Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0688770 | XP_003606464.1 | 97.872 | 94 | 2 | 0 | 1 | 94 | 1 | 94 | 6.89e-61 | 190 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0688770 | G7JQH1 | 97.872 | 94 | 2 | 0 | 1 | 94 | 1 | 94 | 3.29e-61 | 190 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0688770 | 0.803870 | 2.835342e-49 | -8.615850e-47 |
| Msa0001590 | Msa0688770 | 0.802777 | 4.776344e-49 | -8.615850e-47 |
| Msa0001780 | Msa0688770 | 0.810451 | 1.145457e-50 | -8.615850e-47 |
| Msa0003700 | Msa0688770 | 0.816476 | 5.422047e-52 | -8.615850e-47 |
| Msa0017510 | Msa0688770 | 0.863502 | 2.378020e-64 | -8.615850e-47 |
| Msa0028640 | Msa0688770 | 0.819154 | 1.347700e-52 | -8.615850e-47 |
| Msa0029880 | Msa0688770 | 0.811492 | 6.814532e-51 | -8.615850e-47 |
| Msa0029890 | Msa0688770 | 0.811421 | 7.062412e-51 | -8.615850e-47 |
| Msa0037700 | Msa0688770 | 0.816921 | 4.309056e-52 | -8.615850e-47 |
| Msa0040450 | Msa0688770 | 0.825537 | 4.441639e-54 | -8.615850e-47 |
| Msa0046100 | Msa0688770 | 0.806549 | 7.792477e-50 | -8.615850e-47 |
| Msa0047050 | Msa0688770 | 0.802059 | 6.715419e-49 | -8.615850e-47 |
| Msa0053780 | Msa0688770 | 0.801596 | 8.355096e-49 | -8.615850e-47 |
| Msa0063890 | Msa0688770 | 0.801582 | 8.411441e-49 | -8.615850e-47 |
| Msa0064560 | Msa0688770 | 0.819736 | 9.930306e-53 | -8.615850e-47 |
| Msa0077140 | Msa0688770 | 0.808411 | 3.138180e-50 | -8.615850e-47 |
| Msa0101440 | Msa0688770 | 0.805215 | 1.486488e-49 | -8.615850e-47 |
| Msa0110970 | Msa0688770 | 0.853331 | 2.565305e-61 | -8.615850e-47 |
| Msa0120400 | Msa0688770 | 0.800197 | 1.613543e-48 | -8.615850e-47 |
| Msa0608620 | Msa0688770 | 0.810822 | 9.519844e-51 | -8.615850e-47 |
| Msa0631200 | Msa0688770 | 0.802564 | 5.283547e-49 | -8.615850e-47 |
| Msa0642820 | Msa0688770 | 0.817846 | 2.668465e-52 | -8.615850e-47 |
| Msa0643470 | Msa0688770 | 0.864742 | 9.769695e-65 | -8.615850e-47 |
| Msa0646090 | Msa0688770 | 0.812900 | 3.359379e-51 | -8.615850e-47 |
| Msa0648880 | Msa0688770 | 0.840541 | 8.171994e-58 | -8.615850e-47 |
| Msa0649980 | Msa0688770 | 0.813944 | 1.980134e-51 | -8.615850e-47 |
| Msa0657610 | Msa0688770 | 0.826302 | 2.922445e-54 | -8.615850e-47 |
| Msa0657970 | Msa0688770 | 0.827733 | 1.328859e-54 | -8.615850e-47 |
| Msa0658570 | Msa0688770 | 0.815894 | 7.315984e-52 | -8.615850e-47 |
| Msa0669320 | Msa0688770 | 0.802632 | 5.117344e-49 | -8.615850e-47 |
| Msa0669440 | Msa0688770 | 0.831339 | 1.765895e-55 | -8.615850e-47 |
| Msa0682620 | Msa0688770 | 0.994568 | 2.510759e-208 | -8.615850e-47 |
| Msa0682630 | Msa0688770 | 0.822276 | 2.582599e-53 | -8.615850e-47 |
| Msa0683510 | Msa0688770 | 0.806594 | 7.627000e-50 | -8.615850e-47 |
| Msa0688770 | Msa0690520 | 0.807224 | 5.611231e-50 | -8.615850e-47 |
| Msa0688770 | Msa0691380 | 0.838141 | 3.430710e-57 | -8.615850e-47 |
| Msa0688770 | Msa0692230 | 0.809401 | 1.926772e-50 | -8.615850e-47 |
| Msa0688770 | Msa0705870 | 0.826435 | 2.717511e-54 | -8.615850e-47 |
| Msa0688770 | Msa0716760 | 0.824361 | 8.417274e-54 | -8.615850e-47 |
| Msa0688770 | Msa0722780 | 0.818534 | 1.864121e-52 | -8.615850e-47 |
| Msa0688770 | Msa0722850 | 0.824930 | 6.181707e-54 | -8.615850e-47 |
| Msa0688770 | Msa0723000 | 0.813069 | 3.084962e-51 | -8.615850e-47 |
| Msa0688770 | Msa0723050 | 0.805722 | 1.163999e-49 | -8.615850e-47 |
| Msa0688770 | Msa0723990 | 0.804386 | 2.214864e-49 | -8.615850e-47 |
