Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460240 | XP_039688675.1 | 95.062 | 162 | 8 | 0 | 1 | 162 | 505 | 666 | 3.45e-98 | 307 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460240 | sp|Q9SJJ3|BLH8_ARATH | 43.452 | 168 | 47 | 6 | 1 | 162 | 459 | 584 | 3.59e-27 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460240 | A0A396I7I3 | 95.062 | 162 | 8 | 0 | 1 | 162 | 505 | 666 | 1.65e-98 | 307 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa1460240 | 0.825494 | 4.546471e-54 | -8.615850e-47 |
| Msa0004920 | Msa1460240 | 0.812919 | 3.327373e-51 | -8.615850e-47 |
| Msa0007080 | Msa1460240 | 0.812243 | 4.675912e-51 | -8.615850e-47 |
| Msa0016120 | Msa1460240 | 0.801103 | 1.054210e-48 | -8.615850e-47 |
| Msa0017510 | Msa1460240 | 0.864244 | 1.397473e-64 | -8.615850e-47 |
| Msa0020930 | Msa1460240 | 0.816895 | 4.368732e-52 | -8.615850e-47 |
| Msa0028640 | Msa1460240 | 0.806297 | 8.808018e-50 | -8.615850e-47 |
| Msa0034270 | Msa1460240 | 0.805181 | 1.510781e-49 | -8.615850e-47 |
| Msa0040450 | Msa1460240 | 0.822989 | 1.762850e-53 | -8.615850e-47 |
| Msa0047050 | Msa1460240 | 0.818900 | 1.540031e-52 | -8.615850e-47 |
| Msa0051770 | Msa1460240 | 0.801380 | 9.255372e-49 | -8.615850e-47 |
| Msa0068680 | Msa1460240 | 0.816780 | 4.635375e-52 | -8.615850e-47 |
| Msa0072370 | Msa1460240 | 0.804304 | 2.303131e-49 | -8.615850e-47 |
| Msa0073530 | Msa1460240 | 0.816241 | 6.121362e-52 | -8.615850e-47 |
| Msa0086650 | Msa1460240 | 0.827304 | 1.684413e-54 | -8.615850e-47 |
| Msa0095500 | Msa1460240 | 0.801830 | 7.480933e-49 | -8.615850e-47 |
| Msa0110970 | Msa1460240 | 0.831561 | 1.556552e-55 | -8.615850e-47 |
| Msa0112750 | Msa1460240 | 0.812127 | 4.956302e-51 | -8.615850e-47 |
| Msa0114060 | Msa1460240 | 0.807605 | 4.658760e-50 | -8.615850e-47 |
| Msa0116770 | Msa1460240 | 0.801984 | 6.957669e-49 | -8.615850e-47 |
| Msa0119960 | Msa1460240 | 0.814075 | 1.853317e-51 | -8.615850e-47 |
| Msa1357530 | Msa1460240 | 0.823723 | 1.188000e-53 | -8.615850e-47 |
| Msa1367080 | Msa1460240 | 0.810541 | 1.095091e-50 | -8.615850e-47 |
| Msa1372760 | Msa1460240 | 0.808226 | 3.435985e-50 | -8.615850e-47 |
| Msa1373030 | Msa1460240 | 0.816813 | 4.557331e-52 | -8.615850e-47 |
| Msa1384350 | Msa1460240 | 0.811616 | 6.405097e-51 | -8.615850e-47 |
| Msa1398340 | Msa1460240 | 0.810566 | 1.081544e-50 | -8.615850e-47 |
| Msa1409870 | Msa1460240 | 0.815977 | 7.010496e-52 | -8.615850e-47 |
| Msa1411020 | Msa1460240 | 0.804972 | 1.670870e-49 | -8.615850e-47 |
| Msa1424290 | Msa1460240 | 0.805561 | 1.257866e-49 | -8.615850e-47 |
| Msa1434350 | Msa1460240 | 0.802710 | 4.930667e-49 | -8.615850e-47 |
| Msa1438250 | Msa1460240 | 0.823420 | 1.398333e-53 | -8.615850e-47 |
| Msa1439320 | Msa1460240 | 0.804626 | 1.974033e-49 | -8.615850e-47 |
| Msa1452120 | Msa1460240 | 0.807656 | 4.544704e-50 | -8.615850e-47 |
| Msa1460020 | Msa1460240 | 0.835249 | 1.873011e-56 | -8.615850e-47 |
| Msa1460050 | Msa1460240 | 0.816973 | 4.195085e-52 | -8.615850e-47 |
| Msa1460240 | Msa1463670 | 0.814809 | 1.275152e-51 | -8.615850e-47 |
| Msa0607050 | Msa1460240 | 0.803550 | 3.304481e-49 | -8.615850e-47 |
| Msa0608620 | Msa1460240 | 0.800689 | 1.281123e-48 | -8.615850e-47 |
| Msa0627450 | Msa1460240 | 0.807758 | 4.322367e-50 | -8.615850e-47 |
| Msa0634730 | Msa1460240 | 0.807995 | 3.849355e-50 | -8.615850e-47 |
| Msa0641360 | Msa1460240 | 0.806271 | 8.921643e-50 | -8.615850e-47 |
| Msa0648880 | Msa1460240 | 0.818924 | 1.520165e-52 | -8.615850e-47 |
| Msa0657610 | Msa1460240 | 0.804983 | 1.662261e-49 | -8.615850e-47 |
| Msa0657970 | Msa1460240 | 0.868346 | 6.992481e-66 | -8.615850e-47 |
| Msa0658570 | Msa1460240 | 0.800765 | 1.236317e-48 | -8.615850e-47 |
| Msa0663390 | Msa1460240 | 0.812020 | 5.230906e-51 | -8.615850e-47 |
| Msa0667050 | Msa1460240 | 0.810097 | 1.365590e-50 | -8.615850e-47 |
| Msa0669440 | Msa1460240 | 0.816277 | 6.007530e-52 | -8.615850e-47 |
| Msa0682330 | Msa1460240 | 0.811811 | 5.807142e-51 | -8.615850e-47 |
| Msa0682550 | Msa1460240 | 0.810876 | 9.267752e-51 | -8.615850e-47 |
| Msa0682620 | Msa1460240 | 0.810309 | 1.228791e-50 | -8.615850e-47 |
| Msa0683510 | Msa1460240 | 0.800880 | 1.170827e-48 | -8.615850e-47 |
| Msa0688770 | Msa1460240 | 0.807111 | 5.928363e-50 | -8.615850e-47 |
| Msa0691380 | Msa1460240 | 0.821399 | 4.121147e-53 | -8.615850e-47 |
| Msa0693380 | Msa1460240 | 0.829161 | 6.009922e-55 | -8.615850e-47 |
| Msa0708520 | Msa1460240 | 0.811883 | 5.601275e-51 | -8.615850e-47 |
| Msa0727710 | Msa1460240 | 0.810655 | 1.034571e-50 | -8.615850e-47 |
| Msa0740430 | Msa1460240 | 0.817593 | 3.042048e-52 | -8.615850e-47 |
| Msa0756630 | Msa1460240 | -0.802275 | 6.059918e-49 | -8.615850e-47 |
| Msa0767300 | Msa1460240 | 0.809598 | 1.747873e-50 | -8.615850e-47 |
| Msa0769920 | Msa1460240 | 0.809134 | 2.198968e-50 | -8.615850e-47 |
| Msa0777790 | Msa1460240 | 0.802786 | 4.755697e-49 | -8.615850e-47 |
| Msa0777850 | Msa1460240 | 0.810801 | 9.619972e-51 | -8.615850e-47 |
| Msa0777930 | Msa1460240 | 0.807712 | 4.421640e-50 | -8.615850e-47 |
| Msa0806090 | Msa1460240 | 0.810754 | 9.848414e-51 | -8.615850e-47 |
| Msa0824660 | Msa1460240 | 0.825802 | 3.843323e-54 | -8.615850e-47 |
| Msa0824680 | Msa1460240 | 0.824280 | 8.794364e-54 | -8.615850e-47 |
| Msa0828560 | Msa1460240 | 0.808465 | 3.056038e-50 | -8.615850e-47 |
| Msa0830530 | Msa1460240 | 0.802988 | 4.320689e-49 | -8.615850e-47 |
| Msa0125090 | Msa1460240 | 0.802417 | 5.667272e-49 | -8.615850e-47 |
| Msa0130570 | Msa1460240 | 0.811259 | 7.654580e-51 | -8.615850e-47 |
