Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063360 | sp|Q9SDW0|TGT3A_ARATH | 55.056 | 267 | 96 | 3 | 49 | 291 | 47 | 313 | 1.16e-73 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063360 | A0A072U082 | 97.279 | 294 | 6 | 2 | 1 | 293 | 1 | 293 | 0.0 | 575 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1063360 | TF | Trihelix |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026630 | Msa1063360 | 0.810177 | 1.312108e-50 | -8.615850e-47 |
| Msa0043850 | Msa1063360 | 0.831057 | 2.071003e-55 | -8.615850e-47 |
| Msa0052360 | Msa1063360 | 0.854842 | 9.403293e-62 | -8.615850e-47 |
| Msa0061500 | Msa1063360 | 0.805824 | 1.107510e-49 | -8.615850e-47 |
| Msa0077370 | Msa1063360 | 0.811435 | 7.011672e-51 | -8.615850e-47 |
| Msa0079720 | Msa1063360 | 0.802165 | 6.385273e-49 | -8.615850e-47 |
| Msa0082420 | Msa1063360 | 0.817046 | 4.038960e-52 | -8.615850e-47 |
| Msa0090510 | Msa1063360 | 0.845003 | 5.324102e-59 | -8.615850e-47 |
| Msa0094710 | Msa1063360 | 0.816385 | 5.681999e-52 | -8.615850e-47 |
| Msa0097370 | Msa1063360 | 0.850969 | 1.203632e-60 | -8.615850e-47 |
| Msa0102140 | Msa1063360 | 0.851110 | 1.098781e-60 | -8.615850e-47 |
| Msa0117520 | Msa1063360 | 0.831582 | 1.538752e-55 | -8.615850e-47 |
| Msa0613110 | Msa1063360 | 0.821922 | 3.120647e-53 | -8.615850e-47 |
| Msa0613340 | Msa1063360 | 0.812027 | 5.212042e-51 | -8.615850e-47 |
| Msa0613420 | Msa1063360 | 0.823742 | 1.175576e-53 | -8.615850e-47 |
| Msa0623990 | Msa1063360 | 0.818216 | 2.201032e-52 | -8.615850e-47 |
| Msa0624060 | Msa1063360 | 0.825206 | 5.319543e-54 | -8.615850e-47 |
| Msa0641130 | Msa1063360 | 0.837703 | 4.444658e-57 | -8.615850e-47 |
| Msa0654900 | Msa1063360 | 0.812573 | 3.960862e-51 | -8.615850e-47 |
| Msa0658680 | Msa1063360 | 0.821742 | 3.434624e-53 | -8.615850e-47 |
| Msa0673120 | Msa1063360 | 0.816844 | 4.484162e-52 | -8.615850e-47 |
| Msa0676130 | Msa1063360 | 0.817993 | 2.471359e-52 | -8.615850e-47 |
| Msa0676180 | Msa1063360 | 0.823927 | 1.064328e-53 | -8.615850e-47 |
| Msa0679670 | Msa1063360 | 0.805453 | 1.325536e-49 | -8.615850e-47 |
| Msa0698450 | Msa1063360 | 0.809288 | 2.037208e-50 | -8.615850e-47 |
| Msa0698460 | Msa1063360 | 0.813880 | 2.046090e-51 | -8.615850e-47 |
| Msa0703810 | Msa1063360 | 0.800496 | 1.402838e-48 | -8.615850e-47 |
| Msa0705990 | Msa1063360 | 0.811531 | 6.684188e-51 | -8.615850e-47 |
| Msa0712840 | Msa1063360 | 0.807120 | 5.903733e-50 | -8.615850e-47 |