| Msa0688770 | Msa0756630 | -0.805098 | 1.572859e-49 | -8.615850e-47 |
| Msa0688770 | Msa0764570 | 0.814798 | 1.282438e-51 | -8.615850e-47 |
| Msa0688770 | Msa0812990 | 0.829302 | 5.553988e-55 | -8.615850e-47 |
| Msa0688770 | Msa0816150 | 0.808320 | 3.282388e-50 | -8.615850e-47 |
| Msa0688770 | Msa0824680 | 0.813633 | 2.318703e-51 | -8.615850e-47 |
| Msa0688770 | Msa0828560 | 0.805074 | 1.590912e-49 | -8.615850e-47 |
| Msa0688770 | Msa0832370 | 0.810221 | 1.283847e-50 | -8.615850e-47 |
| Msa0688770 | Msa0843220 | 0.828558 | 8.411286e-55 | -8.615850e-47 |
| Msa0688770 | Msa0853540 | 0.846662 | 1.886931e-59 | -8.615850e-47 |
| Msa0688770 | Msa0866270 | 0.800472 | 1.418296e-48 | -8.615850e-47 |
| Msa0688770 | Msa0867890 | 0.812550 | 4.006909e-51 | -8.615850e-47 |
| Msa0688770 | Msa0880140 | 0.858769 | 6.561705e-63 | -8.615850e-47 |
| Msa0688770 | Msa0895790 | 0.813400 | 2.609535e-51 | -8.615850e-47 |
| Msa0688770 | Msa0896750 | 0.801387 | 9.222323e-49 | -8.615850e-47 |
| Msa0688770 | Msa0900180 | 0.816106 | 6.561129e-52 | -8.615850e-47 |
| Msa0688770 | Msa0908050 | 0.802617 | 5.152983e-49 | -8.615850e-47 |
| Msa0688770 | Msa0909120 | 0.831605 | 1.518842e-55 | -8.615850e-47 |
| Msa0688770 | Msa0909140 | 0.831474 | 1.635896e-55 | -8.615850e-47 |
| Msa0688770 | Msa0959360 | 0.806784 | 6.952519e-50 | -8.615850e-47 |
| Msa0688770 | Msa0964840 | 0.808583 | 2.884373e-50 | -8.615850e-47 |
| Msa0688770 | Msa0967380 | 0.800401 | 1.466498e-48 | -8.615850e-47 |
| Msa0688770 | Msa0972100 | 0.805855 | 1.091434e-49 | -8.615850e-47 |
| Msa0688770 | Msa0993290 | 0.815988 | 6.970799e-52 | -8.615850e-47 |
| Msa0688770 | Msa0993600 | 0.817909 | 2.582608e-52 | -8.615850e-47 |
| Msa0688770 | Msa1009000 | 0.805602 | 1.232974e-49 | -8.615850e-47 |
| Msa0688770 | Msa1014540 | 0.800428 | 1.447652e-48 | -8.615850e-47 |
| Msa0688770 | Msa1030970 | 0.812110 | 5.000175e-51 | -8.615850e-47 |
| Msa0688770 | Msa1057440 | 0.805008 | 1.642514e-49 | -8.615850e-47 |
| Msa0688770 | Msa1069310 | 0.802949 | 4.399852e-49 | -8.615850e-47 |
| Msa0688770 | Msa1075220 | -0.822463 | 2.337551e-53 | -8.615850e-47 |
| Msa0688770 | Msa1077180 | 0.806945 | 6.429245e-50 | -8.615850e-47 |
| Msa0688770 | Msa1078580 | -0.804577 | 2.020294e-49 | -8.615850e-47 |
| Msa0688770 | Msa1078710 | 0.810812 | 9.567779e-51 | -8.615850e-47 |
| Msa0688770 | Msa1078750 | -0.808423 | 3.119754e-50 | -8.615850e-47 |
| Msa0688770 | Msa1079590 | 0.814430 | 1.546980e-51 | -8.615850e-47 |
| Msa0688770 | Msa1082500 | 0.820973 | 5.168679e-53 | -8.615850e-47 |
| Msa0688770 | Msa1085200 | 0.831970 | 1.234055e-55 | -8.615850e-47 |
| Msa0688770 | Msa1085300 | 0.817536 | 3.133575e-52 | -8.615850e-47 |
| Msa0688770 | Msa1098560 | 0.818303 | 2.103161e-52 | -8.615850e-47 |
| Msa0688770 | Msa1111110 | 0.818117 | 2.317336e-52 | -8.615850e-47 |
| Msa0688770 | Msa1116130 | -0.817047 | 4.037743e-52 | -8.615850e-47 |
| Msa0688770 | Msa1124410 | 0.810748 | 9.879374e-51 | -8.615850e-47 |
| Msa0688770 | Msa1125000 | 0.817377 | 3.403131e-52 | -8.615850e-47 |
| Msa0688770 | Msa1133710 | 0.818102 | 2.335655e-52 | -8.615850e-47 |
| Msa0688770 | Msa1151910 | 0.814334 | 1.624272e-51 | -8.615850e-47 |
| Msa0688770 | Msa1162550 | -0.823752 | 1.169578e-53 | -8.615850e-47 |
| Msa0688770 | Msa1168160 | 0.834953 | 2.224272e-56 | -8.615850e-47 |
| Msa0688770 | Msa1169710 | 0.800832 | 1.197769e-48 | -8.615850e-47 |
