Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567520 | XP_013446808.1 | 100.000 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 2.39e-151 | 428 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567520 | sp|Q9SID8|RAH1D_ARATH | 87.923 | 207 | 25 | 0 | 1 | 207 | 1 | 207 | 1.10e-136 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567520 | A0A072U4T2 | 100.000 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 1.14e-151 | 428 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0567520 | 0.816032 | 6.816277e-52 | -8.615850e-47 |
| Msa0012200 | Msa0567520 | 0.823682 | 1.214610e-53 | -8.615850e-47 |
| Msa0030700 | Msa0567520 | 0.803932 | 2.752536e-49 | -8.615850e-47 |
| Msa0032080 | Msa0567520 | 0.801219 | 9.983960e-49 | -8.615850e-47 |
| Msa0051960 | Msa0567520 | 0.861415 | 1.042584e-63 | -8.615850e-47 |
| Msa0061220 | Msa0567520 | 0.821476 | 3.957476e-53 | -8.615850e-47 |
| Msa0076290 | Msa0567520 | 0.805461 | 1.319843e-49 | -8.615850e-47 |
| Msa0078120 | Msa0567520 | 0.804534 | 2.062586e-49 | -8.615850e-47 |
| Msa0090510 | Msa0567520 | 0.802778 | 4.774464e-49 | -8.615850e-47 |
| Msa0094710 | Msa0567520 | 0.804512 | 2.085183e-49 | -8.615850e-47 |
| Msa0095940 | Msa0567520 | 0.815877 | 7.380230e-52 | -8.615850e-47 |
| Msa0101960 | Msa0567520 | 0.862906 | 3.634847e-64 | -8.615850e-47 |
| Msa0108760 | Msa0567520 | 0.804800 | 1.815079e-49 | -8.615850e-47 |
| Msa0117520 | Msa0567520 | 0.855118 | 7.817717e-62 | -8.615850e-47 |
| Msa0160960 | Msa0567520 | 0.841147 | 5.668796e-58 | -8.615850e-47 |
| Msa0220400 | Msa0567520 | -0.805334 | 1.403917e-49 | -8.615850e-47 |
| Msa0374890 | Msa0567520 | 0.807408 | 5.129406e-50 | -8.615850e-47 |
| Msa0386010 | Msa0567520 | 0.804342 | 2.261512e-49 | -8.615850e-47 |
| Msa0403470 | Msa0567520 | -0.817555 | 3.103053e-52 | -8.615850e-47 |
| Msa0412260 | Msa0567520 | 0.813414 | 2.590947e-51 | -8.615850e-47 |
| Msa0431900 | Msa0567520 | 0.829049 | 6.397991e-55 | -8.615850e-47 |
| Msa0456770 | Msa0567520 | 0.801828 | 7.487707e-49 | -8.615850e-47 |
| Msa0468890 | Msa0567520 | 0.807265 | 5.500605e-50 | -8.615850e-47 |
| Msa0470880 | Msa0567520 | 0.810333 | 1.214494e-50 | -8.615850e-47 |
| Msa0259680 | Msa0567520 | 0.800532 | 1.378736e-48 | -8.615850e-47 |
| Msa0271540 | Msa0567520 | 0.811864 | 5.656329e-51 | -8.615850e-47 |
| Msa0302840 | Msa0567520 | 0.801930 | 7.137144e-49 | -8.615850e-47 |
| Msa0319260 | Msa0567520 | 0.807572 | 4.733409e-50 | -8.615850e-47 |
| Msa0341480 | Msa0567520 | 0.808065 | 3.719837e-50 | -8.615850e-47 |
| Msa0490320 | Msa0567520 | 0.811915 | 5.512696e-51 | -8.615850e-47 |
| Msa0520770 | Msa0567520 | 0.824638 | 7.243151e-54 | -8.615850e-47 |
| Msa0528990 | Msa0567520 | 0.804380 | 2.221645e-49 | -8.615850e-47 |
| Msa0545050 | Msa0567520 | 0.853710 | 1.996484e-61 | -8.615850e-47 |
| Msa0548650 | Msa0567520 | -0.820726 | 5.889252e-53 | -8.615850e-47 |
| Msa0556660 | Msa0567520 | 0.801949 | 7.071471e-49 | -8.615850e-47 |
| Msa0558390 | Msa0567520 | 0.801558 | 8.508866e-49 | -8.615850e-47 |
| Msa0558650 | Msa0567520 | 0.800041 | 1.735489e-48 | -8.615850e-47 |
| Msa0567370 | Msa0567520 | 0.830259 | 3.248644e-55 | -8.615850e-47 |
| Msa0567430 | Msa0567520 | 0.879766 | 9.529783e-70 | -8.615850e-47 |
| Msa0567480 | Msa0567520 | 0.927366 | 1.298327e-91 | -8.615850e-47 |
| Msa0567520 | Msa0574930 | 0.847248 | 1.304137e-59 | -8.615850e-47 |
| Msa0567520 | Msa0600590 | 0.863250 | 2.845540e-64 | -8.615850e-47 |
| Msa0567520 | Msa0613420 | 0.828275 | 9.843089e-55 | -8.615850e-47 |
| Msa0567520 | Msa0635270 | 0.806248 | 9.020065e-50 | -8.615850e-47 |
| Msa0567520 | Msa0641130 | 0.862954 | 3.514709e-64 | -8.615850e-47 |
| Msa0567520 | Msa0673120 | 0.806628 | 7.502204e-50 | -8.615850e-47 |
| Msa0567520 | Msa0679670 | 0.808850 | 2.528507e-50 | -8.615850e-47 |
| Msa0567520 | Msa0697590 | 0.801446 | 8.971027e-49 | -8.615850e-47 |
| Msa0567520 | Msa0703810 | 0.834826 | 2.394121e-56 | -8.615850e-47 |
| Msa0567520 | Msa0715670 | 0.819283 | 1.259715e-52 | -8.615850e-47 |
| Msa0567520 | Msa0742430 | 0.826759 | 2.274886e-54 | -8.615850e-47 |
| Msa0567520 | Msa0744640 | 0.831472 | 1.637413e-55 | -8.615850e-47 |
| Msa0567520 | Msa0764070 | 0.809220 | 2.107700e-50 | -8.615850e-47 |
| Msa0567520 | Msa0775160 | 0.826838 | 2.177263e-54 | -8.615850e-47 |
| Msa0567520 | Msa0795340 | 0.816475 | 5.424149e-52 | -8.615850e-47 |
| Msa0567520 | Msa0823540 | 0.839110 | 1.927465e-57 | -8.615850e-47 |
| Msa0567520 | Msa0833270 | 0.832436 | 9.463142e-56 | -8.615850e-47 |
| Msa0567520 | Msa0841730 | 0.832508 | 9.080313e-56 | -8.615850e-47 |
| Msa0567520 | Msa0852790 | 0.809831 | 1.557442e-50 | -8.615850e-47 |
| Msa0567520 | Msa0862620 | 0.824216 | 9.103071e-54 | -8.615850e-47 |
| Msa0567520 | Msa0870510 | 0.805865 | 1.086098e-49 | -8.615850e-47 |
| Msa0567520 | Msa0878220 | 0.823020 | 1.734040e-53 | -8.615850e-47 |
| Msa0567520 | Msa0930740 | 0.816545 | 5.231951e-52 | -8.615850e-47 |
| Msa0567520 | Msa0943970 | 0.810343 | 1.208594e-50 | -8.615850e-47 |
| Msa0567520 | Msa0944020 | 0.818147 | 2.281151e-52 | -8.615850e-47 |
| Msa0567520 | Msa0968470 | -0.827856 | 1.241784e-54 | -8.615850e-47 |
| Msa0567520 | Msa0982090 | -0.800582 | 1.347283e-48 | -8.615850e-47 |
| Msa0567520 | Msa0994910 | 0.806621 | 7.525667e-50 | -8.615850e-47 |
| Msa0567520 | Msa1011250 | 0.806250 | 9.011693e-50 | -8.615850e-47 |
| Msa0567520 | Msa1023310 | 0.820663 | 6.088358e-53 | -8.615850e-47 |
| Msa0567520 | Msa1031460 | 0.832042 | 1.184719e-55 | -8.615850e-47 |
| Msa0567520 | Msa1062040 | 0.835994 | 1.213244e-56 | -8.615850e-47 |
| Msa0567520 | Msa1070540 | 0.837472 | 5.095453e-57 | -8.615850e-47 |
| Msa0567520 | Msa1082520 | 0.815045 | 1.130542e-51 | -8.615850e-47 |
| Msa0567520 | Msa1101240 | 0.836729 | 7.891160e-57 | -8.615850e-47 |
| Msa0567520 | Msa1107200 | 0.813406 | 2.600892e-51 | -8.615850e-47 |
| Msa0567520 | Msa1133700 | 0.805528 | 1.277900e-49 | -8.615850e-47 |
