Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299370 | sp|Q9LV10|PTR53_ARATH | 61.290 | 372 | 138 | 3 | 11 | 381 | 31 | 397 | 5.91e-163 | 473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299370 | G7JPU7 | 92.913 | 381 | 25 | 2 | 1 | 381 | 1 | 379 | 0.0 | 724 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043840 | Msa1299370 | -0.825370 | 4.864865e-54 | -8.615850e-47 |
| Msa0047470 | Msa1299370 | 0.820275 | 7.476370e-53 | -8.615850e-47 |
| Msa0053960 | Msa1299370 | 0.801209 | 1.003165e-48 | -8.615850e-47 |
| Msa0057740 | Msa1299370 | 0.813937 | 1.987718e-51 | -8.615850e-47 |
| Msa0090500 | Msa1299370 | -0.833974 | 3.917716e-56 | -8.615850e-47 |
| Msa0103060 | Msa1299370 | 0.805808 | 1.116239e-49 | -8.615850e-47 |
| Msa0610360 | Msa1299370 | 0.828697 | 7.783947e-55 | -8.615850e-47 |
| Msa0621780 | Msa1299370 | 0.811143 | 8.113194e-51 | -8.615850e-47 |
| Msa0639030 | Msa1299370 | 0.809345 | 1.980879e-50 | -8.615850e-47 |
| Msa0643020 | Msa1299370 | -0.805998 | 1.018316e-49 | -8.615850e-47 |
| Msa0650890 | Msa1299370 | 0.828829 | 7.230366e-55 | -8.615850e-47 |
| Msa0679780 | Msa1299370 | 0.835008 | 2.154571e-56 | -8.615850e-47 |
| Msa0682730 | Msa1299370 | -0.815834 | 7.546734e-52 | -8.615850e-47 |
| Msa0697600 | Msa1299370 | 0.819394 | 1.188550e-52 | -8.615850e-47 |
| Msa0705050 | Msa1299370 | 0.832568 | 8.775594e-56 | -8.615850e-47 |
| Msa0715510 | Msa1299370 | -0.808894 | 2.474717e-50 | -8.615850e-47 |
| Msa0773260 | Msa1299370 | 0.824305 | 8.675156e-54 | -8.615850e-47 |
| Msa0773290 | Msa1299370 | 0.842443 | 2.577598e-58 | -8.615850e-47 |
| Msa0782030 | Msa1299370 | 0.825176 | 5.405983e-54 | -8.615850e-47 |
| Msa0795710 | Msa1299370 | 0.811467 | 6.901026e-51 | -8.615850e-47 |
| Msa0802530 | Msa1299370 | 0.817673 | 2.919265e-52 | -8.615850e-47 |
| Msa0813630 | Msa1299370 | 0.828063 | 1.106756e-54 | -8.615850e-47 |
| Msa0822370 | Msa1299370 | 0.816277 | 6.006715e-52 | -8.615850e-47 |
| Msa0833450 | Msa1299370 | 0.808600 | 2.859353e-50 | -8.615850e-47 |
| Msa0840890 | Msa1299370 | 0.827611 | 1.421911e-54 | -8.615850e-47 |
| Msa0135890 | Msa1299370 | -0.801858 | 7.385542e-49 | -8.615850e-47 |
| Msa0137970 | Msa1299370 | -0.827594 | 1.435528e-54 | -8.615850e-47 |
| Msa0183920 | Msa1299370 | -0.828945 | 6.779501e-55 | -8.615850e-47 |
| Msa0188500 | Msa1299370 | 0.824087 | 9.757256e-54 | -8.615850e-47 |
| Msa0197730 | Msa1299370 | 0.808612 | 2.843181e-50 | -8.615850e-47 |
| Msa0200840 | Msa1299370 | 0.817536 | 3.133430e-52 | -8.615850e-47 |
| Msa0200870 | Msa1299370 | 0.806407 | 8.349318e-50 | -8.615850e-47 |
| Msa0203180 | Msa1299370 | 0.832167 | 1.103203e-55 | -8.615850e-47 |
| Msa0210880 | Msa1299370 | 0.821017 | 5.047907e-53 | -8.615850e-47 |
| Msa0220640 | Msa1299370 | 0.813135 | 2.983047e-51 | -8.615850e-47 |
| Msa0225880 | Msa1299370 | 0.821914 | 3.133597e-53 | -8.615850e-47 |
| Msa0230980 | Msa1299370 | 0.825296 | 5.064784e-54 | -8.615850e-47 |
| Msa1237260 | Msa1299370 | 0.809232 | 2.094940e-50 | -8.615850e-47 |
| Msa1240060 | Msa1299370 | -0.815088 | 1.105838e-51 | -8.615850e-47 |
| Msa1240820 | Msa1299370 | 0.827618 | 1.416373e-54 | -8.615850e-47 |
| Msa1242990 | Msa1299370 | 0.806412 | 8.330918e-50 | -8.615850e-47 |
| Msa1282210 | Msa1299370 | 0.838849 | 2.252642e-57 | -8.615850e-47 |
| Msa1284390 | Msa1299370 | 0.826804 | 2.218879e-54 | -8.615850e-47 |
| Msa1299370 | Msa1309890 | 0.825699 | 4.064654e-54 | -8.615850e-47 |
| Msa1299370 | Msa1320530 | -0.814791 | 1.286980e-51 | -8.615850e-47 |
| Msa1299370 | Msa1321390 | 0.810977 | 8.815131e-51 | -8.615850e-47 |
| Msa1299370 | Msa1335970 | -0.822012 | 2.973776e-53 | -8.615850e-47 |
| Msa1299370 | Msa1342400 | 0.816158 | 6.388193e-52 | -8.615850e-47 |
| Msa1299370 | Msa1349810 | 0.801646 | 8.162409e-49 | -8.615850e-47 |
| Msa1299370 | Msa1353280 | 0.805280 | 1.440530e-49 | -8.615850e-47 |
| Msa1299370 | Msa1388520 | 0.816551 | 5.215993e-52 | -8.615850e-47 |
| Msa1299370 | Msa1395580 | 0.803881 | 2.821653e-49 | -8.615850e-47 |
| Msa1299370 | Msa1407210 | -0.815400 | 9.425186e-52 | -8.615850e-47 |
| Msa1299370 | Msa1413900 | 0.914540 | 1.700185e-84 | -8.615850e-47 |
| Msa1299370 | Msa1415270 | 0.816342 | 5.808988e-52 | -8.615850e-47 |
| Msa1299370 | Msa1428440 | 0.802538 | 5.349596e-49 | -8.615850e-47 |
| Msa1299370 | Msa1440180 | 0.818108 | 2.328350e-52 | -8.615850e-47 |
| Msa1299370 | Msa1449740 | 0.814670 | 1.368986e-51 | -8.615850e-47 |
| Msa1299370 | Msa1450630 | 0.802005 | 6.886556e-49 | -8.615850e-47 |
| Msa1299370 | Msa1452200 | 0.826206 | 3.080585e-54 | -8.615850e-47 |
| Msa0378670 | Msa1299370 | 0.820091 | 8.236415e-53 | -8.615850e-47 |
| Msa0378700 | Msa1299370 | 0.829570 | 4.780748e-55 | -8.615850e-47 |
| Msa0428330 | Msa1299370 | 0.814020 | 1.905824e-51 | -8.615850e-47 |
| Msa0454940 | Msa1299370 | 0.812499 | 4.111484e-51 | -8.615850e-47 |
| Msa0456480 | Msa1299370 | 0.821945 | 3.082347e-53 | -8.615850e-47 |
| Msa0481050 | Msa1299370 | 0.826309 | 2.911104e-54 | -8.615850e-47 |
| Msa0984860 | Msa1299370 | 0.819279 | 1.262560e-52 | -8.615850e-47 |
| Msa0985040 | Msa1299370 | 0.820742 | 5.841633e-53 | -8.615850e-47 |
| Msa0999590 | Msa1299370 | 0.826609 | 2.469827e-54 | -8.615850e-47 |
| Msa1010470 | Msa1299370 | 0.831669 | 1.464524e-55 | -8.615850e-47 |
| Msa1030430 | Msa1299370 | 0.818590 | 1.811003e-52 | -8.615850e-47 |
| Msa1036020 | Msa1299370 | -0.841791 | 3.835337e-58 | -8.615850e-47 |
| Msa1040730 | Msa1299370 | -0.871432 | 6.864453e-67 | -8.615850e-47 |
| Msa1052030 | Msa1299370 | 0.827044 | 1.943674e-54 | -8.615850e-47 |
| Msa1061760 | Msa1299370 | -0.821622 | 3.660790e-53 | -8.615850e-47 |
| Msa1067910 | Msa1299370 | 0.813786 | 2.145371e-51 | -8.615850e-47 |
| Msa1069440 | Msa1299370 | 0.832460 | 9.335480e-56 | -8.615850e-47 |
| Msa1076280 | Msa1299370 | -0.825000 | 5.948283e-54 | -8.615850e-47 |
| Msa1079610 | Msa1299370 | 0.810360 | 1.198130e-50 | -8.615850e-47 |
| Msa1096570 | Msa1299370 | 0.807625 | 4.612739e-50 | -8.615850e-47 |
| Msa0243470 | Msa1299370 | 0.805085 | 1.582316e-49 | -8.615850e-47 |
| Msa0246300 | Msa1299370 | 0.827592 | 1.436984e-54 | -8.615850e-47 |
| Msa0251150 | Msa1299370 | 0.809265 | 2.060868e-50 | -8.615850e-47 |
