 33 367 9.84e-54 184
Msa0537310 AT1G13100.1 32.938 337 204 7 39 358 38 369 6.00e-53 182
Msa0537310 AT5G24960.1 33.828 337 207 5 18 343 22 353 1.13e-52 182
Msa0537310 AT3G26220.1 34.582 347 207 9 14 342 14 358 4.86e-52 180
Msa0537310 AT5G04330.1 31.714 350 214 11 29 358 32 376 1.29e-51 179
Msa0537310 AT3G26230.1 34.140 372 223 10 6 358 3 371 1.64e-51 179
Msa0537310 AT5G42590.1 32.486 354 219 7 4 343 5 352 8.34e-51 177
Msa0537310 AT4G36220.1 30.682 352 202 9 37 358 48 387 9.71e-49 172
Msa0537310 AT5G06900.1 30.518 367 240 5 3 357 8 371 1.01e-48 171
Msa0537310 AT5G67310.1 31.892 370 228 10 4 358 19 379 2.94e-47 167
Msa0537310 AT5G07990.1 29.032 372 240 8 2 357 6 369 5.39e-47 167
Msa0537310 AT4G37330.1 32.418 364 218 11 11 358 14 365 1.32e-46 166
Msa0537310 AT3G25180.2 30.029 343 222 7 31 357 40 380 3.65e-46 162
Msa0537310 AT3G25180.1 30.029 343 222 7 31 357 40 380 3.32e-45 162
Msa0537310 AT4G37320.1 30.585 376 228 12 1 358 8 368 3.49e-45 162
Msa0537310 AT1G01280.1 29.326 341 215 7 38 358 41 375 1.10e-44 160
Msa0537310 AT4G20240.2 30.028 353 228 6 18 358 22 367 1.70e-44 157
Msa0537310 AT4G12300.1 29.891 368 239 8 5 358 20 382 2.35e-44 160
Msa0537310 AT4G20240.1 30.028 353 228 6 18 358 22 367 1.11e-43 157
Msa0537310 AT5G57220.1 29.189 370 229 11 10 358 6 363 2.68e-43 156
Msa0537310 AT4G37430.1 29.894 378 230 10 4 358 3 368 1.01e-42 155
Msa0537310 AT4G37410.1 30.645 372 223 10 10 358 6 365 2.78e-42 154
Msa0537310 AT4G12320.1 28.726 369 244 7 5 358 20 384 1.03e-41 153
Msa0537310 AT4G37340.1 28.841 371 233 10 6 358 11 368 1.36e-41 152
Msa0537310 AT5G10600.1 30.108 372 234 8 2 358 23 383 3.64e-41 151
Msa0537310 AT4G37310.1 29.679 374 234 11 6 358 11 376 4.27e-41 151
Msa0537310 AT4G37400.1 28.989 376 236 10 1 358 1 363 5.00e-41 150
Msa0537310 AT4G31940.1 27.083 384 248 8 5 358 8 389 1.62e-40 149
Msa0537310 AT4G31970.1 27.202 386 244 10 5 358 8 388 2.14e-40 149
Msa0537310 AT2G23190.1 29.504 383 226 12 1 356 45 410 2.67e-40 149
Msa0537310 AT1G13090.1 32.714 269 164 6 30 284 29 294 2.98e-40 144
Msa0537310 AT5G10610.1 29.282 362 228 7 15 358 16 367 4.64e-40 148
Msa0537310 AT4G37370.1 30.027 373 227 11 4 358 11 367 4.97e-40 148
Msa0537310 AT5G35715.1 28.339 307 204 7 67 358 3 308 7.61e-40 146
Msa0537310 AT2G25160.2 25.789 380 254 9 4 358 7 383 7.68e-39 143
Msa0537310 AT5G44620.1 29.042 334 222 5 38 358 55 386 2.29e-38 144
Msa0537310 AT2G25160.1 25.789 380 254 9 4 358 7 383 2.82e-38 143
Msa0537310 AT2G23220.1 30.000 360 220 11 16 356 35 381 1.14e-37 142
Msa0537310 AT4G37360.1 29.144 374 235 11 4 358 6 368 1.41e-37 141
Msa0537310 AT2G42250.1 26.216 370 255 5 5 358 11 378 5.69e-37 140
Msa0537310 AT5G36220.1 30.239 377 223 14 7 358 13 374 4.93e-36 137
Msa0537310 AT1G33720.1 28.496 379 239 9 4 358 9 379 7.86e-36 136
Msa0537310 AT2G40890.1 27.487 382 238 11 1 358 1 367 9.27e-36 136
Msa0537310 AT4G15360.1 25.000 368 263 2 4 358 12 379 1.41e-35 136
Msa0537310 AT5G06905.1 27.123 365 247 8 10 358 9 370 3.03e-35 135
Msa0537310 AT3G20090.2 28.919 370 245 6 4 358 15 381 6.16e-35 134
Msa0537310 AT1G74550.1 28.032 371 231 10 5 358 3 354 7.20e-35 134
Msa0537310 AT1G13080.2 33.607 244 151 6 121 358 17 255 8.03e-35 132
Msa0537310 AT3G20110.1 25.815 368 258 4 1 358 14 376 1.72e-33 130
Msa0537310 AT3G20950.1 25.538 372 251 7 3 353 12 378 2.73e-33 130
Msa0537310 AT3G28740.1 28.933 356 223 10 21 358 33 376 4.25e-33 129
Msa0537310 AT3G20940.1 26.062 353 241 6 16 353 28 375 4.36e-33 129
Msa0537310 AT2G45550.1 28.191 376 246 9 3 358 8 379 1.74e-32 127
Msa0537310 AT2G45560.1 27.968 379 243 10 3 358 8 379 2.96e-32 127
Msa0537310 AT4G12310.1 28.378 370 244 7 5 358 22 386 3.55e-32 126
Msa0537310 AT4G31950.1 26.330 376 249 10 5 358 8 377 1.21e-31 125
Msa0537310 AT5G09970.1 28.613 346 220 9 31 358 71 407 1.35e-31 125
Msa0537310 AT2G22330.1 28.177 362 233 10 5 343 34 391 1.66e-31 125
Msa0537310 AT2G22330.2 28.177 362 233 10 5 343 57 414 1.88e-31 125
Msa0537310 AT3G20140.1 25.074 339 242 2 30 358 43 379 4.74e-31 123
Msa0537310 AT2G14100.1 25.397 378 247 6 1 358 18 380 7.82e-31 122
Msa0537310 AT1G50520.1 25.648 386 245 11 2 358 10 382 8.89e-31 122
Msa0537310 AT4G15330.1 24.728 368 260 5 4 358 12 375 1.52e-30 122
Msa0537310 AT3G52970.2 27.179 390 242 10 4 358 14 396 1.64e-30 122
Msa0537310 AT4G22710.1 26.923 338 227 7 36 358 60 392 1.75e-30 122
Msa0537310 AT4G39950.1 27.164 335 221 7 30 343 57 389 2.33e-30 121
Msa0537310 AT4G39950.2 27.164 335 221 7 30 343 97 429 3.00e-30 121
Msa0537310 AT3G52970.1 27.660 376 244 10 4 358 14 382 3.91e-30 120
Msa0537310 AT3G20130.1 25.526 333 236 2 36 358 49 379 4.16e-30 120
Msa0537310 AT4G22690.1 26.627 338 228 7 36 358 91 423 8.38e-30 120
Msa0537310 AT1G79370.1 25.500 400 249 13 1 358 13 405 2.95e-29 118
Msa0537310 AT2G05180.1 26.287 369 252 4 9 358 12 379 3.26e-29 117
Msa0537310 AT4G12330.1 23.512 336 237 5 38 358 55 385 1.34e-28 116
Msa0537310 AT3G61040.2 27.119 354 221 8 26 358 30 367 1.34e-28 115
Msa0537310 AT3G61040.1 27.119 354 221 8 26 358 30 367 3.69e-28 115
Msa0537310 AT2G45570.1 27.729 339 222 8 38 358 47 380 1.01e-27 114
Msa0537310 AT2G27000.1 25.595 336 233 3 36 358 46 377 1.23e-27 114
Msa0537310 AT1G74540.1 23.873 377 251 9 1 358 1 360 2.61e-27 112
Msa0537310 AT2G45580.3 27.941 340 219 8 39 358 48 381 5.35e-27 110
Msa0537310 AT1G58260.1 25.132 378 253 10 3 353 9 383 6.02e-27 112
Msa0537310 AT1G50560.1 22.997 387 255 10 2 358 10 383 6.17e-27 112
Msa0537310 AT2G45580.1 27.941 340 219 8 39 358 48 381 9.20e-27 111
Msa0537310 AT3G20960.2 25.676 370 253 4 9 358 12 379 3.35e-26 109
Msa0537310 AT5G05260.2 24.309 362 243 10 22 356 35 392 4.76e-26 109
Msa0537310 AT3G32047.1 22.121 330 242 3 40 358 53 378 9.98e-26 108
Msa0537310 AT3G20100.1 23.733 375 257 6 9 358 9 379 1.03e-25 108
Msa0537310 AT5G42580.1 23.642 313 215 3 56 358 66 364 1.48e-25 107
Msa0537310 AT3G20120.4 25.000 372 260 3 4 358 9 378 3.25e-25 107
Msa0537310 AT3G20080.2 25.872 344 234 5 30 358 43 380 3.96e-25 106
Msa0537310 AT3G20080.1 25.872 344 234 5 30 358 43 380 3.96e-25 106
Msa0537310 AT2G46660.1 25.000 340 230 9 31 358 72 398 4.86e-25 106
Msa0537310 AT1G16410.2 24.000 400 251 12 1 354 1 393 6.44e-25 105
Msa0537310 AT1G66540.1 26.923 260 165 6 116 358 4 255 7.07e-25 104
Msa0537310 AT3G26180.2 41.667 144 78 4 218 358 99 239 9.18e-25 103
Msa0537310 AT3G26180.2 33.929 112 73 1 2 113 3 113 4.37e-14 73.2
Msa0537310 AT1G16410.1 24.000 400 251 12 1 354 1 393 1.29e-24 105
Msa0537310 AT3G53290.1 28.467 274 159 8 83 342 11 261 3.68e-23 100
Msa0537310 AT4G15350.1 24.398 332 235 5 40 358 45 373 4.18e-23 100