| Msa0567520 | Msa1140630 | 0.809908 | 1.499744e-50 | -8.615850e-47 |
| Msa0567520 | Msa1158390 | 0.820387 | 7.046293e-53 | -8.615850e-47 |
| Msa0567520 | Msa1159170 | 0.807449 | 5.027488e-50 | -8.615850e-47 |
| Msa0567520 | Msa1160560 | 0.825315 | 5.012606e-54 | -8.615850e-47 |
| Msa0567520 | Msa1168640 | 0.808165 | 3.541128e-50 | -8.615850e-47 |
| Msa0567520 | Msa1180720 | 0.825408 | 4.764169e-54 | -8.615850e-47 |
| Msa0567520 | Msa1181140 | 0.817969 | 2.503115e-52 | -8.615850e-47 |
| Msa0567520 | Msa1208450 | -0.801864 | 7.361898e-49 | -8.615850e-47 |
| Msa0567520 | Msa1208990 | 0.809412 | 1.916402e-50 | -8.615850e-47 |
| Msa0567520 | Msa1212050 | 0.840234 | 9.833196e-58 | -8.615850e-47 |
| Msa0567520 | Msa1212130 | 0.808771 | 2.629029e-50 | -8.615850e-47 |
| Msa0567520 | Msa1213890 | 0.815982 | 6.992085e-52 | -8.615850e-47 |
| Msa0567520 | Msa1214170 | 0.807142 | 5.840438e-50 | -8.615850e-47 |
| Msa0567520 | Msa1231710 | 0.824908 | 6.253482e-54 | -8.615850e-47 |
| Msa0567520 | Msa1236440 | 0.833564 | 4.961118e-56 | -8.615850e-47 |
| Msa0567520 | Msa1238600 | 0.838831 | 2.276753e-57 | -8.615850e-47 |
| Msa0567520 | Msa1239620 | 0.805494 | 1.299002e-49 | -8.615850e-47 |
| Msa0567520 | Msa1246360 | 0.811649 | 6.298735e-51 | -8.615850e-47 |
| Msa0567520 | Msa1256060 | 0.823645 | 1.238971e-53 | -8.615850e-47 |
| Msa0567520 | Msa1259860 | 0.821425 | 4.064894e-53 | -8.615850e-47 |
| Msa0567520 | Msa1272010 | 0.816944 | 4.258171e-52 | -8.615850e-47 |
| Msa0567520 | Msa1275510 | 0.811330 | 7.390622e-51 | -8.615850e-47 |
| Msa0567520 | Msa1277670 | 0.837456 | 5.143059e-57 | -8.615850e-47 |
| Msa0567520 | Msa1286210 | 0.803720 | 3.047005e-49 | -8.615850e-47 |
| Msa0567520 | Msa1289090 | 0.805804 | 1.118602e-49 | -8.615850e-47 |
| Msa0567520 | Msa1296240 | 0.800554 | 1.364966e-48 | -8.615850e-47 |
| Msa0567520 | Msa1298390 | -0.828527 | 8.556055e-55 | -8.615850e-47 |
| Msa0567520 | Msa1312440 | 0.823954 | 1.048639e-53 | -8.615850e-47 |
| Msa0567520 | Msa1319560 | 0.823977 | 1.035719e-53 | -8.615850e-47 |
| Msa0567520 | Msa1325410 | -0.801921 | 7.167000e-49 | -8.615850e-47 |
| Msa0567520 | Msa1346840 | 0.802040 | 6.774153e-49 | -8.615850e-47 |
| Msa0567520 | Msa1360020 | 0.802442 | 5.598699e-49 | -8.615850e-47 |
| Msa0567520 | Msa1367790 | 0.809593 | 1.753000e-50 | -8.615850e-47 |
| Msa0567520 | Msa1368610 | 0.829768 | 4.280191e-55 | -8.615850e-47 |
| Msa0567520 | Msa1369920 | -0.832918 | 7.186390e-56 | -8.615850e-47 |
| Msa0567520 | Msa1380220 | 0.813966 | 1.958578e-51 | -8.615850e-47 |
| Msa0567520 | Msa1382380 | -0.800079 | 1.705032e-48 | -8.615850e-47 |
| Msa0567520 | Msa1386890 | 0.800325 | 1.519417e-48 | -8.615850e-47 |
| Msa0567520 | Msa1400200 | 0.800490 | 1.406583e-48 | -8.615850e-47 |
| Msa0567520 | Msa1407760 | 0.848023 | 7.980385e-60 | -8.615850e-47 |
| Msa0567520 | Msa1410550 | 0.811472 | 6.882956e-51 | -8.615850e-47 |
| Msa0567520 | Msa1415410 | 0.844687 | 6.479416e-59 | -8.615850e-47 |
| Msa0567520 | Msa1419690 | 0.802158 | 6.406417e-49 | -8.615850e-47 |
| Msa0567520 | Msa1419840 | 0.823499 | 1.340328e-53 | -8.615850e-47 |
| Msa0567520 | Msa1437730 | 0.849508 | 3.092157e-60 | -8.615850e-47 |
| Msa0567520 | Msa1450440 | 0.816235 | 6.139143e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567520 | MtrunA17_Chr8g0382221 | 100.000 | 207 | 0 | 0 | 1 | 207 | 1 | 207 | 2.19e-155 | 428 |
| Msa0567520 | MtrunA17_Chr3g0123971 | 93.720 | 207 | 12 | 1 | 1 | 207 | 1 | 206 | 7.88e-143 | 396 |
| Msa0567520 | MtrunA17_Chr5g0400131 | 84.058 | 207 | 33 | 0 | 1 | 207 | 1 | 207 | 1.02e-130 | 365 |
| Msa0567520 | MtrunA17_Chr4g0055081 | 84.541 | 207 | 31 | 1 | 1 | 207 | 1 | 206 | 2.07e-130 | 365 |
| Msa0567520 | MtrunA17_Chr1g0199331 | 47.561 | 164 | 85 | 1 | 9 | 171 | 31 | 194 | 4.94e-51 | 163 |
| Msa0567520 | MtrunA17_Chr5g0433561 | 44.099 | 161 | 90 | 0 | 11 | 171 | 12 | 172 | 2.99e-49 | 159 |
| Msa0567520 | MtrunA17_Chr3g0109721 | 43.478 | 161 | 91 | 0 | 11 | 171 | 12 | 172 | 4.05e-48 | 156 |
| Msa0567520 | MtrunA17_Chr8g0390561 | 44.720 | 161 | 89 | 0 | 11 | 171 | 11 | 171 | 5.57e-47 | 153 |
| Msa0567520 | MtrunA17_Chr8g0349711 | 44.099 | 161 | 90 | 0 | 10 | 170 | 7 | 167 | 1.91e-46 | 152 |
| Msa0567520 | MtrunA17_Chr4g0032201 | 36.408 | 206 | 118 | 3 | 10 | 206 | 13 | 214 | 2.19e-45 | 149 |
| Msa0567520 | MtrunA17_Chr2g0276931 | 39.267 | 191 | 113 | 1 | 10 | 197 | 10 | 200 | 4.42e-45 | 148 |
| Msa0567520 | MtrunA17_Chr8g0349681 | 44.720 | 161 | 89 | 0 | 10 | 170 | 176 | 336 | 1.58e-44 | 155 |
| Msa0567520 | MtrunA17_Chr8g0349681 | 41.358 | 162 | 95 | 0 | 10 | 171 | 14 | 175 | 7.00e-41 | 146 |
| Msa0567520 | MtrunA17_Chr8g0349681 | 42.857 | 161 | 92 | 0 | 10 | 170 | 385 | 545 | 9.89e-41 | 145 |
| Msa0567520 | MtrunA17_Chr8g0351861 | 38.509 | 161 | 99 | 0 | 10 | 170 | 17 | 177 | 1.48e-43 | 145 |
| Msa0567520 | MtrunA17_Chr7g0250531 | 38.000 | 200 | 114 | 2 | 10 | 206 | 9 | 201 | 2.22e-43 | 144 |
| Msa0567520 | MtrunA17_Chr2g0290891 | 38.509 | 161 | 99 | 0 | 10 | 170 | 7 | 167 | 3.09e-43 | 144 |
| Msa0567520 | MtrunA17_Chr6g0458081 | 39.130 | 161 | 98 | 0 | 10 | 170 | 7 | 167 | 4.76e-43 | 143 |
| Msa0567520 | MtrunA17_Chr4g0055651 | 37.056 | 197 | 120 | 1 | 10 | 206 | 9 | 201 | 5.87e-43 | 143 |
| Msa0567520 | MtrunA17_Chr3g0123821 | 34.848 | 198 | 113 | 2 | 10 | 207 | 17 | 198 | 1.28e-42 | 142 |
| Msa0567520 | MtrunA17_Chr3g0112681 | 34.466 | 206 | 123 | 2 | 10 | 206 | 13 | 215 | 2.41e-42 | 142 |
| Msa0567520 | MtrunA17_Chr7g0234201 | 36.139 | 202 | 124 | 2 | 10 | 207 | 14 | 214 | 2.42e-42 | 142 |
| Msa0567520 | MtrunA17_Chr2g0276941 | 39.355 | 155 | 94 | 0 | 10 | 164 | 16 | 170 | 4.63e-42 | 141 |
| Msa0567520 | MtrunA17_Chr8g0335471 | 37.313 | 201 | 115 | 3 | 10 | 206 | 9 | 202 | 5.26e-42 | 140 |
| Msa0567520 | MtrunA17_Chr8g0346421 | 41.401 | 157 | 92 | 0 | 10 | 166 | 27 | 183 | 8.34e-42 | 141 |