| Msa0688770 | Msa1176160 | 0.801808 | 7.561854e-49 | -8.615850e-47 |
| Msa0688770 | Msa1186060 | 0.821931 | 3.104903e-53 | -8.615850e-47 |
| Msa0688770 | Msa1222970 | 0.851105 | 1.101995e-60 | -8.615850e-47 |
| Msa0688770 | Msa1222990 | 0.815744 | 7.903837e-52 | -8.615850e-47 |
| Msa0688770 | Msa1228210 | 0.860860 | 1.538846e-63 | -8.615850e-47 |
| Msa0688770 | Msa1236100 | 0.811373 | 7.232312e-51 | -8.615850e-47 |
| Msa0688770 | Msa1238930 | 0.824131 | 9.530208e-54 | -8.615850e-47 |
| Msa0688770 | Msa1242220 | 0.850409 | 1.730028e-60 | -8.615850e-47 |
| Msa0688770 | Msa1242230 | 0.852025 | 6.050443e-61 | -8.615850e-47 |
| Msa0688770 | Msa1242240 | 0.841944 | 3.494903e-58 | -8.615850e-47 |
| Msa0688770 | Msa1244250 | 0.809829 | 1.559488e-50 | -8.615850e-47 |
| Msa0688770 | Msa1264020 | 0.815488 | 9.010394e-52 | -8.615850e-47 |
| Msa0688770 | Msa1267220 | 0.800799 | 1.216749e-48 | -8.615850e-47 |
| Msa0688770 | Msa1271280 | 0.842540 | 2.430070e-58 | -8.615850e-47 |
| Msa0688770 | Msa1271290 | 0.829749 | 4.325416e-55 | -8.615850e-47 |
| Msa0688770 | Msa1271300 | 0.855830 | 4.849304e-62 | -8.615850e-47 |
| Msa0688770 | Msa1278840 | 0.813526 | 2.447521e-51 | -8.615850e-47 |
| Msa0688770 | Msa1283840 | 0.826781 | 2.247150e-54 | -8.615850e-47 |
| Msa0688770 | Msa1283860 | 0.862879 | 3.706058e-64 | -8.615850e-47 |
| Msa0688770 | Msa1284260 | 0.834351 | 3.151666e-56 | -8.615850e-47 |
| Msa0688770 | Msa1293770 | 0.810898 | 9.165833e-51 | -8.615850e-47 |
| Msa0688770 | Msa1305340 | 0.803692 | 3.087913e-49 | -8.615850e-47 |
| Msa0688770 | Msa1308380 | 0.869680 | 2.582931e-66 | -8.615850e-47 |
| Msa0688770 | Msa1313150 | 0.806439 | 8.222668e-50 | -8.615850e-47 |
| Msa0688770 | Msa1318240 | 0.820098 | 8.208433e-53 | -8.615850e-47 |
| Msa0688770 | Msa1320740 | 0.804178 | 2.447062e-49 | -8.615850e-47 |
| Msa0688770 | Msa1322860 | 0.848025 | 7.970647e-60 | -8.615850e-47 |
| Msa0688770 | Msa1322890 | 0.840213 | 9.956990e-58 | -8.615850e-47 |
| Msa0688770 | Msa1324500 | 0.809708 | 1.655736e-50 | -8.615850e-47 |
| Msa0688770 | Msa1327050 | 0.840369 | 9.064360e-58 | -8.615850e-47 |
| Msa0688770 | Msa1335860 | 0.800533 | 1.378638e-48 | -8.615850e-47 |
| Msa0688770 | Msa1367080 | 0.838172 | 3.367733e-57 | -8.615850e-47 |
| Msa0688770 | Msa1374040 | 0.814347 | 1.613890e-51 | -8.615850e-47 |
| Msa0688770 | Msa1374550 | 0.829527 | 4.896293e-55 | -8.615850e-47 |
| Msa0688770 | Msa1376890 | 0.810233 | 1.276487e-50 | -8.615850e-47 |
| Msa0688770 | Msa1378760 | 0.818029 | 2.425280e-52 | -8.615850e-47 |
| Msa0688770 | Msa1382540 | 0.809514 | 1.822073e-50 | -8.615850e-47 |
| Msa0688770 | Msa1384350 | 0.818243 | 2.169405e-52 | -8.615850e-47 |
| Msa0688770 | Msa1399550 | 0.807487 | 4.935261e-50 | -8.615850e-47 |
| Msa0688770 | Msa1402730 | 0.806694 | 7.262484e-50 | -8.615850e-47 |
| Msa0688770 | Msa1411070 | 0.844097 | 9.333130e-59 | -8.615850e-47 |
| Msa0688770 | Msa1427760 | 0.813607 | 2.349559e-51 | -8.615850e-47 |
| Msa0688770 | Msa1429150 | 0.827102 | 1.882604e-54 | -8.615850e-47 |
| Msa0688770 | Msa1438250 | 0.806025 | 1.005119e-49 | -8.615850e-47 |
| Msa0688770 | Msa1445610 | -0.822068 | 2.885943e-53 | -8.615850e-47 |
| Msa0688770 | Msa1454120 | 0.804707 | 1.898122e-49 | -8.615850e-47 |
| Msa0688770 | Msa1457910 | 0.800026 | 1.748229e-48 | -8.615850e-47 |
| Msa0688770 | Msa1459180 | 0.805524 | 1.280432e-49 | -8.615850e-47 |
| Msa0688770 | Msa1460240 | 0.807111 | 5.928363e-50 | -8.615850e-47 |