Msa0537310 AT5G47990.1 24.462 372 256 6 9 358 12 380 4.54e-23 100
Msa0537310 AT1G11600.1 24.928 349 233 12 17 343 23 364 5.73e-23 100
Msa0537310 AT4G20235.1 30.159 252 152 7 1 246 3 236 7.97e-23 98.2
Msa0537310 AT5G05260.1 22.404 366 223 9 17 356 30 360 8.12e-23 99.8
Msa0537310 AT3G10560.1 26.575 365 228 13 4 343 19 368 8.26e-23 99.8
Msa0537310 AT3G61880.1 23.876 356 244 9 17 358 56 398 1.53e-22 99.4
Msa0537310 AT3G61880.2 23.876 356 244 9 17 358 56 398 2.01e-22 99.0
Msa0537310 AT5G35917.1 23.699 346 231 10 16 332 31 372 2.23e-22 98.6
Msa0537310 AT5G04630.1 24.661 369 233 15 4 343 12 364 2.54e-22 98.6
Msa0537310 AT1G16400.1 24.930 357 227 11 30 354 45 392 7.01e-22 97.1
Msa0537310 AT4G15380.1 25.600 375 243 7 9 358 12 375 1.29e-21 96.3
Msa0537310 AT2G27010.1 24.085 328 230 4 36 358 42 355 2.89e-21 95.1
Msa0537310 AT1G66540.2 28.431 204 134 4 159 358 1 196 3.39e-20 90.5
Msa0537310 AT1G01190.1 22.674 344 232 11 31 358 75 400 3.77e-20 92.0
Msa0537310 AT1G01190.2 22.674 344 232 11 31 358 80 405 4.39e-20 92.0
Msa0537310 AT1G74110.1 24.363 353 233 12 31 358 65 408 7.97e-20 91.3
Msa0537310 AT5G25900.1 25.595 336 207 9 35 343 49 368 1.21e-19 90.5
Msa0537310 AT3G20090.1 25.664 226 165 2 134 358 20 243 2.65e-19 88.6
Msa0537310 AT3G20130.2 21.708 281 208 2 88 358 73 351 6.75e-19 88.2
Msa0537310 AT4G20235.2 40.000 100 59 1 147 246 4 102 2.39e-18 81.3
Msa0537310 AT1G28430.1 24.339 378 252 8 1 353 4 372 6.99e-18 85.1
Msa0537310 AT4G15330.2 21.196 368 245 6 4 358 12 347 2.58e-17 83.6
Msa0537310 AT1G33730.1 25.523 239 170 4 125 358 8 243 3.74e-16 79.3
Msa0537310 AT1G33730.2 25.523 239 170 4 125 358 8 243 3.74e-16 79.3
Msa0537310 AT3G20960.1 22.662 278 196 4 95 358 4 276 5.47e-16 79.3
Msa0537310 AT1G64940.1 25.263 380 234 16 1 343 1 367 7.52e-16 79.0
Msa0537310 AT1G33720.4 26.141 241 166 4 125 358 12 247 1.19e-15 77.8
Msa0537310 AT1G33720.3 26.141 241 166 4 125 358 12 247 1.19e-15 77.8
Msa0537310 AT1G33720.5 26.141 241 166 4 125 358 12 247 1.19e-15 77.8
Msa0537310 AT2G45560.3 27.350 234 148 7 3 217 8 238 3.76e-15 74.7
Msa0537310 AT2G45560.2 27.350 234 148 7 3 217 8 238 5.09e-15 75.5
Msa0537310 AT2G12190.1 24.425 348 215 13 30 343 33 366 1.49e-14 75.1
Msa0537310 AT5G36220.2 27.885 208 135 5 156 358 31 228 1.61e-14 74.3
Msa0537310 AT3G53305.1 28.571 168 107 4 67 221 3 170 1.84e-14 73.9
Msa0537310 AT2G45580.2 31.447 159 100 4 206 358 72 227 2.09e-14 73.9
Msa0537310 AT3G03470.1 25.333 375 230 15 2 343 6 363 4.03e-14 73.9
Msa0537310 AT3G20120.2 21.875 224 173 1 134 357 20 241 5.39e-14 72.8
Msa0537310 AT3G20120.3 21.875 224 173 1 134 357 20 241 5.39e-14 72.8
Msa0537310 AT3G20120.1 21.875 224 173 1 134 357 20 241 5.39e-14 72.8
Msa0537310 AT3G20080.4 24.615 195 140 2 166 357 52 242 1.32e-13 71.6
Msa0537310 AT3G20080.5 24.615 195 140 2 166 357 52 242 1.32e-13 71.6
Msa0537310 AT3G20080.6 24.615 195 140 2 166 357 52 242 1.32e-13 71.6
Msa0537310 AT3G20080.3 24.615 195 140 2 166 357 52 242 1.32e-13 71.6
Msa0537310 AT1G64950.1 23.563 348 218 14 30 343 33 366 1.21e-12 69.3
Msa0537310 AT1G64930.1 22.965 344 224 11 30 343 33 365 1.52e-12 68.9
Msa0537310 AT5G04660.1 22.476 307 208 10 57 343 71 367 4.37e-12 67.8

Find 62 sgRNAs with CRISPR-Local

Find 466 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCCCTGAAACTTGGTTTA+AGG 0.144120 4_1:-15569857 Msa0537310:CDS
TAATGTTTCTACTACGTTTC+AGG 0.212203 4_1:+15569997 None:intergenic
TCATCTGCATGCTGTCTATT+TGG 0.212846 4_1:+15569198 None:intergenic
CTGATGAAGATTCCCAATTA+TGG 0.214691 4_1:+15569941 None:intergenic
CTGGCCTTAAACCAAGTTTC+AGG 0.221864 4_1:+15569853 None:intergenic
CCTAGAGGCCTACCCATAAT+TGG 0.250169 4_1:-15569954 Msa0537310:CDS
TGTACTTTCTTCATTACTCT+TGG 0.295950 4_1:+15559815 None:intergenic
GTTGACAGCTTTCTTTGTTT+CGG 0.323511 4_1:-15569337 Msa0537310:CDS
TCTGAAGAAACAACAATTGC+TGG 0.344958 4_1:+15569834 None:intergenic
GGAGGTTATTGATGAACATT+TGG 0.350779 4_1:-15569223 Msa0537310:CDS
GTACTTTCTTCATTACTCTT+GGG 0.357431 4_1:+15559816 None:intergenic
CACCTCAAACTTTCTTATAG+AGG 0.359634 4_1:+15569539 None:intergenic
GTAGGACTGCTTTCGGTAGA+AGG 0.361284 4_1:-15569422 Msa0537310:CDS
TGGTCCTATACCAACGGATA+TGG 0.370726 4_1:+15559560 None:intergenic
ACCTATAGCAACGGACAGTT+TGG 0.379300 4_1:+15559540 None:intergenic
ACAAAATTTCTCCTACTTGA+AGG 0.383649 4_1:-15559738 Msa0537310:CDS
CCAAGTTTCAGGGAAAATAT+TGG 0.383659 4_1:+15569864 None:intergenic
CAAACTCATGCAACATTCCT+TGG 0.386490 4_1:+15569367 None:intergenic
CATTATAAGATAATCTTTGC+TGG 0.387015 4_1:+15569745 None:intergenic
TTCCTCTATAAGAAAGTTTG+AGG 0.388511 4_1:-15569541 Msa0537310:CDS
CCACGTCAGCCACAGCAGTT+TGG 0.391484 4_1:-15559862 Msa0537310:CDS
ATAATTTGTAGGACTGCTTT+CGG 0.399669 4_1:-15569429 Msa0537310:CDS
TGATCAAAAGTAAGATCAAT+TGG 0.402322 4_1:+15569123 None:intergenic
TCTCGAGTACAATAATTTGT+AGG 0.406181 4_1:-15569440 Msa0537310:CDS
CACGTCAGCCACAGCAGTTT+GGG 0.414232 4_1:-15559861 Msa0537310:CDS
GGTTGGATTGATAAACTATC+TGG 0.423474 4_1:-15569297 Msa0537310:CDS
TGATGAAGATTCCCAATTAT+GGG 0.427796 4_1:+15569942 None:intergenic
TTCGGATTATATTCCATTCA+CGG 0.430086 4_1:-15569319 Msa0537310:CDS
ATTATATTCCATTCACGGGT+TGG 0.433388 4_1:-15569314 Msa0537310:CDS
CCAATTATGGGTAGGCCTCT+AGG 0.441400 4_1:+15569954 None:intergenic
AGAAAGTACAACAAGAGATT+AGG 0.449233 4_1:-15559802 Msa0537310:CDS
AGGAATGTTGCATGAGTTTG+AGG 0.457302 4_1:-15569364 Msa0537310:CDS
TGGCCTTAAACCAAGTTTCA+GGG 0.468826 4_1:+15569854 None:intergenic
TTATCAATCCAACCCGTGAA+TGG 0.473255 4_1:+15569306 None:intergenic
ACCAAACTGTCCGTTGCTAT+AGG 0.474435 4_1:-15559541 None:intergenic
CTAGAGGCCTACCCATAATT+GGG 0.476815 4_1:-15569953 Msa0537310:CDS
ACCTCCATATCCGTTGGTAT+AGG 0.480731 4_1:-15559564 Msa0537310:CDS
TCGGATTATATTCCATTCAC+GGG 0.488923 4_1:-15569318 Msa0537310:CDS
ATTAATGCACGTCATCCACC+TGG 0.506152 4_1:-15569978 Msa0537310:CDS
AATGTTCATCAATAACCTCC+TGG 0.531237 4_1:+15569226 None:intergenic
TTCAGGAAGAAGAGAAGTAA+TGG 0.544567 4_1:+15570014 None:intergenic
ATGGGTAGGCCTCTAGGCCC+AGG 0.551086 4_1:+15569960 None:intergenic
CTTTGCTGGCTATATAACAT+AGG 0.551502 4_1:+15569759 None:intergenic
GGTAGAAGGTACGAGGATGA+AGG 0.576370 4_1:-15569408 Msa0537310:CDS
CCAAACTGCTGTGGCTGACG+TGG 0.588361 4_1:+15559862 None:intergenic
ACGAGGATGAAGGAACTAAG+AGG 0.593024 4_1:-15569398 Msa0537310:CDS
CGTCATCCACCTGGGCCTAG+AGG 0.593029 4_1:-15569969 Msa0537310:CDS
ACAGCATGCAGATGATGAAG+AGG 0.598507 4_1:-15569190 Msa0537310:CDS
AACAAAGAAAGCTGTCAACA+TGG 0.599374 4_1:+15569341 None:intergenic
TAGTCAACCTCCATATCCGT+TGG 0.604954 4_1:-15559570 Msa0537310:CDS
TCACATTAAAGGAGTCCTCA+TGG 0.609600 4_1:-15569103 Msa0537310:intron
TCCTATACCAACGGATATGG+AGG 0.610907 4_1:+15559563 None:intergenic