| Msa0260470 | Msa1299370 | 0.819806 | 9.573047e-53 | -8.615850e-47 |
| Msa0270460 | Msa1299370 | 0.835990 | 1.216453e-56 | -8.615850e-47 |
| Msa0304110 | Msa1299370 | 0.817106 | 3.916834e-52 | -8.615850e-47 |
| Msa0309060 | Msa1299370 | 0.803320 | 3.688494e-49 | -8.615850e-47 |
| Msa0341190 | Msa1299370 | 0.825516 | 4.491148e-54 | -8.615850e-47 |
| Msa0362430 | Msa1299370 | 0.840045 | 1.101637e-57 | -8.615850e-47 |
| Msa1117830 | Msa1299370 | 0.803866 | 2.841911e-49 | -8.615850e-47 |
| Msa1150860 | Msa1299370 | -0.818255 | 2.156868e-52 | -8.615850e-47 |
| Msa1177620 | Msa1299370 | 0.801802 | 7.582900e-49 | -8.615850e-47 |
| Msa1186580 | Msa1299370 | 0.816822 | 4.537076e-52 | -8.615850e-47 |
| Msa1211260 | Msa1299370 | 0.924804 | 4.316939e-90 | -8.615850e-47 |
| Msa1211300 | Msa1299370 | 0.904676 | 9.565281e-80 | -8.615850e-47 |
| Msa1211390 | Msa1299370 | 0.896266 | 4.350400e-76 | -8.615850e-47 |
| Msa1219780 | Msa1299370 | -0.806462 | 8.131202e-50 | -8.615850e-47 |
| Msa0500490 | Msa1299370 | 0.825095 | 5.651635e-54 | -8.615850e-47 |
| Msa0502910 | Msa1299370 | 0.802079 | 6.650915e-49 | -8.615850e-47 |
| Msa0521940 | Msa1299370 | -0.810136 | 1.339458e-50 | -8.615850e-47 |
| Msa0534380 | Msa1299370 | 0.802779 | 4.771043e-49 | -8.615850e-47 |
| Msa0537310 | Msa1299370 | 0.806122 | 9.586926e-50 | -8.615850e-47 |
| Msa0545230 | Msa1299370 | 0.807918 | 3.997828e-50 | -8.615850e-47 |
| Msa0546370 | Msa1299370 | 0.802264 | 6.092206e-49 | -8.615850e-47 |
| Msa0549330 | Msa1299370 | 0.823723 | 1.187818e-53 | -8.615850e-47 |
| Msa0555960 | Msa1299370 | 0.820190 | 7.817748e-53 | -8.615850e-47 |
| Msa0560370 | Msa1299370 | 0.813027 | 3.150862e-51 | -8.615850e-47 |
| Msa0601920 | Msa1299370 | -0.812818 | 3.501686e-51 | -8.615850e-47 |
| Msa0850720 | Msa1299370 | 0.823930 | 1.062139e-53 | -8.615850e-47 |
| Msa0850740 | Msa1299370 | 0.843319 | 1.507587e-58 | -8.615850e-47 |
| Msa0861560 | Msa1299370 | 0.810481 | 1.128245e-50 | -8.615850e-47 |
| Msa0861800 | Msa1299370 | 0.818617 | 1.785282e-52 | -8.615850e-47 |
| Msa0899730 | Msa1299370 | 0.822757 | 1.997196e-53 | -8.615850e-47 |
| Msa0913120 | Msa1299370 | 0.853106 | 2.975982e-61 | -8.615850e-47 |
| Msa0934830 | Msa1299370 | 0.818526 | 1.872289e-52 | -8.615850e-47 |
| Msa0964650 | Msa1299370 | 0.825098 | 5.639592e-54 | -8.615850e-47 |
| Msa0971860 | Msa1299370 | 0.812004 | 5.271604e-51 | -8.615850e-47 |
| Msa0975560 | Msa1299370 | 0.822432 | 2.376719e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299370 | MtrunA17_Chr4g0059991 | 92.913 | 381 | 25 | 2 | 1 | 381 | 1 | 379 | 0.0 | 724 |
| Msa1299370 | MtrunA17_Chr4g0059971 | 69.689 | 386 | 108 | 3 | 3 | 381 | 7 | 390 | 0.0 | 559 |
| Msa1299370 | MtrunA17_Chr4g0059981 | 66.580 | 386 | 113 | 3 | 9 | 381 | 5 | 387 | 0.0 | 523 |
| Msa1299370 | MtrunA17_Chr5g0415791 | 47.899 | 357 | 181 | 3 | 28 | 381 | 34 | 388 | 4.90e-116 | 350 |
| Msa1299370 | MtrunA17_Chr4g0060001 | 44.173 | 369 | 200 | 3 | 12 | 379 | 18 | 381 | 9.80e-111 | 336 |
| Msa1299370 | MtrunA17_Chr7g0240271 | 40.625 | 384 | 223 | 4 | 1 | 381 | 1 | 382 | 8.38e-100 | 307 |
| Msa1299370 | MtrunA17_Chr7g0240281 | 39.378 | 386 | 227 | 5 | 1 | 381 | 1 | 384 | 3.40e-97 | 301 |
| Msa1299370 | MtrunA17_Chr8g0362781 | 35.825 | 388 | 232 | 6 | 7 | 381 | 9 | 392 | 4.83e-86 | 272 |
| Msa1299370 | MtrunA17_Chr8g0390331 | 40.212 | 378 | 206 | 9 | 5 | 379 | 2 | 362 | 2.40e-80 | 257 |
| Msa1299370 | MtrunA17_Chr1g0147631 | 35.917 | 387 | 223 | 8 | 8 | 381 | 1 | 375 | 1.17e-78 | 253 |
| Msa1299370 | MtrunA17_Chr8g0362801 | 45.324 | 278 | 139 | 6 | 111 | 381 | 1 | 272 | 7.09e-77 | 245 |
| Msa1299370 | MtrunA17_Chr7g0255621 | 37.500 | 384 | 220 | 8 | 8 | 381 | 1 | 374 | 1.30e-76 | 248 |
| Msa1299370 | MtrunA17_Chr2g0331511 | 37.027 | 370 | 220 | 7 | 17 | 381 | 12 | 373 | 6.06e-76 | 246 |
| Msa1299370 | MtrunA17_Chr5g0422881 | 35.751 | 386 | 223 | 6 | 3 | 381 | 4 | 371 | 6.70e-76 | 245 |
| Msa1299370 | MtrunA17_Chr8g0375311 | 35.598 | 368 | 224 | 5 | 17 | 381 | 34 | 391 | 3.95e-73 | 238 |
| Msa1299370 | MtrunA17_Chr7g0240181 | 42.963 | 270 | 150 | 3 | 114 | 381 | 4 | 271 | 3.41e-72 | 233 |
| Msa1299370 | MtrunA17_Chr3g0142101 | 35.310 | 371 | 226 | 5 | 10 | 379 | 25 | 382 | 4.21e-72 | 235 |
| Msa1299370 | MtrunA17_Chr7g0240211 | 43.511 | 262 | 144 | 3 | 122 | 381 | 12 | 271 | 5.33e-72 | 232 |
| Msa1299370 | MtrunA17_Chr4g0005901 | 35.079 | 382 | 237 | 7 | 1 | 381 | 10 | 381 | 8.43e-72 | 234 |
| Msa1299370 | MtrunA17_Chr7g0240151 | 42.963 | 270 | 150 | 3 | 114 | 381 | 4 | 271 | 1.29e-71 | 231 |
| Msa1299370 | MtrunA17_Chr7g0235521 | 42.963 | 270 | 150 | 3 | 114 | 381 | 4 | 271 | 1.76e-71 | 231 |
| Msa1299370 | MtrunA17_Chr8g0375351 | 34.783 | 368 | 223 | 7 | 4 | 368 | 27 | 380 | 1.93e-71 | 234 |
| Msa1299370 | MtrunA17_Chr8g0375321 | 35.309 | 388 | 230 | 10 | 2 | 381 | 14 | 388 | 8.90e-71 | 232 |
| Msa1299370 | MtrunA17_Chr3g0142091 | 33.780 | 373 | 239 | 2 | 7 | 379 | 10 | 374 | 1.31e-70 | 231 |
| Msa1299370 | MtrunA17_Chr7g0240131 | 42.593 | 270 | 151 | 3 | 114 | 381 | 4 | 271 | 1.40e-70 | 229 |
| Msa1299370 | MtrunA17_Chr7g0255611 | 34.286 | 385 | 239 | 7 | 1 | 381 | 9 | 383 | 5.60e-70 | 230 |
| Msa1299370 | MtrunA17_Chr7g0255601 | 34.474 | 380 | 236 | 7 | 7 | 381 | 10 | 381 | 7.92e-70 | 230 |
| Msa1299370 | MtrunA17_Chr8g0375331 | 36.533 | 375 | 217 | 10 | 15 | 381 | 14 | 375 | 1.19e-69 | 228 |
| Msa1299370 | MtrunA17_Chr7g0241741 | 35.165 | 364 | 223 | 6 | 18 | 381 | 21 | 371 | 2.44e-69 | 228 |
| Msa1299370 | MtrunA17_Chr8g0375341 | 34.031 | 382 | 241 | 7 | 3 | 381 | 18 | 391 | 2.77e-69 | 228 |
| Msa1299370 | MtrunA17_Chr3g0104011 | 35.127 | 353 | 222 | 3 | 29 | 381 | 28 | 373 | 7.16e-69 | 226 |
| Msa1299370 | MtrunA17_Chr2g0331521 | 35.917 | 387 | 222 | 11 | 8 | 381 | 1 | 374 | 2.02e-68 | 226 |
| Msa1299370 | MtrunA17_Chr2g0331461 | 34.987 | 383 | 227 | 7 | 7 | 381 | 9 | 377 | 2.35e-68 | 227 |
| Msa1299370 | MtrunA17_Chr4g0003761 | 33.862 | 378 | 237 | 8 | 6 | 381 | 14 | 380 | 6.03e-68 | 225 |
| Msa1299370 | MtrunA17_Chr2g0331481 | 33.681 | 383 | 232 | 7 | 7 | 381 | 9 | 377 | 1.66e-67 | 224 |
| Msa1299370 | MtrunA17_Chr8g0375361 | 36.261 | 353 | 218 | 4 | 29 | 381 | 45 | 390 | 1.77e-67 | 223 |