| Msa0733010 | Msa1063360 | 0.823654 | 1.233241e-53 | -8.615850e-47 |
| Msa0738030 | Msa1063360 | 0.821660 | 3.588730e-53 | -8.615850e-47 |
| Msa0741070 | Msa1063360 | 0.808576 | 2.893729e-50 | -8.615850e-47 |
| Msa0742430 | Msa1063360 | 0.818634 | 1.769298e-52 | -8.615850e-47 |
| Msa0779510 | Msa1063360 | 0.823253 | 1.529935e-53 | -8.615850e-47 |
| Msa0795340 | Msa1063360 | 0.812983 | 3.222042e-51 | -8.615850e-47 |
| Msa0800460 | Msa1063360 | 0.801236 | 9.903986e-49 | -8.615850e-47 |
| Msa0808100 | Msa1063360 | 0.814681 | 1.360871e-51 | -8.615850e-47 |
| Msa0809940 | Msa1063360 | 0.819156 | 1.346227e-52 | -8.615850e-47 |
| Msa0823540 | Msa1063360 | 0.856637 | 2.812361e-62 | -8.615850e-47 |
| Msa0136630 | Msa1063360 | 0.815652 | 8.282453e-52 | -8.615850e-47 |
| Msa0137980 | Msa1063360 | 0.816737 | 4.740055e-52 | -8.615850e-47 |
| Msa0138020 | Msa1063360 | 0.809869 | 1.528542e-50 | -8.615850e-47 |
| Msa0144530 | Msa1063360 | 0.825579 | 4.341285e-54 | -8.615850e-47 |
| Msa0152560 | Msa1063360 | 0.829296 | 5.571438e-55 | -8.615850e-47 |
| Msa0160960 | Msa1063360 | 0.823856 | 1.105390e-53 | -8.615850e-47 |
| Msa0172080 | Msa1063360 | 0.801908 | 7.209926e-49 | -8.615850e-47 |
| Msa0183910 | Msa1063360 | 0.820992 | 5.117409e-53 | -8.615850e-47 |
| Msa0217700 | Msa1063360 | 0.805597 | 1.236150e-49 | -8.615850e-47 |
| Msa0218460 | Msa1063360 | 0.800572 | 1.353184e-48 | -8.615850e-47 |
| Msa0222980 | Msa1063360 | 0.806594 | 7.624157e-50 | -8.615850e-47 |
| Msa0364790 | Msa1063360 | 0.811276 | 7.591208e-51 | -8.615850e-47 |
| Msa0371950 | Msa1063360 | 0.808791 | 2.603413e-50 | -8.615850e-47 |
| Msa0374890 | Msa1063360 | 0.819152 | 1.349365e-52 | -8.615850e-47 |
| Msa0375070 | Msa1063360 | 0.805354 | 1.389948e-49 | -8.615850e-47 |
| Msa0382370 | Msa1063360 | 0.800716 | 1.264637e-48 | -8.615850e-47 |
| Msa0388730 | Msa1063360 | 0.821617 | 3.670451e-53 | -8.615850e-47 |
| Msa0403470 | Msa1063360 | -0.808656 | 2.782589e-50 | -8.615850e-47 |
| Msa0403490 | Msa1063360 | 0.824373 | 8.361611e-54 | -8.615850e-47 |
| Msa0414140 | Msa1063360 | 0.800888 | 1.166535e-48 | -8.615850e-47 |
| Msa0431900 | Msa1063360 | 0.807466 | 4.985607e-50 | -8.615850e-47 |
| Msa0432160 | Msa1063360 | 0.817737 | 2.824085e-52 | -8.615850e-47 |
| Msa0470360 | Msa1063360 | 0.831067 | 2.059004e-55 | -8.615850e-47 |
| Msa0470880 | Msa1063360 | 0.841222 | 5.415203e-58 | -8.615850e-47 |
| Msa0476680 | Msa1063360 | 0.821285 | 4.380003e-53 | -8.615850e-47 |