| Msa0688770 | Msa1460890 | 0.807581 | 4.712519e-50 | -8.615850e-47 |
| Msa0688770 | Msa1464940 | 0.808103 | 3.650935e-50 | -8.615850e-47 |
| Msa0133130 | Msa0688770 | 0.811623 | 6.380661e-51 | -8.615850e-47 |
| Msa0140780 | Msa0688770 | 0.814029 | 1.896399e-51 | -8.615850e-47 |
| Msa0146260 | Msa0688770 | 0.811450 | 6.959624e-51 | -8.615850e-47 |
| Msa0157290 | Msa0688770 | 0.863843 | 1.863049e-64 | -8.615850e-47 |
| Msa0169860 | Msa0688770 | 0.844674 | 6.531946e-59 | -8.615850e-47 |
| Msa0169870 | Msa0688770 | 0.807156 | 5.801180e-50 | -8.615850e-47 |
| Msa0191250 | Msa0688770 | 0.804211 | 2.408646e-49 | -8.615850e-47 |
| Msa0195000 | Msa0688770 | 0.802532 | 5.364489e-49 | -8.615850e-47 |
| Msa0197660 | Msa0688770 | 0.810467 | 1.136325e-50 | -8.615850e-47 |
| Msa0200260 | Msa0688770 | 0.827443 | 1.560130e-54 | -8.615850e-47 |
| Msa0202950 | Msa0688770 | 0.812853 | 3.440122e-51 | -8.615850e-47 |
| Msa0203030 | Msa0688770 | 0.810427 | 1.159173e-50 | -8.615850e-47 |
| Msa0215320 | Msa0688770 | -0.804639 | 1.961246e-49 | -8.615850e-47 |
| Msa0220740 | Msa0688770 | 0.812719 | 3.679400e-51 | -8.615850e-47 |
| Msa0221290 | Msa0688770 | 0.845048 | 5.177945e-59 | -8.615850e-47 |
| Msa0231650 | Msa0688770 | 0.800244 | 1.578582e-48 | -8.615850e-47 |
| Msa0234600 | Msa0688770 | 0.833327 | 5.683464e-56 | -8.615850e-47 |
| Msa0371540 | Msa0688770 | 0.804448 | 2.150200e-49 | -8.615850e-47 |
| Msa0373930 | Msa0688770 | 0.820723 | 5.900560e-53 | -8.615850e-47 |
| Msa0378500 | Msa0688770 | 0.802532 | 5.365023e-49 | -8.615850e-47 |
| Msa0380740 | Msa0688770 | 0.819535 | 1.103598e-52 | -8.615850e-47 |
| Msa0388960 | Msa0688770 | 0.807746 | 4.347039e-50 | -8.615850e-47 |
| Msa0389340 | Msa0688770 | 0.803020 | 4.254315e-49 | -8.615850e-47 |
| Msa0392420 | Msa0688770 | 0.807516 | 4.865960e-50 | -8.615850e-47 |
| Msa0392460 | Msa0688770 | 0.806202 | 9.221664e-50 | -8.615850e-47 |
| Msa0395790 | Msa0688770 | 0.816739 | 4.734937e-52 | -8.615850e-47 |
| Msa0398710 | Msa0688770 | 0.836641 | 8.306923e-57 | -8.615850e-47 |
| Msa0410650 | Msa0688770 | 0.830411 | 2.981141e-55 | -8.615850e-47 |
| Msa0417270 | Msa0688770 | 0.801248 | 9.846309e-49 | -8.615850e-47 |
| Msa0419820 | Msa0688770 | 0.800950 | 1.133130e-48 | -8.615850e-47 |
| Msa0422850 | Msa0688770 | 0.802316 | 5.945423e-49 | -8.615850e-47 |
| Msa0422930 | Msa0688770 | 0.802772 | 4.787802e-49 | -8.615850e-47 |
| Msa0440750 | Msa0688770 | 0.803123 | 4.050241e-49 | -8.615850e-47 |
| Msa0453330 | Msa0688770 | 0.818499 | 1.898226e-52 | -8.615850e-47 |
| Msa0461720 | Msa0688770 | 0.821655 | 3.596576e-53 | -8.615850e-47 |
| Msa0465910 | Msa0688770 | 0.816991 | 4.156106e-52 | -8.615850e-47 |
| Msa0465950 | Msa0688770 | 0.838327 | 3.070912e-57 | -8.615850e-47 |
| Msa0466060 | Msa0688770 | 0.801899 | 7.240830e-49 | -8.615850e-47 |
| Msa0466390 | Msa0688770 | 0.813470 | 2.518806e-51 | -8.615850e-47 |
| Msa0480980 | Msa0688770 | 0.829645 | 4.584524e-55 | -8.615850e-47 |
| Msa0238890 | Msa0688770 | 0.827610 | 1.422253e-54 | -8.615850e-47 |
| Msa0239800 | Msa0688770 | 0.810237 | 1.273586e-50 | -8.615850e-47 |
| Msa0243100 | Msa0688770 | 0.842784 | 2.092953e-58 | -8.615850e-47 |
| Msa0261340 | Msa0688770 | 0.812125 | 4.963022e-51 | -8.615850e-47 |
| Msa0284420 | Msa0688770 | 0.820281 | 7.450287e-53 | -8.615850e-47 |
| Msa0287650 | Msa0688770 | 0.834232 | 3.375460e-56 | -8.615850e-47 |