| Msa1299370 | MtrunA17_Chr1g0157601 | 33.511 | 376 | 236 | 9 | 8 | 381 | 1 | 364 | 3.18e-67 | 222 |
| Msa1299370 | MtrunA17_Chr8g0375291 | 34.521 | 365 | 232 | 4 | 17 | 381 | 34 | 391 | 7.54e-67 | 221 |
| Msa1299370 | MtrunA17_Chr2g0331471 | 34.103 | 390 | 228 | 9 | 9 | 381 | 63 | 440 | 3.02e-65 | 219 |
| Msa1299370 | MtrunA17_Chr1g0157611 | 34.748 | 377 | 231 | 8 | 8 | 381 | 1 | 365 | 5.68e-65 | 216 |
| Msa1299370 | MtrunA17_Chr5g0400371 | 32.474 | 388 | 248 | 5 | 3 | 381 | 85 | 467 | 3.13e-63 | 214 |
| Msa1299370 | MtrunA17_Chr7g0261811 | 32.258 | 372 | 233 | 6 | 15 | 381 | 19 | 376 | 1.34e-62 | 211 |
| Msa1299370 | MtrunA17_Chr5g0399071 | 32.267 | 375 | 241 | 5 | 12 | 381 | 14 | 380 | 1.32e-61 | 208 |
| Msa1299370 | MtrunA17_Chr1g0157621 | 34.808 | 339 | 209 | 7 | 44 | 381 | 1 | 328 | 1.15e-60 | 205 |
| Msa1299370 | MtrunA17_Chr5g0399061 | 34.078 | 358 | 225 | 6 | 28 | 381 | 32 | 382 | 1.49e-60 | 205 |
| Msa1299370 | MtrunA17_Chr7g0214461 | 30.749 | 374 | 251 | 3 | 8 | 381 | 63 | 428 | 5.98e-60 | 204 |
| Msa1299370 | MtrunA17_Chr1g0166791 | 32.703 | 370 | 234 | 7 | 15 | 381 | 16 | 373 | 4.05e-59 | 201 |
| Msa1299370 | MtrunA17_Chr1g0177591 | 31.783 | 387 | 230 | 10 | 5 | 381 | 21 | 383 | 2.88e-58 | 199 |
| Msa1299370 | MtrunA17_Chr4g0054891 | 32.295 | 353 | 236 | 2 | 29 | 381 | 116 | 465 | 1.64e-57 | 198 |
| Msa1299370 | MtrunA17_Chr7g0261771 | 32.493 | 357 | 224 | 6 | 29 | 381 | 37 | 380 | 2.81e-57 | 196 |
| Msa1299370 | MtrunA17_Chr5g0415841 | 36.496 | 274 | 167 | 4 | 111 | 381 | 1 | 270 | 6.16e-57 | 192 |
| Msa1299370 | MtrunA17_Chr3g0114501 | 33.613 | 357 | 219 | 8 | 29 | 381 | 28 | 370 | 1.59e-56 | 194 |
| Msa1299370 | MtrunA17_Chr7g0261881 | 30.914 | 372 | 238 | 6 | 15 | 381 | 19 | 376 | 3.96e-56 | 193 |
| Msa1299370 | MtrunA17_Chr2g0326211 | 35.156 | 384 | 229 | 8 | 5 | 381 | 2 | 372 | 6.54e-56 | 192 |
| Msa1299370 | MtrunA17_Chr3g0142111 | 33.648 | 318 | 203 | 3 | 1 | 313 | 19 | 333 | 1.50e-55 | 186 |
| Msa1299370 | MtrunA17_Chr7g0261731 | 30.117 | 342 | 225 | 4 | 15 | 353 | 23 | 353 | 6.17e-55 | 184 |
| Msa1299370 | MtrunA17_Chr4g0063591 | 35.854 | 357 | 214 | 8 | 28 | 381 | 27 | 371 | 8.07e-55 | 189 |
| Msa1299370 | MtrunA17_Chr4g0008651 | 33.239 | 355 | 225 | 6 | 28 | 381 | 39 | 382 | 1.09e-54 | 189 |
| Msa1299370 | MtrunA17_Chr7g0261791 | 31.285 | 358 | 231 | 4 | 15 | 368 | 21 | 367 | 2.98e-54 | 188 |
| Msa1299370 | MtrunA17_Chr2g0325951 | 32.558 | 387 | 234 | 9 | 5 | 381 | 2 | 371 | 9.37e-54 | 186 |
| Msa1299370 | MtrunA17_Chr7g0217461 | 31.161 | 353 | 238 | 3 | 29 | 381 | 30 | 377 | 1.10e-53 | 187 |
| Msa1299370 | MtrunA17_Chr4g0056431 | 34.078 | 358 | 228 | 6 | 28 | 381 | 30 | 383 | 3.79e-53 | 185 |
| Msa1299370 | MtrunA17_Chr1g0166741 | 31.373 | 357 | 230 | 7 | 28 | 381 | 32 | 376 | 4.85e-53 | 185 |
| Msa1299370 | MtrunA17_Chr7g0214731 | 32.749 | 342 | 220 | 2 | 28 | 364 | 66 | 402 | 6.08e-53 | 186 |
| Msa1299370 | MtrunA17_Chr3g0112671 | 32.225 | 391 | 239 | 11 | 2 | 381 | 4 | 379 | 9.27e-53 | 184 |
| Msa1299370 | MtrunA17_Chr1g0187241 | 29.810 | 369 | 246 | 5 | 15 | 381 | 18 | 375 | 2.88e-52 | 183 |
| Msa1299370 | MtrunA17_Chr7g0218851 | 30.645 | 372 | 248 | 4 | 12 | 381 | 35 | 398 | 3.62e-52 | 183 |
| Msa1299370 | MtrunA17_Chr3g0112611 | 33.671 | 395 | 231 | 11 | 1 | 381 | 1 | 378 | 1.27e-51 | 181 |
| Msa1299370 | MtrunA17_Chr7g0240381 | 31.429 | 385 | 244 | 9 | 3 | 381 | 7 | 377 | 1.62e-51 | 181 |
| Msa1299370 | MtrunA17_Chr1g0166711 | 30.623 | 369 | 242 | 6 | 15 | 381 | 17 | 373 | 6.72e-51 | 179 |
| Msa1299370 | MtrunA17_Chr7g0261851 | 31.152 | 382 | 246 | 6 | 4 | 381 | 9 | 377 | 8.25e-51 | 179 |
| Msa1299370 | MtrunA17_Chr3g0077151 | 31.452 | 372 | 206 | 8 | 17 | 381 | 22 | 351 | 6.30e-50 | 176 |
| Msa1299370 | MtrunA17_Chr1g0213711 | 30.105 | 382 | 246 | 7 | 3 | 381 | 8 | 371 | 6.61e-50 | 176 |
| Msa1299370 | MtrunA17_Chr2g0325961 | 33.158 | 380 | 243 | 7 | 5 | 381 | 2 | 373 | 9.58e-50 | 175 |
| Msa1299370 | MtrunA17_Chr1g0166771 | 31.395 | 344 | 221 | 7 | 41 | 381 | 9 | 340 | 2.49e-49 | 174 |
| Msa1299370 | MtrunA17_Chr7g0261751 | 27.475 | 404 | 246 | 6 | 15 | 381 | 23 | 416 | 1.57e-48 | 171 |
| Msa1299370 | MtrunA17_Chr5g0439381 | 33.889 | 360 | 216 | 6 | 28 | 381 | 33 | 376 | 1.33e-47 | 170 |
| Msa1299370 | MtrunA17_Chr4g0014841 | 32.075 | 371 | 204 | 10 | 25 | 381 | 21 | 357 | 2.83e-47 | 169 |
| Msa1299370 | MtrunA17_Chr7g0271221 | 32.033 | 359 | 222 | 9 | 11 | 364 | 2 | 343 | 3.03e-47 | 169 |
| Msa1299370 | MtrunA17_Chr4g0014781 | 32.258 | 372 | 210 | 9 | 17 | 381 | 23 | 359 | 4.72e-47 | 168 |
| Msa1299370 | MtrunA17_Chr4g0014791 | 32.888 | 374 | 197 | 10 | 25 | 381 | 21 | 357 | 6.49e-47 | 168 |
| Msa1299370 | MtrunA17_Chr1g0193391 | 32.249 | 338 | 212 | 7 | 28 | 364 | 22 | 343 | 6.90e-47 | 168 |
| Msa1299370 | MtrunA17_Chr4g0014801 | 33.333 | 360 | 198 | 9 | 29 | 381 | 35 | 359 | 1.03e-46 | 167 |
| Msa1299370 | MtrunA17_Chr1g0147591 | 42.365 | 203 | 103 | 7 | 150 | 347 | 7 | 200 | 1.88e-46 | 157 |
| Msa1299370 | MtrunA17_Chr4g0014871 | 30.831 | 373 | 209 | 10 | 25 | 381 | 22 | 361 | 7.25e-46 | 165 |
| Msa1299370 | MtrunA17_Chr8g0353031 | 30.280 | 393 | 221 | 7 | 8 | 381 | 1 | 359 | 1.23e-45 | 164 |
| Msa1299370 | MtrunA17_Chr2g0284701 | 30.570 | 386 | 259 | 6 | 3 | 381 | 10 | 393 | 5.03e-45 | 163 |
| Msa1299370 | MtrunA17_Chr4g0011471 | 29.191 | 346 | 238 | 5 | 38 | 381 | 31 | 371 | 1.19e-44 | 162 |
| Msa1299370 | MtrunA17_Chr2g0276751 | 27.548 | 363 | 234 | 6 | 24 | 381 | 39 | 377 | 3.83e-41 | 152 |
| Msa1299370 | MtrunA17_Chr3g0133341 | 30.000 | 360 | 229 | 9 | 28 | 380 | 19 | 362 | 5.89e-41 | 152 |
| Msa1299370 | MtrunA17_Chr8g0379971 | 27.481 | 393 | 246 | 6 | 17 | 381 | 14 | 395 | 2.99e-40 | 150 |
| Msa1299370 | MtrunA17_Chr1g0177611 | 32.222 | 270 | 156 | 8 | 119 | 381 | 5 | 254 | 1.79e-38 | 143 |
| Msa1299370 | MtrunA17_Chr1g0177631 | 31.852 | 270 | 157 | 8 | 119 | 381 | 5 | 254 | 2.15e-38 | 142 |
| Msa1299370 | MtrunA17_Chr4g0069581 | 29.738 | 343 | 220 | 7 | 42 | 381 | 5 | 329 | 2.92e-38 | 144 |
| Msa1299370 | MtrunA17_Chr4g0011041 | 24.810 | 395 | 276 | 5 | 2 | 381 | 4 | 392 | 3.17e-37 | 141 |
| Msa1299370 | MtrunA17_Chr7g0261661 | 30.657 | 274 | 175 | 5 | 111 | 381 | 1 | 262 | 3.37e-36 | 137 |