| Msa0999680 | Msa1063360 | 0.827352 | 1.640721e-54 | -8.615850e-47 |
| Msa1011250 | Msa1063360 | 0.819052 | 1.421593e-52 | -8.615850e-47 |
| Msa1024680 | Msa1063360 | 0.864212 | 1.430364e-64 | -8.615850e-47 |
| Msa1026640 | Msa1063360 | 0.819351 | 1.215785e-52 | -8.615850e-47 |
| Msa1031460 | Msa1063360 | 0.816417 | 5.589282e-52 | -8.615850e-47 |
| Msa1043120 | Msa1063360 | 0.800987 | 1.113611e-48 | -8.615850e-47 |
| Msa1062040 | Msa1063360 | 0.807196 | 5.688569e-50 | -8.615850e-47 |
| Msa1063360 | Msa1063400 | 0.805551 | 1.264013e-49 | -8.615850e-47 |
| Msa1063360 | Msa1063420 | 0.860850 | 1.548693e-63 | -8.615850e-47 |
| Msa1063360 | Msa1070540 | 0.837864 | 4.041756e-57 | -8.615850e-47 |
| Msa1063360 | Msa1082360 | 0.807752 | 4.336123e-50 | -8.615850e-47 |
| Msa1063360 | Msa1089460 | 0.817456 | 3.266842e-52 | -8.615850e-47 |
| Msa1063360 | Msa1101240 | 0.837018 | 6.656871e-57 | -8.615850e-47 |
| Msa1063360 | Msa1107200 | 0.820561 | 6.427454e-53 | -8.615850e-47 |
| Msa1063360 | Msa1108710 | 0.898039 | 7.839078e-77 | -8.615850e-47 |
| Msa1063360 | Msa1109810 | 0.806369 | 8.507318e-50 | -8.615850e-47 |
| Msa1063360 | Msa1122150 | 0.821339 | 4.255357e-53 | -8.615850e-47 |
| Msa1063360 | Msa1150780 | 0.814443 | 1.536871e-51 | -8.615850e-47 |
| Msa1063360 | Msa1152400 | 0.894703 | 1.921215e-75 | -8.615850e-47 |
| Msa1063360 | Msa1158390 | 0.833390 | 5.480936e-56 | -8.615850e-47 |
| Msa1063360 | Msa1160560 | 0.824339 | 8.517560e-54 | -8.615850e-47 |
| Msa1063360 | Msa1171140 | 0.800143 | 1.655255e-48 | -8.615850e-47 |
| Msa1063360 | Msa1208990 | 0.821822 | 3.291252e-53 | -8.615850e-47 |
| Msa1063360 | Msa1209190 | 0.810585 | 1.071535e-50 | -8.615850e-47 |
| Msa1063360 | Msa1212050 | 0.805157 | 1.528890e-49 | -8.615850e-47 |
| Msa1063360 | Msa1214170 | 0.830146 | 3.461648e-55 | -8.615850e-47 |
| Msa1063360 | Msa1218580 | 0.820179 | 7.865895e-53 | -8.615850e-47 |
| Msa1063360 | Msa1221330 | 0.800836 | 1.195670e-48 | -8.615850e-47 |
| Msa1063360 | Msa1236440 | 0.855333 | 6.769841e-62 | -8.615850e-47 |
| Msa1063360 | Msa1246360 | 0.801724 | 7.867238e-49 | -8.615850e-47 |
| Msa1063360 | Msa1260060 | 0.809127 | 2.206331e-50 | -8.615850e-47 |
| Msa1063360 | Msa1272010 | 0.841763 | 3.900572e-58 | -8.615850e-47 |
| Msa1063360 | Msa1277670 | 0.855339 | 6.741219e-62 | -8.615850e-47 |
| Msa1063360 | Msa1291450 | 0.819434 | 1.163770e-52 | -8.615850e-47 |
| Msa1063360 | Msa1325410 | -0.820931 | 5.284645e-53 | -8.615850e-47 |