| Msa0133130 | Msa1460240 | 0.800147 | 1.652055e-48 | -8.615850e-47 |
| Msa0136070 | Msa1460240 | 0.807951 | 3.933342e-50 | -8.615850e-47 |
| Msa0140780 | Msa1460240 | 0.824253 | 8.921581e-54 | -8.615850e-47 |
| Msa0145250 | Msa1460240 | 0.809772 | 1.604269e-50 | -8.615850e-47 |
| Msa0153420 | Msa1460240 | 0.821034 | 5.002590e-53 | -8.615850e-47 |
| Msa0157290 | Msa1460240 | 0.864124 | 1.523630e-64 | -8.615850e-47 |
| Msa0159930 | Msa1460240 | 0.825326 | 4.983134e-54 | -8.615850e-47 |
| Msa0165210 | Msa1460240 | 0.811232 | 7.760531e-51 | -8.615850e-47 |
| Msa0165220 | Msa1460240 | 0.801341 | 9.424158e-49 | -8.615850e-47 |
| Msa0169860 | Msa1460240 | 0.816142 | 6.441015e-52 | -8.615850e-47 |
| Msa0173990 | Msa1460240 | 0.811720 | 6.078366e-51 | -8.615850e-47 |
| Msa0191250 | Msa1460240 | 0.804703 | 1.902291e-49 | -8.615850e-47 |
| Msa0197660 | Msa1460240 | 0.820029 | 8.508883e-53 | -8.615850e-47 |
| Msa0200260 | Msa1460240 | 0.838369 | 2.995438e-57 | -8.615850e-47 |
| Msa0202950 | Msa1460240 | 0.827618 | 1.416065e-54 | -8.615850e-47 |
| Msa0212310 | Msa1460240 | 0.806921 | 6.503390e-50 | -8.615850e-47 |
| Msa0220580 | Msa1460240 | 0.821718 | 3.478801e-53 | -8.615850e-47 |
| Msa0220740 | Msa1460240 | 0.812310 | 4.521218e-51 | -8.615850e-47 |
| Msa0221290 | Msa1460240 | 0.816507 | 5.337323e-52 | -8.615850e-47 |
| Msa0223410 | Msa1460240 | -0.803611 | 3.209482e-49 | -8.615850e-47 |
| Msa0223690 | Msa1460240 | 0.802608 | 5.176357e-49 | -8.615850e-47 |
| Msa1228210 | Msa1460240 | 0.826275 | 2.966937e-54 | -8.615850e-47 |
| Msa1238930 | Msa1460240 | 0.808327 | 3.270000e-50 | -8.615850e-47 |
| Msa1242220 | Msa1460240 | 0.848267 | 6.835105e-60 | -8.615850e-47 |
| Msa1242230 | Msa1460240 | 0.812748 | 3.625955e-51 | -8.615850e-47 |
| Msa1242240 | Msa1460240 | 0.808611 | 2.844429e-50 | -8.615850e-47 |
| Msa1264020 | Msa1460240 | 0.801768 | 7.705243e-49 | -8.615850e-47 |
| Msa1271280 | Msa1460240 | 0.829997 | 3.762560e-55 | -8.615850e-47 |
| Msa1271290 | Msa1460240 | 0.827732 | 1.329605e-54 | -8.615850e-47 |
| Msa1271300 | Msa1460240 | 0.829507 | 4.953507e-55 | -8.615850e-47 |
| Msa1278840 | Msa1460240 | 0.833750 | 4.458240e-56 | -8.615850e-47 |
| Msa1280420 | Msa1460240 | 0.804443 | 2.155074e-49 | -8.615850e-47 |
| Msa1283840 | Msa1460240 | 0.804634 | 1.965764e-49 | -8.615850e-47 |
| Msa1283860 | Msa1460240 | 0.844926 | 5.585339e-59 | -8.615850e-47 |
| Msa1284260 | Msa1460240 | 0.808106 | 3.644446e-50 | -8.615850e-47 |
| Msa1289280 | Msa1460240 | 0.828472 | 8.822108e-55 | -8.615850e-47 |
| Msa1296760 | Msa1460240 | 0.822492 | 2.301630e-53 | -8.615850e-47 |
| Msa1305340 | Msa1460240 | 0.802901 | 4.502746e-49 | -8.615850e-47 |
| Msa1308380 | Msa1460240 | 0.845324 | 4.361535e-59 | -8.615850e-47 |
| Msa1314170 | Msa1460240 | 0.808215 | 3.455303e-50 | -8.615850e-47 |
| Msa1316980 | Msa1460240 | 0.802070 | 6.680362e-49 | -8.615850e-47 |
| Msa1318240 | Msa1460240 | 0.821414 | 4.090419e-53 | -8.615850e-47 |
| Msa1319650 | Msa1460240 | 0.820929 | 5.288891e-53 | -8.615850e-47 |
| Msa1322860 | Msa1460240 | 0.819342 | 1.221268e-52 | -8.615850e-47 |
| Msa1322890 | Msa1460240 | 0.849890 | 2.417577e-60 | -8.615850e-47 |
| Msa1324500 | Msa1460240 | 0.831555 | 1.562433e-55 | -8.615850e-47 |
| Msa1324550 | Msa1460240 | 0.827685 | 1.364772e-54 | -8.615850e-47 |
| Msa1324780 | Msa1460240 | 0.829655 | 4.559491e-55 | -8.615850e-47 |
| Msa1327050 | Msa1460240 | 0.814868 | 1.237022e-51 | -8.615850e-47 |
| Msa1331000 | Msa1460240 | 0.810608 | 1.059048e-50 | -8.615850e-47 |
| Msa0366970 | Msa1460240 | 0.813737 | 2.199486e-51 | -8.615850e-47 |
| Msa0373930 | Msa1460240 | 0.826300 | 2.926344e-54 | -8.615850e-47 |
| Msa0376350 | Msa1460240 | 0.812041 | 5.174877e-51 | -8.615850e-47 |
| Msa0380740 | Msa1460240 | 0.816363 | 5.747842e-52 | -8.615850e-47 |
| Msa0389340 | Msa1460240 | 0.804919 | 1.714468e-49 | -8.615850e-47 |
| Msa0393080 | Msa1460240 | 0.804156 | 2.472847e-49 | -8.615850e-47 |
| Msa0398710 | Msa1460240 | 0.821729 | 3.458017e-53 | -8.615850e-47 |
| Msa0410650 | Msa1460240 | 0.843742 | 1.161952e-58 | -8.615850e-47 |
| Msa0417270 | Msa1460240 | 0.805695 | 1.178928e-49 | -8.615850e-47 |
| Msa0417880 | Msa1460240 | 0.813417 | 2.586637e-51 | -8.615850e-47 |
| Msa0424790 | Msa1460240 | 0.810888 | 9.213710e-51 | -8.615850e-47 |
| Msa0433640 | Msa1460240 | 0.807936 | 3.961107e-50 | -8.615850e-47 |
| Msa0437560 | Msa1460240 | 0.807087 | 5.998956e-50 | -8.615850e-47 |
| Msa0437990 | Msa1460240 | 0.803599 | 3.227784e-49 | -8.615850e-47 |
| Msa0440750 | Msa1460240 | 0.824885 | 6.331896e-54 | -8.615850e-47 |
| Msa0461720 | Msa1460240 | 0.809284 | 2.041993e-50 | -8.615850e-47 |
| Msa0464380 | Msa1460240 | 0.807388 | 5.180471e-50 | -8.615850e-47 |
| Msa0468290 | Msa1460240 | 0.807500 | 4.904737e-50 | -8.615850e-47 |
| Msa0479170 | Msa1460240 | 0.805114 | 1.560298e-49 | -8.615850e-47 |
| Msa0480980 | Msa1460240 | 0.820734 | 5.866220e-53 | -8.615850e-47 |
| Msa0481530 | Msa1460240 | 0.804941 | 1.696412e-49 | -8.615850e-47 |
| Msa0993300 | Msa1460240 | 0.804979 | 1.665866e-49 | -8.615850e-47 |
| Msa0993600 | Msa1460240 | 0.800062 | 1.718966e-48 | -8.615850e-47 |
| Msa1014540 | Msa1460240 | 0.807253 | 5.533417e-50 | -8.615850e-47 |
| Msa1030970 | Msa1460240 | 0.800808 | 1.211352e-48 | -8.615850e-47 |
| Msa1034680 | Msa1460240 | 0.813622 | 2.331882e-51 | -8.615850e-47 |
| Msa1045200 | Msa1460240 | 0.803860 | 2.848936e-49 | -8.615850e-47 |
| Msa1075540 | Msa1460240 | 0.802865 | 4.579855e-49 | -8.615850e-47 |
| Msa1079590 | Msa1460240 | 0.802486 | 5.483935e-49 | -8.615850e-47 |