| Msa1299370 | MtrunA17_Chr1g0166731 | 31.387 | 274 | 174 | 5 | 110 | 381 | 9 | 270 | 3.77e-35 | 134 |
| Msa1299370 | MtrunA17_Chr3g0082631 | 34.914 | 232 | 141 | 4 | 155 | 381 | 40 | 266 | 8.01e-35 | 133 |
| Msa1299370 | MtrunA17_Chr8g0362711 | 28.610 | 367 | 254 | 6 | 17 | 381 | 18 | 378 | 3.98e-34 | 132 |
| Msa1299370 | MtrunA17_Chr5g0415961 | 26.893 | 383 | 245 | 7 | 17 | 381 | 18 | 383 | 6.90e-34 | 132 |
| Msa1299370 | MtrunA17_Chr8g0379991 | 25.698 | 358 | 231 | 6 | 44 | 368 | 1 | 356 | 2.79e-31 | 124 |
| Msa1299370 | MtrunA17_Chr4g0014861 | 30.315 | 254 | 151 | 7 | 133 | 381 | 4 | 236 | 4.14e-29 | 117 |
| Msa1299370 | MtrunA17_Chr3g0112651 | 31.847 | 157 | 103 | 2 | 110 | 266 | 21 | 173 | 1.73e-23 | 97.1 |
| Msa1299370 | MtrunA17_Chr8g0362791 | 50.602 | 83 | 41 | 0 | 27 | 109 | 40 | 122 | 1.85e-22 | 92.4 |
| Msa1299370 | MtrunA17_Chr6g0451841 | 26.685 | 356 | 210 | 11 | 42 | 381 | 24 | 344 | 1.30e-18 | 87.4 |
| Msa1299370 | MtrunA17_Chr7g0240221 | 33.636 | 110 | 72 | 1 | 1 | 109 | 4 | 113 | 3.26e-16 | 74.3 |
| Msa1299370 | MtrunA17_Chr7g0240191 | 33.636 | 110 | 72 | 1 | 1 | 109 | 4 | 113 | 3.26e-16 | 74.3 |
| Msa1299370 | MtrunA17_Chr7g0240161 | 33.636 | 110 | 72 | 1 | 1 | 109 | 4 | 113 | 3.26e-16 | 74.3 |
| Msa1299370 | MtrunA17_Chr7g0240141 | 33.636 | 110 | 72 | 1 | 1 | 109 | 4 | 113 | 4.05e-16 | 73.9 |
| Msa1299370 | MtrunA17_Chr4g0060061 | 32.308 | 130 | 86 | 2 | 129 | 257 | 2 | 130 | 4.30e-16 | 74.3 |
| Msa1299370 | MtrunA17_Chr7g0235511 | 33.929 | 112 | 71 | 2 | 1 | 109 | 4 | 115 | 7.57e-15 | 70.5 |
| Msa1299370 | MtrunA17_Chr7g0234381 | 26.667 | 270 | 162 | 8 | 110 | 379 | 3 | 236 | 1.46e-14 | 74.7 |
| Msa1299370 | MtrunA17_Chr7g0234181 | 25.954 | 262 | 158 | 7 | 118 | 379 | 6 | 231 | 1.57e-14 | 74.7 |
| Msa1299370 | MtrunA17_Chr8g0382591 | 41.176 | 85 | 47 | 3 | 298 | 381 | 3 | 85 | 2.24e-14 | 69.7 |
| Msa1299370 | MtrunA17_Chr7g0261831 | 32.836 | 134 | 72 | 4 | 252 | 381 | 1 | 120 | 5.98e-13 | 67.4 |
| Msa1299370 | MtrunA17_Chr7g0234151 | 25.185 | 270 | 166 | 7 | 110 | 379 | 3 | 236 | 1.15e-12 | 68.9 |
| Msa1299370 | MtrunA17_Chr5g0415851 | 39.437 | 71 | 43 | 0 | 37 | 107 | 6 | 76 | 3.97e-12 | 62.0 |
| Msa1299370 | MtrunA17_Chr4g0014851 | 39.535 | 86 | 42 | 1 | 25 | 100 | 22 | 107 | 8.02e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299370 | AT5G62680.1 | 61.290 | 372 | 138 | 3 | 11 | 381 | 31 | 397 | 6.00e-164 | 473 |
| Msa1299370 | AT1G18880.1 | 58.511 | 376 | 149 | 3 | 7 | 381 | 2 | 371 | 5.32e-159 | 459 |
| Msa1299370 | AT3G47960.1 | 62.921 | 356 | 128 | 2 | 26 | 381 | 62 | 413 | 4.19e-155 | 451 |
| Msa1299370 | AT1G69870.1 | 46.257 | 374 | 185 | 6 | 12 | 381 | 44 | 405 | 2.25e-113 | 344 |
| Msa1299370 | AT5G28470.1 | 40.616 | 357 | 202 | 2 | 28 | 381 | 20 | 369 | 6.36e-97 | 300 |
| Msa1299370 | AT5G28470.2 | 40.616 | 357 | 202 | 2 | 28 | 381 | 20 | 369 | 7.31e-97 | 299 |
| Msa1299370 | AT1G27080.1 | 42.120 | 368 | 207 | 6 | 16 | 381 | 4 | 367 | 3.87e-95 | 295 |
| Msa1299370 | AT1G27080.2 | 42.249 | 329 | 185 | 5 | 54 | 381 | 1 | 325 | 1.03e-80 | 257 |
| Msa1299370 | AT1G68570.1 | 38.421 | 380 | 223 | 7 | 8 | 381 | 1 | 375 | 5.33e-77 | 249 |
| Msa1299370 | AT1G52190.1 | 34.896 | 384 | 233 | 9 | 8 | 381 | 1 | 377 | 1.09e-74 | 243 |
| Msa1299370 | AT1G69860.1 | 36.649 | 382 | 223 | 5 | 2 | 381 | 3 | 367 | 3.69e-73 | 238 |
| Msa1299370 | AT5G01180.2 | 35.526 | 380 | 236 | 7 | 3 | 381 | 2 | 373 | 3.12e-72 | 236 |
| Msa1299370 | AT5G01180.3 | 35.526 | 380 | 236 | 7 | 3 | 381 | 2 | 373 | 3.12e-72 | 236 |
| Msa1299370 | AT5G01180.1 | 35.526 | 380 | 236 | 7 | 3 | 381 | 2 | 373 | 3.12e-72 | 236 |
| Msa1299370 | AT1G68570.2 | 38.728 | 346 | 206 | 5 | 37 | 381 | 5 | 345 | 7.17e-72 | 234 |
| Msa1299370 | AT3G54140.1 | 35.165 | 364 | 225 | 7 | 18 | 381 | 21 | 373 | 1.48e-71 | 234 |
| Msa1299370 | AT3G54140.2 | 35.165 | 364 | 225 | 7 | 18 | 381 | 21 | 373 | 1.48e-71 | 234 |
| Msa1299370 | AT3G16180.1 | 34.037 | 379 | 236 | 7 | 9 | 381 | 7 | 377 | 3.65e-71 | 233 |
| Msa1299370 | AT1G62200.1 | 36.723 | 354 | 218 | 4 | 29 | 381 | 56 | 404 | 2.85e-70 | 231 |
| Msa1299370 | AT2G02040.1 | 35.714 | 336 | 211 | 3 | 29 | 364 | 45 | 375 | 9.18e-68 | 224 |
| Msa1299370 | AT3G45690.1 | 34.301 | 379 | 223 | 8 | 8 | 381 | 1 | 358 | 8.76e-66 | 218 |
| Msa1299370 | AT3G45680.1 | 33.858 | 381 | 230 | 7 | 7 | 381 | 3 | 367 | 1.10e-65 | 218 |
| Msa1299370 | AT1G62200.2 | 34.555 | 382 | 217 | 6 | 29 | 381 | 56 | 433 | 1.59e-65 | 219 |
| Msa1299370 | AT1G62200.3 | 34.555 | 382 | 217 | 6 | 29 | 381 | 70 | 447 | 2.12e-65 | 219 |
| Msa1299370 | AT3G45660.1 | 33.065 | 372 | 227 | 5 | 12 | 381 | 8 | 359 | 7.03e-64 | 213 |
| Msa1299370 | AT3G45660.3 | 33.065 | 372 | 227 | 5 | 12 | 381 | 8 | 359 | 7.03e-64 | 213 |
| Msa1299370 | AT3G45660.2 | 33.065 | 372 | 227 | 5 | 12 | 381 | 29 | 380 | 9.73e-64 | 214 |
| Msa1299370 | AT3G45650.1 | 32.011 | 378 | 235 | 5 | 6 | 381 | 3 | 360 | 4.80e-63 | 211 |
| Msa1299370 | AT3G45650.2 | 32.011 | 378 | 235 | 5 | 6 | 381 | 3 | 360 | 1.09e-62 | 211 |
| Msa1299370 | AT4G21680.1 | 33.148 | 359 | 232 | 3 | 25 | 381 | 28 | 380 | 4.37e-60 | 204 |
| Msa1299370 | AT3G45720.1 | 32.329 | 365 | 232 | 5 | 20 | 381 | 13 | 365 | 2.93e-59 | 201 |
| Msa1299370 | AT3G54450.1 | 33.420 | 383 | 210 | 8 | 11 | 381 | 2 | 351 | 5.66e-59 | 200 |
| Msa1299370 | AT2G02020.1 | 31.956 | 363 | 199 | 4 | 19 | 381 | 40 | 354 | 4.17e-56 | 192 |
| Msa1299370 | AT5G13400.1 | 32.303 | 356 | 230 | 4 | 15 | 364 | 53 | 403 | 6.94e-56 | 194 |
| Msa1299370 | AT2G37900.1 | 33.803 | 355 | 222 | 8 | 28 | 381 | 41 | 383 | 9.95e-56 | 192 |
| Msa1299370 | AT3G45700.1 | 32.000 | 375 | 236 | 6 | 8 | 381 | 1 | 357 | 1.61e-54 | 188 |
| Msa1299370 | AT1G12110.1 | 31.367 | 373 | 249 | 4 | 12 | 381 | 14 | 382 | 7.27e-54 | 187 |
| Msa1299370 | AT3G45710.1 | 29.679 | 374 | 252 | 4 | 9 | 381 | 5 | 368 | 9.04e-54 | 187 |
| Msa1299370 | AT2G40460.1 | 33.333 | 354 | 218 | 7 | 29 | 381 | 28 | 364 | 2.17e-53 | 186 |
| Msa1299370 | AT2G26690.1 | 34.048 | 373 | 234 | 7 | 11 | 381 | 10 | 372 | 4.11e-53 | 185 |
| Msa1299370 | AT3G53960.1 | 31.888 | 392 | 245 | 8 | 2 | 381 | 4 | 385 | 4.60e-53 | 186 |
| Msa1299370 | AT1G32450.1 | 28.941 | 387 | 264 | 3 | 4 | 381 | 9 | 393 | 2.56e-52 | 184 |