| Msa1063360 | Msa1332050 | 0.800059 | 1.720981e-48 | -8.615850e-47 |
| Msa1063360 | Msa1340200 | 0.800069 | 1.712854e-48 | -8.615850e-47 |
| Msa1063360 | Msa1360020 | 0.831274 | 1.831306e-55 | -8.615850e-47 |
| Msa1063360 | Msa1368610 | 0.803887 | 2.812282e-49 | -8.615850e-47 |
| Msa1063360 | Msa1369920 | -0.833226 | 6.022592e-56 | -8.615850e-47 |
| Msa1063360 | Msa1378410 | 0.825881 | 3.680860e-54 | -8.615850e-47 |
| Msa1063360 | Msa1386890 | 0.803717 | 3.050528e-49 | -8.615850e-47 |
| Msa1063360 | Msa1407760 | 0.818184 | 2.237545e-52 | -8.615850e-47 |
| Msa1063360 | Msa1407880 | 0.815759 | 7.842864e-52 | -8.615850e-47 |
| Msa1063360 | Msa1418970 | 0.828996 | 6.588422e-55 | -8.615850e-47 |
| Msa1063360 | Msa1419840 | 0.835534 | 1.586565e-56 | -8.615850e-47 |
| Msa1063360 | Msa1436600 | 0.812920 | 3.326034e-51 | -8.615850e-47 |
| Msa1063360 | Msa1437330 | 0.807270 | 5.485468e-50 | -8.615850e-47 |
| Msa1063360 | Msa1437730 | 0.821439 | 4.034485e-53 | -8.615850e-47 |
| Msa1063360 | Msa1450440 | 0.819895 | 9.134589e-53 | -8.615850e-47 |
| Msa0240270 | Msa1063360 | 0.828164 | 1.046797e-54 | -8.615850e-47 |
| Msa0241140 | Msa1063360 | 0.810540 | 1.095381e-50 | -8.615850e-47 |
| Msa0264310 | Msa1063360 | 0.804542 | 2.055170e-49 | -8.615850e-47 |
| Msa0269560 | Msa1063360 | 0.820363 | 7.135070e-53 | -8.615850e-47 |
| Msa0271550 | Msa1063360 | 0.800824 | 1.202367e-48 | -8.615850e-47 |
| Msa0278580 | Msa1063360 | 0.815583 | 8.581588e-52 | -8.615850e-47 |
| Msa0307310 | Msa1063360 | 0.813859 | 2.068257e-51 | -8.615850e-47 |
| Msa0308440 | Msa1063360 | 0.805773 | 1.135627e-49 | -8.615850e-47 |
| Msa0317960 | Msa1063360 | 0.817499 | 3.194821e-52 | -8.615850e-47 |
| Msa0362160 | Msa1063360 | 0.837697 | 4.460757e-57 | -8.615850e-47 |
| Msa0520770 | Msa1063360 | 0.803559 | 3.290138e-49 | -8.615850e-47 |
| Msa0521010 | Msa1063360 | 0.822731 | 2.025055e-53 | -8.615850e-47 |
| Msa0529000 | Msa1063360 | 0.812755 | 3.613374e-51 | -8.615850e-47 |
| Msa0545020 | Msa1063360 | 0.809796 | 1.585425e-50 | -8.615850e-47 |
| Msa0545050 | Msa1063360 | 0.832397 | 9.679080e-56 | -8.615850e-47 |
| Msa0556660 | Msa1063360 | 0.804918 | 1.715078e-49 | -8.615850e-47 |
| Msa0566350 | Msa1063360 | 0.813305 | 2.737827e-51 | -8.615850e-47 |
| Msa0566750 | Msa1063360 | 0.808220 | 3.447421e-50 | -8.615850e-47 |
| Msa0581400 | Msa1063360 | 0.803894 | 2.803234e-49 | -8.615850e-47 |
| Msa0592330 | Msa1063360 | 0.812114 | 4.990230e-51 | -8.615850e-47 |