| Msa1082500 | Msa1460240 | 0.853463 | 2.350433e-61 | -8.615850e-47 |
| Msa1085200 | Msa1460240 | 0.840627 | 7.760247e-58 | -8.615850e-47 |
| Msa1085300 | Msa1460240 | 0.803998 | 2.667990e-49 | -8.615850e-47 |
| Msa1098560 | Msa1460240 | 0.803289 | 3.743071e-49 | -8.615850e-47 |
| Msa0239800 | Msa1460240 | 0.822347 | 2.486714e-53 | -8.615850e-47 |
| Msa0240110 | Msa1460240 | 0.807681 | 4.487830e-50 | -8.615850e-47 |
| Msa0240150 | Msa1460240 | 0.810555 | 1.087695e-50 | -8.615850e-47 |
| Msa0243100 | Msa1460240 | 0.837544 | 4.881756e-57 | -8.615850e-47 |
| Msa0244860 | Msa1460240 | 0.814699 | 1.348466e-51 | -8.615850e-47 |
| Msa0251240 | Msa1460240 | 0.810322 | 1.220805e-50 | -8.615850e-47 |
| Msa0261340 | Msa1460240 | 0.830332 | 3.117807e-55 | -8.615850e-47 |
| Msa0277820 | Msa1460240 | 0.817930 | 2.553916e-52 | -8.615850e-47 |
| Msa0283450 | Msa1460240 | 0.815593 | 8.539421e-52 | -8.615850e-47 |
| Msa0283520 | Msa1460240 | 0.811961 | 5.387351e-51 | -8.615850e-47 |
| Msa0284420 | Msa1460240 | 0.837646 | 4.598522e-57 | -8.615850e-47 |
| Msa0287650 | Msa1460240 | 0.835889 | 1.290240e-56 | -8.615850e-47 |
| Msa0291540 | Msa1460240 | 0.806813 | 6.854734e-50 | -8.615850e-47 |
| Msa0306300 | Msa1460240 | 0.804016 | 2.644875e-49 | -8.615850e-47 |
| Msa0309770 | Msa1460240 | 0.812594 | 3.919794e-51 | -8.615850e-47 |
| Msa0311860 | Msa1460240 | 0.831761 | 1.389939e-55 | -8.615850e-47 |
| Msa0317510 | Msa1460240 | 0.819844 | 9.379642e-53 | -8.615850e-47 |
| Msa0322690 | Msa1460240 | 0.807049 | 6.110577e-50 | -8.615850e-47 |
| Msa0332000 | Msa1460240 | 0.815442 | 9.227442e-52 | -8.615850e-47 |
| Msa0340090 | Msa1460240 | 0.808839 | 2.543055e-50 | -8.615850e-47 |
| Msa0345970 | Msa1460240 | 0.820833 | 5.564323e-53 | -8.615850e-47 |
| Msa0357340 | Msa1460240 | 0.802759 | 4.817458e-49 | -8.615850e-47 |
| Msa1108160 | Msa1460240 | 0.824033 | 1.005056e-53 | -8.615850e-47 |
| Msa1111110 | Msa1460240 | 0.824790 | 6.669765e-54 | -8.615850e-47 |
| Msa1131220 | Msa1460240 | 0.808810 | 2.579791e-50 | -8.615850e-47 |
| Msa1151910 | Msa1460240 | 0.814762 | 1.306320e-51 | -8.615850e-47 |
| Msa1154710 | Msa1460240 | 0.800487 | 1.408630e-48 | -8.615850e-47 |
| Msa1172670 | Msa1460240 | 0.806851 | 6.731077e-50 | -8.615850e-47 |
| Msa1186060 | Msa1460240 | 0.806980 | 6.320256e-50 | -8.615850e-47 |
| Msa1189430 | Msa1460240 | 0.802364 | 5.811427e-49 | -8.615850e-47 |
| Msa1204530 | Msa1460240 | 0.810856 | 9.359581e-51 | -8.615850e-47 |
| Msa1209460 | Msa1460240 | 0.802793 | 4.739887e-49 | -8.615850e-47 |
| Msa1222970 | Msa1460240 | 0.816099 | 6.584747e-52 | -8.615850e-47 |
| Msa0484780 | Msa1460240 | 0.844326 | 8.103075e-59 | -8.615850e-47 |
| Msa0488560 | Msa1460240 | 0.811504 | 6.773537e-51 | -8.615850e-47 |
| Msa0498060 | Msa1460240 | 0.805219 | 1.483698e-49 | -8.615850e-47 |
| Msa0503560 | Msa1460240 | 0.805985 | 1.024739e-49 | -8.615850e-47 |
| Msa0503580 | Msa1460240 | 0.831487 | 1.623451e-55 | -8.615850e-47 |
| Msa0507680 | Msa1460240 | 0.841765 | 3.896913e-58 | -8.615850e-47 |
| Msa0509610 | Msa1460240 | 0.826470 | 2.665350e-54 | -8.615850e-47 |
| Msa0512900 | Msa1460240 | 0.838299 | 3.123794e-57 | -8.615850e-47 |
| Msa0514030 | Msa1460240 | 0.803279 | 3.761527e-49 | -8.615850e-47 |
| Msa0516170 | Msa1460240 | 0.804752 | 1.857974e-49 | -8.615850e-47 |
| Msa0521500 | Msa1460240 | 0.808056 | 3.736081e-50 | -8.615850e-47 |
| Msa0521540 | Msa1460240 | 0.813444 | 2.552297e-51 | -8.615850e-47 |
| Msa0523460 | Msa1460240 | 0.823436 | 1.386792e-53 | -8.615850e-47 |
| Msa0536220 | Msa1460240 | 0.801684 | 8.017579e-49 | -8.615850e-47 |
| Msa0546680 | Msa1460240 | 0.808374 | 3.195474e-50 | -8.615850e-47 |
| Msa0546790 | Msa1460240 | 0.803514 | 3.361293e-49 | -8.615850e-47 |
| Msa0547490 | Msa1460240 | 0.802372 | 5.787396e-49 | -8.615850e-47 |
| Msa0555020 | Msa1460240 | 0.807668 | 4.516801e-50 | -8.615850e-47 |
| Msa0558690 | Msa1460240 | 0.804886 | 1.742137e-49 | -8.615850e-47 |
| Msa0567020 | Msa1460240 | 0.806164 | 9.395918e-50 | -8.615850e-47 |
| Msa0577500 | Msa1460240 | 0.800732 | 1.255237e-48 | -8.615850e-47 |
| Msa0581760 | Msa1460240 | 0.811502 | 6.779001e-51 | -8.615850e-47 |
| Msa0602240 | Msa1460240 | 0.819795 | 9.627730e-53 | -8.615850e-47 |
| Msa0602250 | Msa1460240 | 0.826442 | 2.707550e-54 | -8.615850e-47 |
| Msa0844240 | Msa1460240 | 0.811462 | 6.916848e-51 | -8.615850e-47 |
| Msa0858840 | Msa1460240 | 0.817762 | 2.787414e-52 | -8.615850e-47 |
| Msa0863930 | Msa1460240 | 0.807599 | 4.671278e-50 | -8.615850e-47 |
| Msa0867890 | Msa1460240 | 0.816421 | 5.580002e-52 | -8.615850e-47 |
| Msa0870640 | Msa1460240 | 0.814826 | 1.264082e-51 | -8.615850e-47 |
| Msa0871270 | Msa1460240 | 0.816288 | 5.975659e-52 | -8.615850e-47 |
| Msa0880140 | Msa1460240 | 0.865555 | 5.422887e-65 | -8.615850e-47 |
| Msa0895790 | Msa1460240 | 0.800852 | 1.186546e-48 | -8.615850e-47 |
| Msa0909120 | Msa1460240 | 0.852363 | 4.849957e-61 | -8.615850e-47 |
| Msa0909140 | Msa1460240 | 0.833016 | 6.794173e-56 | -8.615850e-47 |
| Msa0918220 | Msa1460240 | 0.805408 | 1.354183e-49 | -8.615850e-47 |
| Msa0923010 | Msa1460240 | 0.807747 | 4.346423e-50 | -8.615850e-47 |
| Msa0933230 | Msa1460240 | 0.805239 | 1.469736e-49 | -8.615850e-47 |
| Msa0935710 | Msa1460240 | 0.807262 | 5.506999e-50 | -8.615850e-47 |
| Msa0972670 | Msa1460240 | 0.818135 | 2.295214e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460240 | MtrunA17_Chr4g0028701 | 95.062 | 162 | 8 | 0 | 1 | 162 | 505 | 666 | 3.17e-102 | 307 |