AGTCATAGCCCAAACTGCTG+TGG 0.627252 4_1:+15559853 None:intergenic
GAAGATTCCCAATTATGGGT+AGG 0.632715 4_1:+15569946 None:intergenic
ACTAAGAGGAGTAAATTCCA+AGG 0.641947 4_1:-15569384 Msa0537310:CDS
GGTAGGCCTCTAGGCCCAGG+TGG 0.650389 4_1:+15569963 None:intergenic
AGAGAGAGAACCTATAGCAA+CGG 0.650685 4_1:+15559531 None:intergenic
ACAGTTTGGTCCTATACCAA+CGG 0.654916 4_1:+15559554 None:intergenic
TCTGTTCGAGACGCGCACGA+AGG 0.669075 4_1:+15569274 None:intergenic
TGCTTTCGGTAGAAGGTACG+AGG 0.677993 4_1:-15569415 Msa0537310:CDS
TTAATGCACGTCATCCACCT+GGG 0.687446 4_1:-15569977 Msa0537310:CDS
AAATTAGACACAAAACAAGG+AGG 0.764664 4_1:+15570039 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTAACATATATAAGA+GGG + chr4_1:15561205-15561224 None:intergenic 10.0%
!!! TATATTTTAACATATATAAG+AGG + chr4_1:15561206-15561225 None:intergenic 10.0%
!! AAATAAAAAGTAAATATTGA+GGG + chr4_1:15561341-15561360 None:intergenic 10.0%
!!! TTGTTTCTTATTTTATAATA+GGG + chr4_1:15561504-15561523 None:intergenic 10.0%
!!! CACATATTTTAATTTTATTT+TGG + chr4_1:15561528-15561547 None:intergenic 10.0%
!!! AATTAATTTTTCTTAAATGA+TGG - chr4_1:15561669-15561688 Msa0537310:intron 10.0%
!!! AGTATAAATTTTATTTTTCA+AGG - chr4_1:15561808-15561827 Msa0537310:intron 10.0%
!!! GTATAAATTTTATTTTTCAA+GGG - chr4_1:15561809-15561828 Msa0537310:intron 10.0%
!! TAATTTACTCAATATATTAT+GGG - chr4_1:15561902-15561921 Msa0537310:intron 10.0%
!!! ATACTTAAGTTTTAATATTT+TGG - chr4_1:15562355-15562374 Msa0537310:intron 10.0%
!!! TTTGTTTAAATTTTTGTTTT+TGG - chr4_1:15562822-15562841 Msa0537310:intron 10.0%
!!! GTTTTTGTTAATTTTTTTTT+AGG + chr4_1:15563237-15563256 None:intergenic 10.0%
!!! TTATATCCAATTTAATTTTT+TGG - chr4_1:15563542-15563561 Msa0537310:intron 10.0%
!!! TATATCCAATTTAATTTTTT+GGG - chr4_1:15563543-15563562 Msa0537310:intron 10.0%
!! TTTAAAAAAAATTAAGCAAA+TGG + chr4_1:15564814-15564833 None:intergenic 10.0%
!! TTGATTTACATATTAAAAAT+TGG - chr4_1:15565256-15565275 Msa0537310:intron 10.0%
!!! GAATTAGTTTAAATAATAAA+AGG - chr4_1:15565947-15565966 Msa0537310:intron 10.0%
!! ATGATTTAATAAAATTTGAT+TGG - chr4_1:15565972-15565991 Msa0537310:intron 10.0%
!! AAAATAAATTAAAATCAGTT+AGG - chr4_1:15566098-15566117 Msa0537310:intron 10.0%
!! AAATAAATTAAAATCAGTTA+GGG - chr4_1:15566099-15566118 Msa0537310:intron 10.0%
!!! TTTTTTTAATTATTTTACTG+AGG - chr4_1:15566211-15566230 Msa0537310:intron 10.0%
!!! TATTTTCAAAAAAAAAAAAC+CGG + chr4_1:15566948-15566967 None:intergenic 10.0%
!! GAATTAATTCAAATTATTTA+TGG + chr4_1:15566977-15566996 None:intergenic 10.0%
!! TATATTGTTTGATTATTTAT+AGG - chr4_1:15567791-15567810 Msa0537310:intron 10.0%
!!! ATAAATACCAATTTTTTTTA+GGG + chr4_1:15567840-15567859 None:intergenic 10.0%
!! TCAAAAAATTATTTATTTGA+TGG - chr4_1:15567964-15567983 Msa0537310:intron 10.0%
!! AATTTAATAAAATGAAAATC+AGG + chr4_1:15568017-15568036 None:intergenic 10.0%
!! ATAAATAAAATAAAAGAGAA+TGG - chr4_1:15569046-15569065 Msa0537310:intron 10.0%
!! TAAATAAAATAAAAGAGAAT+GGG - chr4_1:15569047-15569066 Msa0537310:intron 10.0%
!! TCAAAACTTTCAAAAATTTA+TGG - chr4_1:15559704-15559723 Msa0537310:intron 15.0%
!!! TTAAAATTACTCATCTTTTT+AGG + chr4_1:15560822-15560841 None:intergenic 15.0%
!!! TACTCTAATATATTTGTTTT+TGG + chr4_1:15561136-15561155 None:intergenic 15.0%
!!! TATTTTAACATATATAAGAG+GGG + chr4_1:15561204-15561223 None:intergenic 15.0%
!! GAAATAAAAAGTAAATATTG+AGG + chr4_1:15561342-15561361 None:intergenic 15.0%
!!! GTTGTTTCTTATTTTATAAT+AGG + chr4_1:15561505-15561524 None:intergenic 15.0%
!! TAGTGCATATTTAATTATTA+AGG - chr4_1:15561748-15561767 Msa0537310:intron 15.0%
!! AGTGCATATTTAATTATTAA+GGG - chr4_1:15561749-15561768 Msa0537310:intron 15.0%
!! GTAATTTACTCAATATATTA+TGG - chr4_1:15561901-15561920 Msa0537310:intron 15.0%
!!! ACCTAATATCTTAAAATTTT+GGG - chr4_1:15562647-15562666 Msa0537310:intron 15.0%
!!! CTTTAATAAGTATACTATTT+TGG - chr4_1:15563005-15563024 Msa0537310:intron 15.0%
!! TGATAAGGAAAAAAAATTAA+GGG + chr4_1:15563126-15563145 None:intergenic 15.0%
!! ATGATAAGGAAAAAAAATTA+AGG + chr4_1:15563127-15563146 None:intergenic 15.0%
!! TAAAAAATGTTCCATTAAAA+CGG + chr4_1:15563575-15563594 None:intergenic 15.0%
!!! GAATTTGAAATAATAGAAAT+TGG + chr4_1:15563599-15563618 None:intergenic 15.0%
!!! TTTAATTGTGTCTAATTTTT+TGG - chr4_1:15563727-15563746 Msa0537310:intron 15.0%
!! AAAGAATTTAAATGAAAATG+TGG - chr4_1:15564136-15564155 Msa0537310:intron 15.0%
!!! TCTTAATGAGTTTAATTTTA+TGG - chr4_1:15564245-15564264 Msa0537310:intron 15.0%
!! AAATTAAAACAAAGGATATA+TGG - chr4_1:15565375-15565394 Msa0537310:intron 15.0%
!!! GTGAGATTTTTTATATTATT+TGG - chr4_1:15565527-15565546 Msa0537310:intron 15.0%
!! AATAAATTAAAATCAGTTAG+GGG - chr4_1:15566100-15566119 Msa0537310:intron 15.0%
!!! TTATTTTTTTATAAGCAAAG+AGG + chr4_1:15566372-15566391 None:intergenic 15.0%
!!! ATGTTTTAAAATAGAGATTA+CGG + chr4_1:15566553-15566572 None:intergenic 15.0%
!! TATTTGAGAAAAGAAAAAAA+TGG - chr4_1:15567049-15567068 Msa0537310:intron 15.0%
!!! TTAATTACCTTATTTATAAG+CGG + chr4_1:15567327-15567346 None:intergenic 15.0%
!!! CAAATGTACTTTTAATTTTT+AGG - chr4_1:15567460-15567479 Msa0537310:intron 15.0%
!! AATTTGATTCTATTTAATGA+TGG + chr4_1:15567658-15567677 None:intergenic 15.0%
!! TTTGATTATTTATAGGAAAA+AGG - chr4_1:15567798-15567817 Msa0537310:intron 15.0%
!! ATTTATTCCCTAAAAAAAAT+TGG - chr4_1:15567830-15567849 Msa0537310:intron 15.0%
!!! CATAAATACCAATTTTTTTT+AGG + chr4_1:15567841-15567860 None:intergenic 15.0%
!! AATAAAACATAAATGATTAC+TGG - chr4_1:15568350-15568369 Msa0537310:intron 15.0%
!! ATAAAACATAAATGATTACT+GGG - chr4_1:15568351-15568370 Msa0537310:intron 15.0%
!!! TCATTTTTCTTTAACTAAAA+GGG + chr4_1:15568425-15568444 None:intergenic 15.0%
!!! TTCATTTTTCTTTAACTAAA+AGG + chr4_1:15568426-15568445 None:intergenic 15.0%
!!! GCATCTTTAATTTATTTTTT+CGG + chr4_1:15568456-15568475 None:intergenic 15.0%
!!! AAAAAAGAAAATCGTTTTTA+AGG + chr4_1:15568478-15568497 None:intergenic 15.0%
!! GAAAAATAAATAGATAGAAA+AGG - chr4_1:15568745-15568764 Msa0537310:intron 15.0%
!! AGAGATTAAAATAAAACAAA+AGG - chr4_1:15568780-15568799 Msa0537310:intron 15.0%
!! GAGATTAAAATAAAACAAAA+GGG - chr4_1:15568781-15568800 Msa0537310:intron 15.0%
!! AAATAAAATAAAAGAGAATG+GGG - chr4_1:15569048-15569067 Msa0537310:intron 15.0%
!! AAATCAAATTGTCTATATAT+AGG - chr4_1:15569122-15569141 Msa0537310:CDS 15.0%
!! TTTATATAAAATGAGAATAG+TGG + chr4_1:15569377-15569396 None:intergenic 15.0%
!!! TTTCTCAATATAGTGATTTT+TGG - chr4_1:15559885-15559904 Msa0537310:CDS 20.0%
!!! CTTGATTTATTTTTCCAATT+TGG - chr4_1:15560520-15560539 Msa0537310:intron 20.0%
!! AAACTAAAACAAAACCAAAT+TGG + chr4_1:15560537-15560556 None:intergenic 20.0%