| Msa0567520 | MtrunA17_Chr1g0212521 | 37.879 | 198 | 119 | 3 | 11 | 205 | 17 | 213 | 1.03e-41 | 140 |
| Msa0567520 | MtrunA17_Chr1g0174281 | 33.333 | 207 | 127 | 1 | 10 | 205 | 16 | 222 | 1.13e-41 | 140 |
| Msa0567520 | MtrunA17_Chr8g0381841 | 38.961 | 154 | 94 | 0 | 10 | 163 | 18 | 171 | 1.30e-41 | 140 |
| Msa0567520 | MtrunA17_Chr7g0231131 | 34.715 | 193 | 112 | 1 | 10 | 202 | 16 | 194 | 1.93e-41 | 140 |
| Msa0567520 | MtrunA17_Chr4g0030911 | 38.191 | 199 | 117 | 4 | 11 | 205 | 17 | 213 | 2.18e-41 | 139 |
| Msa0567520 | MtrunA17_Chr1g0182321 | 38.071 | 197 | 113 | 3 | 11 | 206 | 17 | 205 | 4.05e-41 | 139 |
| Msa0567520 | MtrunA17_Chr7g0214241 | 34.975 | 203 | 127 | 2 | 10 | 207 | 16 | 218 | 4.93e-41 | 139 |
| Msa0567520 | MtrunA17_Chr6g0482721 | 37.288 | 177 | 109 | 1 | 10 | 186 | 13 | 187 | 6.10e-41 | 138 |
| Msa0567520 | MtrunA17_Chr1g0182301 | 38.071 | 197 | 113 | 3 | 11 | 206 | 17 | 205 | 7.33e-41 | 138 |
| Msa0567520 | MtrunA17_Chr7g0263071 | 43.038 | 158 | 89 | 1 | 11 | 167 | 17 | 174 | 8.16e-41 | 138 |
| Msa0567520 | MtrunA17_Chr7g0275991 | 38.182 | 165 | 98 | 1 | 6 | 166 | 13 | 177 | 2.05e-40 | 137 |
| Msa0567520 | MtrunA17_Chr4g0046261 | 36.306 | 157 | 100 | 0 | 10 | 166 | 14 | 170 | 8.09e-40 | 135 |
| Msa0567520 | MtrunA17_Chr1g0189361 | 38.217 | 157 | 97 | 0 | 10 | 166 | 15 | 171 | 8.42e-40 | 135 |
| Msa0567520 | MtrunA17_Chr2g0315551 | 35.669 | 157 | 101 | 0 | 10 | 166 | 14 | 170 | 1.21e-39 | 135 |
| Msa0567520 | MtrunA17_Chr4g0040781 | 32.124 | 193 | 113 | 1 | 10 | 184 | 14 | 206 | 6.21e-39 | 133 |
| Msa0567520 | MtrunA17_Chr2g0283131 | 36.306 | 157 | 100 | 0 | 10 | 166 | 14 | 170 | 8.31e-39 | 133 |
| Msa0567520 | MtrunA17_Chr2g0327911 | 40.881 | 159 | 92 | 2 | 11 | 167 | 17 | 175 | 1.50e-38 | 132 |
| Msa0567520 | MtrunA17_Chr4g0034871 | 39.024 | 205 | 109 | 6 | 11 | 207 | 10 | 206 | 1.72e-38 | 132 |
| Msa0567520 | MtrunA17_Chr2g0319951 | 34.783 | 161 | 105 | 0 | 10 | 170 | 14 | 174 | 2.51e-38 | 131 |
| Msa0567520 | MtrunA17_Chr2g0325091 | 35.057 | 174 | 113 | 0 | 10 | 183 | 12 | 185 | 4.14e-38 | 131 |
| Msa0567520 | MtrunA17_Chr4g0004661 | 39.216 | 204 | 111 | 4 | 11 | 207 | 66 | 263 | 9.48e-38 | 131 |
| Msa0567520 | MtrunA17_Chr2g0331691 | 38.235 | 204 | 113 | 4 | 11 | 207 | 12 | 209 | 7.93e-37 | 127 |
| Msa0567520 | MtrunA17_Chr1g0180291 | 37.313 | 201 | 116 | 5 | 10 | 205 | 15 | 210 | 1.61e-36 | 127 |
| Msa0567520 | MtrunA17_Chr6g0466301 | 36.538 | 208 | 110 | 6 | 11 | 207 | 10 | 206 | 7.57e-36 | 125 |
| Msa0567520 | MtrunA17_Chr6g0465491 | 36.538 | 208 | 110 | 6 | 11 | 207 | 10 | 206 | 7.57e-36 | 125 |
| Msa0567520 | MtrunA17_Chr1g0201121 | 35.784 | 204 | 118 | 5 | 11 | 207 | 10 | 207 | 7.77e-36 | 125 |
| Msa0567520 | MtrunA17_Chr8g0392931 | 34.375 | 192 | 120 | 2 | 10 | 200 | 15 | 201 | 9.65e-36 | 125 |
| Msa0567520 | MtrunA17_Chr8g0383261 | 33.824 | 204 | 120 | 4 | 11 | 207 | 14 | 209 | 1.12e-35 | 124 |
| Msa0567520 | MtrunA17_Chr8g0384311 | 40.881 | 159 | 91 | 3 | 10 | 166 | 14 | 171 | 1.28e-35 | 124 |
| Msa0567520 | MtrunA17_Chr7g0265001 | 34.483 | 203 | 122 | 4 | 10 | 206 | 17 | 214 | 1.48e-34 | 122 |
| Msa0567520 | MtrunA17_Chr1g0197331 | 37.500 | 200 | 119 | 5 | 10 | 206 | 16 | 212 | 2.65e-34 | 121 |
| Msa0567520 | MtrunA17_Chr3g0130271 | 40.000 | 160 | 92 | 4 | 10 | 166 | 13 | 171 | 1.61e-32 | 116 |
| Msa0567520 | MtrunA17_Chr1g0159481 | 37.736 | 159 | 96 | 3 | 10 | 166 | 18 | 175 | 4.99e-32 | 115 |
| Msa0567520 | MtrunA17_Chr3g0138101 | 32.143 | 168 | 111 | 3 | 10 | 177 | 14 | 178 | 8.30e-24 | 94.4 |
| Msa0567520 | MtrunA17_Chr3g0138121 | 32.143 | 168 | 111 | 3 | 10 | 177 | 14 | 178 | 8.39e-24 | 94.4 |
| Msa0567520 | MtrunA17_Chr3g0138111 | 32.143 | 168 | 111 | 3 | 10 | 177 | 14 | 178 | 8.48e-24 | 94.4 |
| Msa0567520 | MtrunA17_Chr3g0117931 | 36.970 | 165 | 90 | 5 | 11 | 163 | 10 | 172 | 3.44e-23 | 92.4 |
| Msa0567520 | MtrunA17_Chr2g0325101 | 34.545 | 165 | 94 | 5 | 11 | 163 | 8 | 170 | 2.34e-21 | 87.4 |
| Msa0567520 | MtrunA17_Chr6g0486041 | 35.152 | 165 | 93 | 5 | 11 | 163 | 8 | 170 | 4.96e-21 | 86.7 |
| Msa0567520 | MtrunA17_Chr6g0466161 | 28.571 | 189 | 120 | 4 | 26 | 207 | 7 | 187 | 1.14e-20 | 85.9 |
| Msa0567520 | MtrunA17_Chr6g0465471 | 28.042 | 189 | 121 | 4 | 26 | 207 | 7 | 187 | 6.15e-20 | 84.0 |
| Msa0567520 | MtrunA17_Chr4g0037021 | 32.121 | 165 | 98 | 5 | 11 | 163 | 8 | 170 | 1.98e-19 | 82.0 |
| Msa0567520 | MtrunA17_Chr4g0046211 | 36.154 | 130 | 80 | 3 | 11 | 139 | 8 | 135 | 3.21e-19 | 80.5 |
| Msa0567520 | MtrunA17_Chr8g0371501 | 31.515 | 165 | 99 | 5 | 11 | 163 | 8 | 170 | 8.67e-19 | 80.5 |
| Msa0567520 | MtrunA17_Chr5g0405791 | 31.515 | 165 | 99 | 5 | 11 | 163 | 8 | 170 | 9.04e-19 | 80.5 |
| Msa0567520 | MtrunA17_Chr6g0466431 | 38.542 | 96 | 50 | 1 | 11 | 106 | 10 | 96 | 5.34e-18 | 75.9 |
| Msa0567520 | MtrunA17_Chr6g0465611 | 38.542 | 96 | 50 | 1 | 11 | 106 | 10 | 96 | 5.34e-18 | 75.9 |
| Msa0567520 | MtrunA17_Chr5g0443631 | 24.561 | 171 | 123 | 3 | 5 | 170 | 100 | 269 | 2.08e-13 | 67.4 |
| Msa0567520 | MtrunA17_Chr1g0178291 | 32.051 | 156 | 97 | 4 | 12 | 166 | 431 | 578 | 6.54e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0567520 | AT2G22290.1 | 87.923 | 207 | 25 | 0 | 1 | 207 | 1 | 207 | 1.12e-137 | 384 |
| Msa0567520 | AT5G10260.1 | 87.923 | 207 | 25 | 0 | 1 | 207 | 1 | 207 | 1.41e-137 | 383 |
| Msa0567520 | AT2G44610.1 | 85.096 | 208 | 30 | 1 | 1 | 207 | 1 | 208 | 1.19e-131 | 369 |
| Msa0567520 | AT4G39890.1 | 78.505 | 214 | 39 | 3 | 1 | 207 | 1 | 214 | 4.25e-117 | 332 |
| Msa0567520 | AT5G64990.1 | 77.387 | 199 | 44 | 1 | 10 | 207 | 8 | 206 | 1.62e-109 | 312 |
| Msa0567520 | AT5G64990.2 | 74.757 | 206 | 44 | 2 | 10 | 207 | 8 | 213 | 9.51e-107 | 306 |
| Msa0567520 | AT3G54840.1 | 47.561 | 164 | 85 | 1 | 9 | 171 | 33 | 196 | 1.94e-50 | 162 |
| Msa0567520 | AT3G54840.3 | 47.826 | 161 | 83 | 1 | 12 | 171 | 2 | 162 | 1.36e-49 | 159 |
| Msa0567520 | AT4G19640.1 | 40.323 | 186 | 111 | 0 | 11 | 196 | 12 | 197 | 2.76e-49 | 159 |