| Msa0594050 | Msa1063360 | 0.802433 | 5.623499e-49 | -8.615850e-47 |
| Msa0600590 | Msa1063360 | 0.836599 | 8.516244e-57 | -8.615850e-47 |
| Msa0857940 | Msa1063360 | 0.806586 | 7.656854e-50 | -8.615850e-47 |
| Msa0862620 | Msa1063360 | 0.838448 | 2.858570e-57 | -8.615850e-47 |
| Msa0863720 | Msa1063360 | 0.823893 | 1.083986e-53 | -8.615850e-47 |
| Msa0878220 | Msa1063360 | 0.812268 | 4.616816e-51 | -8.615850e-47 |
| Msa0880810 | Msa1063360 | 0.821815 | 3.302757e-53 | -8.615850e-47 |
| Msa0894710 | Msa1063360 | 0.825089 | 5.667251e-54 | -8.615850e-47 |
| Msa0899970 | Msa1063360 | 0.828968 | 6.693497e-55 | -8.615850e-47 |
| Msa0943970 | Msa1063360 | 0.829715 | 4.408562e-55 | -8.615850e-47 |
| Msa0944020 | Msa1063360 | 0.823618 | 1.256993e-53 | -8.615850e-47 |
| Msa0965080 | Msa1063360 | 0.821294 | 4.359469e-53 | -8.615850e-47 |
| Msa0965290 | Msa1063360 | 0.833784 | 4.372051e-56 | -8.615850e-47 |
| Msa0975320 | Msa1063360 | 0.825283 | 5.101450e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063360 | MtrunA17_Chr7g0242591 | 97.279 | 294 | 6 | 2 | 1 | 293 | 1 | 293 | 0.0 | 575 |
| Msa1063360 | MtrunA17_Chr4g0006261 | 76.984 | 252 | 57 | 1 | 41 | 291 | 28 | 279 | 4.90e-119 | 342 |
| Msa1063360 | MtrunA17_Chr5g0409071 | 46.619 | 281 | 123 | 8 | 37 | 292 | 23 | 301 | 1.48e-56 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1063360 | AT5G01380.1 | 55.056 | 267 | 96 | 3 | 49 | 291 | 47 | 313 | 1.18e-74 | 231 |
| Msa1063360 | AT2G38250.1 | 57.299 | 274 | 96 | 4 | 33 | 291 | 19 | 286 | 3.28e-74 | 229 |
| Msa1063360 | AT3G25990.1 | 31.858 | 113 | 74 | 1 | 54 | 163 | 55 | 167 | 6.11e-14 | 71.6 |
| Msa1063360 | AT1G13450.3 | 33.696 | 92 | 61 | 0 | 54 | 145 | 87 | 178 | 1.11e-11 | 64.3 |
| Msa1063360 | AT1G13450.2 | 33.696 | 92 | 61 | 0 | 54 | 145 | 87 | 178 | 1.11e-11 | 64.3 |
| Msa1063360 | AT1G13450.1 | 33.696 | 92 | 61 | 0 | 54 | 145 | 87 | 178 | 1.92e-11 | 64.3 |
| Msa1063360 | AT1G13450.4 | 33.696 | 92 | 61 | 0 | 54 | 145 | 87 | 178 | 3.01e-11 | 62.4 |
Find 69 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGAAACTCCTTTGTTTCT+TGG | 0.162176 | 7_2:-55222281 | None:intergenic |
| AGAACTAGATCAAACTTTCA+TGG | 0.325286 | 7_2:+55222314 | Msa1063360:CDS |
| GCTTGAAGCTCATTGTAAAA+TGG | 0.335464 | 7_2:-55222994 | None:intergenic |
| AAACCTTGTTACTCGCTATA+AGG | 0.349897 | 7_2:+55222434 | Msa1063360:CDS |
| GTTGATGTTGTTGATGATGT+TGG | 0.399503 | 7_2:-55222131 | None:intergenic |