| Msa1299370 | AT1G59740.1 | 30.000 | 380 | 256 | 5 | 5 | 381 | 19 | 391 | 2.61e-52 | 183 |
| Msa1299370 | AT3G21670.1 | 33.611 | 360 | 220 | 6 | 28 | 381 | 32 | 378 | 1.67e-50 | 178 |
| Msa1299370 | AT2G26690.2 | 35.447 | 347 | 212 | 7 | 37 | 381 | 3 | 339 | 3.75e-50 | 177 |
| Msa1299370 | AT5G46040.1 | 27.586 | 377 | 253 | 5 | 10 | 381 | 12 | 373 | 9.88e-50 | 176 |
| Msa1299370 | AT5G19640.1 | 29.944 | 354 | 238 | 4 | 28 | 381 | 62 | 405 | 1.30e-48 | 174 |
| Msa1299370 | AT5G46050.1 | 30.252 | 357 | 236 | 5 | 27 | 381 | 28 | 373 | 2.10e-47 | 170 |
| Msa1299370 | AT2G26690.3 | 35.312 | 337 | 206 | 7 | 47 | 381 | 1 | 327 | 2.90e-47 | 169 |
| Msa1299370 | AT2G37900.2 | 33.119 | 311 | 195 | 8 | 72 | 381 | 6 | 304 | 9.67e-47 | 166 |
| Msa1299370 | AT1G72125.1 | 29.820 | 389 | 233 | 9 | 8 | 381 | 1 | 364 | 9.22e-46 | 165 |
| Msa1299370 | AT1G22570.1 | 30.890 | 382 | 235 | 8 | 8 | 381 | 11 | 371 | 9.51e-45 | 162 |
| Msa1299370 | AT2G02020.2 | 33.591 | 259 | 166 | 2 | 19 | 277 | 40 | 292 | 1.62e-43 | 158 |
| Msa1299370 | AT1G22550.1 | 29.659 | 381 | 237 | 7 | 8 | 381 | 11 | 367 | 2.29e-42 | 156 |
| Msa1299370 | AT1G22570.2 | 31.250 | 352 | 215 | 7 | 36 | 381 | 4 | 334 | 6.33e-41 | 151 |
| Msa1299370 | AT1G33440.1 | 28.941 | 387 | 245 | 9 | 5 | 381 | 16 | 382 | 4.17e-40 | 150 |
| Msa1299370 | AT1G72130.1 | 29.348 | 368 | 215 | 8 | 20 | 381 | 20 | 348 | 2.19e-39 | 147 |
| Msa1299370 | AT1G72120.1 | 27.441 | 379 | 240 | 6 | 9 | 381 | 11 | 360 | 1.34e-38 | 145 |
| Msa1299370 | AT1G22540.1 | 30.914 | 372 | 217 | 9 | 17 | 381 | 22 | 360 | 3.49e-38 | 144 |
| Msa1299370 | AT5G11570.1 | 33.636 | 220 | 138 | 4 | 27 | 243 | 15 | 229 | 1.39e-36 | 139 |
| Msa1299370 | AT1G27040.1 | 28.267 | 375 | 236 | 5 | 17 | 381 | 19 | 370 | 2.26e-36 | 139 |
| Msa1299370 | AT1G27040.2 | 28.267 | 375 | 236 | 5 | 17 | 381 | 15 | 366 | 3.05e-36 | 139 |
| Msa1299370 | AT1G69850.1 | 27.467 | 375 | 258 | 4 | 17 | 381 | 17 | 387 | 8.22e-36 | 138 |
| Msa1299370 | AT1G27040.3 | 28.895 | 353 | 218 | 5 | 39 | 381 | 9 | 338 | 6.19e-34 | 132 |
| Msa1299370 | AT3G25260.1 | 27.056 | 377 | 235 | 10 | 8 | 381 | 3 | 342 | 2.03e-32 | 127 |
| Msa1299370 | AT5G62730.1 | 27.202 | 386 | 209 | 10 | 9 | 364 | 30 | 373 | 2.75e-32 | 128 |
| Msa1299370 | AT1G72140.1 | 26.374 | 364 | 218 | 8 | 28 | 381 | 37 | 360 | 1.84e-31 | 125 |
| Msa1299370 | AT5G62730.2 | 28.161 | 348 | 194 | 8 | 34 | 364 | 6 | 314 | 2.51e-31 | 125 |
| Msa1299370 | AT5G46050.2 | 29.412 | 272 | 180 | 4 | 111 | 381 | 1 | 261 | 2.56e-31 | 124 |
| Msa1299370 | AT1G72130.2 | 29.268 | 246 | 139 | 6 | 142 | 381 | 14 | 230 | 1.64e-24 | 104 |
| Msa1299370 | AT1G72130.3 | 29.268 | 246 | 139 | 6 | 142 | 381 | 14 | 230 | 1.64e-24 | 104 |
| Msa1299370 | AT3G25280.1 | 23.873 | 377 | 244 | 11 | 8 | 379 | 1 | 339 | 5.09e-23 | 100 |
| Msa1299370 | AT3G01350.1 | 25.905 | 359 | 222 | 8 | 42 | 381 | 24 | 357 | 3.67e-22 | 98.6 |
| Msa1299370 | AT5G14940.1 | 26.404 | 356 | 218 | 10 | 42 | 381 | 24 | 351 | 4.06e-21 | 95.5 |
| Msa1299370 | AT2G38100.1 | 25.378 | 331 | 213 | 10 | 49 | 375 | 14 | 314 | 3.10e-19 | 89.7 |
| Msa1299370 | AT2G38100.3 | 25.378 | 331 | 213 | 10 | 49 | 375 | 20 | 320 | 3.85e-19 | 89.4 |
| Msa1299370 | AT2G38100.2 | 25.076 | 327 | 211 | 10 | 53 | 375 | 2 | 298 | 7.25e-19 | 88.6 |
Find 80 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCACATTTGCTTCCTTTC+TGG | 0.050423 | 8_3:-60514051 | Msa1299370:intron |
| CTTCTTTCATTTCCACATTT+TGG | 0.089475 | 8_3:+60513508 | None:intergenic |
| TTTCTATGTGATACTTATTT+TGG | 0.126920 | 8_3:-60514095 | Msa1299370:CDS |
| GTTCTACCAATTTGGGTTTC+AGG | 0.174285 | 8_3:-60511395 | Msa1299370:CDS |
| TAGTAAGAGTTCTACCAATT+TGG | 0.200123 | 8_3:-60511403 | Msa1299370:CDS |
| TCATTTCTACTACTTGGATT+TGG | 0.222031 | 8_3:-60513454 | Msa1299370:CDS |
| TTTGAAATTTGTGTTGAAAA+AGG | 0.232339 | 8_3:+60511301 | Msa1299360:intron |
| AAGACTTCTTCCTAAGGTTT+TGG | 0.237682 | 8_3:+60514517 | None:intergenic |
| CATTTCTACTACTTGGATTT+GGG | 0.250805 | 8_3:-60513453 | Msa1299370:CDS |
| TTCTTTCCTGAATCTGTGTT+TGG | 0.257557 | 8_3:+60513364 | None:intergenic |
| ACTTGAACAATATTTGTTAC+AGG | 0.278311 | 8_3:+60513142 | Msa1299360:intron |
| ATCTTGCTTACCAATGATAA+AGG | 0.299967 | 8_3:+60514357 | None:intergenic |
| AGTAAGAGTTCTACCAATTT+GGG | 0.305859 | 8_3:-60511402 | Msa1299370:CDS |
| TTCAATCCAAACACAGATTC+AGG | 0.309118 | 8_3:-60513370 | Msa1299370:CDS |
| GATTCATGGGATGATATTAA+AGG | 0.329295 | 8_3:+60514558 | None:intergenic |
| ATTGATTGATTCATGATTCA+TGG | 0.332191 | 8_3:+60514544 | None:intergenic |
| AAACTAGTTATTTAATAAGT+TGG | 0.336457 | 8_3:-60514483 | Msa1299370:five_prime_UTR |
| CAAATGTCATTTCTACTACT+TGG | 0.348911 | 8_3:-60513460 | Msa1299370:CDS |
| AGACCTTGTAACTTAGCATT+TGG | 0.352308 | 8_3:-60513403 | Msa1299370:CDS |
| TTTCTCATACACCTCAGTTC+AGG | 0.371042 | 8_3:-60513012 | Msa1299370:intron |
| CTTGGTCTTGGAATTCCTGC+TGG | 0.371692 | 8_3:-60513238 | Msa1299370:CDS |
| GTGAGTTGGGCTCTTGGTCT+TGG | 0.384641 | 8_3:-60513250 | Msa1299370:CDS |
| TCATGTGTTGTTTATTTCAC+TGG | 0.387143 | 8_3:-60513202 | Msa1299370:CDS |
| GGATTTGGGCTTATGATAGT+AGG | 0.391869 | 8_3:-60513439 | Msa1299370:CDS |
| GAACAAAAGAGACACATCTA+TGG | 0.397086 | 8_3:-60514452 | Msa1299370:CDS |
| TTTGGACGCTACAAAACTCT+TGG | 0.399400 | 8_3:-60514077 | Msa1299370:CDS |
| GAATCAATAGTTTCTTCAAT+TGG | 0.404560 | 8_3:-60513339 | Msa1299370:CDS |
| AGTATGCCTGAAACCCAAAT+TGG | 0.407025 | 8_3:+60511389 | Msa1299360:intron |
| AATATTGTCAATATCTTCAA+TGG | 0.418148 | 8_3:-60514149 | Msa1299370:CDS |
| AATGACATTTGTCCTGTACT+TGG | 0.433383 | 8_3:+60513472 | None:intergenic |
| GAAGATATTGACAATATTTG+TGG | 0.433489 | 8_3:+60514154 | None:intergenic |
| TATACAAGTAAATGTGAGTT+GGG | 0.433642 | 8_3:-60513263 | Msa1299370:CDS |
| AGCTTGGTGTTGATAGAGTA+AGG | 0.434780 | 8_3:+60513034 | Msa1299360:intron |
| AAGGTCATGCCCTTTATCAT+TGG | 0.435084 | 8_3:-60514367 | Msa1299370:intron |
| GGATCAGATGCAGAACCGTC+AGG | 0.440378 | 8_3:+60511470 | Msa1299360:intron |
| ATCAATAATTCCAAAACCTT+AGG | 0.459761 | 8_3:-60514527 | Msa1299370:five_prime_UTR |
| TATGTGAAGGTAAAAGCAAC+AGG | 0.472904 | 8_3:-60513169 | Msa1299370:CDS |
| CTTATGATAGTAGGAGCTGC+AGG | 0.479508 | 8_3:-60513430 | Msa1299370:CDS |