| Msa0567520 | AT5G45130.1 | 44.099 | 161 | 90 | 0 | 11 | 171 | 12 | 172 | 3.95e-49 | 159 |
| Msa0567520 | AT3G54840.2 | 48.077 | 156 | 80 | 1 | 9 | 163 | 33 | 188 | 2.78e-48 | 157 |
| Msa0567520 | AT5G45130.2 | 41.477 | 176 | 101 | 1 | 13 | 188 | 22 | 195 | 3.97e-47 | 154 |
| Msa0567520 | AT3G11730.1 | 39.000 | 200 | 112 | 3 | 10 | 205 | 9 | 202 | 2.11e-44 | 147 |
| Msa0567520 | AT4G17170.1 | 34.483 | 203 | 126 | 2 | 10 | 205 | 7 | 209 | 2.53e-44 | 147 |
| Msa0567520 | AT4G17160.1 | 34.146 | 205 | 121 | 2 | 9 | 205 | 6 | 204 | 8.34e-44 | 145 |
| Msa0567520 | AT1G09630.1 | 40.252 | 159 | 95 | 0 | 10 | 168 | 13 | 171 | 9.56e-44 | 145 |
| Msa0567520 | AT1G07410.1 | 39.752 | 161 | 97 | 0 | 10 | 170 | 13 | 173 | 1.40e-43 | 145 |
| Msa0567520 | AT1G05810.1 | 36.634 | 202 | 124 | 2 | 10 | 207 | 13 | 214 | 2.21e-43 | 145 |
| Msa0567520 | AT2G31680.1 | 36.946 | 203 | 123 | 2 | 10 | 207 | 13 | 215 | 5.77e-43 | 144 |
| Msa0567520 | AT1G05810.2 | 36.634 | 202 | 124 | 2 | 10 | 207 | 59 | 260 | 6.69e-43 | 145 |
| Msa0567520 | AT4G35860.1 | 34.975 | 203 | 125 | 3 | 10 | 205 | 7 | 209 | 7.74e-43 | 143 |
| Msa0567520 | AT5G59150.1 | 39.490 | 157 | 95 | 0 | 10 | 166 | 13 | 169 | 1.99e-42 | 142 |
| Msa0567520 | AT5G65270.1 | 37.580 | 157 | 98 | 0 | 10 | 166 | 18 | 174 | 2.13e-42 | 142 |
| Msa0567520 | AT1G02130.1 | 37.000 | 200 | 117 | 3 | 10 | 206 | 9 | 202 | 3.06e-42 | 141 |
| Msa0567520 | AT3G46830.1 | 38.854 | 157 | 96 | 0 | 10 | 166 | 13 | 169 | 4.44e-42 | 141 |
| Msa0567520 | AT3G46830.2 | 38.854 | 157 | 96 | 0 | 10 | 166 | 13 | 169 | 4.44e-42 | 141 |
| Msa0567520 | AT3G12160.1 | 37.438 | 203 | 120 | 3 | 10 | 205 | 16 | 218 | 1.50e-41 | 140 |
| Msa0567520 | AT4G17530.1 | 36.683 | 199 | 118 | 2 | 10 | 206 | 9 | 201 | 1.73e-41 | 139 |
| Msa0567520 | AT5G47520.1 | 35.437 | 206 | 124 | 4 | 10 | 206 | 15 | 220 | 1.87e-41 | 140 |
| Msa0567520 | AT4G39990.1 | 36.025 | 161 | 103 | 0 | 10 | 170 | 18 | 178 | 1.99e-41 | 140 |
| Msa0567520 | AT3G07410.1 | 42.208 | 154 | 89 | 0 | 10 | 163 | 13 | 166 | 2.22e-41 | 140 |
| Msa0567520 | AT2G43130.1 | 35.500 | 200 | 124 | 2 | 10 | 205 | 13 | 211 | 2.32e-41 | 139 |
| Msa0567520 | AT5G47960.1 | 34.804 | 204 | 125 | 2 | 10 | 205 | 16 | 219 | 3.22e-41 | 139 |
| Msa0567520 | AT3G53610.2 | 38.579 | 197 | 112 | 3 | 11 | 206 | 17 | 205 | 3.25e-41 | 139 |
| Msa0567520 | AT3G53610.3 | 38.579 | 197 | 112 | 3 | 11 | 206 | 17 | 205 | 3.25e-41 | 139 |
| Msa0567520 | AT3G53610.1 | 38.579 | 197 | 112 | 3 | 11 | 206 | 17 | 205 | 3.25e-41 | 139 |
| Msa0567520 | AT5G47200.1 | 36.683 | 199 | 118 | 2 | 10 | 206 | 9 | 201 | 3.86e-41 | 139 |
| Msa0567520 | AT5G59840.1 | 39.286 | 196 | 109 | 4 | 11 | 204 | 17 | 204 | 4.17e-41 | 139 |
| Msa0567520 | AT3G46060.2 | 39.487 | 195 | 108 | 4 | 11 | 203 | 17 | 203 | 5.53e-41 | 139 |
| Msa0567520 | AT3G46060.3 | 39.487 | 195 | 108 | 4 | 11 | 203 | 17 | 203 | 5.53e-41 | 139 |
| Msa0567520 | AT3G46060.1 | 39.487 | 195 | 108 | 4 | 11 | 203 | 17 | 203 | 5.53e-41 | 139 |
| Msa0567520 | AT1G18200.1 | 40.909 | 154 | 91 | 0 | 10 | 163 | 14 | 167 | 8.24e-41 | 139 |
| Msa0567520 | AT5G03520.1 | 39.394 | 198 | 118 | 2 | 11 | 206 | 17 | 214 | 9.69e-41 | 138 |
| Msa0567520 | AT3G15060.1 | 36.646 | 161 | 102 | 0 | 10 | 170 | 14 | 174 | 2.41e-40 | 137 |
| Msa0567520 | AT5G60860.1 | 33.161 | 193 | 111 | 1 | 10 | 184 | 14 | 206 | 6.80e-40 | 136 |
| Msa0567520 | AT4G18430.1 | 33.163 | 196 | 113 | 1 | 10 | 187 | 14 | 209 | 9.71e-40 | 135 |
| Msa0567520 | AT1G73640.1 | 38.961 | 154 | 94 | 0 | 10 | 163 | 14 | 167 | 2.04e-39 | 135 |
| Msa0567520 | AT3G18820.1 | 39.512 | 205 | 108 | 6 | 11 | 207 | 10 | 206 | 6.56e-39 | 133 |
| Msa0567520 | AT1G28550.1 | 37.580 | 157 | 98 | 0 | 10 | 166 | 14 | 170 | 7.03e-39 | 133 |
| Msa0567520 | AT1G16920.1 | 35.032 | 157 | 102 | 0 | 10 | 166 | 14 | 170 | 1.04e-38 | 133 |
| Msa0567520 | AT4G19640.2 | 44.444 | 126 | 70 | 0 | 11 | 136 | 12 | 137 | 2.82e-38 | 129 |
| Msa0567520 | AT3G09900.1 | 39.409 | 203 | 113 | 3 | 11 | 206 | 17 | 216 | 4.63e-38 | 131 |
| Msa0567520 | AT1G52280.1 | 39.216 | 204 | 110 | 4 | 11 | 207 | 10 | 206 | 4.67e-38 | 131 |
| Msa0567520 | AT1G01200.1 | 35.714 | 210 | 122 | 5 | 10 | 207 | 29 | 237 | 5.31e-38 | 132 |
| Msa0567520 | AT5G45750.1 | 31.579 | 209 | 124 | 5 | 10 | 206 | 14 | 215 | 1.16e-37 | 130 |
| Msa0567520 | AT1G06400.1 | 36.306 | 157 | 100 | 0 | 10 | 166 | 14 | 170 | 1.35e-37 | 130 |
| Msa0567520 | AT4G19640.3 | 43.066 | 137 | 74 | 1 | 11 | 147 | 12 | 144 | 1.63e-37 | 129 |
| Msa0567520 | AT2G33870.1 | 36.306 | 157 | 100 | 0 | 10 | 166 | 14 | 170 | 6.84e-37 | 128 |
| Msa0567520 | AT3G16100.1 | 39.216 | 204 | 110 | 4 | 11 | 207 | 10 | 206 | 2.08e-36 | 127 |
| Msa0567520 | AT4G18800.1 | 34.591 | 159 | 100 | 2 | 10 | 166 | 14 | 170 | 6.15e-36 | 125 |
| Msa0567520 | AT2G21880.1 | 36.967 | 211 | 110 | 6 | 11 | 207 | 11 | 212 | 7.16e-36 | 125 |
| Msa0567520 | AT4G09720.1 | 36.765 | 204 | 115 | 6 | 11 | 207 | 10 | 206 | 2.66e-35 | 124 |
| Msa0567520 | AT1G22740.1 | 35.784 | 204 | 114 | 6 | 11 | 207 | 10 | 203 | 5.75e-35 | 123 |
| Msa0567520 | AT1G49300.2 | 37.561 | 205 | 112 | 6 | 11 | 207 | 10 | 206 | 6.79e-35 | 123 |
| Msa0567520 | AT1G49300.1 | 37.561 | 205 | 112 | 6 | 11 | 207 | 10 | 206 | 6.79e-35 | 123 |
| Msa0567520 | AT5G03530.2 | 36.453 | 203 | 117 | 7 | 10 | 206 | 14 | 210 | 9.54e-34 | 120 |
| Msa0567520 | AT5G03530.1 | 36.453 | 203 | 117 | 7 | 10 | 206 | 14 | 210 | 9.54e-34 | 120 |
| Msa0567520 | AT1G43890.3 | 38.953 | 172 | 100 | 4 | 10 | 179 | 14 | 182 | 1.45e-33 | 119 |
| Msa0567520 | AT1G43890.1 | 38.953 | 172 | 100 | 4 | 10 | 179 | 14 | 182 | 1.45e-33 | 119 |
| Msa0567520 | AT1G43890.2 | 38.953 | 172 | 100 | 4 | 10 | 179 | 14 | 182 | 1.45e-33 | 119 |
| Msa0567520 | AT4G09720.4 | 34.450 | 209 | 118 | 5 | 11 | 207 | 10 | 211 | 2.57e-33 | 119 |
| Msa0567520 | AT5G03520.2 | 38.182 | 165 | 100 | 2 | 44 | 206 | 40 | 204 | 6.69e-33 | 117 |