| Msa1460240 | MtrunA17_Chr2g0327021 | 42.953 | 149 | 54 | 6 | 1 | 128 | 474 | 612 | 1.08e-23 | 96.3 |
| Msa1460240 | MtrunA17_Chr7g0240371 | 43.704 | 135 | 65 | 5 | 1 | 132 | 340 | 466 | 1.09e-19 | 84.7 |
| Msa1460240 | MtrunA17_Chr4g0008591 | 70.909 | 55 | 13 | 2 | 1 | 55 | 395 | 446 | 4.10e-18 | 80.5 |
| Msa1460240 | MtrunA17_Chr1g0155681 | 32.432 | 148 | 71 | 4 | 1 | 124 | 391 | 533 | 3.35e-15 | 72.0 |
| Msa1460240 | MtrunA17_Chr4g0025521 | 56.140 | 57 | 25 | 0 | 1 | 57 | 437 | 493 | 3.91e-15 | 72.0 |
| Msa1460240 | MtrunA17_Chr3g0141941 | 75.000 | 40 | 10 | 0 | 1 | 40 | 380 | 419 | 3.08e-14 | 69.3 |
| Msa1460240 | MtrunA17_Chr8g0373801 | 60.000 | 50 | 17 | 1 | 1 | 47 | 611 | 660 | 6.22e-14 | 68.6 |
| Msa1460240 | MtrunA17_Chr7g0267481 | 43.023 | 86 | 43 | 2 | 1 | 85 | 393 | 473 | 8.31e-14 | 68.2 |
| Msa1460240 | MtrunA17_Chr5g0403251 | 62.500 | 56 | 16 | 2 | 1 | 51 | 559 | 614 | 8.65e-14 | 68.2 |
| Msa1460240 | MtrunA17_Chr3g0141931 | 62.222 | 45 | 17 | 0 | 1 | 45 | 383 | 427 | 1.95e-13 | 67.0 |
| Msa1460240 | MtrunA17_Chr1g0151681 | 42.857 | 63 | 36 | 0 | 1 | 63 | 459 | 521 | 1.18e-11 | 61.6 |
| Msa1460240 | MtrunA17_Chr8g0387321 | 86.207 | 29 | 4 | 0 | 1 | 29 | 404 | 432 | 5.25e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460240 | AT2G27990.1 | 43.452 | 168 | 47 | 6 | 1 | 162 | 459 | 584 | 3.65e-28 | 109 |
| Msa1460240 | AT5G02030.1 | 94.595 | 37 | 2 | 0 | 1 | 37 | 383 | 419 | 1.80e-17 | 79.0 |
| Msa1460240 | AT2G16400.1 | 33.728 | 169 | 99 | 6 | 1 | 162 | 320 | 482 | 2.21e-14 | 70.1 |
| Msa1460240 | AT4G34610.2 | 87.879 | 33 | 4 | 0 | 1 | 33 | 349 | 381 | 9.24e-14 | 68.2 |
| Msa1460240 | AT4G34610.4 | 87.879 | 33 | 4 | 0 | 1 | 33 | 349 | 381 | 9.24e-14 | 68.2 |
| Msa1460240 | AT4G34610.3 | 87.879 | 33 | 4 | 0 | 1 | 33 | 349 | 381 | 9.24e-14 | 68.2 |
| Msa1460240 | AT4G34610.1 | 87.879 | 33 | 4 | 0 | 1 | 33 | 349 | 381 | 9.24e-14 | 68.2 |
| Msa1460240 | AT4G36870.2 | 84.848 | 33 | 5 | 0 | 1 | 33 | 533 | 565 | 1.87e-13 | 67.4 |
| Msa1460240 | AT4G36870.1 | 84.848 | 33 | 5 | 0 | 1 | 33 | 533 | 565 | 1.87e-13 | 67.4 |
| Msa1460240 | AT1G75410.1 | 62.000 | 50 | 18 | 1 | 1 | 49 | 381 | 430 | 2.50e-13 | 67.0 |
| Msa1460240 | AT1G75410.2 | 62.000 | 50 | 18 | 1 | 1 | 49 | 381 | 430 | 2.50e-13 | 67.0 |
| Msa1460240 | AT1G75430.1 | 57.407 | 54 | 20 | 1 | 1 | 51 | 237 | 290 | 3.36e-13 | 65.9 |
| Msa1460240 | AT1G19700.1 | 78.788 | 33 | 7 | 0 | 1 | 33 | 386 | 418 | 4.39e-13 | 66.2 |
| Msa1460240 | AT1G19700.3 | 78.788 | 33 | 7 | 0 | 1 | 33 | 386 | 418 | 4.39e-13 | 66.2 |
| Msa1460240 | AT1G19700.5 | 78.788 | 33 | 7 | 0 | 1 | 33 | 386 | 418 | 4.39e-13 | 66.2 |
| Msa1460240 | AT1G19700.4 | 78.788 | 33 | 7 | 0 | 1 | 33 | 386 | 418 | 4.39e-13 | 66.2 |
| Msa1460240 | AT1G19700.2 | 78.788 | 33 | 7 | 0 | 1 | 33 | 386 | 418 | 4.39e-13 | 66.2 |
| Msa1460240 | AT5G41410.1 | 71.053 | 38 | 11 | 0 | 1 | 38 | 426 | 463 | 5.58e-13 | 65.9 |
| Msa1460240 | AT2G27220.1 | 50.000 | 62 | 17 | 1 | 1 | 48 | 263 | 324 | 3.19e-12 | 63.5 |
| Msa1460240 | AT2G27220.3 | 50.000 | 62 | 17 | 1 | 1 | 48 | 263 | 324 | 3.19e-12 | 63.5 |
| Msa1460240 | AT2G27220.2 | 50.000 | 62 | 17 | 1 | 1 | 48 | 281 | 342 | 3.85e-12 | 63.5 |
Find 59 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATACCCTGGCTTTGTATT+TGG | 0.172211 | tig0040775:+1985 | Msa1460240:three_prime_UTR |
| ATTTAAATTTAATGTGATAT+TGG | 0.186069 | tig0040775:+2317 | Msa1460240:three_prime_UTR |
| ATCACTGTTGAATCCATATT+TGG | 0.216643 | tig0040775:-1677 | Msa1460240:intergenic |
| GATGGAATTGAAGGAATAAT+TGG | 0.256213 | tig0040775:+1893 | Msa1460240:three_prime_UTR |
| TGAAAAGCAATTTCAGTGTT+TGG | 0.266354 | tig0040775:+1541 | Msa1460240:CDS |
| TTTAAATTTAATGTGATATT+GGG | 0.269604 | tig0040775:+2318 | Msa1460240:three_prime_UTR |
| ACCTCAACTTTGAGGGGCTT+TGG | 0.292883 | tig0040775:-2008 | Msa1460240:intergenic |
| TGATCAGATTACACCAAATA+TGG | 0.305163 | tig0040775:+1664 | Msa1460240:CDS |
| GCAATTTCAGTGTTTGGAAA+TGG | 0.322344 | tig0040775:+1547 | Msa1460240:CDS |
| TTGGAAATGGGGTCATCTTC+AGG | 0.334212 | tig0040775:+1560 | Msa1460240:CDS |
| CAATTTCAGTGTTTGGAAAT+GGG | 0.339082 | tig0040775:+1548 | Msa1460240:CDS |
| GTAGACCTTAGACATCAATT+TGG | 0.356780 | tig0040775:+1800 | Msa1460240:CDS |
| ATAAATAATAGGTATCAAAT+TGG | 0.363771 | tig0040775:+1390 | Msa1460240:intron |
| TGGATCCGTGTCGCTGACTT+TGG | 0.383478 | tig0040775:+1721 | Msa1460240:CDS |
| TAAACGCTCGAGTCCGTGTA+TGG | 0.405578 | tig0040775:+1417 | Msa1460240:CDS |
| GCTCTCCAAATTGATGTCTA+AGG | 0.413976 | tig0040775:-1805 | Msa1460240:intergenic |
| CAATGTTTCAATGTCGCGTT+AGG | 0.424597 | tig0040775:+2182 | Msa1460240:three_prime_UTR |
| GGATCCGTGTCGCTGACTTT+GGG | 0.426105 | tig0040775:+1722 | Msa1460240:CDS |
| AGAATTGGAGATGGAATTGA+AGG | 0.429170 | tig0040775:+1884 | Msa1460240:three_prime_UTR |
| AGGCATTAACAATGCTGAAA+AGG | 0.442184 | tig0040775:+1580 | Msa1460240:CDS |
| CACATGTTAGCTACTCAAAC+AGG | 0.444126 | tig0040775:+671 | Msa1460240:exon |
| CGGTTGGTACCTCAACTTTG+AGG | 0.455515 | tig0040775:-2016 | Msa1460240:intergenic |
| CTTTGGCCAAATACAAAGCC+AGG | 0.458474 | tig0040775:-1991 | Msa1460240:intergenic |
| CTCAAAGTTGAGGTACCAAC+CGG | 0.478044 | tig0040775:+2017 | Msa1460240:three_prime_UTR |
| CAACCATTGGTTTCCATACA+CGG | 0.478260 | tig0040775:-1430 | Msa1460240:intergenic |
| CTAATTAACCCACAAAATCA+TGG | 0.480092 | tig0040775:-1835 | Msa1460240:intergenic |
| ATGTGTATTTCTTCAACCAT+TGG | 0.483354 | tig0040775:-1443 | Msa1460240:intergenic |
| ATACACATGCTTGAATCAAA+AGG | 0.494309 | tig0040775:+1458 | Msa1460240:CDS |