| GTAAATGTGAGTTGGGCTCT+TGG | 0.482055 | 8_3:-60513256 | Msa1299370:CDS |
| TTCGGTCCGATTGAAGTGCT+TGG | 0.491406 | 8_3:+60511324 | Msa1299360:intron |
| TCTTGCTTACCAATGATAAA+GGG | 0.492775 | 8_3:+60514358 | None:intergenic |
| AACACAGATTCAGGAAAGAA+AGG | 0.495614 | 8_3:-60513361 | Msa1299370:CDS |
| GTTTCAAATAACAACTATAG+AGG | 0.503860 | 8_3:-60514394 | Msa1299370:CDS |
| AGTCTTCCAAGCACTTCAAT+CGG | 0.504676 | 8_3:-60511330 | Msa1299370:CDS |
| AGAATAAAGACTTCTTCCTA+AGG | 0.505649 | 8_3:+60514511 | None:intergenic |
| AGACTAACACTGTGTTCTGT+TGG | 0.513814 | 8_3:+60511348 | Msa1299360:intron |
| TATATGTGGCTATAAAGAAA+AGG | 0.514570 | 8_3:-60513117 | Msa1299370:CDS |
| TTGATTGATTCATGATTCAT+GGG | 0.518818 | 8_3:+60514545 | None:intergenic |
| TTTGAGAAGCTAGGAGCCAT+TGG | 0.519801 | 8_3:-60514236 | Msa1299370:CDS |
| GAAAAGTGACAAAGAAAGTG+TGG | 0.527633 | 8_3:-60514428 | Msa1299370:CDS |
| ATATACAAGTAAATGTGAGT+TGG | 0.529836 | 8_3:-60513264 | Msa1299370:CDS |
| ACGGTTCTGCATCTGATCCA+TGG | 0.542827 | 8_3:-60511466 | Msa1299370:CDS |
| TGTTATAATTGATACCAGAA+AGG | 0.546328 | 8_3:+60514037 | None:intergenic |
| GCTCCAAATGCTAAGTTACA+AGG | 0.548040 | 8_3:+60513400 | None:intergenic |
| AATGAAACATTTGAGAAGCT+AGG | 0.548041 | 8_3:-60514245 | Msa1299370:CDS |
| GAAACTCAATCTACAAGAAG+AGG | 0.560510 | 8_3:-60513095 | Msa1299370:CDS |
| CTGAGGTGTATGAGAAAGCT+TGG | 0.564035 | 8_3:+60513018 | Msa1299360:intron |
| AACCATTTGTGCAAAAGTGA+AGG | 0.567355 | 8_3:+60513306 | None:intergenic |
| TTGTGGCTGTAATACTGCTA+AGG | 0.568792 | 8_3:+60514171 | None:intergenic |
| CAAATAACAACTATAGAGGA+TGG | 0.573016 | 8_3:-60514390 | Msa1299370:CDS |
| TTATAATAGCTGCTTTGTCA+AGG | 0.575374 | 8_3:+60511513 | Msa1299360:intron |
| GAGGTTTGCTAAGGTACCAA+TGG | 0.582527 | 8_3:+60514220 | None:intergenic |
| TAACAACTATAGAGGATGGA+AGG | 0.588536 | 8_3:-60514386 | Msa1299370:CDS |
| TATTGTTCAAGTGATATATG+TGG | 0.591824 | 8_3:-60513131 | Msa1299370:CDS |
| TCTTTGCAGTATACAACAAG+TGG | 0.592491 | 8_3:-60511441 | Msa1299370:CDS |
| TTGTTATACAACTAACAGCA+TGG | 0.599941 | 8_3:-60513549 | Msa1299370:CDS |
| GAAAACAGCATCAAACCAGC+AGG | 0.602141 | 8_3:+60513223 | None:intergenic |
| AGCATGCATCCACCAAAATG+TGG | 0.602631 | 8_3:-60513520 | Msa1299370:CDS |
| ACATGCATAGAACCAAGTAC+AGG | 0.603457 | 8_3:-60513484 | Msa1299370:CDS |
| TGGAAGTAAATATTATGTGA+AGG | 0.605535 | 8_3:-60513182 | Msa1299370:CDS |
| TGGTACCTTAGCAAACCTCT+TGG | 0.621497 | 8_3:-60514216 | Msa1299370:CDS |
| ATAGACCAAGAGGTTTGCTA+AGG | 0.624994 | 8_3:+60514211 | None:intergenic |
| ACATAGAAAAGCTCCTAGCA+AGG | 0.626725 | 8_3:+60514109 | None:intergenic |
| GATCAGATGCAGAACCGTCA+GGG | 0.627732 | 8_3:+60511471 | Msa1299360:intron |
| TGTATACTGCAAAGATACCA+TGG | 0.632561 | 8_3:+60511449 | Msa1299360:intron |
| TTATGATAGTAGGAGCTGCA+GGG | 0.663873 | 8_3:-60513429 | Msa1299370:CDS |
| CTGTTGTAAGATAGACCAAG+AGG | 0.671779 | 8_3:+60514201 | None:intergenic |
| CAAGACAAAATAAACCCTGA+CGG | 0.679950 | 8_3:-60511485 | Msa1299370:CDS |
| TCATGGGATGATATTAAAGG+CGG | 0.684136 | 8_3:+60514561 | None:intergenic |
| ATTAGTGGTTACCTGAACTG+AGG | 0.728477 | 8_3:+60513001 | Msa1299360:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTTGAATATTGTTTA+AGG | - | chr8_3:60512042-60512061 | Msa1299370:intron | 10.0% |
| !! | CTTATAAAATACAATTTAAT+TGG | - | chr8_3:60512951-60512970 | Msa1299370:intron | 10.0% |
| !! | AAAGAGTAATAAATATTTAA+AGG | + | chr8_3:60513437-60513456 | None:intergenic | 10.0% |
| !! | AAACTAGTTATTTAATAAGT+TGG | - | chr8_3:60511379-60511398 | Msa1299370:CDS | 15.0% |
| !! | AATTAGTTGAATATTGTTTA+AGG | + | chr8_3:60512157-60512176 | Msa1299360:intron | 15.0% |
| !!! | GTAAAAAATTATTTCTGATA+CGG | + | chr8_3:60512908-60512927 | Msa1299360:intron | 15.0% |
| !! | TTACTTGAAATTAAGTTAAA+GGG | - | chr8_3:60513261-60513280 | Msa1299370:CDS | 15.0% |
| !!! | ACAAAATTATTTTTCGTTAA+TGG | + | chr8_3:60513493-60513512 | None:intergenic | 15.0% |
| !! | TTATTCAAATAAGATAAACA+TGG | + | chr8_3:60513857-60513876 | None:intergenic | 15.0% |
| !!! | ACTATTTTCAATAAACTATT+TGG | - | chr8_3:60513877-60513896 | Msa1299370:intron | 15.0% |
| !!! | CTATTTTCAATAAACTATTT+GGG | - | chr8_3:60513878-60513897 | Msa1299370:intron | 15.0% |
| !! | TCTATTATCAAATAGAATTT+GGG | + | chr8_3:60513905-60513924 | None:intergenic | 15.0% |
| !! | TTCTATTATCAAATAGAATT+TGG | + | chr8_3:60513906-60513925 | None:intergenic | 15.0% |
| !!! | CTATTTTTGTAATCAAATTA+AGG | + | chr8_3:60514021-60514040 | None:intergenic | 15.0% |
| !! | TATAAAAATGTGTTAATAAG+TGG | + | chr8_3:60514218-60514237 | None:intergenic | 15.0% |
| !! | AATATTGTCAATATCTTCAA+TGG | - | chr8_3:60511713-60511732 | Msa1299370:intron | 20.0% |
| !!! | TTTCTATGTGATACTTATTT+TGG | - | chr8_3:60511767-60511786 | Msa1299370:intron | 20.0% |
| !!! | ACAAGTTAATTATGATTTGT+TGG | + | chr8_3:60512129-60512148 | Msa1299360:intron | 20.0% |
| !!! | AATTTAATTGGCTTATTTGT+TGG | - | chr8_3:60512963-60512982 | Msa1299370:intron | 20.0% |
| !! | GACATAAAAAAAGATAATAG+AGG | - | chr8_3:60513232-60513251 | Msa1299370:CDS | 20.0% |
| !! | GTTACTTGAAATTAAGTTAA+AGG | - | chr8_3:60513260-60513279 | Msa1299370:CDS | 20.0% |
| !!! | TTATTTTTCGTTAATGGTAT+TGG | + | chr8_3:60513487-60513506 | None:intergenic | 20.0% |
| !! | CTATTATCAAATAGAATTTG+GGG | + | chr8_3:60513904-60513923 | None:intergenic | 20.0% |
| !! | TATATATCTGTGTGTTTATA+TGG | - | chr8_3:60513932-60513951 | Msa1299370:intron | 20.0% |
| !! | TTGTAATCAAATTAAGGTTA+AGG | + | chr8_3:60514015-60514034 | None:intergenic | 20.0% |
| !! | CTCATATTATCTTAGAATTT+AGG | - | chr8_3:60514142-60514161 | Msa1299370:CDS | 20.0% |
| !! | TCTAATTTAACCAACAAAAT+CGG | - | chr8_3:60514170-60514189 | Msa1299370:CDS | 20.0% |
| !! | TTTATGAAGAAATCAACAAA+TGG | + | chr8_3:60514291-60514310 | None:intergenic | 20.0% |
| !! | TGATTTCTTCATAAAATGAT+TGG | - | chr8_3:60514296-60514315 | Msa1299370:intron | 20.0% |
| !! | AAATGTTCATATGAATTAAC+AGG | - | chr8_3:60514324-60514343 | Msa1299370:intron | 20.0% |
| !!! | TTTGAAATTTGTGTTGAAAA+AGG | + | chr8_3:60514564-60514583 | None:intergenic | 20.0% |
| !! | TTGATTGATTCATGATTCAT+GGG | + | chr8_3:60511320-60511339 | Msa1299360:intron | 25.0% |