!!! ATTTGGTTTTGTTTTAGTTT+TGG - chr4_1:15560537-15560556 Msa0537310:intron 20.0%
!!! AAAAGATGAGTAATTTTAAG+TGG - chr4_1:15560823-15560842 Msa0537310:intron 20.0%
!!! AAAGATGAGTAATTTTAAGT+GGG - chr4_1:15560824-15560843 Msa0537310:intron 20.0%
!!! CGCAAACAATAATATAATTT+TGG + chr4_1:15561030-15561049 None:intergenic 20.0%
!!! TAATATGTTTTGAATAAGAG+AGG + chr4_1:15561238-15561257 None:intergenic 20.0%
!!! TGTAAATTTTAACATAAGAG+GGG + chr4_1:15561311-15561330 None:intergenic 20.0%
!!! GTGTAAATTTTAACATAAGA+GGG + chr4_1:15561312-15561331 None:intergenic 20.0%
!!! AGTGTAAATTTTAACATAAG+AGG + chr4_1:15561313-15561332 None:intergenic 20.0%
!! CATATTTAATTATTAAGGGA+GGG - chr4_1:15561753-15561772 Msa0537310:intron 20.0%
!!! TGTAATTCTAGAATCTTATA+AGG - chr4_1:15561779-15561798 Msa0537310:intron 20.0%
!!! GTAATTCTAGAATCTTATAA+GGG - chr4_1:15561780-15561799 Msa0537310:intron 20.0%
!!! TAAATTTTATTTTTCAAGGG+AGG - chr4_1:15561812-15561831 Msa0537310:intron 20.0%
!!! AAATTTTATTTTTCAAGGGA+GGG - chr4_1:15561813-15561832 Msa0537310:intron 20.0%
!!! TGTATATTTTAACATAAGAG+AGG - chr4_1:15561839-15561858 Msa0537310:intron 20.0%
!! TCAACATATCATATTCTAAA+TGG + chr4_1:15561941-15561960 None:intergenic 20.0%
!!! TTTTGTTAAACATACTAGTA+TGG - chr4_1:15562221-15562240 Msa0537310:intron 20.0%
!!! TAATATTTTGGATGAAAATG+TGG - chr4_1:15562367-15562386 Msa0537310:intron 20.0%
!!! TTTTAAGATATTAGGTGTAT+GGG + chr4_1:15562643-15562662 None:intergenic 20.0%
!!! ATTTTAAGATATTAGGTGTA+TGG + chr4_1:15562644-15562663 None:intergenic 20.0%
!!! CACCTAATATCTTAAAATTT+TGG - chr4_1:15562646-15562665 Msa0537310:intron 20.0%
!!! ACCCAAAATTTTAAGATATT+AGG + chr4_1:15562651-15562670 None:intergenic 20.0%
!!! TTTTACAATTTGAATTGATG+TGG - chr4_1:15562975-15562994 Msa0537310:intron 20.0%
!!! TAATTTTACAGATTTGTTGA+AGG + chr4_1:15563058-15563077 None:intergenic 20.0%
!! TAAAAAGAAATTAGAACATG+AGG + chr4_1:15563155-15563174 None:intergenic 20.0%
!!! TGACTTTATTTGACTTTATT+TGG - chr4_1:15563313-15563332 Msa0537310:intron 20.0%
!! TCAATATAACTAATGTCTTA+AGG - chr4_1:15563375-15563394 Msa0537310:intron 20.0%
!! TTATGTGACATAGTTAAATA+AGG + chr4_1:15563986-15564005 None:intergenic 20.0%
!!! TAATTTTATGAGTTTGTTGA+AGG + chr4_1:15564299-15564318 None:intergenic 20.0%
!!! TGTTGTCAATATCATTTTTT+AGG - chr4_1:15564696-15564715 Msa0537310:intron 20.0%
!!! GTTGTCAATATCATTTTTTA+GGG - chr4_1:15564697-15564716 Msa0537310:intron 20.0%
!!! GTACTATGCTATAATTTTAT+TGG - chr4_1:15565278-15565297 Msa0537310:intron 20.0%
!!! CCTTTGTTTTAATTTTTAAC+TGG + chr4_1:15565370-15565389 None:intergenic 20.0%
!! CCAGTTAAAAATTAAAACAA+AGG - chr4_1:15565367-15565386 Msa0537310:intron 20.0%
!!! ATCATTGATTAAGTACTATT+AGG + chr4_1:15565447-15565466 None:intergenic 20.0%
!!! TAATACGTGATTTCTTTTAT+GGG + chr4_1:15565573-15565592 None:intergenic 20.0%
!!! ATAATACGTGATTTCTTTTA+TGG + chr4_1:15565574-15565593 None:intergenic 20.0%
!! TAAAAGAAATCACGTATTAT+AGG - chr4_1:15565574-15565593 Msa0537310:intron 20.0%
!! CAATTCACAATAAATGAAAA+TGG + chr4_1:15565606-15565625 None:intergenic 20.0%
!! TGTTCAATAATGTACAAAAT+AGG - chr4_1:15565822-15565841 Msa0537310:intron 20.0%
!! GAATTTCTCTTATACATATT+AGG + chr4_1:15566002-15566021 None:intergenic 20.0%
!!! AATTATTTTAATGAGGTGTT+GGG + chr4_1:15566075-15566094 None:intergenic 20.0%
!!! TAATTATTTTAATGAGGTGT+TGG + chr4_1:15566076-15566095 None:intergenic 20.0%
!! ATAAATTAAAATCAGTTAGG+GGG - chr4_1:15566101-15566120 Msa0537310:intron 20.0%
!!! TGTTTTAAAATAGAGATTAC+GGG + chr4_1:15566552-15566571 None:intergenic 20.0%
!! GTCTAATTCAACATATTTAT+TGG + chr4_1:15566802-15566821 None:intergenic 20.0%
!!! GAATAATCTGACATAATTTT+AGG - chr4_1:15566920-15566939 Msa0537310:intron 20.0%
!!! CAATTTTATAAGCAATTCAA+TGG - chr4_1:15566996-15567015 Msa0537310:intron 20.0%
!! AAAATGGAAATTAAAGATCA+AGG - chr4_1:15567065-15567084 Msa0537310:intron 20.0%
!! TCTACAACAAAATTTACATT+TGG - chr4_1:15567176-15567195 Msa0537310:intron 20.0%
!!! AAAAAATGATGATAAGTTGA+TGG - chr4_1:15567227-15567246 Msa0537310:intron 20.0%
!! ACTTATTAATCATGTTTCAA+TGG + chr4_1:15567256-15567275 None:intergenic 20.0%
!! ATGATAAAAAAAATTAACCG+AGG - chr4_1:15567559-15567578 Msa0537310:intron 20.0%
!!! ATTTTGTATTTTGTTTGTGT+TGG + chr4_1:15567607-15567626 None:intergenic 20.0%
!!! TCTATTTAATGATGGTTTTT+TGG + chr4_1:15567650-15567669 None:intergenic 20.0%
!! TTTCAAAAATGATATTGCAA+AGG + chr4_1:15567692-15567711 None:intergenic 20.0%
!!! GCAATATCATTTTTGAAAAA+AGG - chr4_1:15567694-15567713 Msa0537310:intron 20.0%
!!! TCATTTTTGAAAAAAGGAAT+TGG - chr4_1:15567700-15567719 Msa0537310:intron 20.0%
!!! AAAATGAAAATCAGGTATTT+TGG + chr4_1:15568009-15568028 None:intergenic 20.0%
!!! GTTTTTTTTTGTAGAAATGA+TGG - chr4_1:15568105-15568124 Msa0537310:intron 20.0%
!! ATTATGGAAAGAGTTAAATA+TGG - chr4_1:15568139-15568158 Msa0537310:intron 20.0%
!! ATGCATTGAATACAAAAATA+TGG - chr4_1:15568209-15568228 Msa0537310:intron 20.0%
!!! TAAAACGCACTTAAAATTTT+AGG - chr4_1:15568386-15568405 Msa0537310:intron 20.0%
!! ATCAATCAAAAAATATATCG+AGG + chr4_1:15568817-15568836 None:intergenic 20.0%
!!! ATAAGTTTTTTGTTTTTGAC+CGG + chr4_1:15568894-15568913 None:intergenic 20.0%
!!! GAAAGCAATGATTTTTTTTA+TGG - chr4_1:15569073-15569092 Msa0537310:intron 20.0%
!!! ATTTTTTTTATGGAAGAAAG+AGG - chr4_1:15569083-15569102 Msa0537310:intron 20.0%
!! TGAAAAAACATTAAATGAGA+TGG - chr4_1:15569259-15569278 Msa0537310:CDS 20.0%
!!! CAAATAAGAATATGATTTTG+TGG - chr4_1:15569422-15569441 Msa0537310:CDS 20.0%
! GAAAAATTAGACACAAAACA+AGG + chr4_1:15559559-15559578 None:intergenic 25.0%
! CATTATAAGATAATCTTTGC+TGG + chr4_1:15559850-15559869 None:intergenic 25.0%
!! AACACAAAGTTTTCTTATAG+AGG + chr4_1:15559996-15560015 None:intergenic 25.0%
! TGATCAAAAGTAAGATCAAT+TGG + chr4_1:15560472-15560491 None:intergenic 25.0%
!!! CTTACTTTTGATCACATTAA+AGG - chr4_1:15560478-15560497 Msa0537310:intron 25.0%
! ATGCTCTAGTGTAAAATTAT+AGG - chr4_1:15560591-15560610 Msa0537310:intron 25.0%
! TGGAAAAACGAAAAACTTAA+AGG + chr4_1:15560635-15560654 None:intergenic 25.0%
!! GAAACTTAAAGTACTTGTTT+GGG + chr4_1:15560684-15560703 None:intergenic 25.0%
!! TGAAACTTAAAGTACTTGTT+TGG + chr4_1:15560685-15560704 None:intergenic 25.0%
! CATATTGTAGATAGCATAAT+TGG + chr4_1:15560898-15560917 None:intergenic 25.0%
! GAAACGATTCAAAAACTTAA+AGG - chr4_1:15560926-15560945 Msa0537310:intron 25.0%
!! TTTTGGTCAAATGCAATTAA+AGG + chr4_1:15561013-15561032 None:intergenic 25.0%
! ACAAATAAATGTATCTCTTG+TGG - chr4_1:15561080-15561099 Msa0537310:intron 25.0%
!!! TGTAATTGAAGCATCTTTTA+GGG + chr4_1:15561174-15561193 None:intergenic 25.0%
! TCGAAAAAAAATAGTATTGC+AGG - chr4_1:15561398-15561417 Msa0537310:intron 25.0%