| GGTTGGTACCTCAACTTTGA+GGG | 0.503041 | tig0040775:-2015 | Msa1460240:intergenic |
| AAATATGGATTCAACAGTGA+TGG | 0.505789 | tig0040775:+1679 | Msa1460240:CDS |
| GCTACTTACTACTCGCAAAC+CGG | 0.516743 | tig0040775:-2036 | Msa1460240:intergenic |
| AAAGCCAGGGTATTTCACTT+TGG | 0.518948 | tig0040775:-1977 | Msa1460240:intergenic |
| AGCTAAATACAACGTGTTGA+GGG | 0.522421 | tig0040775:+2229 | Msa1460240:three_prime_UTR |
| AATTTCAGTGTTTGGAAATG+GGG | 0.530029 | tig0040775:+1549 | Msa1460240:CDS |
| TAGCTAAATACAACGTGTTG+AGG | 0.540629 | tig0040775:+2228 | Msa1460240:three_prime_UTR |
| ATGAATTGAGTCGTGGAGGT+TGG | 0.544377 | tig0040775:+1954 | Msa1460240:three_prime_UTR |
| TTGAAGGAATAATTGGAATG+AGG | 0.553356 | tig0040775:+1900 | Msa1460240:three_prime_UTR |
| AATATGGATTCAACAGTGAT+GGG | 0.554086 | tig0040775:+1680 | Msa1460240:CDS |
| GCCAAAGCCCCTCAAAGTTG+AGG | 0.565866 | tig0040775:+2007 | Msa1460240:three_prime_UTR |
| TGTAATTACACAAACGTGGA+TGG | 0.573190 | tig0040775:-2281 | Msa1460240:intergenic |
| GACACGGATCCACGTTGATA+CGG | 0.573397 | tig0040775:-1710 | Msa1460240:intergenic |
| TTATTACAAATGAAGAGCAA+TGG | 0.577328 | tig0040775:+1603 | Msa1460240:CDS |
| AGTTTAGATGAATTGAGTCG+TGG | 0.585775 | tig0040775:+1947 | Msa1460240:three_prime_UTR |
| CTGACTTTGGGTCTGAGACA+CGG | 0.590530 | tig0040775:+1734 | Msa1460240:CDS |
| GTTGGTACCTCAACTTTGAG+GGG | 0.594402 | tig0040775:-2014 | Msa1460240:intergenic |
| TTAATAATATTCAAGAGAAG+AGG | 0.603624 | tig0040775:+1627 | Msa1460240:CDS |
| ATGTGTTTATCAGTGTCTGT+AGG | 0.613757 | tig0040775:-653 | Msa1460240:intergenic |
| ATTACACAAACGTGGATGGA+GGG | 0.618066 | tig0040775:-2277 | Msa1460240:intergenic |
| CTTACTACTCGCAAACCGGT+TGG | 0.623907 | tig0040775:-2032 | Msa1460240:intergenic |
| AATTACACAAACGTGGATGG+AGG | 0.628647 | tig0040775:-2278 | Msa1460240:intergenic |
| TTAGATGAATTGAGTCGTGG+AGG | 0.632065 | tig0040775:+1950 | Msa1460240:three_prime_UTR |
| AGTCCGTGTATGGAAACCAA+TGG | 0.633260 | tig0040775:+1427 | Msa1460240:CDS |
| TAAACTTTAAGTCTAGCGAA+AGG | 0.635034 | tig0040775:-1930 | Msa1460240:intergenic |
| AACAGGTCTATCAAGAAACC+AGG | 0.637050 | tig0040775:+688 | Msa1460240:CDS |
| TTGGCCAAAGTGAAATACCC+TGG | 0.656121 | tig0040775:+1973 | Msa1460240:three_prime_UTR |
| GCAACAACAGTTGCAGCACG+AGG | 0.662230 | tig0040775:+1778 | Msa1460240:CDS |
| TAGTTGTAATTACACAAACG+TGG | 0.664338 | tig0040775:-2285 | Msa1460230:intergenic |
| TTTGGCCAAATACAAAGCCA+GGG | 0.678679 | tig0040775:-1990 | Msa1460230:intergenic |
| CAGACCCAAAGTCAGCGACA+CGG | 0.685959 | tig0040775:-1726 | Msa1460230:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATTTAATGTGATAT+TGG | + | tig0040775:2317-2336 | Msa1460240:three_prime_UTR | 10.0% |
| !! | TTTAAATTTAATGTGATATT+GGG | + | tig0040775:2318-2337 | Msa1460240:three_prime_UTR | 10.0% |
| !! | ATTTAAATTTAATGTGATAT+TGG | + | tig0040775:2317-2336 | Msa1460240:three_prime_UTR | 10.0% |
| !! | TTTAAATTTAATGTGATATT+GGG | + | tig0040775:2318-2337 | Msa1460240:three_prime_UTR | 10.0% |
| !!! | TTTTATATTATTTCTCTTGA+TGG | + | tig0040775:759-778 | Msa1460240:intron | 15.0% |
| !!! | AATTATTGATTTGAAAATCA+AGG | - | tig0040775:827-846 | Msa1460240:intergenic | 15.0% |
| !! | TGTAATAACTGATAAATAAT+AGG | + | tig0040775:1379-1398 | Msa1460240:intron | 15.0% |
| !! | ATAAATAATAGGTATCAAAT+TGG | + | tig0040775:1390-1409 | Msa1460240:intron | 15.0% |
| !!! | TTTTATATTATTTCTCTTGA+TGG | + | tig0040775:759-778 | Msa1460240:intron | 15.0% |
| !!! | AATTATTGATTTGAAAATCA+AGG | - | tig0040775:827-846 | Msa1460240:intergenic | 15.0% |
| !! | TGTAATAACTGATAAATAAT+AGG | + | tig0040775:1379-1398 | Msa1460240:intron | 15.0% |
| !! | ATAAATAATAGGTATCAAAT+TGG | + | tig0040775:1390-1409 | Msa1460240:intron | 15.0% |
| !!! | ATTTTCTGCAATTTGAATTA+TGG | + | tig0040775:1076-1095 | Msa1460240:intron | 20.0% |
| !! | TTAATAATATTCAAGAGAAG+AGG | + | tig0040775:1627-1646 | Msa1460240:CDS | 20.0% |
| !!! | ATTTTCTGCAATTTGAATTA+TGG | + | tig0040775:1076-1095 | Msa1460240:intron | 20.0% |
| !! | TTAATAATATTCAAGAGAAG+AGG | + | tig0040775:1627-1646 | Msa1460240:CDS | 20.0% |
| !! | TTTGAAAACTTCGAAGTTTT+GGG | - | tig0040775:887-906 | Msa1460240:intergenic | 25.0% |
| !! | ATTTGAAAACTTCGAAGTTT+TGG | - | tig0040775:888-907 | Msa1460240:intergenic | 25.0% |
| !! | TAATTGTTCCTTGATTGTTT+TGG | + | tig0040775:911-930 | Msa1460240:intron | 25.0% |
| ! | AATGAAAACCAAAACAATCA+AGG | - | tig0040775:922-941 | Msa1460240:intergenic | 25.0% |
| ! | ACAATAAAAACAAAGTAGCA+CGG | - | tig0040775:999-1018 | Msa1460240:intergenic | 25.0% |
| !!! | TATTATGTGTCATTTTGTTG+AGG | + | tig0040775:1302-1321 | Msa1460240:intron | 25.0% |
| ! | TCAGAACAATGATAAAAATG+AGG | + | tig0040775:1499-1518 | Msa1460240:CDS | 25.0% |
| ! | TTATTACAAATGAAGAGCAA+TGG | + | tig0040775:1603-1622 | Msa1460240:CDS | 25.0% |
| !!! | TATCATGTTTTCTAGAGAAT+TGG | + | tig0040775:1869-1888 | Msa1460240:three_prime_UTR | 25.0% |
| !! | TTTGAAAACTTCGAAGTTTT+GGG | - | tig0040775:887-906 | Msa1460240:intergenic | 25.0% |
| !! | ATTTGAAAACTTCGAAGTTT+TGG | - | tig0040775:888-907 | Msa1460240:intergenic | 25.0% |
| !! | TAATTGTTCCTTGATTGTTT+TGG | + | tig0040775:911-930 | Msa1460240:intron | 25.0% |
| ! | AATGAAAACCAAAACAATCA+AGG | - | tig0040775:922-941 | Msa1460240:intergenic | 25.0% |
| ! | ACAATAAAAACAAAGTAGCA+CGG | - | tig0040775:999-1018 | Msa1460240:intergenic | 25.0% |
| !!! | TATTATGTGTCATTTTGTTG+AGG | + | tig0040775:1302-1321 | Msa1460240:intron | 25.0% |
| ! | TCAGAACAATGATAAAAATG+AGG | + | tig0040775:1499-1518 | Msa1460240:CDS | 25.0% |
| ! | TTATTACAAATGAAGAGCAA+TGG | + | tig0040775:1603-1622 | Msa1460240:CDS | 25.0% |