| !! | ATTGATTGATTCATGATTCA+TGG | + | chr8_3:60511321-60511340 | Msa1299360:intron | 25.0% |
| ! | ATCAATAATTCCAAAACCTT+AGG | - | chr8_3:60511335-60511354 | Msa1299370:CDS | 25.0% |
| ! | GTTTCAAATAACAACTATAG+AGG | - | chr8_3:60511468-60511487 | Msa1299370:CDS | 25.0% |
| ! | AATAATAAGAGTAACATGCA+TGG | + | chr8_3:60511547-60511566 | Msa1299360:intron | 25.0% |
| !!! | AATTAATTTGCATATCATGC+AGG | - | chr8_3:60511593-60511612 | Msa1299370:intron | 25.0% |
| ! | GAAGATATTGACAATATTTG+TGG | + | chr8_3:60511711-60511730 | Msa1299360:intron | 25.0% |
| ! | TGTTATAATTGATACCAGAA+AGG | + | chr8_3:60511828-60511847 | Msa1299360:intron | 25.0% |
| ! | GTGATCAAATACATATGATA+TGG | + | chr8_3:60511994-60512013 | Msa1299360:intron | 25.0% |
| !! | TTTAACTAGTTAGCTTAGTT+AGG | + | chr8_3:60512098-60512117 | Msa1299360:intron | 25.0% |
| !!! | TAACTCTTTGATTTTGAAAC+AGG | - | chr8_3:60512284-60512303 | Msa1299370:intron | 25.0% |
| !!! | AACTCTTTGATTTTGAAACA+GGG | - | chr8_3:60512285-60512304 | Msa1299370:intron | 25.0% |
| ! | GAATCAATAGTTTCTTCAAT+TGG | - | chr8_3:60512523-60512542 | Msa1299370:intron | 25.0% |
| ! | ATATACAAGTAAATGTGAGT+TGG | - | chr8_3:60512598-60512617 | Msa1299370:intron | 25.0% |
| ! | TATACAAGTAAATGTGAGTT+GGG | - | chr8_3:60512599-60512618 | Msa1299370:intron | 25.0% |
| ! | TGGAAGTAAATATTATGTGA+AGG | - | chr8_3:60512680-60512699 | Msa1299370:intron | 25.0% |
| !! | ACTTGAACAATATTTGTTAC+AGG | + | chr8_3:60512723-60512742 | Msa1299360:intron | 25.0% |
| ! | TATTGTTCAAGTGATATATG+TGG | - | chr8_3:60512731-60512750 | Msa1299370:intron | 25.0% |
| ! | TATATGTGGCTATAAAGAAA+AGG | - | chr8_3:60512745-60512764 | Msa1299370:intron | 25.0% |
| ! | TGACGTAAAAAGAAAATGAT+GGG | + | chr8_3:60513036-60513055 | Msa1299360:intron | 25.0% |
| ! | ATGACGTAAAAAGAAAATGA+TGG | + | chr8_3:60513037-60513056 | Msa1299360:intron | 25.0% |
| ! | AAAAATGTGTTAATAAGTGG+TGG | + | chr8_3:60514215-60514234 | None:intergenic | 25.0% |
| ! | AATTTGTGTTGAAAAAGGTT+CGG | + | chr8_3:60514559-60514578 | None:intergenic | 25.0% |
| GATTCATGGGATGATATTAA+AGG | + | chr8_3:60511307-60511326 | Msa1299360:intron | 30.0% | |
| AGAATAAAGACTTCTTCCTA+AGG | + | chr8_3:60511354-60511373 | Msa1299360:intron | 30.0% | |
| CAAATAACAACTATAGAGGA+TGG | - | chr8_3:60511472-60511491 | Msa1299370:CDS | 30.0% | |
| TCTTGCTTACCAATGATAAA+GGG | + | chr8_3:60511507-60511526 | Msa1299360:intron | 30.0% | |
| ATCTTGCTTACCAATGATAA+AGG | + | chr8_3:60511508-60511527 | Msa1299360:intron | 30.0% | |
| AATGAAACATTTGAGAAGCT+AGG | - | chr8_3:60511617-60511636 | Msa1299370:intron | 30.0% | |
| AATTTGAATCTCTTCAGAGA+TGG | - | chr8_3:60512212-60512231 | Msa1299370:intron | 30.0% | |
| !!! | ACTCTTTGATTTTGAAACAG+GGG | - | chr8_3:60512286-60512305 | Msa1299370:intron | 30.0% |
| TTGTTATACAACTAACAGCA+TGG | - | chr8_3:60512313-60512332 | Msa1299370:intron | 30.0% | |
| ! | CTTCTTTCATTTCCACATTT+TGG | + | chr8_3:60512357-60512376 | Msa1299360:intron | 30.0% |
| ! | CAAATGTCATTTCTACTACT+TGG | - | chr8_3:60512402-60512421 | Msa1299370:intron | 30.0% |
| TCATTTCTACTACTTGGATT+TGG | - | chr8_3:60512408-60512427 | Msa1299370:intron | 30.0% | |
| CATTTCTACTACTTGGATTT+GGG | - | chr8_3:60512409-60512428 | Msa1299370:intron | 30.0% | |
| !! | TCATGTGTTGTTTATTTCAC+TGG | - | chr8_3:60512660-60512679 | Msa1299370:intron | 30.0% |
| ! | AAATACTCGACATTGATTAG+TGG | + | chr8_3:60512879-60512898 | Msa1299360:intron | 30.0% |
| !! | TCATATGCAAACGGATTAAA+AGG | + | chr8_3:60513066-60513085 | Msa1299360:intron | 30.0% |
| CTTGAAAGTTCATATGCAAA+CGG | + | chr8_3:60513075-60513094 | Msa1299360:intron | 30.0% | |
| ACGTCAAGAGAACTAAATAA+AGG | + | chr8_3:60513629-60513648 | None:intergenic | 30.0% | |
| !! | TTTATTTAGTTCTCTTGACG+TGG | - | chr8_3:60513628-60513647 | Msa1299370:intron | 30.0% |
| !! | TTATTTAGTTCTCTTGACGT+GGG | - | chr8_3:60513629-60513648 | Msa1299370:intron | 30.0% |
| ACACTTGCACAAATATGTAT+CGG | + | chr8_3:60513789-60513808 | None:intergenic | 30.0% | |
| ATACATATTTGTGCAAGTGT+TGG | - | chr8_3:60513789-60513808 | Msa1299370:intron | 30.0% | |
| ! | TTATAATAGCTGCTTTGTCA+AGG | + | chr8_3:60514352-60514371 | None:intergenic | 30.0% |
| TAGTAAGAGTTCTACCAATT+TGG | - | chr8_3:60514459-60514478 | Msa1299370:exon | 30.0% | |
| AGTAAGAGTTCTACCAATTT+GGG | - | chr8_3:60514460-60514479 | Msa1299370:exon | 30.0% | |
| TCATGGGATGATATTAAAGG+CGG | + | chr8_3:60511304-60511323 | Msa1299360:intron | 35.0% | |
| ! | AAGACTTCTTCCTAAGGTTT+TGG | + | chr8_3:60511348-60511367 | Msa1299360:intron | 35.0% |
| GAACAAAAGAGACACATCTA+TGG | - | chr8_3:60511410-60511429 | Msa1299370:CDS | 35.0% | |
| GAAAAGTGACAAAGAAAGTG+TGG | - | chr8_3:60511434-60511453 | Msa1299370:CDS | 35.0% | |
| TAACAACTATAGAGGATGGA+AGG | - | chr8_3:60511476-60511495 | Msa1299370:CDS | 35.0% | |
| ! | CTTTCATTTCCACATTTTGG+TGG | + | chr8_3:60512354-60512373 | Msa1299360:intron | 35.0% |
| AATGACATTTGTCCTGTACT+TGG | + | chr8_3:60512393-60512412 | Msa1299360:intron | 35.0% | |
| AGACCTTGTAACTTAGCATT+TGG | - | chr8_3:60512459-60512478 | Msa1299370:intron | 35.0% | |
| TTCAATCCAAACACAGATTC+AGG | - | chr8_3:60512492-60512511 | Msa1299370:intron | 35.0% | |
| TTCTTTCCTGAATCTGTGTT+TGG | + | chr8_3:60512501-60512520 | Msa1299360:intron | 35.0% | |
| AACACAGATTCAGGAAAGAA+AGG | - | chr8_3:60512501-60512520 | Msa1299370:intron | 35.0% | |
| !! | TACCTTCACTTTTGCACAAA+TGG | - | chr8_3:60512554-60512573 | Msa1299370:intron | 35.0% |
| AACCATTTGTGCAAAAGTGA+AGG | + | chr8_3:60512559-60512578 | Msa1299360:intron | 35.0% | |
| TATGTGAAGGTAAAAGCAAC+AGG | - | chr8_3:60512693-60512712 | Msa1299370:intron | 35.0% | |
| GAAACTCAATCTACAAGAAG+AGG | - | chr8_3:60512767-60512786 | Msa1299370:intron | 35.0% | |
| GTATCTTGTCTTTATCCTGT+TGG | + | chr8_3:60513010-60513029 | Msa1299360:intron | 35.0% | |
| ! | AAGGGCGACAAAAGTAATTT+TGG | - | chr8_3:60513279-60513298 | Msa1299370:CDS | 35.0% |
| AAGCGACTTATAAGAAAGGA+GGG | + | chr8_3:60513339-60513358 | None:intergenic | 35.0% | |
| AAAGCGACTTATAAGAAAGG+AGG | + | chr8_3:60513340-60513359 | None:intergenic | 35.0% | |
| TCCTTTCTTATAAGTCGCTT+TGG | - | chr8_3:60513339-60513358 | Msa1299370:CDS | 35.0% | |
| ! | CCTTTCTTATAAGTCGCTTT+GGG | - | chr8_3:60513340-60513359 | Msa1299370:CDS | 35.0% |