! GCATATTTAATTATTAAGGG+AGG - chr4_1:15561752-15561771 Msa0537310:intron 25.0%
!!! ATATTTTAACATAAGAGAGG+AGG - chr4_1:15561842-15561861 Msa0537310:intron 25.0%
!!! TATTTTAACATAAGAGAGGA+GGG - chr4_1:15561843-15561862 Msa0537310:intron 25.0%
! ACATATCATATTCTAAATGG+AGG + chr4_1:15561938-15561957 None:intergenic 25.0%
! CTACACAATTGAATCATATT+AGG + chr4_1:15562714-15562733 None:intergenic 25.0%
!! AACTAATGTCTTAAGGTTTT+AGG - chr4_1:15563382-15563401 Msa0537310:intron 25.0%
!!! TGATTTTATGAGTTTGTTGA+AGG + chr4_1:15563781-15563800 None:intergenic 25.0%
! CTTTAGATTTAGTGAATTGT+TGG + chr4_1:15563804-15563823 None:intergenic 25.0%
! ATGTCACATAATTAAAGATG+CGG - chr4_1:15563995-15564014 Msa0537310:intron 25.0%
! TTCGAGTAAAACTTATACAA+TGG - chr4_1:15564057-15564076 Msa0537310:intron 25.0%
! CAACAAACTCATAAAATTAC+CGG - chr4_1:15564300-15564319 Msa0537310:intron 25.0%
! ACTTAAGACATTAGCTATAT+TGG + chr4_1:15564661-15564680 None:intergenic 25.0%
! ATGGGTTTGATCATTATATT+TGG + chr4_1:15564733-15564752 None:intergenic 25.0%
!!! TTGGTGTAATGACATTTTTT+TGG - chr4_1:15565060-15565079 Msa0537310:intron 25.0%
! AAGAAACACATACTATATAC+AGG - chr4_1:15565129-15565148 Msa0537310:intron 25.0%
!!! GCGATTCTAAAATGTTTAAT+TGG - chr4_1:15565197-15565216 Msa0537310:intron 25.0%
!!! GATATATGGTTTGATTTGAT+TGG - chr4_1:15565389-15565408 Msa0537310:intron 25.0%
! ATTGATTAAGTACTATTAGG+TGG + chr4_1:15565444-15565463 None:intergenic 25.0%
!! TTAATTTGACGTGATATACA+TGG + chr4_1:15565506-15565525 None:intergenic 25.0%
! AAAAATGACACATCTTACAT+TGG - chr4_1:15565925-15565944 Msa0537310:intron 25.0%
!!! TAATTATTTTACTGAGGTGT+TGG - chr4_1:15566217-15566236 Msa0537310:intron 25.0%
!! TTTTTATAAGCAAAGAGGTA+GGG + chr4_1:15566367-15566386 None:intergenic 25.0%
!!! TTTTTTATAAGCAAAGAGGT+AGG + chr4_1:15566368-15566387 None:intergenic 25.0%
! TGTACTCTTGAAATATGAAA+AGG - chr4_1:15566646-15566665 Msa0537310:intron 25.0%
!!! TGTTTTTTCCATGATATTAG+AGG + chr4_1:15566766-15566785 None:intergenic 25.0%
!! CATTTAACATTTTGCTTGTT+AGG - chr4_1:15567140-15567159 Msa0537310:intron 25.0%
!! ATAGGTTGAATTGATAACTT+TGG + chr4_1:15568560-15568579 None:intergenic 25.0%
! CAAGTATAAAGTAGGAAAAA+TGG - chr4_1:15568627-15568646 Msa0537310:intron 25.0%
! ATGTCATAATCAACTTTGAT+TGG - chr4_1:15569152-15569171 Msa0537310:CDS 25.0%
!!! GTCATATGATTCATTTTGAT+TGG - chr4_1:15569193-15569212 Msa0537310:CDS 25.0%
!!! AAGTAAAGATCCATTTTGAT+TGG - chr4_1:15569232-15569251 Msa0537310:CDS 25.0%
!! TTTTCATCAACCAATCAAAA+TGG + chr4_1:15569245-15569264 None:intergenic 25.0%
!! CGAATCATAATAAGATTTTG+TGG - chr4_1:15569518-15569537 Msa0537310:CDS 25.0%
!! AGAGTACTTAAACGAAATTA+GGG + chr4_1:15569593-15569612 None:intergenic 25.0%
!!! AAGAGTACTTAAACGAAATT+AGG + chr4_1:15569594-15569613 None:intergenic 25.0%
!!! ATTGTGTTCGTTGATAATTT+AGG - chr4_1:15569625-15569644 Msa0537310:intron 25.0%
!!! TACTCTTGGGTTTTTTATTA+AGG + chr4_1:15569766-15569785 None:intergenic 25.0%
! GTTGACTAAAGCTATTTAAT+AGG + chr4_1:15570010-15570029 None:intergenic 25.0%
AAATTAGACACAAAACAAGG+AGG + chr4_1:15559556-15559575 None:intergenic 30.0%
! TAATGTTTCTACTACGTTTC+AGG + chr4_1:15559598-15559617 None:intergenic 30.0%
TGATGAAGATTCCCAATTAT+GGG + chr4_1:15559653-15559672 None:intergenic 30.0%
!! ATAGTGATTTTTGGAGAGAT+AGG - chr4_1:15559894-15559913 Msa0537310:intron 30.0%
TTCCTCTATAAGAAAGTTTG+AGG - chr4_1:15560051-15560070 Msa0537310:intron 30.0%
! TCTCGAGTACAATAATTTGT+AGG - chr4_1:15560152-15560171 Msa0537310:intron 30.0%
! ATAATTTGTAGGACTGCTTT+CGG - chr4_1:15560163-15560182 Msa0537310:intron 30.0%
TTCGGATTATATTCCATTCA+CGG - chr4_1:15560273-15560292 Msa0537310:intron 30.0%
TATAGGTCAAATGCATCTAA+AGG - chr4_1:15560608-15560627 Msa0537310:intron 30.0%
!! GTTTTTCGTTTTTCCAAAAG+TGG - chr4_1:15560639-15560658 Msa0537310:intron 30.0%
!!! TTGGGACTTTTGAAACTTAA+AGG + chr4_1:15560955-15560974 None:intergenic 30.0%
! AAAACGAAAAGGACTTGTTT+GGG + chr4_1:15560713-15560732 None:intergenic 30.0%
! AAAAACGAAAAGGACTTGTT+TGG + chr4_1:15560714-15560733 None:intergenic 30.0%
GAAACGATTCAAAAACGAAA+AGG + chr4_1:15560724-15560743 None:intergenic 30.0%
! TTTCAAACAAGTCCTTTTAG+AGG - chr4_1:15560740-15560759 Msa0537310:intron 30.0%
!! ATTACTCATCTTTTTAGGCA+TGG + chr4_1:15560817-15560836 None:intergenic 30.0%
!! AGTAATTTTAAGTGGGTCTT+AGG - chr4_1:15560831-15560850 Msa0537310:intron 30.0%
AAAAACTTAAAGGACCACTT+TGG - chr4_1:15560936-15560955 Msa0537310:intron 30.0%
AAAACTTAAAGGACCACTTT+GGG - chr4_1:15560937-15560956 Msa0537310:intron 30.0%
!!! TTGGGACTTTTGAAACTTAA+AGG - chr4_1:15560955-15560974 Msa0537310:intron 30.0%
GGAAAAGACGAAAAACTTAA+AGG - chr4_1:15560986-15561005 Msa0537310:intron 30.0%
!! GTAATTGAAGCATCTTTTAG+GGG + chr4_1:15561173-15561192 None:intergenic 30.0%
!! GTGTAATTGAAGCATCTTTT+AGG + chr4_1:15561175-15561194 None:intergenic 30.0%
TTAACATATATAAGAGGGGA+GGG + chr4_1:15561200-15561219 None:intergenic 30.0%
TTTAACATATATAAGAGGGG+AGG + chr4_1:15561201-15561220 None:intergenic 30.0%
!! TATGTTTTGAATAAGAGAGG+AGG + chr4_1:15561235-15561254 None:intergenic 30.0%
!! AATTTTAACATAAGAGGGGA+GGG + chr4_1:15561307-15561326 None:intergenic 30.0%
!! AAATTTTAACATAAGAGGGG+AGG + chr4_1:15561308-15561327 None:intergenic 30.0%
!! ATTCTAGAATCTTATAAGGG+AGG - chr4_1:15561783-15561802 Msa0537310:intron 30.0%
!! TTCTAGAATCTTATAAGGGA+GGG - chr4_1:15561784-15561803 Msa0537310:intron 30.0%
!! ATTTTAACATAAGAGAGGAG+GGG - chr4_1:15561844-15561863 Msa0537310:intron 30.0%
TGTAATTCAAGCATCTTTGA+GGG - chr4_1:15561869-15561888 Msa0537310:intron 30.0%
TCATATTCTAAATGGAGGTT+TGG + chr4_1:15561933-15561952 None:intergenic 30.0%
TTTCGTCATACTTAAAAGAG+AGG - chr4_1:15562270-15562289 Msa0537310:intron 30.0%
GTTAAAATTCCAGTGTATGT+AGG - chr4_1:15562585-15562604 Msa0537310:intron 30.0%
! TTGGGTTGCATAATCATATT+AGG + chr4_1:15562747-15562766 None:intergenic 30.0%
!! ATTGCTTCACTTTTGTTCTT+TGG - chr4_1:15562892-15562911 Msa0537310:intron 30.0%
TATAGGAAATAGTGAGTTGT+TGG + chr4_1:15563081-15563100 None:intergenic 30.0%
AACATGAGGTAGAAATGATA+AGG + chr4_1:15563141-15563160 None:intergenic 30.0%
! ATGGATTGTATCATCACATT+AGG + chr4_1:15563449-15563468 None:intergenic 30.0%
TGGCACCCAAAAAATTAAAT+TGG + chr4_1:15563551-15563570 None:intergenic 30.0%
AAATGTTCCATTAAAACGGA+TGG + chr4_1:15563571-15563590 None:intergenic 30.0%
! AACACATCAGCGTTTTTATT+TGG + chr4_1:15563651-15563670 None:intergenic 30.0%
TGAAGGAGTTGAAGATTTAT+GGG + chr4_1:15563764-15563783 None:intergenic 30.0%
TTGAAGGAGTTGAAGATTTA+TGG + chr4_1:15563765-15563784 None:intergenic 30.0%
TTTGATTGTAATCGAATGGA+GGG + chr4_1:15563930-15563949 None:intergenic 30.0%