| !!! | TATCATGTTTTCTAGAGAAT+TGG | + | tig0040775:1869-1888 | Msa1460240:three_prime_UTR | 25.0% |
| TTCTATTTGACATACACTCT+TGG | + | tig0040775:785-804 | Msa1460240:intron | 30.0% | |
| TCAATAATTGCACTCTTGAA+TGG | + | tig0040775:838-857 | Msa1460240:intron | 30.0% | |
| TAGTCTTCAAAAACATTCCT+AGG | - | tig0040775:1282-1301 | Msa1460240:intergenic | 30.0% | |
| !!! | GTATGTGAATTTTTTACTGC+TGG | + | tig0040775:1348-1367 | Msa1460240:intron | 30.0% |
| ATGTGTATTTCTTCAACCAT+TGG | - | tig0040775:1446-1465 | Msa1460240:intergenic | 30.0% | |
| ATACACATGCTTGAATCAAA+AGG | + | tig0040775:1458-1477 | Msa1460240:CDS | 30.0% | |
| TGAAAAGCAATTTCAGTGTT+TGG | + | tig0040775:1541-1560 | Msa1460240:CDS | 30.0% | |
| CAATTTCAGTGTTTGGAAAT+GGG | + | tig0040775:1548-1567 | Msa1460240:CDS | 30.0% | |
| AATTTCAGTGTTTGGAAATG+GGG | + | tig0040775:1549-1568 | Msa1460240:CDS | 30.0% | |
| TGATCAGATTACACCAAATA+TGG | + | tig0040775:1664-1683 | Msa1460240:CDS | 30.0% | |
| ATCACTGTTGAATCCATATT+TGG | - | tig0040775:1680-1699 | Msa1460240:intergenic | 30.0% | |
| AAATATGGATTCAACAGTGA+TGG | + | tig0040775:1679-1698 | Msa1460240:CDS | 30.0% | |
| AATATGGATTCAACAGTGAT+GGG | + | tig0040775:1680-1699 | Msa1460240:CDS | 30.0% | |
| CTAATTAACCCACAAAATCA+TGG | - | tig0040775:1838-1857 | Msa1460240:intergenic | 30.0% | |
| GATGGAATTGAAGGAATAAT+TGG | + | tig0040775:1893-1912 | Msa1460240:three_prime_UTR | 30.0% | |
| TTGAAGGAATAATTGGAATG+AGG | + | tig0040775:1900-1919 | Msa1460240:three_prime_UTR | 30.0% | |
| TAAACTTTAAGTCTAGCGAA+AGG | - | tig0040775:1933-1952 | Msa1460240:intergenic | 30.0% | |
| !! | TATAAGTTTTGTGTCACTGT+CGG | - | tig0040775:2115-2134 | Msa1460240:intergenic | 30.0% |
| TAGTTGTAATTACACAAACG+TGG | - | tig0040775:2288-2307 | Msa1460240:intergenic | 30.0% | |
| TTCTATTTGACATACACTCT+TGG | + | tig0040775:785-804 | Msa1460240:intron | 30.0% | |
| TCAATAATTGCACTCTTGAA+TGG | + | tig0040775:838-857 | Msa1460240:intron | 30.0% | |
| TAGTCTTCAAAAACATTCCT+AGG | - | tig0040775:1282-1301 | Msa1460240:intergenic | 30.0% | |
| !!! | GTATGTGAATTTTTTACTGC+TGG | + | tig0040775:1348-1367 | Msa1460240:intron | 30.0% |
| ATGTGTATTTCTTCAACCAT+TGG | - | tig0040775:1446-1465 | Msa1460240:intergenic | 30.0% | |
| ATACACATGCTTGAATCAAA+AGG | + | tig0040775:1458-1477 | Msa1460240:CDS | 30.0% | |
| TGAAAAGCAATTTCAGTGTT+TGG | + | tig0040775:1541-1560 | Msa1460240:CDS | 30.0% | |
| CAATTTCAGTGTTTGGAAAT+GGG | + | tig0040775:1548-1567 | Msa1460240:CDS | 30.0% | |
| AATTTCAGTGTTTGGAAATG+GGG | + | tig0040775:1549-1568 | Msa1460240:CDS | 30.0% | |
| TGATCAGATTACACCAAATA+TGG | + | tig0040775:1664-1683 | Msa1460240:CDS | 30.0% | |
| ATCACTGTTGAATCCATATT+TGG | - | tig0040775:1680-1699 | Msa1460240:intergenic | 30.0% | |
| AAATATGGATTCAACAGTGA+TGG | + | tig0040775:1679-1698 | Msa1460240:CDS | 30.0% | |
| AATATGGATTCAACAGTGAT+GGG | + | tig0040775:1680-1699 | Msa1460240:CDS | 30.0% | |
| CTAATTAACCCACAAAATCA+TGG | - | tig0040775:1838-1857 | Msa1460240:intergenic | 30.0% | |
| GATGGAATTGAAGGAATAAT+TGG | + | tig0040775:1893-1912 | Msa1460240:three_prime_UTR | 30.0% | |
| TTGAAGGAATAATTGGAATG+AGG | + | tig0040775:1900-1919 | Msa1460240:three_prime_UTR | 30.0% | |
| TAAACTTTAAGTCTAGCGAA+AGG | - | tig0040775:1933-1952 | Msa1460240:intergenic | 30.0% | |
| !! | TATAAGTTTTGTGTCACTGT+CGG | - | tig0040775:2115-2134 | Msa1460240:intergenic | 30.0% |
| TAGTTGTAATTACACAAACG+TGG | - | tig0040775:2288-2307 | Msa1460240:intergenic | 30.0% | |
| ATGTGTTTATCAGTGTCTGT+AGG | - | tig0040775:656-675 | None:intergenic | 35.0% | |
| ATTTGACATACACTCTTGGA+TGG | + | tig0040775:789-808 | Msa1460240:intron | 35.0% | |
| AATAGTAGTCTAGCTGCAAA+TGG | - | tig0040775:1059-1078 | Msa1460240:intergenic | 35.0% | |
| ACCATCAAATCAAGATGAGA+CGG | - | tig0040775:1200-1219 | Msa1460240:intergenic | 35.0% | |
| CACATTGCAGTTATGCAATT+TGG | - | tig0040775:1223-1242 | Msa1460240:intergenic | 35.0% | |
| CAAAAACATTCCTAGGAGAA+GGG | - | tig0040775:1275-1294 | Msa1460240:intergenic | 35.0% | |
| TCAAAAACATTCCTAGGAGA+AGG | - | tig0040775:1276-1295 | Msa1460240:intergenic | 35.0% | |
| !! | AAATTGCTTTTCATGCGTTC+CGG | - | tig0040775:1534-1553 | Msa1460240:intergenic | 35.0% |
| GCAATTTCAGTGTTTGGAAA+TGG | + | tig0040775:1547-1566 | Msa1460240:CDS | 35.0% | |
| AGGCATTAACAATGCTGAAA+AGG | + | tig0040775:1580-1599 | Msa1460240:CDS | 35.0% | |
| GTAGACCTTAGACATCAATT+TGG | + | tig0040775:1800-1819 | Msa1460240:CDS | 35.0% | |
| ! | CACATGATCCATGATTTTGT+GGG | + | tig0040775:1827-1846 | Msa1460240:CDS | 35.0% |
| !! | GTTTTCTAGAGAATTGGAGA+TGG | + | tig0040775:1875-1894 | Msa1460240:three_prime_UTR | 35.0% |
| AGAATTGGAGATGGAATTGA+AGG | + | tig0040775:1884-1903 | Msa1460240:three_prime_UTR | 35.0% | |
| AGTTTAGATGAATTGAGTCG+TGG | + | tig0040775:1947-1966 | Msa1460240:three_prime_UTR | 35.0% | |
| !! | AAATACCCTGGCTTTGTATT+TGG | + | tig0040775:1985-2004 | Msa1460240:three_prime_UTR | 35.0% |
| TAGCTAAATACAACGTGTTG+AGG | + | tig0040775:2228-2247 | Msa1460240:three_prime_UTR | 35.0% | |
| AGCTAAATACAACGTGTTGA+GGG | + | tig0040775:2229-2248 | Msa1460240:three_prime_UTR | 35.0% | |
| TGTAATTACACAAACGTGGA+TGG | - | tig0040775:2284-2303 | Msa1460240:intergenic | 35.0% | |
| ATGTGTTTATCAGTGTCTGT+AGG | - | tig0040775:656-675 | Msa1460240:intergenic | 35.0% | |
| ATTTGACATACACTCTTGGA+TGG | + | tig0040775:789-808 | Msa1460240:intron | 35.0% | |
| AATAGTAGTCTAGCTGCAAA+TGG | - | tig0040775:1059-1078 | Msa1460240:intergenic | 35.0% | |
| ACCATCAAATCAAGATGAGA+CGG | - | tig0040775:1200-1219 | Msa1460240:intergenic | 35.0% | |