| Msa0297740 | Msa0688770 | 0.817186 | 3.758231e-52 | -8.615850e-47 |
| Msa0300610 | Msa0688770 | 0.812532 | 4.044175e-51 | -8.615850e-47 |
| Msa0308830 | Msa0688770 | 0.818718 | 1.693576e-52 | -8.615850e-47 |
| Msa0313410 | Msa0688770 | 0.814776 | 1.296533e-51 | -8.615850e-47 |
| Msa0317510 | Msa0688770 | 0.817656 | 2.945631e-52 | -8.615850e-47 |
| Msa0320100 | Msa0688770 | 0.805938 | 1.048100e-49 | -8.615850e-47 |
| Msa0323610 | Msa0688770 | 0.811712 | 6.105113e-51 | -8.615850e-47 |
| Msa0337860 | Msa0688770 | 0.814579 | 1.433510e-51 | -8.615850e-47 |
| Msa0338110 | Msa0688770 | 0.815067 | 1.117551e-51 | -8.615850e-47 |
| Msa0340450 | Msa0688770 | 0.808546 | 2.936845e-50 | -8.615850e-47 |
| Msa0345330 | Msa0688770 | 0.807636 | 4.588188e-50 | -8.615850e-47 |
| Msa0345410 | Msa0688770 | 0.804948 | 1.690319e-49 | -8.615850e-47 |
| Msa0345970 | Msa0688770 | 0.827730 | 1.331337e-54 | -8.615850e-47 |
| Msa0357340 | Msa0688770 | 0.811640 | 6.326907e-51 | -8.615850e-47 |
| Msa0362780 | Msa0688770 | 0.835405 | 1.710284e-56 | -8.615850e-47 |
| Msa0487570 | Msa0688770 | 0.807197 | 5.684504e-50 | -8.615850e-47 |
| Msa0487630 | Msa0688770 | 0.807168 | 5.767261e-50 | -8.615850e-47 |
| Msa0495320 | Msa0688770 | 0.823023 | 1.730998e-53 | -8.615850e-47 |
| Msa0495330 | Msa0688770 | 0.800231 | 1.588039e-48 | -8.615850e-47 |
| Msa0500360 | Msa0688770 | 0.845296 | 4.436658e-59 | -8.615850e-47 |
| Msa0507680 | Msa0688770 | 0.827407 | 1.591163e-54 | -8.615850e-47 |
| Msa0509610 | Msa0688770 | 0.819403 | 1.182698e-52 | -8.615850e-47 |
| Msa0514030 | Msa0688770 | 0.808160 | 3.550272e-50 | -8.615850e-47 |
| Msa0517330 | Msa0688770 | 0.802193 | 6.301553e-49 | -8.615850e-47 |
| Msa0517340 | Msa0688770 | 0.815544 | 8.755558e-52 | -8.615850e-47 |
| Msa0523460 | Msa0688770 | 0.850102 | 2.110089e-60 | -8.615850e-47 |
| Msa0533070 | Msa0688770 | 0.817007 | 4.122423e-52 | -8.615850e-47 |
| Msa0535040 | Msa0688770 | 0.826076 | 3.308705e-54 | -8.615850e-47 |
| Msa0546790 | Msa0688770 | 0.803568 | 3.275497e-49 | -8.615850e-47 |
| Msa0547140 | Msa0688770 | 0.808050 | 3.746930e-50 | -8.615850e-47 |
| Msa0547490 | Msa0688770 | 0.912572 | 1.671031e-83 | -8.615850e-47 |
| Msa0555020 | Msa0688770 | 0.819919 | 9.018688e-53 | -8.615850e-47 |
| Msa0567020 | Msa0688770 | 0.801505 | 8.722231e-49 | -8.615850e-47 |
| Msa0571140 | Msa0688770 | 0.818931 | 1.515013e-52 | -8.615850e-47 |
| Msa0574890 | Msa0688770 | 0.810886 | 9.224408e-51 | -8.615850e-47 |
| Msa0581760 | Msa0688770 | 0.825309 | 5.029732e-54 | -8.615850e-47 |
| Msa0585230 | Msa0688770 | 0.805652 | 1.203636e-49 | -8.615850e-47 |
| Msa0585300 | Msa0688770 | 0.801007 | 1.103043e-48 | -8.615850e-47 |
| Msa0597330 | Msa0688770 | 0.818788 | 1.633050e-52 | -8.615850e-47 |
| Msa0601850 | Msa0688770 | 0.805987 | 1.023424e-49 | -8.615850e-47 |
| Msa0602240 | Msa0688770 | 0.924901 | 3.785521e-90 | -8.615850e-47 |
| Msa0602250 | Msa0688770 | 0.929083 | 1.155400e-92 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0688770 | MtrunA17_Chr4g0029791 | 97.872 | 94 | 2 | 0 | 1 | 94 | 1 | 94 | 6.33e-65 | 190 |
| Msa0688770 | MtrunA17_Chr2g0326261 | 45.361 | 97 | 27 | 4 | 1 | 94 | 1 | 74 | 1.80e-11 | 54.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0688770 | AT5G60400.3 | 40.449 | 89 | 51 | 1 | 6 | 94 | 5 | 91 | 9.26e-12 | 56.2 |
Find 24 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGTTCCTCTCTGTCTTTC+TGG | 0.075036 | 4_4:-54971836 | Msa0688770:CDS |