| Msa0567520 | AT4G09720.3 | 34.419 | 215 | 116 | 6 | 11 | 207 | 10 | 217 | 9.87e-33 | 117 |
| Msa0567520 | AT4G35860.2 | 35.802 | 162 | 93 | 3 | 53 | 205 | 4 | 163 | 3.00e-32 | 115 |
| Msa0567520 | AT5G39620.1 | 34.783 | 207 | 120 | 5 | 9 | 207 | 5 | 204 | 2.12e-31 | 114 |
| Msa0567520 | AT3G09910.3 | 37.688 | 199 | 114 | 6 | 10 | 206 | 14 | 204 | 6.70e-31 | 112 |
| Msa0567520 | AT3G09910.1 | 37.688 | 199 | 114 | 6 | 10 | 206 | 14 | 204 | 6.70e-31 | 112 |
| Msa0567520 | AT3G09910.2 | 37.688 | 199 | 114 | 6 | 10 | 206 | 14 | 204 | 6.70e-31 | 112 |
| Msa0567520 | AT3G09910.5 | 39.375 | 160 | 94 | 3 | 10 | 167 | 14 | 172 | 5.14e-30 | 110 |
| Msa0567520 | AT3G09910.4 | 39.375 | 160 | 94 | 3 | 10 | 167 | 14 | 172 | 5.14e-30 | 110 |
| Msa0567520 | AT2G21880.4 | 35.204 | 196 | 104 | 6 | 26 | 207 | 1 | 187 | 7.39e-29 | 107 |
| Msa0567520 | AT2G21880.3 | 35.204 | 196 | 104 | 6 | 26 | 207 | 1 | 187 | 7.39e-29 | 107 |
| Msa0567520 | AT5G59150.2 | 39.474 | 114 | 69 | 0 | 53 | 166 | 5 | 118 | 7.16e-28 | 103 |
| Msa0567520 | AT2G21880.2 | 33.649 | 211 | 109 | 7 | 11 | 207 | 11 | 204 | 2.27e-26 | 100 |
| Msa0567520 | AT4G09720.6 | 36.158 | 177 | 99 | 6 | 38 | 207 | 3 | 172 | 3.16e-26 | 99.8 |
| Msa0567520 | AT4G09720.5 | 36.158 | 177 | 99 | 6 | 38 | 207 | 3 | 172 | 3.16e-26 | 99.8 |
| Msa0567520 | AT4G09720.2 | 36.158 | 177 | 99 | 6 | 38 | 207 | 3 | 172 | 3.16e-26 | 99.8 |
| Msa0567520 | AT5G55080.1 | 30.409 | 171 | 116 | 3 | 7 | 177 | 11 | 178 | 6.54e-25 | 97.4 |
| Msa0567520 | AT5G20010.1 | 30.729 | 192 | 126 | 4 | 10 | 201 | 14 | 198 | 1.06e-24 | 97.1 |
| Msa0567520 | AT5G20020.1 | 30.729 | 192 | 126 | 4 | 10 | 201 | 14 | 198 | 1.62e-24 | 96.7 |
| Msa0567520 | AT5G55190.1 | 32.143 | 168 | 111 | 3 | 10 | 177 | 14 | 178 | 1.33e-23 | 94.0 |
| Msa0567520 | AT2G44690.1 | 35.758 | 165 | 92 | 5 | 11 | 163 | 20 | 182 | 2.06e-23 | 93.2 |
| Msa0567520 | AT3G48040.1 | 36.970 | 165 | 90 | 5 | 11 | 163 | 10 | 172 | 2.01e-22 | 90.9 |
| Msa0567520 | AT5G62880.1 | 35.758 | 165 | 92 | 5 | 11 | 163 | 10 | 172 | 3.45e-21 | 87.8 |
| Msa0567520 | AT4G35020.1 | 33.939 | 165 | 95 | 5 | 11 | 163 | 8 | 170 | 3.60e-21 | 87.0 |
| Msa0567520 | AT4G35020.2 | 33.939 | 165 | 95 | 5 | 11 | 163 | 8 | 170 | 3.60e-21 | 87.0 |
| Msa0567520 | AT4G35020.3 | 33.939 | 165 | 95 | 5 | 11 | 163 | 8 | 170 | 3.60e-21 | 87.0 |
| Msa0567520 | AT3G48040.2 | 37.179 | 156 | 84 | 5 | 11 | 154 | 10 | 163 | 1.81e-20 | 84.7 |
| Msa0567520 | AT3G51300.1 | 33.333 | 165 | 96 | 5 | 11 | 163 | 8 | 170 | 4.49e-20 | 84.3 |
| Msa0567520 | AT1G20090.1 | 33.333 | 165 | 96 | 5 | 11 | 163 | 7 | 169 | 5.04e-20 | 84.0 |
| Msa0567520 | AT1G75840.1 | 33.333 | 165 | 96 | 5 | 11 | 163 | 8 | 170 | 5.20e-20 | 84.0 |
| Msa0567520 | AT4G35950.1 | 33.333 | 165 | 96 | 5 | 11 | 163 | 8 | 170 | 1.97e-19 | 82.4 |
| Msa0567520 | AT4G28950.1 | 33.129 | 163 | 97 | 5 | 11 | 163 | 8 | 168 | 2.57e-19 | 82.4 |
| Msa0567520 | AT2G17800.2 | 33.333 | 165 | 96 | 5 | 11 | 163 | 8 | 170 | 2.62e-19 | 82.4 |
| Msa0567520 | AT2G17800.1 | 33.333 | 165 | 96 | 5 | 11 | 163 | 8 | 170 | 2.62e-19 | 82.4 |
| Msa0567520 | AT5G62880.2 | 35.897 | 156 | 86 | 5 | 11 | 154 | 10 | 163 | 3.20e-19 | 82.0 |
| Msa0567520 | AT5G45970.1 | 31.515 | 165 | 99 | 5 | 11 | 163 | 8 | 170 | 9.98e-19 | 80.9 |
| Msa0567520 | AT4G35020.4 | 35.965 | 114 | 70 | 3 | 11 | 123 | 8 | 119 | 2.68e-15 | 70.5 |
| Msa0567520 | AT4G35020.5 | 35.965 | 114 | 70 | 3 | 11 | 123 | 8 | 119 | 2.68e-15 | 70.5 |
| Msa0567520 | AT5G46025.1 | 36.782 | 87 | 54 | 1 | 85 | 170 | 20 | 106 | 2.69e-14 | 67.0 |
| Msa0567520 | AT3G51290.2 | 32.576 | 132 | 76 | 4 | 44 | 163 | 641 | 771 | 5.44e-12 | 64.7 |
| Msa0567520 | AT3G21700.3 | 23.256 | 172 | 125 | 3 | 5 | 170 | 102 | 272 | 3.63e-11 | 61.6 |
| Msa0567520 | AT5G54840.1 | 24.699 | 166 | 117 | 5 | 11 | 170 | 103 | 266 | 4.43e-11 | 61.2 |
Find 64 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGAAAACGAGCTTGTATT+TGG | 0.223259 | 4_1:+68839536 | None:intergenic |
| AACCCTTTCTTCTACAAATA+AGG | 0.224029 | 4_1:-68837452 | Msa0567520:CDS |
| TGAGACTTCTAAATCTTTCT+TGG | 0.265565 | 4_1:+68838542 | None:intergenic |
| CGATCCATTTCTCTCATAAA+TGG | 0.286173 | 4_1:-68839577 | Msa0567520:exon |
| TCAATGATCCTTGAGTTAAT+TGG | 0.293170 | 4_1:-68837245 | Msa0567520:three_prime_UTR |
| AGTCGAAAATGGCGTGTATT+TGG | 0.316103 | 4_1:-68839727 | None:intergenic |
| GAACTGTTCGTTTGCAGCTT+TGG | 0.333518 | 4_1:-68838735 | Msa0567520:intron |
| CAAATTTGACACCACCTATC+AGG | 0.340690 | 4_1:-68839463 | Msa0567520:intron |
| GATGCCAAATCAAAAGAGTT+TGG | 0.348088 | 4_1:-68837829 | Msa0567520:CDS |
| TCCTCCCTGCTGCTCTGTAT+TGG | 0.354070 | 4_1:+68837387 | None:intergenic |
| TATTATTGTATTCTTACATC+CGG | 0.383371 | 4_1:+68837139 | None:intergenic |
| CTTCCTTATTTGTAGAAGAA+AGG | 0.383495 | 4_1:+68837449 | None:intergenic |
| GAGGAGGTTGCTCATGTTAG+AGG | 0.391358 | 4_1:-68837369 | Msa0567520:exon |
| AAGATTGCTTCCGCCTTGCC+AGG | 0.393556 | 4_1:-68837481 | Msa0567520:CDS |
| AACGAACAGTTCTATCTTCA+AGG | 0.399142 | 4_1:+68838746 | None:intergenic |
| CATGAAGCGGGTGATGATAC+TGG | 0.410880 | 4_1:+68839491 | None:intergenic |
| GAAGAAAGGGTTTCCATCCC+TGG | 0.417515 | 4_1:+68837463 | None:intergenic |
| TTCCTTATTTGTAGAAGAAA+GGG | 0.422408 | 4_1:+68837450 | None:intergenic |
| GAAGAATCTCTTATGTAGCT+TGG | 0.431932 | 4_1:+68838517 | None:intergenic |
| TGTGGGACAAATTGCGGTAA+TGG | 0.433044 | 4_1:-68837220 | Msa0567520:three_prime_UTR |
| TGCTTCCGCCTTGCCAGGGA+TGG | 0.448090 | 4_1:-68837476 | Msa0567520:CDS |
| TTCATCCAATACAGAGCAGC+AGG | 0.451660 | 4_1:-68837392 | Msa0567520:CDS |
| GTCGCCATTTATGAGAGAAA+TGG | 0.453134 | 4_1:+68839573 | None:intergenic |
| TCTTAAATGTAAAGTAAAGC+TGG | 0.469282 | 4_1:-68837286 | Msa0567520:three_prime_UTR |
| AAACTGATCTTGTCGAGAAA+AGG | 0.473751 | 4_1:-68838196 | Msa0567520:intron |
| ATTATTGTATTCTTACATCC+GGG | 0.476541 | 4_1:+68837140 | None:intergenic |
| TTCTTAGGCGATCAATCCGT+TGG | 0.478079 | 4_1:-68839519 | Msa0567520:CDS |