| CACATTGCAGTTATGCAATT+TGG | - | tig0040775:1223-1242 | Msa1460240:intergenic | 35.0% | |
| CAAAAACATTCCTAGGAGAA+GGG | - | tig0040775:1275-1294 | Msa1460240:intergenic | 35.0% | |
| TCAAAAACATTCCTAGGAGA+AGG | - | tig0040775:1276-1295 | Msa1460240:intergenic | 35.0% | |
| !! | AAATTGCTTTTCATGCGTTC+CGG | - | tig0040775:1534-1553 | Msa1460240:intergenic | 35.0% |
| GCAATTTCAGTGTTTGGAAA+TGG | + | tig0040775:1547-1566 | Msa1460240:CDS | 35.0% | |
| AGGCATTAACAATGCTGAAA+AGG | + | tig0040775:1580-1599 | Msa1460240:CDS | 35.0% | |
| GTAGACCTTAGACATCAATT+TGG | + | tig0040775:1800-1819 | Msa1460240:CDS | 35.0% | |
| ! | CACATGATCCATGATTTTGT+GGG | + | tig0040775:1827-1846 | Msa1460240:CDS | 35.0% |
| !! | GTTTTCTAGAGAATTGGAGA+TGG | + | tig0040775:1875-1894 | Msa1460240:three_prime_UTR | 35.0% |
| AGAATTGGAGATGGAATTGA+AGG | + | tig0040775:1884-1903 | Msa1460240:three_prime_UTR | 35.0% | |
| AGTTTAGATGAATTGAGTCG+TGG | + | tig0040775:1947-1966 | Msa1460240:three_prime_UTR | 35.0% | |
| !! | AAATACCCTGGCTTTGTATT+TGG | + | tig0040775:1985-2004 | Msa1460240:three_prime_UTR | 35.0% |
| TAGCTAAATACAACGTGTTG+AGG | + | tig0040775:2228-2247 | Msa1460240:three_prime_UTR | 35.0% | |
| AGCTAAATACAACGTGTTGA+GGG | + | tig0040775:2229-2248 | Msa1460240:three_prime_UTR | 35.0% | |
| TGTAATTACACAAACGTGGA+TGG | - | tig0040775:2284-2303 | Msa1460240:intergenic | 35.0% | |
| CACATGTTAGCTACTCAAAC+AGG | + | tig0040775:671-690 | Msa1460240:exon | 40.0% | |
| AACAGGTCTATCAAGAAACC+AGG | + | tig0040775:688-707 | Msa1460240:CDS | 40.0% | |
| CCATATTGCTTAGCTGCAAA+TGG | - | tig0040775:1106-1125 | Msa1460240:intergenic | 40.0% | |
| CCATTTGCAGCTAAGCAATA+TGG | + | tig0040775:1103-1122 | Msa1460240:intron | 40.0% | |
| AATGTGAGTCATCCATCTGA+TGG | - | tig0040775:1134-1153 | Msa1460240:intergenic | 40.0% | |
| ! | TCCGTCTCATCTTGATTTGA+TGG | + | tig0040775:1196-1215 | Msa1460240:intron | 40.0% |
| TGATCTTTATCCCTTCTCCT+AGG | + | tig0040775:1262-1281 | Msa1460240:intron | 40.0% | |
| !! | CAACCATTGGTTTCCATACA+CGG | - | tig0040775:1433-1452 | Msa1460240:intergenic | 40.0% |
| GCTCTCCAAATTGATGTCTA+AGG | - | tig0040775:1808-1827 | Msa1460240:intergenic | 40.0% | |
| ! | GCACATGATCCATGATTTTG+TGG | + | tig0040775:1826-1845 | Msa1460240:CDS | 40.0% |
| TTAGATGAATTGAGTCGTGG+AGG | + | tig0040775:1950-1969 | Msa1460240:three_prime_UTR | 40.0% | |
| ! | AAAGCCAGGGTATTTCACTT+TGG | - | tig0040775:1980-1999 | Msa1460240:intergenic | 40.0% |
| TTTGGCCAAATACAAAGCCA+GGG | - | tig0040775:1993-2012 | Msa1460240:intergenic | 40.0% | |
| CAATGTTTCAATGTCGCGTT+AGG | + | tig0040775:2182-2201 | Msa1460240:three_prime_UTR | 40.0% | |
| ! | GTGTTGAGGGCTTTTCATTT+CGG | + | tig0040775:2242-2261 | Msa1460240:three_prime_UTR | 40.0% |
| ATTACACAAACGTGGATGGA+GGG | - | tig0040775:2280-2299 | Msa1460240:intergenic | 40.0% | |
| AATTACACAAACGTGGATGG+AGG | - | tig0040775:2281-2300 | Msa1460240:intergenic | 40.0% | |
| CACATGTTAGCTACTCAAAC+AGG | + | tig0040775:671-690 | Msa1460240:exon | 40.0% | |
| AACAGGTCTATCAAGAAACC+AGG | + | tig0040775:688-707 | Msa1460240:CDS | 40.0% | |
| CCATATTGCTTAGCTGCAAA+TGG | - | tig0040775:1106-1125 | Msa1460240:intergenic | 40.0% | |
| CCATTTGCAGCTAAGCAATA+TGG | + | tig0040775:1103-1122 | Msa1460240:intron | 40.0% | |
| AATGTGAGTCATCCATCTGA+TGG | - | tig0040775:1134-1153 | Msa1460240:intergenic | 40.0% | |
| ! | TCCGTCTCATCTTGATTTGA+TGG | + | tig0040775:1196-1215 | Msa1460240:intron | 40.0% |
| TGATCTTTATCCCTTCTCCT+AGG | + | tig0040775:1262-1281 | Msa1460240:intron | 40.0% | |
| !! | CAACCATTGGTTTCCATACA+CGG | - | tig0040775:1433-1452 | Msa1460240:intergenic | 40.0% |
| GCTCTCCAAATTGATGTCTA+AGG | - | tig0040775:1808-1827 | Msa1460240:intergenic | 40.0% | |
| ! | GCACATGATCCATGATTTTG+TGG | + | tig0040775:1826-1845 | Msa1460240:CDS | 40.0% |
| TTAGATGAATTGAGTCGTGG+AGG | + | tig0040775:1950-1969 | Msa1460240:three_prime_UTR | 40.0% | |
| ! | AAAGCCAGGGTATTTCACTT+TGG | - | tig0040775:1980-1999 | Msa1460240:intergenic | 40.0% |
| TTTGGCCAAATACAAAGCCA+GGG | - | tig0040775:1993-2012 | Msa1460240:intergenic | 40.0% | |
| CAATGTTTCAATGTCGCGTT+AGG | + | tig0040775:2182-2201 | Msa1460240:three_prime_UTR | 40.0% | |
| ! | GTGTTGAGGGCTTTTCATTT+CGG | + | tig0040775:2242-2261 | Msa1460240:three_prime_UTR | 40.0% |
| ATTACACAAACGTGGATGGA+GGG | - | tig0040775:2280-2299 | Msa1460240:intergenic | 40.0% | |
| AATTACACAAACGTGGATGG+AGG | - | tig0040775:2281-2300 | Msa1460240:intergenic | 40.0% | |
| AGGTCTATCAAGAAACCAGG+TGG | + | tig0040775:691-710 | Msa1460240:intron | 45.0% | |
| GGTCTATCAAGAAACCAGGT+GGG | + | tig0040775:692-711 | Msa1460240:intron | 45.0% | |
| GTCTATCAAGAAACCAGGTG+GGG | + | tig0040775:693-712 | Msa1460240:intron | 45.0% | |
| TCTATCAAGAAACCAGGTGG+GGG | + | tig0040775:694-713 | Msa1460240:intron | 45.0% | |
| AATATGGACCGTCCATCAGA+TGG | + | tig0040775:1119-1138 | Msa1460240:intron | 45.0% | |
| TGAGTCATCCATCTGATGGA+CGG | - | tig0040775:1130-1149 | Msa1460240:intergenic | 45.0% | |
| GGGATAAAGATCACTTGCAG+CGG | - | tig0040775:1255-1274 | Msa1460240:intergenic | 45.0% | |
| AGTCCGTGTATGGAAACCAA+TGG | + | tig0040775:1427-1446 | Msa1460240:CDS | 45.0% | |
| AAAAATGAGGCATGCAGAGC+CGG | + | tig0040775:1512-1531 | Msa1460240:CDS | 45.0% | |
| TTGGAAATGGGGTCATCTTC+AGG | + | tig0040775:1560-1579 | Msa1460240:CDS | 45.0% | |
| !! | GGTTTTATGCCGTATCAACG+TGG | + | tig0040775:1701-1720 | Msa1460240:CDS | 45.0% |
| ATGAATTGAGTCGTGGAGGT+TGG | + | tig0040775:1954-1973 | Msa1460240:three_prime_UTR | 45.0% | |