| AAAATCAAATATGCATATTT+TGG | 0.124229 | 4_4:-54971234 | Msa0688770:three_prime_UTR |
| GTTTAACATGGACTGCATTT+TGG | 0.222924 | 4_4:+54971874 | None:intergenic |
| ACTTACTAGAATGTTAATTT+AGG | 0.250075 | 4_4:+54971338 | None:intergenic |
| AAAAGCTGCTTAGTTAGATT+TGG | 0.304540 | 4_4:-54971471 | Msa0688770:exon |
| CGAAGTTTCACCCTATTCAT+TGG | 0.395651 | 4_4:+54971291 | None:intergenic |
| TGATGATGATCTTGAAGATC+TGG | 0.442771 | 4_4:-54971543 | Msa0688770:CDS |
| TTCGTACGGACATATTTGTA+TGG | 0.453259 | 4_4:-54971272 | Msa0688770:three_prime_UTR |
| AGTGCATGCAAATCAAGAAA+AGG | 0.472454 | 4_4:-54971609 | Msa0688770:CDS |
| ACTGATGTGACCAATGAATA+GGG | 0.474910 | 4_4:-54971301 | Msa0688770:three_prime_UTR |
| AACTGATGTGACCAATGAAT+AGG | 0.478716 | 4_4:-54971302 | Msa0688770:three_prime_UTR |
| TTAAACCTTCGTGCTACTCA+TGG | 0.498021 | 4_4:-54971857 | Msa0688770:CDS |
| ACCGAAGAAGAAAAGATATG+AGG | 0.524381 | 4_4:-54971643 | Msa0688770:CDS |
| GTGCATGCAAATCAAGAAAA+GGG | 0.524986 | 4_4:-54971608 | Msa0688770:CDS |
| CTGTCTCTTACTTATCTCAC+AGG | 0.529035 | 4_4:-54971503 | Msa0688770:CDS |
| TACTCTTTGGAAAGAGCAAG+AGG | 0.575505 | 4_4:+54971803 | None:intergenic |
| AACATTCTAGTAAGTTCAGA+CGG | 0.600784 | 4_4:-54971330 | Msa0688770:three_prime_UTR |
| TTTGGAAAGAGCAAGAGGGT+TGG | 0.601098 | 4_4:+54971808 | None:intergenic |
| AAAAGGATGGGAAATAAAGG+AGG | 0.624688 | 4_4:+54971925 | None:intergenic |
| GAATAGGGTGAAACTTCGTA+CGG | 0.636390 | 4_4:-54971286 | Msa0688770:three_prime_UTR |
| ACTCTTTGGAAAGAGCAAGA+GGG | 0.667434 | 4_4:+54971804 | None:intergenic |
| AGTAGCACGAAGGTTTAACA+TGG | 0.672060 | 4_4:+54971862 | None:intergenic |
| GTGATTCCAGAAAGACAGAG+AGG | 0.712435 | 4_4:+54971830 | None:intergenic |
| GAACTCCATGAGTAGCACGA+AGG | 0.732005 | 4_4:+54971852 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATTAATTTACTCTT+TGG | + | chr4_4:54971444-54971463 | None:intergenic | 10.0% |
| !! | AAATAAATTAATTTACTCTT+TGG | + | chr4_4:54971444-54971463 | None:intergenic | 10.0% |
| !!! | AAAATCAAATATGCATATTT+TGG | - | chr4_4:54971997-54972016 | Msa0688770:five_prime_UTR | 15.0% |
| !!! | AAAATCAAATATGCATATTT+TGG | - | chr4_4:54971997-54972016 | Msa0688770:five_prime_UTR | 15.0% |
| !! | TGATATATGTTTGAATTTGA+TGG | - | chr4_4:54971546-54971565 | Msa0688770:CDS | 20.0% |
| !! | ACTTACTAGAATGTTAATTT+AGG | + | chr4_4:54971896-54971915 | None:intergenic | 20.0% |
| !!! | ATGCATATTTGATTTTGATT+TGG | + | chr4_4:54971993-54972012 | None:intergenic | 20.0% |
| !! | TGATATATGTTTGAATTTGA+TGG | - | chr4_4:54971546-54971565 | Msa0688770:CDS | 20.0% |
| !! | ACTTACTAGAATGTTAATTT+AGG | + | chr4_4:54971896-54971915 | None:intergenic | 20.0% |
| !!! | ATGCATATTTGATTTTGATT+TGG | + | chr4_4:54971993-54972012 | None:intergenic | 20.0% |
| !! | TTTTCTAGGTAAAGGAAAAA+AGG | + | chr4_4:54971326-54971345 | None:intergenic | 25.0% |
| !!! | GTTTTGTTTTTTCTAGGTAA+AGG | + | chr4_4:54971334-54971353 | None:intergenic | 25.0% |
| !!! | TGGTTTGTTTTGTTTTTTCT+AGG | + | chr4_4:54971340-54971359 | None:intergenic | 25.0% |
| !! | TCAAAGAAACAATGATTTTG+TGG | - | chr4_4:54971655-54971674 | Msa0688770:CDS | 25.0% |
| !! | TCTAAATCACTTTCATTTTC+TGG | - | chr4_4:54971797-54971816 | Msa0688770:intron | 25.0% |
| !! | TTTTCTAGGTAAAGGAAAAA+AGG | + | chr4_4:54971326-54971345 | None:intergenic | 25.0% |
| !!! | GTTTTGTTTTTTCTAGGTAA+AGG | + | chr4_4:54971334-54971353 | None:intergenic | 25.0% |