| AGGCAAGTTTCTATAGAAGA+AGG | 0.486341 | 4_1:-68837853 | Msa0567520:CDS |
| GATGTTATAATTGTCTTGGT+TGG | 0.487954 | 4_1:-68838224 | Msa0567520:CDS |
| TAGTGATGTTATAATTGTCT+TGG | 0.496039 | 4_1:-68838228 | Msa0567520:CDS |
| ATCGAAACCAGTGCAAAAGC+AGG | 0.513342 | 4_1:-68837796 | Msa0567520:CDS |
| AATGAAGAATTGAACCTGAT+AGG | 0.522083 | 4_1:+68839449 | None:intergenic |
| AATACAGAGCAGCAGGGAGG+AGG | 0.528419 | 4_1:-68837385 | Msa0567520:CDS |
| TTAACTTTCAGGGATACTGC+AGG | 0.536162 | 4_1:-68838565 | Msa0567520:intron |
| ATATAATTTCAGGCTACTAT+CGG | 0.539656 | 4_1:-68838796 | Msa0567520:intron |
| GTATTGGATGAATGCACTGT+GGG | 0.541454 | 4_1:+68837403 | None:intergenic |
| AAATTTGTCGTACATGAAGC+GGG | 0.551096 | 4_1:+68839479 | None:intergenic |
| AAAAGCAGGCTTCAATATCA+AGG | 0.552081 | 4_1:-68837782 | Msa0567520:intron |
| CACTAACAAGTGGGTTGAGG+AGG | 0.553351 | 4_1:-68838267 | Msa0567520:CDS |
| GAACACTAACAAGTGGGTTG+AGG | 0.553502 | 4_1:-68838270 | Msa0567520:CDS |
| TTCTACAAATAAGGAAGACA+TGG | 0.563578 | 4_1:-68837443 | Msa0567520:CDS |
| AGATTGCTTCCGCCTTGCCA+GGG | 0.573903 | 4_1:-68837480 | Msa0567520:CDS |
| TTTGTTATACAATTAGTCCC+CGG | 0.575062 | 4_1:-68837158 | Msa0567520:three_prime_UTR |
| CAAATTTGTCGTACATGAAG+CGG | 0.575167 | 4_1:+68839478 | None:intergenic |
| CATTTATGAGAGAAATGGAT+CGG | 0.579731 | 4_1:+68839578 | None:intergenic |
| CCTTGAGTTAATTGGTGTGT+GGG | 0.588838 | 4_1:-68837237 | Msa0567520:three_prime_UTR |
| AAGGGTTTCCATCCCTGGCA+AGG | 0.588850 | 4_1:+68837468 | None:intergenic |
| CATTTCTGAACACTAACAAG+TGG | 0.594464 | 4_1:-68838277 | Msa0567520:CDS |
| ATTTCTCTCATAAATGGCGA+CGG | 0.612804 | 4_1:-68839571 | Msa0567520:exon |
| ATTTCTGAACACTAACAAGT+GGG | 0.616106 | 4_1:-68838276 | Msa0567520:CDS |
| TCCTTGAGTTAATTGGTGTG+TGG | 0.623166 | 4_1:-68837238 | Msa0567520:three_prime_UTR |
| GAAGCAATCTTACGAAACAA+AGG | 0.623923 | 4_1:+68837493 | None:intergenic |
| ACGAGCTTGTATTTGGCGAG+AGG | 0.624355 | 4_1:+68839543 | None:intergenic |
| TTATTGTATTCTTACATCCG+GGG | 0.636847 | 4_1:+68837141 | None:intergenic |
| CCCACACACCAATTAACTCA+AGG | 0.638626 | 4_1:+68837237 | None:intergenic |
| TTTCACTTGAGTATAATACT+GGG | 0.651284 | 4_1:-68837316 | Msa0567520:three_prime_UTR |
| TAAATGTAAAGTAAAGCTGG+AGG | 0.654451 | 4_1:-68837283 | Msa0567520:three_prime_UTR |
| GAGGAGGTGCGTCAAGAACG+TGG | 0.657614 | 4_1:-68838251 | Msa0567520:CDS |
| TGTATTGGATGAATGCACTG+TGG | 0.660739 | 4_1:+68837402 | None:intergenic |
| TTGGTGTGTGGGACAAATTG+CGG | 0.687470 | 4_1:-68837226 | Msa0567520:three_prime_UTR |
| TCCAATACAGAGCAGCAGGG+AGG | 0.703010 | 4_1:-68837388 | Msa0567520:CDS |
| GGTTTCCATCCCTGGCAAGG+CGG | 0.703532 | 4_1:+68837471 | None:intergenic |
| GAAGAATTGAACCTGATAGG+TGG | 0.713334 | 4_1:+68839452 | None:intergenic |
| TCATCCAATACAGAGCAGCA+GGG | 0.714266 | 4_1:-68837391 | Msa0567520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAACAAATGAAAAAATAA+CGG | + | chr4_1:68839673-68839692 | None:intergenic | 10.0% |
| !! | CTCATAAAATTAAAATCATA+GGG | + | chr4_1:68837535-68837554 | None:intergenic | 15.0% |
| !! | TCTCATAAAATTAAAATCAT+AGG | + | chr4_1:68837536-68837555 | None:intergenic | 15.0% |
| !!! | TGATTTTAATTTTATGAGAT+TGG | - | chr4_1:68837537-68837556 | Msa0567520:intron | 15.0% |
| !! | CTTAAAAATGTGATTTATAA+GGG | + | chr4_1:68837647-68837666 | None:intergenic | 15.0% |
| !!! | ACAATGAATTTTAAAAAAAC+TGG | + | chr4_1:68837699-68837718 | None:intergenic | 15.0% |
| !! | AAATTTGATCATATAATTTC+AGG | - | chr4_1:68838036-68838055 | Msa0567520:intron | 15.0% |
| !! | AAAAAAAATATAAATTGACG+AGG | + | chr4_1:68838144-68838163 | None:intergenic | 15.0% |
| !! | TATCGTTATTTAACTAAAAA+AGG | + | chr4_1:68838493-68838512 | None:intergenic | 15.0% |
| !!! | GTTTTTGTTTAATATCATAT+TGG | - | chr4_1:68838738-68838757 | Msa0567520:CDS | 15.0% |
| !! | GTTAATGAAATTAATTGAAT+TGG | + | chr4_1:68838899-68838918 | None:intergenic | 15.0% |
| !! | TCAATTAATTTCATTAACAA+AGG | - | chr4_1:68838901-68838920 | Msa0567520:intron | 15.0% |
| !!! | TGGTCTAATTATTTTTTTTA+TGG | - | chr4_1:68838953-68838972 | Msa0567520:intron | 15.0% |
| !!! | GAATATCTGAAAAATTTGTT+AGG | + | chr4_1:68837184-68837203 | None:intergenic | 20.0% |
| !! | CCTTAAAAATGTGATTTATA+AGG | + | chr4_1:68837648-68837667 | None:intergenic | 20.0% |
| !!! | CCTTATAAATCACATTTTTA+AGG | - | chr4_1:68837645-68837664 | Msa0567520:intron | 20.0% |
| !!! | AATTCTGATGATTTTTTTAG+AGG | - | chr4_1:68837839-68837858 | Msa0567520:CDS | 20.0% |
| !!! | GCTTTTATGTTAGAATATTA+TGG | - | chr4_1:68837861-68837880 | Msa0567520:intron | 20.0% |
| !! | TTCCAACATCATATAATAAA+TGG | - | chr4_1:68837942-68837961 | Msa0567520:intron | 20.0% |
| !! | TCAGAAATAGTAAAAAGAAA+AGG | + | chr4_1:68838245-68838264 | None:intergenic | 20.0% |
| !!! | TTAGTGTATTTTAACTTTCA+GGG | - | chr4_1:68838267-68838286 | Msa0567520:CDS | 20.0% |
| !! | CTTACTTAGGTTAATAATAT+AGG | + | chr4_1:68838522-68838541 | None:intergenic | 20.0% |
| !! | ATGAATATATAGATCAAACT+CGG | + | chr4_1:68838686-68838705 | None:intergenic | 20.0% |
| !! | AATTAATTGAATTGGCTATA+AGG | + | chr4_1:68838891-68838910 | None:intergenic | 20.0% |
| !! | TATTCGATGTAAAACAAAAT+AGG | + | chr4_1:68839236-68839255 | None:intergenic | 20.0% |
| !! | TATTATTGTATTCTTACATC+CGG | + | chr4_1:68839706-68839725 | None:intergenic | 20.0% |
| !! | TTCTCAATTTCAATTTTGCA+TGG | - | chr4_1:68837422-68837441 | Msa0567520:CDS | 25.0% |
| ! | AGATTGATCATTCAAGAATT+AGG | - | chr4_1:68837720-68837739 | Msa0567520:intron | 25.0% |
| ! | CTCCATTTATTATATGATGT+TGG | + | chr4_1:68837947-68837966 | None:intergenic | 25.0% |
| ! | CAACATCATATAATAAATGG+AGG | - | chr4_1:68837945-68837964 | Msa0567520:intron | 25.0% |
| ! | ATATAATTTCAGGCTACTAT+CGG | - | chr4_1:68838046-68838065 | Msa0567520:intron | 25.0% |
| ! | AGATGATGCATTATGATTTA+TGG | - | chr4_1:68838187-68838206 | Msa0567520:intron | 25.0% |
| ! | TGAAACAAAAAAATCCTACA+CGG | + | chr4_1:68838222-68838241 | None:intergenic | 25.0% |