| TTGGCCAAAGTGAAATACCC+TGG | + | tig0040775:1973-1992 | Msa1460240:three_prime_UTR | 45.0% | |
| CTTTGGCCAAATACAAAGCC+AGG | - | tig0040775:1994-2013 | Msa1460240:intergenic | 45.0% | |
| GTTGGTACCTCAACTTTGAG+GGG | - | tig0040775:2017-2036 | Msa1460240:intergenic | 45.0% | |
| ! | GGTTGGTACCTCAACTTTGA+GGG | - | tig0040775:2018-2037 | Msa1460240:intergenic | 45.0% |
| ! | CTCAAAGTTGAGGTACCAAC+CGG | + | tig0040775:2017-2036 | Msa1460240:three_prime_UTR | 45.0% |
| GCTACTTACTACTCGCAAAC+CGG | - | tig0040775:2039-2058 | Msa1460240:intergenic | 45.0% | |
| !! | TTTTGTGTCACTGTCGGACT+TGG | - | tig0040775:2109-2128 | Msa1460240:intergenic | 45.0% |
| AGGTCTATCAAGAAACCAGG+TGG | + | tig0040775:691-710 | Msa1460240:intron | 45.0% | |
| GGTCTATCAAGAAACCAGGT+GGG | + | tig0040775:692-711 | Msa1460240:intron | 45.0% | |
| GTCTATCAAGAAACCAGGTG+GGG | + | tig0040775:693-712 | Msa1460240:intron | 45.0% | |
| TCTATCAAGAAACCAGGTGG+GGG | + | tig0040775:694-713 | Msa1460240:intron | 45.0% | |
| AATATGGACCGTCCATCAGA+TGG | + | tig0040775:1119-1138 | Msa1460240:intron | 45.0% | |
| TGAGTCATCCATCTGATGGA+CGG | - | tig0040775:1130-1149 | Msa1460240:intergenic | 45.0% | |
| GGGATAAAGATCACTTGCAG+CGG | - | tig0040775:1255-1274 | Msa1460240:intergenic | 45.0% | |
| AGTCCGTGTATGGAAACCAA+TGG | + | tig0040775:1427-1446 | Msa1460240:CDS | 45.0% | |
| AAAAATGAGGCATGCAGAGC+CGG | + | tig0040775:1512-1531 | Msa1460240:CDS | 45.0% | |
| TTGGAAATGGGGTCATCTTC+AGG | + | tig0040775:1560-1579 | Msa1460240:CDS | 45.0% | |
| !! | GGTTTTATGCCGTATCAACG+TGG | + | tig0040775:1701-1720 | Msa1460240:CDS | 45.0% |
| ATGAATTGAGTCGTGGAGGT+TGG | + | tig0040775:1954-1973 | Msa1460240:three_prime_UTR | 45.0% | |
| TTGGCCAAAGTGAAATACCC+TGG | + | tig0040775:1973-1992 | Msa1460240:three_prime_UTR | 45.0% | |
| CTTTGGCCAAATACAAAGCC+AGG | - | tig0040775:1994-2013 | Msa1460240:intergenic | 45.0% | |
| GTTGGTACCTCAACTTTGAG+GGG | - | tig0040775:2017-2036 | Msa1460240:intergenic | 45.0% | |
| ! | GGTTGGTACCTCAACTTTGA+GGG | - | tig0040775:2018-2037 | Msa1460240:intergenic | 45.0% |
| ! | CTCAAAGTTGAGGTACCAAC+CGG | + | tig0040775:2017-2036 | Msa1460240:three_prime_UTR | 45.0% |
| GCTACTTACTACTCGCAAAC+CGG | - | tig0040775:2039-2058 | Msa1460240:intergenic | 45.0% | |
| !! | TTTTGTGTCACTGTCGGACT+TGG | - | tig0040775:2109-2128 | Msa1460240:intergenic | 45.0% |
| AAAAGAAGTAGACCCCCACC+TGG | - | tig0040775:709-728 | Msa1460240:intergenic | 50.0% | |
| AAAGATCACTTGCAGCGGCA+AGG | - | tig0040775:1250-1269 | Msa1460240:intergenic | 50.0% | |
| TAAACGCTCGAGTCCGTGTA+TGG | + | tig0040775:1417-1436 | Msa1460240:CDS | 50.0% | |
| GACACGGATCCACGTTGATA+CGG | - | tig0040775:1713-1732 | Msa1460240:intergenic | 50.0% | |
| ! | CTGACTTTGGGTCTGAGACA+CGG | + | tig0040775:1734-1753 | Msa1460240:CDS | 50.0% |
| ! | ACCTCAACTTTGAGGGGCTT+TGG | - | tig0040775:2011-2030 | Msa1460240:intergenic | 50.0% |
| ! | CGGTTGGTACCTCAACTTTG+AGG | - | tig0040775:2019-2038 | Msa1460240:intergenic | 50.0% |
| CTTACTACTCGCAAACCGGT+TGG | - | tig0040775:2035-2054 | Msa1460240:intergenic | 50.0% | |
| AAAAGAAGTAGACCCCCACC+TGG | - | tig0040775:709-728 | Msa1460240:intergenic | 50.0% | |
| AAAGATCACTTGCAGCGGCA+AGG | - | tig0040775:1250-1269 | Msa1460240:intergenic | 50.0% | |
| TAAACGCTCGAGTCCGTGTA+TGG | + | tig0040775:1417-1436 | Msa1460240:CDS | 50.0% | |
| GACACGGATCCACGTTGATA+CGG | - | tig0040775:1713-1732 | Msa1460240:intergenic | 50.0% | |
| ! | CTGACTTTGGGTCTGAGACA+CGG | + | tig0040775:1734-1753 | Msa1460240:CDS | 50.0% |
| ! | ACCTCAACTTTGAGGGGCTT+TGG | - | tig0040775:2011-2030 | Msa1460240:intergenic | 50.0% |
| ! | CGGTTGGTACCTCAACTTTG+AGG | - | tig0040775:2019-2038 | Msa1460240:intergenic | 50.0% |
| CTTACTACTCGCAAACCGGT+TGG | - | tig0040775:2035-2054 | Msa1460240:intergenic | 50.0% | |
| !! | TGGATCCGTGTCGCTGACTT+TGG | + | tig0040775:1721-1740 | Msa1460240:CDS | 55.0% |
| !! | GGATCCGTGTCGCTGACTTT+GGG | + | tig0040775:1722-1741 | Msa1460240:CDS | 55.0% |
| CAGACCCAAAGTCAGCGACA+CGG | - | tig0040775:1729-1748 | Msa1460240:intergenic | 55.0% | |
| GCAACAACAGTTGCAGCACG+AGG | + | tig0040775:1778-1797 | Msa1460240:CDS | 55.0% | |
| GCCAAAGCCCCTCAAAGTTG+AGG | + | tig0040775:2007-2026 | Msa1460240:three_prime_UTR | 55.0% | |
| !! | TGGATCCGTGTCGCTGACTT+TGG | + | tig0040775:1721-1740 | Msa1460240:CDS | 55.0% |
| !! | GGATCCGTGTCGCTGACTTT+GGG | + | tig0040775:1722-1741 | Msa1460240:CDS | 55.0% |
| CAGACCCAAAGTCAGCGACA+CGG | - | tig0040775:1729-1748 | Msa1460240:intergenic | 55.0% | |
| GCAACAACAGTTGCAGCACG+AGG | + | tig0040775:1778-1797 | Msa1460240:CDS | 55.0% | |
| GCCAAAGCCCCTCAAAGTTG+AGG | + | tig0040775:2007-2026 | Msa1460240:three_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0040775 | gene | 630 | 2341 | 630 | ID=Msa1460240;Name=Msa1460240 |
| tig0040775 | mRNA | 630 | 2341 | 630 | ID=Msa1460240-mRNA-1;Parent=Msa1460240;Name=Msa1460240-mRNA-1;_AED=0.00;_eAED=0.00;_QI=44|1|1|1|1|1|2|488|162 |
| tig0040775 | exon | 630 | 709 | 630 | ID=Msa1460240-mRNA-1:exon:22641;Parent=Msa1460240-mRNA-1 |
| tig0040775 | exon | 1401 | 2341 | 1401 | ID=Msa1460240-mRNA-1:exon:22642;Parent=Msa1460240-mRNA-1 |
| tig0040775 | five_prime_UTR | 630 | 673 | 630 | ID=Msa1460240-mRNA-1:five_prime_utr;Parent=Msa1460240-mRNA-1 |
| tig0040775 | CDS | 674 | 709 | 674 | ID=Msa1460240-mRNA-1:cds;Parent=Msa1460240-mRNA-1 |
| tig0040775 | CDS | 1401 | 1853 | 1401 | ID=Msa1460240-mRNA-1:cds;Parent=Msa1460240-mRNA-1 |
| tig0040775 | three_prime_UTR | 1854 | 2341 | 1854 | ID=Msa1460240-mRNA-1:three_prime_utr;Parent=Msa1460240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