| !!! | TGGTTTGTTTTGTTTTTTCT+AGG | + | chr4_4:54971340-54971359 | None:intergenic | 25.0% |
| !! | TCAAAGAAACAATGATTTTG+TGG | - | chr4_4:54971655-54971674 | Msa0688770:CDS | 25.0% |
| !! | TCTAAATCACTTTCATTTTC+TGG | - | chr4_4:54971797-54971816 | Msa0688770:intron | 25.0% |
| GAAAAAAGGATGGGAAATAA+AGG | + | chr4_4:54971312-54971331 | None:intergenic | 30.0% | |
| TAGGTAAAGGAAAAAAGGAT+GGG | + | chr4_4:54971321-54971340 | None:intergenic | 30.0% | |
| ! | TCCTCATATCTTTTCTTCTT+CGG | + | chr4_4:54971592-54971611 | None:intergenic | 30.0% |
| ! | AATGATTTTGTGGAGATGAA+AGG | - | chr4_4:54971665-54971684 | Msa0688770:intron | 30.0% |
| AAAAGCTGCTTAGTTAGATT+TGG | - | chr4_4:54971760-54971779 | Msa0688770:intron | 30.0% | |
| AACATTCTAGTAAGTTCAGA+CGG | - | chr4_4:54971901-54971920 | Msa0688770:five_prime_UTR | 30.0% | |
| GAAAAAAGGATGGGAAATAA+AGG | + | chr4_4:54971312-54971331 | None:intergenic | 30.0% | |
| TAGGTAAAGGAAAAAAGGAT+GGG | + | chr4_4:54971321-54971340 | None:intergenic | 30.0% | |
| ! | TCCTCATATCTTTTCTTCTT+CGG | + | chr4_4:54971592-54971611 | None:intergenic | 30.0% |
| ! | AATGATTTTGTGGAGATGAA+AGG | - | chr4_4:54971665-54971684 | Msa0688770:intron | 30.0% |
| AAAAGCTGCTTAGTTAGATT+TGG | - | chr4_4:54971760-54971779 | Msa0688770:intron | 30.0% | |
| AACATTCTAGTAAGTTCAGA+CGG | - | chr4_4:54971901-54971920 | Msa0688770:five_prime_UTR | 30.0% | |
| AAAAGGATGGGAAATAAAGG+AGG | + | chr4_4:54971309-54971328 | None:intergenic | 35.0% | |
| CTAGGTAAAGGAAAAAAGGA+TGG | + | chr4_4:54971322-54971341 | None:intergenic | 35.0% | |
| !! | GTTTAACATGGACTGCATTT+TGG | + | chr4_4:54971360-54971379 | None:intergenic | 35.0% |
| GTGAGATCATAGATCAAAAG+AGG | + | chr4_4:54971486-54971505 | None:intergenic | 35.0% | |
| !! | ATGTTTGAATTTGATGGTGC+AGG | - | chr4_4:54971552-54971571 | Msa0688770:CDS | 35.0% |
| ACCGAAGAAGAAAAGATATG+AGG | - | chr4_4:54971588-54971607 | Msa0688770:CDS | 35.0% | |
| AGTGCATGCAAATCAAGAAA+AGG | - | chr4_4:54971622-54971641 | Msa0688770:CDS | 35.0% | |
| GTGCATGCAAATCAAGAAAA+GGG | - | chr4_4:54971623-54971642 | Msa0688770:CDS | 35.0% | |
| ! | TGATGATGATCTTGAAGATC+TGG | - | chr4_4:54971688-54971707 | Msa0688770:intron | 35.0% |
| AACTGATGTGACCAATGAAT+AGG | - | chr4_4:54971929-54971948 | Msa0688770:five_prime_UTR | 35.0% | |
| ACTGATGTGACCAATGAATA+GGG | - | chr4_4:54971930-54971949 | Msa0688770:five_prime_UTR | 35.0% | |
| TTCGTACGGACATATTTGTA+TGG | - | chr4_4:54971959-54971978 | Msa0688770:five_prime_UTR | 35.0% | |
| AAAAGGATGGGAAATAAAGG+AGG | + | chr4_4:54971309-54971328 | None:intergenic | 35.0% | |
| CTAGGTAAAGGAAAAAAGGA+TGG | + | chr4_4:54971322-54971341 | None:intergenic | 35.0% | |
| !! | GTTTAACATGGACTGCATTT+TGG | + | chr4_4:54971360-54971379 | None:intergenic | 35.0% |
| GTGAGATCATAGATCAAAAG+AGG | + | chr4_4:54971486-54971505 | None:intergenic | 35.0% | |
| !! | ATGTTTGAATTTGATGGTGC+AGG | - | chr4_4:54971552-54971571 | Msa0688770:CDS | 35.0% |
| ACCGAAGAAGAAAAGATATG+AGG | - | chr4_4:54971588-54971607 | Msa0688770:CDS | 35.0% | |
| AGTGCATGCAAATCAAGAAA+AGG | - | chr4_4:54971622-54971641 | Msa0688770:CDS | 35.0% | |
| GTGCATGCAAATCAAGAAAA+GGG | - | chr4_4:54971623-54971642 | Msa0688770:CDS | 35.0% | |
| ! | TGATGATGATCTTGAAGATC+TGG | - | chr4_4:54971688-54971707 | Msa0688770:intron | 35.0% |
| AACTGATGTGACCAATGAAT+AGG | - | chr4_4:54971929-54971948 | Msa0688770:five_prime_UTR | 35.0% | |