| !!! | CTTAGTGTATTTTAACTTTC+AGG | - | chr4_1:68838266-68838285 | Msa0567520:CDS | 25.0% |
| ! | TAGTGATGTTATAATTGTCT+TGG | - | chr4_1:68838614-68838633 | Msa0567520:intron | 25.0% |
| ! | TCTATATATTCATTCACAAC+CGG | - | chr4_1:68838693-68838712 | Msa0567520:intron | 25.0% |
| ! | TAGCAAAATTACAAAGAACA+TGG | + | chr4_1:68838839-68838858 | None:intergenic | 25.0% |
| !!! | CTTTGTAATTTTGCTATGAT+AGG | - | chr4_1:68838843-68838862 | Msa0567520:intron | 25.0% |
| ! | TTTCAAATATTGCGATGTTA+TGG | - | chr4_1:68838933-68838952 | Msa0567520:intron | 25.0% |
| !! | AATGAATTTTCATAGTTGCT+TGG | - | chr4_1:68839091-68839110 | Msa0567520:intron | 25.0% |
| !! | ATGAATTTTCATAGTTGCTT+GGG | - | chr4_1:68839092-68839111 | Msa0567520:intron | 25.0% |
| ! | TTAGATGTGAAAGTTAGTAA+AGG | + | chr4_1:68839204-68839223 | None:intergenic | 25.0% |
| !! | TTCCTTATTTGTAGAAGAAA+GGG | + | chr4_1:68839395-68839414 | None:intergenic | 25.0% |
| !! | TTTTCACTTGAGTATAATAC+TGG | - | chr4_1:68839525-68839544 | Msa0567520:CDS | 25.0% |
| ! | TTTCACTTGAGTATAATACT+GGG | - | chr4_1:68839526-68839545 | Msa0567520:CDS | 25.0% |
| ! | TCTTAAATGTAAAGTAAAGC+TGG | - | chr4_1:68839556-68839575 | Msa0567520:CDS | 25.0% |
| ! | ATTATTGTATTCTTACATCC+GGG | + | chr4_1:68839705-68839724 | None:intergenic | 25.0% |
| CATTTATGAGAGAAATGGAT+CGG | + | chr4_1:68837267-68837286 | None:intergenic | 30.0% | |
| TAAGAAAACGAGCTTGTATT+TGG | + | chr4_1:68837309-68837328 | None:intergenic | 30.0% | |
| ! | AAATACAAGCTCGTTTTCTT+AGG | - | chr4_1:68837308-68837327 | Msa0567520:three_prime_UTR | 30.0% |
| AATGAAGAATTGAACCTGAT+AGG | + | chr4_1:68837396-68837415 | None:intergenic | 30.0% | |
| !! | TGATCACAAGTTGATGAATT+AGG | - | chr4_1:68837584-68837603 | Msa0567520:intron | 30.0% |
| !! | AAGTTGATGAATTAGGACTT+TGG | - | chr4_1:68837591-68837610 | Msa0567520:intron | 30.0% |
| ! | TCATTCATAAGTCACTTTCA+AGG | - | chr4_1:68837803-68837822 | Msa0567520:CDS | 30.0% |
| TGAGACTTCTAAATCTTTCT+TGG | + | chr4_1:68838303-68838322 | None:intergenic | 30.0% | |
| TATGTGTTTGCATTTGAATC+TGG | - | chr4_1:68838442-68838461 | Msa0567520:intron | 30.0% | |
| ATGTGTTTGCATTTGAATCT+GGG | - | chr4_1:68838443-68838462 | Msa0567520:intron | 30.0% | |
| TACATTAGAACAGCTTACTT+AGG | + | chr4_1:68838535-68838554 | None:intergenic | 30.0% | |
| ATTTCTGAACACTAACAAGT+GGG | - | chr4_1:68838566-68838585 | Msa0567520:intron | 30.0% | |
| GATGTTATAATTGTCTTGGT+TGG | - | chr4_1:68838618-68838637 | Msa0567520:intron | 30.0% | |
| !! | GATTCCAAACTCTTTTGATT+TGG | + | chr4_1:68839020-68839039 | None:intergenic | 30.0% |
| TGTGAAAGTTAGTAAAGGTA+AGG | + | chr4_1:68839199-68839218 | None:intergenic | 30.0% | |
| AACCCTTTCTTCTACAAATA+AGG | - | chr4_1:68839390-68839409 | Msa0567520:intron | 30.0% | |
| ! | CTTCCTTATTTGTAGAAGAA+AGG | + | chr4_1:68839396-68839415 | None:intergenic | 30.0% |
| TTCTACAAATAAGGAAGACA+TGG | - | chr4_1:68839399-68839418 | Msa0567520:intron | 30.0% | |
| TAAATGTAAAGTAAAGCTGG+AGG | - | chr4_1:68839559-68839578 | Msa0567520:CDS | 30.0% | |
| TCAATGATCCTTGAGTTAAT+TGG | - | chr4_1:68839597-68839616 | Msa0567520:five_prime_UTR | 30.0% | |
| ! | TTTGTTATACAATTAGTCCC+CGG | - | chr4_1:68839684-68839703 | Msa0567520:five_prime_UTR | 30.0% |
| TTATTGTATTCTTACATCCG+GGG | + | chr4_1:68839704-68839723 | None:intergenic | 30.0% | |
| CGATCCATTTCTCTCATAAA+TGG | - | chr4_1:68837265-68837284 | Msa0567520:three_prime_UTR | 35.0% | |
| ATTTCTCTCATAAATGGCGA+CGG | - | chr4_1:68837271-68837290 | Msa0567520:three_prime_UTR | 35.0% | |
| AAATTTGTCGTACATGAAGC+GGG | + | chr4_1:68837366-68837385 | None:intergenic | 35.0% | |
| CAAATTTGTCGTACATGAAG+CGG | + | chr4_1:68837367-68837386 | None:intergenic | 35.0% | |
| AATTAGGACTTTGGACGATT+AGG | - | chr4_1:68837600-68837619 | Msa0567520:intron | 35.0% | |
| GGTTTCAACGACTCAAATTA+TGG | + | chr4_1:68837748-68837767 | None:intergenic | 35.0% | |
| TTAGCAATCTAGCAACATAG+GGG | + | chr4_1:68838012-68838031 | None:intergenic | 35.0% | |
| GTTAGCAATCTAGCAACATA+GGG | + | chr4_1:68838013-68838032 | None:intergenic | 35.0% | |
| TGTTAGCAATCTAGCAACAT+AGG | + | chr4_1:68838014-68838033 | None:intergenic | 35.0% | |
| AACGAACAGTTCTATCTTCA+AGG | + | chr4_1:68838099-68838118 | None:intergenic | 35.0% | |
| GAAGAATCTCTTATGTAGCT+TGG | + | chr4_1:68838328-68838347 | None:intergenic | 35.0% | |
| TAAGCTGTTCTAATGTAGAC+AGG | - | chr4_1:68838538-68838557 | Msa0567520:CDS | 35.0% | |
| CATTTCTGAACACTAACAAG+TGG | - | chr4_1:68838565-68838584 | Msa0567520:intron | 35.0% | |
| AAACTGATCTTGTCGAGAAA+AGG | - | chr4_1:68838646-68838665 | Msa0567520:intron | 35.0% | |
| AAACTTGCCTGTAAACAAAG+CGG | + | chr4_1:68838979-68838998 | None:intergenic | 35.0% | |
| AGGCAAGTTTCTATAGAAGA+AGG | - | chr4_1:68838989-68839008 | Msa0567520:intron | 35.0% | |
| GATGCCAAATCAAAAGAGTT+TGG | - | chr4_1:68839013-68839032 | Msa0567520:intron | 35.0% | |
| AAAAGCAGGCTTCAATATCA+AGG | - | chr4_1:68839060-68839079 | Msa0567520:intron | 35.0% | |
| GTTTATCTTCTTTCCCATGT+TGG | - | chr4_1:68839285-68839304 | Msa0567520:intron | 35.0% | |
| ! | TGCATTGACAGATAACAATG+AGG | + | chr4_1:68839320-68839339 | None:intergenic | 35.0% |
| GAAGCAATCTTACGAAACAA+AGG | + | chr4_1:68839352-68839371 | None:intergenic | 35.0% | |
| GTCGCCATTTATGAGAGAAA+TGG | + | chr4_1:68837272-68837291 | None:intergenic | 40.0% | |
| !!! | GATGATACTGGTTTTGCCAA+CGG | + | chr4_1:68837342-68837361 | None:intergenic | 40.0% |
| CAAATTTGACACCACCTATC+AGG | - | chr4_1:68837379-68837398 | Msa0567520:CDS | 40.0% | |
| GAAGAATTGAACCTGATAGG+TGG | + | chr4_1:68837393-68837412 | None:intergenic | 40.0% | |
| CGAACTCTTCTTCCATTCAA+GGG | + | chr4_1:68837769-68837788 | None:intergenic | 40.0% | |
| ACGAACTCTTCTTCCATTCA+AGG | + | chr4_1:68837770-68837789 | None:intergenic | 40.0% | |
| ATGGTGCAATTTCTGCTTAG+TGG | - | chr4_1:68837880-68837899 | Msa0567520:intron | 40.0% | |
| ! | TCTGCTTAGTGGATAAAGCT+TGG | - | chr4_1:68837891-68837910 | Msa0567520:intron | 40.0% |