| !!! | GAATTTTAAGTGTCGGTAGT+TGG | + | chr8_3:60513763-60513782 | None:intergenic | 35.0% |
| !! | TCGGTTGGAATTTTAAGTGT+CGG | + | chr8_3:60513770-60513789 | None:intergenic | 35.0% |
| ! | TTGCACAAATATGTATCGGT+TGG | + | chr8_3:60513785-60513804 | None:intergenic | 35.0% |
| !! | ATATTTGTGCAAGTGTTGGT+TGG | - | chr8_3:60513793-60513812 | Msa1299370:intron | 35.0% |
| !! | ACTATACAAGCCGATTTTGT+TGG | + | chr8_3:60514183-60514202 | None:intergenic | 35.0% |
| !!! | AGGGTTTATTTTGTCTTGTG+GGG | + | chr8_3:60514375-60514394 | None:intergenic | 35.0% |
| !!! | CAGGGTTTATTTTGTCTTGT+GGG | + | chr8_3:60514376-60514395 | None:intergenic | 35.0% |
| !!! | TCAGGGTTTATTTTGTCTTG+TGG | + | chr8_3:60514377-60514396 | None:intergenic | 35.0% |
| CAAGACAAAATAAACCCTGA+CGG | - | chr8_3:60514377-60514396 | Msa1299370:CDS | 35.0% | |
| TGTATACTGCAAAGATACCA+TGG | + | chr8_3:60514416-60514435 | None:intergenic | 35.0% | |
| TCTTTGCAGTATACAACAAG+TGG | - | chr8_3:60514421-60514440 | Msa1299370:CDS | 35.0% | |
| AAGGTCATGCCCTTTATCAT+TGG | - | chr8_3:60511495-60511514 | Msa1299370:CDS | 40.0% | |
| !! | ATAGACCAAGAGGTTTGCTA+AGG | + | chr8_3:60511654-60511673 | Msa1299360:intron | 40.0% |
| CTGTTGTAAGATAGACCAAG+AGG | + | chr8_3:60511664-60511683 | Msa1299360:intron | 40.0% | |
| TTGTGGCTGTAATACTGCTA+AGG | + | chr8_3:60511694-60511713 | Msa1299360:intron | 40.0% | |
| ACATAGAAAAGCTCCTAGCA+AGG | + | chr8_3:60511756-60511775 | Msa1299360:intron | 40.0% | |
| TTTGGACGCTACAAAACTCT+TGG | - | chr8_3:60511785-60511804 | Msa1299370:intron | 40.0% | |
| CTAATTCGTCAACGTCAACA+AGG | - | chr8_3:60512171-60512190 | Msa1299370:intron | 40.0% | |
| ACATGCATAGAACCAAGTAC+AGG | - | chr8_3:60512378-60512397 | Msa1299370:intron | 40.0% | |
| GGATTTGGGCTTATGATAGT+AGG | - | chr8_3:60512423-60512442 | Msa1299370:intron | 40.0% | |
| TTATGATAGTAGGAGCTGCA+GGG | - | chr8_3:60512433-60512452 | Msa1299370:intron | 40.0% | |
| GCTCCAAATGCTAAGTTACA+AGG | + | chr8_3:60512465-60512484 | Msa1299360:intron | 40.0% | |
| !! | AGCTTGGTGTTGATAGAGTA+AGG | + | chr8_3:60512831-60512850 | Msa1299360:intron | 40.0% |
| TTTCTCATACACCTCAGTTC+AGG | - | chr8_3:60512850-60512869 | Msa1299370:intron | 40.0% | |
| ATTAGTGGTTACCTGAACTG+AGG | + | chr8_3:60512864-60512883 | Msa1299360:intron | 40.0% | |
| CCCAAAGCGACTTATAAGAA+AGG | + | chr8_3:60513343-60513362 | None:intergenic | 40.0% | |
| AACTCATTCGACGAACCAAT+TGG | + | chr8_3:60514111-60514130 | None:intergenic | 40.0% | |
| !! | CAAAATCGGCTTGTATAGTG+AGG | - | chr8_3:60514184-60514203 | Msa1299370:CDS | 40.0% |
| ! | GTTCTACCAATTTGGGTTTC+AGG | - | chr8_3:60514467-60514486 | Msa1299370:exon | 40.0% |
| AGTATGCCTGAAACCCAAAT+TGG | + | chr8_3:60514476-60514495 | None:intergenic | 40.0% | |
| AGACTAACACTGTGTTCTGT+TGG | + | chr8_3:60514517-60514536 | None:intergenic | 40.0% | |
| AGTCTTCCAAGCACTTCAAT+CGG | - | chr8_3:60514532-60514551 | Msa1299370:five_prime_UTR | 40.0% | |
| TTTGAGAAGCTAGGAGCCAT+TGG | - | chr8_3:60511626-60511645 | Msa1299370:intron | 45.0% | |
| !! | GAGGTTTGCTAAGGTACCAA+TGG | + | chr8_3:60511645-60511664 | Msa1299360:intron | 45.0% |
| TGGTACCTTAGCAAACCTCT+TGG | - | chr8_3:60511646-60511665 | Msa1299370:intron | 45.0% | |
| CTGCACATTTGCTTCCTTTC+TGG | - | chr8_3:60511811-60511830 | Msa1299370:intron | 45.0% | |
| !! | CGTCAACAAGGTGTTACTTC+AGG | - | chr8_3:60512183-60512202 | Msa1299370:intron | 45.0% |
| AGCATGCATCCACCAAAATG+TGG | - | chr8_3:60512342-60512361 | Msa1299370:intron | 45.0% | |
| CTTATGATAGTAGGAGCTGC+AGG | - | chr8_3:60512432-60512451 | Msa1299370:intron | 45.0% | |
| ! | GTAAATGTGAGTTGGGCTCT+TGG | - | chr8_3:60512606-60512625 | Msa1299370:intron | 45.0% |
| GAAAACAGCATCAAACCAGC+AGG | + | chr8_3:60512642-60512661 | Msa1299360:intron | 45.0% | |
| CTGAGGTGTATGAGAAAGCT+TGG | + | chr8_3:60512847-60512866 | Msa1299360:intron | 45.0% | |
| ACGACTAAAGCGTGACCAAT+TGG | - | chr8_3:60514093-60514112 | Msa1299370:CDS | 45.0% | |
| !!! | ATAATTTTTTACTATTTAAT+TGG | - | chr8_3:60512916-60512935 | Msa1299370:intron | 5.0% |
| ! | GCTAGTCTAGCTACCTTGCT+AGG | - | chr8_3:60511740-60511759 | Msa1299370:intron | 50.0% |
| GTACTACAATCGCGCTGTCA+AGG | - | chr8_3:60511937-60511956 | Msa1299370:intron | 50.0% | |
| !! | CTTGGTCTTGGAATTCCTGC+TGG | - | chr8_3:60512624-60512643 | Msa1299370:intron | 50.0% |
| TAGAAACTGCGAGCACCAAC+AGG | - | chr8_3:60512992-60513011 | Msa1299370:intron | 50.0% | |
| GATCAGATGCAGAACCGTCA+GGG | + | chr8_3:60514394-60514413 | None:intergenic | 50.0% | |
| ACGGTTCTGCATCTGATCCA+TGG | - | chr8_3:60514396-60514415 | Msa1299370:CDS | 50.0% | |
| ! | TTCGGTCCGATTGAAGTGCT+TGG | + | chr8_3:60514541-60514560 | None:intergenic | 50.0% |
| TGATATGGTCGTGAGTCGCG+AGG | + | chr8_3:60511979-60511998 | Msa1299360:intron | 55.0% | |
| ! | GTGAGTTGGGCTCTTGGTCT+TGG | - | chr8_3:60512612-60512631 | Msa1299370:intron | 55.0% |
| GGATCAGATGCAGAACCGTC+AGG | + | chr8_3:60514395-60514414 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 60511289 | 60514595 | 60511289 | ID=Msa1299370;Name=Msa1299370 |
| chr8_3 | mRNA | 60511289 | 60514595 | 60511289 | ID=Msa1299370-mRNA-1;Parent=Msa1299370;Name=Msa1299370-mRNA-1;_AED=0.05;_eAED=0.05;_QI=119|1|0.75|1|0.66|0.5|4|0|381 |
| chr8_3 | exon | 60511289 | 60511538 | 60511289 | ID=Msa1299370-mRNA-1:exon:17709;Parent=Msa1299370-mRNA-1 |
| chr8_3 | exon | 60513013 | 60513578 | 60513013 | ID=Msa1299370-mRNA-1:exon:17708;Parent=Msa1299370-mRNA-1 |
| chr8_3 | exon | 60514052 | 60514269 | 60514052 | ID=Msa1299370-mRNA-1:exon:17707;Parent=Msa1299370-mRNA-1 |
| chr8_3 | exon | 60514368 | 60514595 | 60514368 | ID=Msa1299370-mRNA-1:exon:17706;Parent=Msa1299370-mRNA-1 |
| chr8_3 | five_prime_UTR | 60514477 | 60514595 | 60514477 | ID=Msa1299370-mRNA-1:five_prime_utr;Parent=Msa1299370-mRNA-1 |
| chr8_3 | CDS | 60514368 | 60514476 | 60514368 | ID=Msa1299370-mRNA-1:cds;Parent=Msa1299370-mRNA-1 |
| chr8_3 | CDS | 60514052 | 60514269 | 60514052 | ID=Msa1299370-mRNA-1:cds;Parent=Msa1299370-mRNA-1 |
| chr8_3 | CDS | 60513013 | 60513578 | 60513013 | ID=Msa1299370-mRNA-1:cds;Parent=Msa1299370-mRNA-1 |
| chr8_3 | CDS | 60511289 | 60511538 | 60511289 | ID=Msa1299370-mRNA-1:cds;Parent=Msa1299370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