ATTTGATTGTAATCGAATGG+AGG + chr4_1:15563931-15563950 None:intergenic 30.0%
GTGATTTGATTGTAATCGAA+TGG + chr4_1:15563934-15563953 None:intergenic 30.0%
ATTCTTTAGATCCATGTATG+TGG + chr4_1:15564123-15564142 None:intergenic 30.0%
GAAGACGAAATAAATGATGA+GGG + chr4_1:15564340-15564359 None:intergenic 30.0%
AGAAGACGAAATAAATGATG+AGG + chr4_1:15564341-15564360 None:intergenic 30.0%
GAAGAGAAAGTAAATGATGA+GGG + chr4_1:15564390-15564409 None:intergenic 30.0%
AGAACCATATCTAGATAGAA+CGG - chr4_1:15564933-15564952 Msa0537310:intron 30.0%
!! TAACTTCTCTGAGATCAATT+CGG + chr4_1:15565033-15565052 None:intergenic 30.0%
ATTGATCTCAGAGAAGTTAT+CGG - chr4_1:15565034-15565053 Msa0537310:intron 30.0%
!!! GTGTTGGATTTTAATTGGTT+GGG - chr4_1:15566233-15566252 Msa0537310:intron 30.0%
TATTTGAGTCAGATATTGAG+AGG + chr4_1:15566502-15566521 None:intergenic 30.0%
!!! TCTGACATAATTTTAGGATC+CGG - chr4_1:15566926-15566945 Msa0537310:intron 30.0%
TGTTATTGTTGAAAGTTGAG+AGG - chr4_1:15567112-15567131 Msa0537310:intron 30.0%
!! TTAACATTTTGCTTGTTAGG+TGG - chr4_1:15567143-15567162 Msa0537310:intron 30.0%
! TTTGGCTTACTTCATTTGAT+TGG - chr4_1:15567194-15567213 Msa0537310:intron 30.0%
CAACTTTCCGCTTATAAATA+AGG - chr4_1:15567317-15567336 Msa0537310:intron 30.0%
!!! CATGCGTAAACTTTTTTATG+AGG - chr4_1:15567399-15567418 Msa0537310:intron 30.0%
AAGTAATAATGCACGTTTAG+TGG - chr4_1:15567764-15567783 Msa0537310:intron 30.0%
TAGTAAAGTTCATTTCTCCT+AGG + chr4_1:15567903-15567922 None:intergenic 30.0%
!!! TCTGAATTTTAGTTACTTCG+CGG + chr4_1:15567939-15567958 None:intergenic 30.0%
GAAAGAGTTAAATATGGAGT+CGG - chr4_1:15568145-15568164 Msa0537310:intron 30.0%
!!! CCAAATGATCTTTTTTTGAG+TGG + chr4_1:15568526-15568545 None:intergenic 30.0%
CCACTCAAAAAAAGATCATT+TGG - chr4_1:15568523-15568542 Msa0537310:intron 30.0%
! GCATCTCATTTTCACAAAAT+AGG + chr4_1:15568578-15568597 None:intergenic 30.0%
TTTATACTTGAGATGGAAAC+CGG + chr4_1:15568617-15568636 None:intergenic 30.0%
TTCCATCTCAAGTATAAAGT+AGG - chr4_1:15568619-15568638 Msa0537310:intron 30.0%
TTCCTACTTTATACTTGAGA+TGG + chr4_1:15568624-15568643 None:intergenic 30.0%
GTACTTTCTTCATTACTCTT+GGG + chr4_1:15569779-15569798 None:intergenic 30.0%
TGTACTTTCTTCATTACTCT+TGG + chr4_1:15569780-15569799 None:intergenic 30.0%
! AGAAAGTACAACAAGAGATT+AGG - chr4_1:15569790-15569809 Msa0537310:CDS 30.0%
ACAAAATTTCTCCTACTTGA+AGG - chr4_1:15569854-15569873 Msa0537310:CDS 30.0%
TTCAGGAAGAAGAGAAGTAA+TGG + chr4_1:15559581-15559600 None:intergenic 35.0%
CTGATGAAGATTCCCAATTA+TGG + chr4_1:15559654-15559673 None:intergenic 35.0%
CCAAGTTTCAGGGAAAATAT+TGG + chr4_1:15559731-15559750 None:intergenic 35.0%
! CCAATATTTTCCCTGAAACT+TGG - chr4_1:15559728-15559747 Msa0537310:intron 35.0%
TTTCCCTGAAACTTGGTTTA+AGG - chr4_1:15559735-15559754 Msa0537310:intron 35.0%
TCTGAAGAAACAACAATTGC+TGG + chr4_1:15559761-15559780 None:intergenic 35.0%
! CTTTGCTGGCTATATAACAT+AGG + chr4_1:15559836-15559855 None:intergenic 35.0%
!! TGATTTTTGGAGAGATAGGT+GGG - chr4_1:15559898-15559917 Msa0537310:intron 35.0%
! CTAGCACTCACTCTTTTATT+GGG + chr4_1:15559940-15559959 None:intergenic 35.0%
! TCTAGCACTCACTCTTTTAT+TGG + chr4_1:15559941-15559960 None:intergenic 35.0%
CACCTCAAACTTTCTTATAG+AGG + chr4_1:15560056-15560075 None:intergenic 35.0%
ACTAAGAGGAGTAAATTCCA+AGG - chr4_1:15560208-15560227 Msa0537310:intron 35.0%
AACAAAGAAAGCTGTCAACA+TGG + chr4_1:15560254-15560273 None:intergenic 35.0%
! GTTGACAGCTTTCTTTGTTT+CGG - chr4_1:15560255-15560274 Msa0537310:intron 35.0%
TCGGATTATATTCCATTCAC+GGG - chr4_1:15560274-15560293 Msa0537310:intron 35.0%
ATTATATTCCATTCACGGGT+TGG - chr4_1:15560278-15560297 Msa0537310:intron 35.0%
GGTTGGATTGATAAACTATC+TGG - chr4_1:15560295-15560314 Msa0537310:intron 35.0%
!! CGAACAGAATTTTAAGGAGA+TGG - chr4_1:15560333-15560352 Msa0537310:intron 35.0%
AATGTTCATCAATAACCTCC+TGG + chr4_1:15560369-15560388 None:intergenic 35.0%
GGAGGTTATTGATGAACATT+TGG - chr4_1:15560369-15560388 Msa0537310:intron 35.0%
AATCAAGACAACATACCATG+AGG + chr4_1:15560507-15560526 None:intergenic 35.0%
!! CTTGCATGAAGTTGATGTAA+TGG + chr4_1:15560570-15560589 None:intergenic 35.0%
! GAAACTTAAAGGACCACTTT+TGG + chr4_1:15560966-15560985 None:intergenic 35.0%
!! ATCTTTTTAGGCATGGCAAA+TGG + chr4_1:15560810-15560829 None:intergenic 35.0%
TGCTTCTTTGAACTCATCTT+TGG + chr4_1:15560871-15560890 None:intergenic 35.0%
AAGTTTCAAAAGTCCCAAAG+TGG + chr4_1:15560953-15560972 None:intergenic 35.0%
TGAAACTTAAAGGACCACTT+TGG - chr4_1:15560965-15560984 Msa0537310:intron 35.0%
! GTTTTTCGTCTTTTCCAAAG+TGG + chr4_1:15560982-15561001 None:intergenic 35.0%
TAACATATATAAGAGGGGAG+GGG + chr4_1:15561199-15561218 None:intergenic 35.0%
TGTAATTCAACCTTCGCTTA+GGG + chr4_1:15561281-15561300 None:intergenic 35.0%
ATGTAATTCAACCTTCGCTT+AGG + chr4_1:15561282-15561301 None:intergenic 35.0%
!! ATTTTAACATAAGAGGGGAG+GGG + chr4_1:15561306-15561325 None:intergenic 35.0%
! TCTAGAATCTTATAAGGGAG+GGG - chr4_1:15561785-15561804 Msa0537310:intron 35.0%
GTGTAATTCAAGCATCTTTG+AGG - chr4_1:15561868-15561887 Msa0537310:intron 35.0%
TGGTATTATTCTCACATGTG+TGG - chr4_1:15562387-15562406 Msa0537310:intron 35.0%
!! CTTCACTTTTGTTCTTTGGT+AGG - chr4_1:15562896-15562915 Msa0537310:intron 35.0%
!! TACAGATTTGTTGAAGGAGT+CGG + chr4_1:15563052-15563071 None:intergenic 35.0%
!! AAAAAAAGGTGAGTTGGTAG+CGG + chr4_1:15563274-15563293 None:intergenic 35.0%
CTTGGTAAAAAAAGGTGAGT+TGG + chr4_1:15563280-15563299 None:intergenic 35.0%
AGGCACAACTTGGTAAAAAA+AGG + chr4_1:15563288-15563307 None:intergenic 35.0%
!!! TTTTTTACCAAGTTGTGCCT+CGG - chr4_1:15563288-15563307 Msa0537310:intron 35.0%
GTGATGATACAATCCATTGT+AGG - chr4_1:15563452-15563471 Msa0537310:intron 35.0%
ACTCTGAACATTACGATGAA+CGG - chr4_1:15563485-15563504 Msa0537310:intron 35.0%
AAAGCACAACATGGTCAAAA+AGG + chr4_1:15563956-15563975 None:intergenic 35.0%
AGTGAGATTATCCACATACA+TGG - chr4_1:15564109-15564128 Msa0537310:intron 35.0%
GGAAGAGAAAGTAAATGATG+AGG + chr4_1:15564391-15564410 None:intergenic 35.0%
! TTTGCTCTTTTCTTTCACGA+GGG + chr4_1:15564428-15564447 None:intergenic 35.0%
! TTTTGCTCTTTTCTTTCACG+AGG + chr4_1:15564429-15564448 None:intergenic 35.0%
GAAGACGAAAGAAATGATGA+GGG + chr4_1:15564475-15564494 None:intergenic 35.0%
TGAAGACGAAAGAAATGATG+AGG + chr4_1:15564476-15564495 None:intergenic 35.0%
! AATAAGGTGTCTGTACAACA+TGG + chr4_1:15564509-15564528 None:intergenic 35.0%
TGTTGTACAGACACCTTATT+CGG - chr4_1:15564509-15564528 Msa0537310:intron 35.0%
TATGGTGAAATAGCCGAATA+AGG + chr4_1:15564525-15564544 None:intergenic 35.0%
ACTGAGAGTCTCACAATTAA+GGG - chr4_1:15564553-15564572 Msa0537310:intron 35.0%
GTTATAAGAGAGTCTGCAAT+GGG + chr4_1:15564751-15564770 None:intergenic 35.0%