| CAAAGAGGAACAAACAGCTT+TGG | 0.409902 | 7_2:+55222340 | Msa1063360:CDS |
| TGAGAGGAGATTGAAGGAGA+TGG | 0.420471 | 7_2:+55223305 | Msa1063360:CDS |
| AAAGAGGAACAAACAGCTTT+GGG | 0.427051 | 7_2:+55222341 | Msa1063360:CDS |
| CTCTAACACTATGAAGGAAA+AGG | 0.429380 | 7_2:+55222371 | Msa1063360:CDS |
| CAACATGCTCATAACATCAT+AGG | 0.432593 | 7_2:+55222207 | Msa1063360:CDS |
| TGGAACAAAGATGGAGAGAA+AGG | 0.438127 | 7_2:+55223373 | Msa1063360:CDS |
| GAAGGATTAGAGAGGAAGCT+AGG | 0.463838 | 7_2:+55223406 | Msa1063360:CDS |
| GGAGATTGAAGGAGATGGAG+TGG | 0.466184 | 7_2:+55223310 | Msa1063360:CDS |
| TCTAACACTATGAAGGAAAA+GGG | 0.470472 | 7_2:+55222372 | Msa1063360:CDS |
| ATATATGTAGGTGGAGGGTA+TGG | 0.470701 | 7_2:-55221895 | None:intergenic |
| AGATTCTTGAGGAGTTTATG+AGG | 0.475642 | 7_2:+55223229 | Msa1063360:CDS |
| TCAATGGATGGAAGCATTTG+AGG | 0.478413 | 7_2:+55223272 | Msa1063360:CDS |
| TCTGAGGATGAAGAAGAGTT+AGG | 0.481694 | 7_2:+55223096 | Msa1063360:CDS |
| GAGAATATATATGTAGGTGG+AGG | 0.485303 | 7_2:-55221901 | None:intergenic |
| AAGGAGGGTCAAAGAAGAAA+GGG | 0.488338 | 7_2:+55223061 | Msa1063360:CDS |
| GATGGAGTGGAGACAAAGAA+TGG | 0.488486 | 7_2:+55223323 | Msa1063360:CDS |
| GGAGAATGAGAGGAGATTGA+AGG | 0.494385 | 7_2:+55223299 | Msa1063360:CDS |
| AAATGCAAATGGAAGCTCAA+TGG | 0.497271 | 7_2:+55223256 | Msa1063360:CDS |
| TATGAGGCAACAAATGCAAA+TGG | 0.498234 | 7_2:+55223245 | Msa1063360:CDS |
| GGTTAATGATGGAACAAAGA+TGG | 0.500019 | 7_2:+55223364 | Msa1063360:CDS |
| GTTAGGCAATGAAGAAAGTG+AGG | 0.500463 | 7_2:+55223113 | Msa1063360:CDS |
| GAAGGAGGGTCAAAGAAGAA+AGG | 0.513151 | 7_2:+55223060 | Msa1063360:CDS |
| GAGGGTATGGTGTGAACAGA+AGG | 0.514895 | 7_2:-55221882 | None:intergenic |
| GAGACAAAGAATGGAAGCAT+TGG | 0.518130 | 7_2:+55223332 | Msa1063360:CDS |
| AAAGGTAAAATGATAATTGG+TGG | 0.519046 | 7_2:+55223171 | Msa1063360:CDS |
| CAAGGATGCAAAGAATGCTA+TGG | 0.520600 | 7_2:+55223028 | Msa1063360:CDS |
| GAGAAAGGGAAGAACAAAGA+AGG | 0.520747 | 7_2:+55223388 | Msa1063360:CDS |
| GGAACAAAGATGGAGAGAAA+GGG | 0.522554 | 7_2:+55223374 | Msa1063360:CDS |
| TAGTGGTAGCAACAATTTGA+AGG | 0.523300 | 7_2:+55223206 | Msa1063360:CDS |
| AGTTATCTCTAACACTATGA+AGG | 0.525230 | 7_2:+55222365 | Msa1063360:CDS |
| TCACGGATAGATTTCCTCAA+TGG | 0.529342 | 7_2:+55222253 | Msa1063360:CDS |
| GGTGGAGGAAATGATAATAG+TGG | 0.531218 | 7_2:+55223189 | Msa1063360:CDS |
| TGGAAGCATTGGAGAATGAG+AGG | 0.532379 | 7_2:+55223343 | Msa1063360:CDS |