| ACTGATGTGACCAATGAATA+GGG | - | chr4_4:54971930-54971949 | Msa0688770:five_prime_UTR | 35.0% | |
| TTCGTACGGACATATTTGTA+TGG | - | chr4_4:54971959-54971978 | Msa0688770:five_prime_UTR | 35.0% | |
| AGTAGCACGAAGGTTTAACA+TGG | + | chr4_4:54971372-54971391 | None:intergenic | 40.0% | |
| ! | TTAAACCTTCGTGCTACTCA+TGG | - | chr4_4:54971374-54971393 | Msa0688770:three_prime_UTR | 40.0% |
| ! | ACTCTTTGGAAAGAGCAAGA+GGG | + | chr4_4:54971430-54971449 | None:intergenic | 40.0% |
| ! | TACTCTTTGGAAAGAGCAAG+AGG | + | chr4_4:54971431-54971450 | None:intergenic | 40.0% |
| !! | TTGAATTTGATGGTGCAGGA+TGG | - | chr4_4:54971556-54971575 | Msa0688770:CDS | 40.0% |
| CTGTCTCTTACTTATCTCAC+AGG | - | chr4_4:54971728-54971747 | Msa0688770:intron | 40.0% | |
| CGAAGTTTCACCCTATTCAT+TGG | + | chr4_4:54971943-54971962 | None:intergenic | 40.0% | |
| GAATAGGGTGAAACTTCGTA+CGG | - | chr4_4:54971945-54971964 | Msa0688770:five_prime_UTR | 40.0% | |
| AGTAGCACGAAGGTTTAACA+TGG | + | chr4_4:54971372-54971391 | None:intergenic | 40.0% | |
| ! | TTAAACCTTCGTGCTACTCA+TGG | - | chr4_4:54971374-54971393 | Msa0688770:three_prime_UTR | 40.0% |
| ! | ACTCTTTGGAAAGAGCAAGA+GGG | + | chr4_4:54971430-54971449 | None:intergenic | 40.0% |
| ! | TACTCTTTGGAAAGAGCAAG+AGG | + | chr4_4:54971431-54971450 | None:intergenic | 40.0% |
| !! | TTGAATTTGATGGTGCAGGA+TGG | - | chr4_4:54971556-54971575 | Msa0688770:CDS | 40.0% |
| CTGTCTCTTACTTATCTCAC+AGG | - | chr4_4:54971728-54971747 | Msa0688770:intron | 40.0% | |
| CGAAGTTTCACCCTATTCAT+TGG | + | chr4_4:54971943-54971962 | None:intergenic | 40.0% | |
| GAATAGGGTGAAACTTCGTA+CGG | - | chr4_4:54971945-54971964 | Msa0688770:five_prime_UTR | 40.0% | |
| GTGATTCCAGAAAGACAGAG+AGG | + | chr4_4:54971404-54971423 | None:intergenic | 45.0% | |
| TTTGGAAAGAGCAAGAGGGT+TGG | + | chr4_4:54971426-54971445 | None:intergenic | 45.0% | |
| GTGATTCCAGAAAGACAGAG+AGG | + | chr4_4:54971404-54971423 | None:intergenic | 45.0% | |
| TTTGGAAAGAGCAAGAGGGT+TGG | + | chr4_4:54971426-54971445 | None:intergenic | 45.0% | |
| GAACTCCATGAGTAGCACGA+AGG | + | chr4_4:54971382-54971401 | None:intergenic | 50.0% | |
| GGAGTTCCTCTCTGTCTTTC+TGG | - | chr4_4:54971395-54971414 | Msa0688770:three_prime_UTR | 50.0% | |
| GAACTCCATGAGTAGCACGA+AGG | + | chr4_4:54971382-54971401 | None:intergenic | 50.0% | |
| GGAGTTCCTCTCTGTCTTTC+TGG | - | chr4_4:54971395-54971414 | Msa0688770:three_prime_UTR | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 54971232 | 54972021 | 54971232 | ID=Msa0688770;Name=Msa0688770 |
| chr4_4 | mRNA | 54971232 | 54972021 | 54971232 | ID=Msa0688770-mRNA-1;Parent=Msa0688770;Name=Msa0688770-mRNA-1;_AED=0.08;_eAED=0.08;_QI=130|1|1|1|1|1|2|249|94 |
| chr4_4 | exon | 54971232 | 54971679 | 54971232 | ID=Msa0688770-mRNA-1:exon:14514;Parent=Msa0688770-mRNA-1 |
| chr4_4 | exon | 54971806 | 54972021 | 54971806 | ID=Msa0688770-mRNA-1:exon:14513;Parent=Msa0688770-mRNA-1 |
| chr4_4 | five_prime_UTR | 54971892 | 54972021 | 54971892 | ID=Msa0688770-mRNA-1:five_prime_utr;Parent=Msa0688770-mRNA-1 |
| chr4_4 | CDS | 54971806 | 54971891 | 54971806 | ID=Msa0688770-mRNA-1:cds;Parent=Msa0688770-mRNA-1 |
| chr4_4 | CDS | 54971481 | 54971679 | 54971481 | ID=Msa0688770-mRNA-1:cds;Parent=Msa0688770-mRNA-1 |
| chr4_4 | three_prime_UTR | 54971232 | 54971480 | 54971232 | ID=Msa0688770-mRNA-1:three_prime_utr;Parent=Msa0688770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