AGTTATAAGAGAGTCTGCAA+TGG + chr4_1:15564752-15564771 None:intergenic 35.0%
CTCTGAACTTTATGATGAAC+TGG - chr4_1:15564770-15564789 Msa0537310:intron 35.0%
CTATCTAGATATGGTTCTCA+TGG + chr4_1:15564931-15564950 None:intergenic 35.0%
ACATCCGTTCTATCTAGATA+TGG + chr4_1:15564940-15564959 None:intergenic 35.0%
TGGAGTTTGACAACATTCTT+TGG - chr4_1:15565080-15565099 Msa0537310:intron 35.0%
TAATTGGTTGGGTGTAAGAA+TGG + chr4_1:15566244-15566263 None:intergenic 35.0%
!!! GTGTTGGGTTTTAATTGGTT+GGG + chr4_1:15566060-15566079 None:intergenic 35.0%
!!! ATGAGGTGTTGGGTTTTAAT+TGG + chr4_1:15566065-15566084 None:intergenic 35.0%
AATTAAAATCAGTTAGGGGG+TGG - chr4_1:15566104-15566123 Msa0537310:intron 35.0%
TGCTGATCAGTTAAAGAAAG+TGG - chr4_1:15566130-15566149 Msa0537310:intron 35.0%
GCTGATCAGTTAAAGAAAGT+GGG - chr4_1:15566131-15566150 Msa0537310:intron 35.0%
CTGATCAGTTAAAGAAAGTG+GGG - chr4_1:15566132-15566151 Msa0537310:intron 35.0%
!!! CTGAGGTGTTGGATTTTAAT+TGG - chr4_1:15566228-15566247 Msa0537310:intron 35.0%
!!! GGTGTTGGATTTTAATTGGT+TGG - chr4_1:15566232-15566251 Msa0537310:intron 35.0%
TGTAGCTAAAAAGCAATGTG+AGG + chr4_1:15566448-15566467 None:intergenic 35.0%
ACCAACAACCTCTAATATCA+TGG - chr4_1:15566755-15566774 Msa0537310:intron 35.0%
TCCATGATATTAGAGGTTGT+TGG + chr4_1:15566759-15566778 None:intergenic 35.0%
GTACAATTGATGTCATTGCA+AGG + chr4_1:15567023-15567042 None:intergenic 35.0%
ACAATAGAGATGTCTTCTTG+TGG - chr4_1:15567496-15567515 Msa0537310:intron 35.0%
!! TCAAGATTGTAGAAGTGTTG+TGG - chr4_1:15568075-15568094 Msa0537310:intron 35.0%
TCTTTAACTAAAAGGGAGCA+AGG + chr4_1:15568418-15568437 None:intergenic 35.0%
TGCATTTCTTCTTGTCTATC+CGG - chr4_1:15568595-15568614 Msa0537310:intron 35.0%
! TTTTGACCGGATCTTTAGAT+TGG + chr4_1:15568881-15568900 None:intergenic 35.0%
TCTATAAGCAATAGTACACG+TGG + chr4_1:15569299-15569318 None:intergenic 35.0%
GAAGATTCCCAATTATGGGT+AGG + chr4_1:15559649-15559668 None:intergenic 40.0%
! TGGCCTTAAACCAAGTTTCA+GGG + chr4_1:15559741-15559760 None:intergenic 40.0%
!! GTGATTTTTGGAGAGATAGG+TGG - chr4_1:15559897-15559916 Msa0537310:intron 40.0%
CAAACTCATGCAACATTCCT+TGG + chr4_1:15560228-15560247 None:intergenic 40.0%
AGGAATGTTGCATGAGTTTG+AGG - chr4_1:15560228-15560247 Msa0537310:intron 40.0%
TTATCAATCCAACCCGTGAA+TGG + chr4_1:15560289-15560308 None:intergenic 40.0%
! GCGTCTCGAACAGAATTTTA+AGG - chr4_1:15560327-15560346 Msa0537310:intron 40.0%
TCATCTGCATGCTGTCTATT+TGG + chr4_1:15560397-15560416 None:intergenic 40.0%
TCACATTAAAGGAGTCCTCA+TGG - chr4_1:15560489-15560508 Msa0537310:intron 40.0%
!! CAAGTCCTTTTAGAGGATGA+TGG - chr4_1:15560747-15560766 Msa0537310:intron 40.0%
CATCACCATCATCCTCTAAA+AGG + chr4_1:15560755-15560774 None:intergenic 40.0%
!! TTTTTAGGCATGGCAAATGG+TGG + chr4_1:15560807-15560826 None:intergenic 40.0%
CTCATCTTTGGTACCAAATC+TGG + chr4_1:15560859-15560878 None:intergenic 40.0%
!! TTGAAGCATCTTTTAGGGGA+GGG + chr4_1:15561169-15561188 None:intergenic 40.0%
!! ATTGAAGCATCTTTTAGGGG+AGG + chr4_1:15561170-15561189 None:intergenic 40.0%
GTAATTCAACCTTCGCTTAG+GGG + chr4_1:15561280-15561299 None:intergenic 40.0%
!! AATGTGTCGATTCACATCAG+TGG - chr4_1:15562423-15562442 Msa0537310:intron 40.0%
ACAACTGTTAGACCTTCTGA+AGG + chr4_1:15562454-15562473 None:intergenic 40.0%
! TAACATTGTGAGAGAGTGCA+CGG - chr4_1:15562488-15562507 Msa0537310:intron 40.0%
ACATCTACTCCTACATACAC+TGG + chr4_1:15562597-15562616 None:intergenic 40.0%
TTGAAGGAGTCGGAGATTAT+TGG + chr4_1:15563042-15563061 None:intergenic 40.0%
! AGTTTCATTCGCGAGAGTAT+AGG + chr4_1:15563098-15563117 None:intergenic 40.0%
AGTCAAATAAAGTCAGACCG+AGG + chr4_1:15563308-15563327 None:intergenic 40.0%
!!! TAAGGTTTTAGGTGACGATG+TGG - chr4_1:15563393-15563412 Msa0537310:intron 40.0%
! TGGTGTCAATCTCATTTGTG+TGG - chr4_1:15563413-15563432 Msa0537310:intron 40.0%
! CGTAATGTTCAGAGTTCTGA+GGG + chr4_1:15563480-15563499 None:intergenic 40.0%
TCGTAATGTTCAGAGTTCTG+AGG + chr4_1:15563481-15563500 None:intergenic 40.0%
GAACATTACGATGAACGGTT+TGG - chr4_1:15563490-15563509 Msa0537310:intron 40.0%
! GGTTAAACGAAAGCACAACA+TGG + chr4_1:15563965-15563984 None:intergenic 40.0%
GAGGGAAGATAGTAAGTTAC+CGG + chr4_1:15564322-15564341 None:intergenic 40.0%
ACGAGGGAAATAAATGACGA+TGG + chr4_1:15564412-15564431 None:intergenic 40.0%
GACTCTCAGTGTCTATGATA+TGG + chr4_1:15564543-15564562 None:intergenic 40.0%
CACTGAGAGTCTCACAATTA+AGG - chr4_1:15564552-15564571 Msa0537310:intron 40.0%
TCAGAGAAGTTATCGGATCT+TGG - chr4_1:15565041-15565060 Msa0537310:intron 40.0%
!!! GGTGTTGGGTTTTAATTGGT+TGG + chr4_1:15566061-15566080 None:intergenic 40.0%
TGCAGTGTGTCAATCTAGTT+GGG - chr4_1:15566315-15566334 Msa0537310:intron 40.0%
TTATAAGCAAAGAGGTAGGG+AGG + chr4_1:15566364-15566383 None:intergenic 40.0%
AACCGAGGAAGTGAGATATT+AGG - chr4_1:15567574-15567593 Msa0537310:intron 40.0%
AGCCTAATATCTCACTTCCT+CGG + chr4_1:15567579-15567598 None:intergenic 40.0%
CATTTCTCCTAGGAACTGTA+GGG + chr4_1:15567893-15567912 None:intergenic 40.0%
TCATTTCTCCTAGGAACTGT+AGG + chr4_1:15567894-15567913 None:intergenic 40.0%
GATGGATGAAGCGAAGATTA+TGG - chr4_1:15568123-15568142 Msa0537310:intron 40.0%
CCATGTCCAATCTAAAGATC+CGG - chr4_1:15568872-15568891 Msa0537310:intron 40.0%
ACAGTTTGGTCCTATACCAA+CGG + chr4_1:15570041-15570060 None:intergenic 40.0%
ATTAATGCACGTCATCCACC+TGG - chr4_1:15559614-15559633 Msa0537310:intron 45.0%
TTAATGCACGTCATCCACCT+GGG - chr4_1:15559615-15559634 Msa0537310:intron 45.0%
CTAGAGGCCTACCCATAATT+GGG - chr4_1:15559639-15559658 Msa0537310:intron 45.0%
!! CTGGCCTTAAACCAAGTTTC+AGG + chr4_1:15559742-15559761 None:intergenic 45.0%
ACGAGGATGAAGGAACTAAG+AGG - chr4_1:15560194-15560213 Msa0537310:intron 45.0%
! GGAGATGGATGAGTTTTACC+AGG - chr4_1:15560348-15560367 Msa0537310:intron 45.0%
! GATGGATGAGTTTTACCAGG+AGG - chr4_1:15560351-15560370 Msa0537310:intron 45.0%
ACAGCATGCAGATGATGAAG+AGG - chr4_1:15560402-15560421 Msa0537310:intron 45.0%
! TCAAGCATCTTTGAGGGAAG+TGG - chr4_1:15561875-15561894 Msa0537310:intron 45.0%
!! TGTCGATTCACATCAGTGGT+TGG - chr4_1:15562427-15562446 Msa0537310:intron 45.0%
! AACATTGTGAGAGAGTGCAC+GGG - chr4_1:15562489-15562508 Msa0537310:intron 45.0%
TGCAACCCAACAGTCTCTAA+CGG - chr4_1:15562757-15562776 Msa0537310:intron 45.0%
GAGTTCCGTTAGAGACTGTT+GGG + chr4_1:15562765-15562784 None:intergenic 45.0%
AGAGTTCCGTTAGAGACTGT+TGG + chr4_1:15562766-15562785 None:intergenic 45.0%
TCTTTGGTAGGATCTGACGA+TGG - chr4_1:15562908-15562927 Msa0537310:intron 45.0%
!! TTGGGTGCCATCCGTTTTAA+TGG - chr4_1:15563561-15563580 Msa0537310:intron 45.0%
TAAAATCAGTTAGGGGGTGG+TGG - chr4_1:15566107-15566126 Msa0537310:intron 45.0%
CAGTTAAAGAAAGTGGGGAG+AGG - chr4_1:15566137-15566156 Msa0537310:intron 45.0%