| TAGCAATCTAGCAACATAGG+GGG | + | chr4_1:68838011-68838030 | None:intergenic | 40.0% | |
| AAAATCCTACACGGCTACAA+CGG | + | chr4_1:68838213-68838232 | None:intergenic | 40.0% | |
| TTAACTTTCAGGGATACTGC+AGG | - | chr4_1:68838277-68838296 | Msa0567520:CDS | 40.0% | |
| !! | TTTATGGCCGCTTTGTTTAC+AGG | - | chr4_1:68838969-68838988 | Msa0567520:intron | 40.0% |
| GATCACATGCATCATAGTTG+AGG | + | chr4_1:68839142-68839161 | None:intergenic | 40.0% | |
| GTATTGGATGAATGCACTGT+GGG | + | chr4_1:68839442-68839461 | None:intergenic | 40.0% | |
| TGTATTGGATGAATGCACTG+TGG | + | chr4_1:68839443-68839462 | None:intergenic | 40.0% | |
| TCCTTGAGTTAATTGGTGTG+TGG | - | chr4_1:68839604-68839623 | Msa0567520:five_prime_UTR | 40.0% | |
| CCTTGAGTTAATTGGTGTGT+GGG | - | chr4_1:68839605-68839624 | Msa0567520:five_prime_UTR | 40.0% | |
| TTCTTAGGCGATCAATCCGT+TGG | - | chr4_1:68837323-68837342 | Msa0567520:three_prime_UTR | 45.0% | |
| GAGTCGTTGAAACCCTTGAA+TGG | - | chr4_1:68837754-68837773 | Msa0567520:intron | 45.0% | |
| GAACTGTTCGTTTGCAGCTT+TGG | - | chr4_1:68838107-68838126 | Msa0567520:intron | 45.0% | |
| !! | GAACACTAACAAGTGGGTTG+AGG | - | chr4_1:68838572-68838591 | Msa0567520:intron | 45.0% |
| !! | TTCACAACCGGTTTTCTGAC+TGG | - | chr4_1:68838705-68838724 | Msa0567520:intron | 45.0% |
| !! | TCACAACCGGTTTTCTGACT+GGG | - | chr4_1:68838706-68838725 | Msa0567520:intron | 45.0% |
| ACCATACCCAGTCAGAAAAC+CGG | + | chr4_1:68838715-68838734 | None:intergenic | 45.0% | |
| ATAGGTCAAGTGTCTTGCAG+TGG | - | chr4_1:68838861-68838880 | Msa0567520:intron | 45.0% | |
| ATCGAAACCAGTGCAAAAGC+AGG | - | chr4_1:68839046-68839065 | Msa0567520:intron | 45.0% | |
| !! | ATTGAAGCCTGCTTTTGCAC+TGG | + | chr4_1:68839056-68839075 | None:intergenic | 45.0% |
| CAGGCTTCAATATCAAGGTC+AGG | - | chr4_1:68839065-68839084 | Msa0567520:intron | 45.0% | |
| GAGGACACAAGAACCAACAT+GGG | + | chr4_1:68839301-68839320 | None:intergenic | 45.0% | |
| TGAGGACACAAGAACCAACA+TGG | + | chr4_1:68839302-68839321 | None:intergenic | 45.0% | |
| TTCATCCAATACAGAGCAGC+AGG | - | chr4_1:68839450-68839469 | Msa0567520:intron | 45.0% | |
| TCATCCAATACAGAGCAGCA+GGG | - | chr4_1:68839451-68839470 | Msa0567520:intron | 45.0% | |
| CCCACACACCAATTAACTCA+AGG | + | chr4_1:68839608-68839627 | None:intergenic | 45.0% | |
| TTGGTGTGTGGGACAAATTG+CGG | - | chr4_1:68839616-68839635 | Msa0567520:five_prime_UTR | 45.0% | |
| TGTGGGACAAATTGCGGTAA+TGG | - | chr4_1:68839622-68839641 | Msa0567520:five_prime_UTR | 45.0% | |
| ACGAGCTTGTATTTGGCGAG+AGG | + | chr4_1:68837302-68837321 | None:intergenic | 50.0% | |
| CATGAAGCGGGTGATGATAC+TGG | + | chr4_1:68837354-68837373 | None:intergenic | 50.0% | |
| !! | CACTAACAAGTGGGTTGAGG+AGG | - | chr4_1:68838575-68838594 | Msa0567520:intron | 50.0% |
| !! | ACCGGTTTTCTGACTGGGTA+TGG | - | chr4_1:68838711-68838730 | Msa0567520:intron | 50.0% |
| ! | AGTTGAGGAGCATGCTCTAG+TGG | + | chr4_1:68839127-68839146 | None:intergenic | 50.0% |
| GAAGAAAGGGTTTCCATCCC+TGG | + | chr4_1:68839382-68839401 | None:intergenic | 50.0% | |
| GAGGAGGTTGCTCATGTTAG+AGG | - | chr4_1:68839473-68839492 | Msa0567520:CDS | 50.0% | |
| TATGGCCGTTGTAGCCGTGT+AGG | - | chr4_1:68838205-68838224 | Msa0567520:CDS | 55.0% | |
| AAGATTGCTTCCGCCTTGCC+AGG | - | chr4_1:68839361-68839380 | Msa0567520:intron | 55.0% | |
| AGATTGCTTCCGCCTTGCCA+GGG | - | chr4_1:68839362-68839381 | Msa0567520:intron | 55.0% | |
| AAGGGTTTCCATCCCTGGCA+AGG | + | chr4_1:68839377-68839396 | None:intergenic | 55.0% | |
| TCCAATACAGAGCAGCAGGG+AGG | - | chr4_1:68839454-68839473 | Msa0567520:intron | 55.0% | |
| TCCTCCCTGCTGCTCTGTAT+TGG | + | chr4_1:68839458-68839477 | None:intergenic | 55.0% | |
| AATACAGAGCAGCAGGGAGG+AGG | - | chr4_1:68839457-68839476 | Msa0567520:intron | 55.0% | |
| ! | GAGGAGGTGCGTCAAGAACG+TGG | - | chr4_1:68838591-68838610 | Msa0567520:intron | 60.0% |
| GGTTTCCATCCCTGGCAAGG+CGG | + | chr4_1:68839374-68839393 | None:intergenic | 60.0% | |
| TGCTTCCGCCTTGCCAGGGA+TGG | - | chr4_1:68839366-68839385 | Msa0567520:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 68837130 | 68839734 | 68837130 | ID=Msa0567520;Name=Msa0567520 |
| chr4_1 | mRNA | 68837130 | 68839734 | 68837130 | ID=Msa0567520-mRNA-1;Parent=Msa0567520;Name=Msa0567520-mRNA-1;_AED=0.10;_eAED=0.10;_QI=154|1|1|1|1|1|6|242|207 |
| chr4_1 | exon | 68837130 | 68837515 | 68837130 | ID=Msa0567520-mRNA-1:exon:22857;Parent=Msa0567520-mRNA-1 |
| chr4_1 | exon | 68837783 | 68837873 | 68837783 | ID=Msa0567520-mRNA-1:exon:22856;Parent=Msa0567520-mRNA-1 |
| chr4_1 | exon | 68838197 | 68838308 | 68838197 | ID=Msa0567520-mRNA-1:exon:22855;Parent=Msa0567520-mRNA-1 |
| chr4_1 | exon | 68838488 | 68838576 | 68838488 | ID=Msa0567520-mRNA-1:exon:22854;Parent=Msa0567520-mRNA-1 |
| chr4_1 | exon | 68838736 | 68838806 | 68838736 | ID=Msa0567520-mRNA-1:exon:22853;Parent=Msa0567520-mRNA-1 |
| chr4_1 | exon | 68839464 | 68839734 | 68839464 | ID=Msa0567520-mRNA-1:exon:22852;Parent=Msa0567520-mRNA-1 |
| chr4_1 | five_prime_UTR | 68839581 | 68839734 | 68839581 | ID=Msa0567520-mRNA-1:five_prime_utr;Parent=Msa0567520-mRNA-1 |
| chr4_1 | CDS | 68839464 | 68839580 | 68839464 | ID=Msa0567520-mRNA-1:cds;Parent=Msa0567520-mRNA-1 |
| chr4_1 | CDS | 68838736 | 68838806 | 68838736 | ID=Msa0567520-mRNA-1:cds;Parent=Msa0567520-mRNA-1 |
| chr4_1 | CDS | 68838488 | 68838576 | 68838488 | ID=Msa0567520-mRNA-1:cds;Parent=Msa0567520-mRNA-1 |
| chr4_1 | CDS | 68838197 | 68838308 | 68838197 | ID=Msa0567520-mRNA-1:cds;Parent=Msa0567520-mRNA-1 |
| chr4_1 | CDS | 68837783 | 68837873 | 68837783 | ID=Msa0567520-mRNA-1:cds;Parent=Msa0567520-mRNA-1 |
| chr4_1 | CDS | 68837372 | 68837515 | 68837372 | ID=Msa0567520-mRNA-1:cds;Parent=Msa0567520-mRNA-1 |
| chr4_1 | three_prime_UTR | 68837130 | 68837371 | 68837130 | ID=Msa0567520-mRNA-1:three_prime_utr;Parent=Msa0567520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