GGGTGTAAGAATGACGTGTT+AGG - chr4_1:15566253-15566272 Msa0537310:intron 45.0%
ACGTGTTAGGTGAGAGTTCA+CGG - chr4_1:15566266-15566285 Msa0537310:intron 45.0%
ACTGCACAAACATCCATCGT+CGG + chr4_1:15566301-15566320 None:intergenic 45.0%
GTGCAGTGTGTCAATCTAGT+TGG - chr4_1:15566314-15566333 Msa0537310:intron 45.0%
GAGAGGAGAACAATATCACG+TGG + chr4_1:15566485-15566504 None:intergenic 45.0%
GTGTTAACCCTACAGTTCCT+AGG - chr4_1:15567883-15567902 Msa0537310:intron 45.0%
CCGGATCTTTAGATTGGACA+TGG + chr4_1:15568875-15568894 None:intergenic 45.0%
TAGTCAACCTCCATATCCGT+TGG - chr4_1:15570022-15570041 Msa0537310:CDS 45.0%
ACCTCCATATCCGTTGGTAT+AGG - chr4_1:15570028-15570047 Msa0537310:CDS 45.0%
TCCTATACCAACGGATATGG+AGG + chr4_1:15570032-15570051 None:intergenic 45.0%
TGGTCCTATACCAACGGATA+TGG + chr4_1:15570035-15570054 None:intergenic 45.0%
!!! ATTATTTTTAAATATTTCTT+TGG + chr4_1:15559792-15559811 None:intergenic 5.0%
!!! ACATATTTTAATTTTATTTT+GGG + chr4_1:15561527-15561546 None:intergenic 5.0%
!!! TAAATTATTTTATTAGTTTT+TGG - chr4_1:15562797-15562816 Msa0537310:intron 5.0%
!!! AAATTATTTTATTAGTTTTT+GGG - chr4_1:15562798-15562817 Msa0537310:intron 5.0%
!!! TTTTTGTTAATTTTTTTTTA+GGG + chr4_1:15563236-15563255 None:intergenic 5.0%
!!! TTTTTTTAATTATTTTAATG+AGG + chr4_1:15566082-15566101 None:intergenic 5.0%
!! TAATTTAATAATCATTAATT+AGG - chr4_1:15568273-15568292 Msa0537310:intron 5.0%
!! ATTCATTTATATATTTAATT+TGG - chr4_1:15568320-15568339 Msa0537310:intron 5.0%
CCAATTATGGGTAGGCCTCT+AGG + chr4_1:15559641-15559660 None:intergenic 50.0%
CCTAGAGGCCTACCCATAAT+TGG - chr4_1:15559638-15559657 Msa0537310:intron 50.0%
GTAGGACTGCTTTCGGTAGA+AGG - chr4_1:15560170-15560189 Msa0537310:intron 50.0%
! TGCTTTCGGTAGAAGGTACG+AGG - chr4_1:15560177-15560196 Msa0537310:intron 50.0%
! GGTAGAAGGTACGAGGATGA+AGG - chr4_1:15560184-15560203 Msa0537310:intron 50.0%
TGGGTCTTAGGAGCCAGATT+TGG - chr4_1:15560843-15560862 Msa0537310:intron 50.0%
TTCAACCTTCGCTTAGGGGA+GGG + chr4_1:15561276-15561295 None:intergenic 50.0%
ATTCAACCTTCGCTTAGGGG+AGG + chr4_1:15561277-15561296 None:intergenic 50.0%
ACGAAATTCTAGCCCGTGCT+TGG + chr4_1:15562256-15562275 None:intergenic 50.0%
! TCAGTGGTTGGTCCTTCAGA+AGG - chr4_1:15562439-15562458 Msa0537310:intron 50.0%
!! AGTTCTGAGGGAGCCTACAA+TGG + chr4_1:15563468-15563487 None:intergenic 50.0%
GGGTGTAAGAATGGCGTGTT+AGG + chr4_1:15566040-15566059 None:intergenic 50.0%
TAGGTGAGAGTTCACGGAGT+AGG - chr4_1:15566272-15566291 Msa0537310:intron 50.0%
AGTCATAGCCCAAACTGCTG+TGG + chr4_1:15569742-15569761 None:intergenic 50.0%
TCAACCTTCGCTTAGGGGAG+GGG + chr4_1:15561275-15561294 None:intergenic 55.0%
ATGGAAACCCGTGCCAAGCA+CGG - chr4_1:15562240-15562259 Msa0537310:intron 55.0%
ATTCTAGCCCGTGCTTGGCA+CGG + chr4_1:15562251-15562270 None:intergenic 55.0%
AGTCAGACCGAGGCACAACT+TGG + chr4_1:15563298-15563317 None:intergenic 55.0%
GTGAGAGTTCACGGAGTAGG+CGG - chr4_1:15566275-15566294 Msa0537310:intron 55.0%
CACGTCAGCCACAGCAGTTT+GGG - chr4_1:15569731-15569750 Msa0537310:CDS 55.0%
TCTGTTCGAGACGCGCACGA+AGG + chr4_1:15560321-15560340 None:intergenic 60.0%
TGGAAACCCGTGCCAAGCAC+GGG - chr4_1:15562241-15562260 Msa0537310:intron 60.0%
TTCTAGCCCGTGCTTGGCAC+GGG + chr4_1:15562250-15562269 None:intergenic 60.0%
TGCACGGGCGTGGTTCTTTG+TGG - chr4_1:15562504-15562523 Msa0537310:intron 60.0%
ACGGGCGTGGTTCTTTGTGG+TGG - chr4_1:15562507-15562526 Msa0537310:intron 60.0%
TGCGGAGAGTCACGCACTTG+AGG - chr4_1:15564013-15564032 Msa0537310:intron 60.0%
CCAAACTGCTGTGGCTGACG+TGG + chr4_1:15569733-15569752 None:intergenic 60.0%
CCACGTCAGCCACAGCAGTT+TGG - chr4_1:15569730-15569749 Msa0537310:CDS 60.0%
CGTCATCCACCTGGGCCTAG+AGG - chr4_1:15559623-15559642 Msa0537310:intron 65.0%
ATGGGTAGGCCTCTAGGCCC+AGG + chr4_1:15559635-15559654 None:intergenic 65.0%
CACTCCCCTCCCCTAAGCGA+AGG - chr4_1:15561268-15561287 Msa0537310:intron 65.0%
! TGTGAGAGAGTGCACGGGCG+TGG - chr4_1:15562494-15562513 Msa0537310:intron 65.0%
GGTAGGCCTCTAGGCCCAGG+TGG + chr4_1:15559632-15559651 None:intergenic 70.0%
ACGGAGTAGGCGGCCGACGA+TGG - chr4_1:15566285-15566304 Msa0537310:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 15559542 15570072 15559542 ID=Msa0537310;Name=Msa0537310
chr4_1 mRNA 15559542 15570072 15559542 ID=Msa0537310-mRNA-1;Parent=Msa0537310;Name=Msa0537310-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|0.75|1|1|4|0|358
chr4_1 exon 15569699 15570072 15569699 ID=Msa0537310-mRNA-1:exon:4760;Parent=Msa0537310-mRNA-1
chr4_1 exon 15569104 15569584 15569104 ID=Msa0537310-mRNA-1:exon:4759;Parent=Msa0537310-mRNA-1
chr4_1 exon 15559736 15559909 15559736 ID=Msa0537310-mRNA-1:exon:4758;Parent=Msa0537310-mRNA-1
chr4_1 exon 15559542 15559589 15559542 ID=Msa0537310-mRNA-1:exon:4757;Parent=Msa0537310-mRNA-1
chr4_1 CDS 15569699 15570072 15569699 ID=Msa0537310-mRNA-1:cds;Parent=Msa0537310-mRNA-1
chr4_1 CDS 15569104 15569584 15569104 ID=Msa0537310-mRNA-1:cds;Parent=Msa0537310-mRNA-1
chr4_1 CDS 15559736 15559909 15559736 ID=Msa0537310-mRNA-1:cds;Parent=Msa0537310-mRNA-1
chr4_1 CDS 15559542 15559589 15559542 ID=Msa0537310-mRNA-1:cds;Parent=Msa0537310-mRNA-1
Gene Sequence

>Msa0537310

ATGGTGTCATTCCTCCTTGTTTTGTGTCTAATTTTTCCATTACTTCTCTTCTTCCTGAAACGTAGTAGAAACATTAATGCACGTCATCCACCTGGGCCTAGAGGCCTACCCATAATTGGGAATCTTCATCAGCTTGACAATTCTATTCTTTATCTTCAATTATCAAAACTTTCAAAAATTTATGGACCAATATTTTCCCTGAAACTTGGTTTAAGGCCAGCAATTGTTGTTTCTTCAGATAAAATTGCCAAAGAAATATTTAAAAATAATGATCAAGTGTTTTCTAATAGACCTATGTTATATAGCCAGCAAAGATTATCTTATAATGTGTCAGAAATTGCATTTTCTCAATATAGTGATTTTTGGAGAGATAGTGCTAAGCGTGTGTCATATTATTCCTCTATAAGAAAGTTTGAGGTGAAGCAAATGATAAAAAATATTTCTAATCATGCTGCTTCTTCAATTGTTACAAATTTGAGTGAGATTTTAACTTCTCTCTCGAGTACAATAATTTGTAGGACTGCTTTCGGTAGAAGGTACGAGGATGAAGGAACTAAGAGGAGTAAATTCCAAGGAATGTTGCATGAGTTTGAGGCCATGTTGACAGCTTTCTTTGTTTCGGATTATATTCCATTCACGGGTTGGATTGATAAACTATCTGGCCTTCGTGCGCGTCTCGAACAGAATTTTAAGGAGATGGATGAGTTTTACCAGGAGGTTATTGATGAACATTTGGATCCAAATAGACAGCATGCAGATGATGAAGAGGTTATTGTTGATGTCTTACTACAATTGAAGAAAGAACGTTTGTTTCCAATTGATCTTACTTTTGATCACATTAAAGGAGTCCTCATGAACATGCTTGTAGCTGCAACTGATACCACGTCAGCCACAGCAGTTTGGGCTATGACTGCCTTAATAAAAAACCCAAGAGTAATGAAGAAAGTACAACAAGAGATTAGGAATTCAAGAGTTAAAAAAGAATTTATAGATGAAGATGATATACAAAATTTCTCCTACTTGAAGGCATCAACCTCCATATCCGTTGGTATAGGACCAAACTGTCCGTTGCTATAG
Protein sequence

>Msa0537310

MVSFLLVLCLIFPLLLFFLKRSRNINARHPPGPRGLPIIGNLHQLDNSILYLQLSKLSKIYGPIFSLKLGLRPAIVVSSDKIAKEIFKNNDQVFSNRPMLYSQQRLSYNVSEIAFSQYSDFWRDSAKRVSYYSSIRKFEVKQMIKNISNHAASSIVTNLSEILTSLSSTIICRTAFGRRYEDEGTKRSKFQGMLHEFEAMLTAFFVSDYIPFTGWIDKLSGLRARLEQNFKEMDEFYQEVIDEHLDPNRQHADDEEVIVDVLLQLKKERLFPIDLTFDHIKGVLMNMLVAATDTTSATAVWAMTALIKNPRVMKKVQQEIRNSRVKKEFIDEDDIQNFSYLKASTSISVGIGPNCPLL*