| GGAGAATGAGAGGTTAATGA+TGG | 0.535043 | 7_2:+55223353 | Msa1063360:CDS |
| TCGTGTAAGAAGAGAAGAAG+AGG | 0.537803 | 7_2:-55222010 | None:intergenic |
| GATAGGGAGAATATATATGT+AGG | 0.544448 | 7_2:-55221907 | None:intergenic |
| CAGAACAGTGCAAGTGCAAG+TGG | 0.545159 | 7_2:+55222409 | Msa1063360:CDS |
| CAATTTGAAGGAGATTCTTG+AGG | 0.551112 | 7_2:+55223218 | Msa1063360:CDS |
| GGTAAAATGATAATTGGTGG+AGG | 0.559022 | 7_2:+55223174 | Msa1063360:CDS |
| AAATGGAAATTGTTGTCTCA+TGG | 0.560448 | 7_2:-55222977 | None:intergenic |
| AAGGATTAGAGAGGAAGCTA+GGG | 0.562239 | 7_2:+55223407 | Msa1063360:CDS |
| TAGTGTTAACGTTGATGTCA+CGG | 0.564347 | 7_2:+55222236 | Msa1063360:CDS |
| AGGGAGAATATATATGTAGG+TGG | 0.567126 | 7_2:-55221904 | None:intergenic |
| GTTTCTTGGATACTCCATTG+AGG | 0.570470 | 7_2:-55222267 | None:intergenic |
| ATGCTATGGGCTGAAGCAGA+AGG | 0.573045 | 7_2:+55223042 | Msa1063360:CDS |
| GGATGGAAGCATTTGAGGCA+AGG | 0.573712 | 7_2:+55223277 | Msa1063360:CDS |
| AGAATATATATGTAGGTGGA+GGG | 0.578546 | 7_2:-55221900 | None:intergenic |
| TTGAGGCAAGGGAGAATGAG+AGG | 0.584023 | 7_2:+55223289 | Msa1063360:CDS |
| GCAAATGGAAGCTCAATGGA+TGG | 0.584747 | 7_2:+55223260 | Msa1063360:CDS |
| GATGGAAGCATTTGAGGCAA+GGG | 0.587229 | 7_2:+55223278 | Msa1063360:CDS |
| AGAAAGTGAGGGAGATCACA+AGG | 0.594638 | 7_2:+55223125 | Msa1063360:CDS |
| TTAGGCAATGAAGAAAGTGA+GGG | 0.597635 | 7_2:+55223114 | Msa1063360:CDS |
| CTATGGGCTGAAGCAGAAGG+AGG | 0.599474 | 7_2:+55223045 | Msa1063360:CDS |
| AAACTTTCATGGAGACAAAG+AGG | 0.604350 | 7_2:+55222325 | Msa1063360:CDS |
| AGAACAAAGAAGGATTAGAG+AGG | 0.604574 | 7_2:+55223398 | Msa1063360:CDS |
| TATAAAGGGATGTGAAACAA+TGG | 0.607384 | 7_2:+55222945 | Msa1063360:intron |
| ATGGAGTATCCAAGAAACAA+AGG | 0.617542 | 7_2:+55222272 | Msa1063360:CDS |
| AGGGGTGCATGTATCTTCTG+AGG | 0.631436 | 7_2:+55223080 | Msa1063360:CDS |
| AAGTTTGATCTAGTTCTGAA+CGG | 0.639250 | 7_2:-55222308 | None:intergenic |
| AAGGATGCAAAGAATGCTAT+GGG | 0.642173 | 7_2:+55223029 | Msa1063360:CDS |
| GTACCTTATAGCGAGTAACA+AGG | 0.656453 | 7_2:-55222437 | None:intergenic |
| AGGAGGGTCAAAGAAGAAAG+GGG | 0.670389 | 7_2:+55223062 | Msa1063360:CDS |
| TATGGGCTGAAGCAGAAGGA+GGG | 0.673793 | 7_2:+55223046 | Msa1063360:CDS |
| GAAAGTGAGGGAGATCACAA+GGG | 0.730407 | 7_2:+55223126 | Msa1063360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGTTAAACTTTTTTTT+TGG | + | chr7_2:55222649-55222668 | Msa1063360:intron | 10.0% |
| !!! | ATTTTGTTAAACTTTTTTTT+TGG | + | chr7_2:55222649-55222668 | Msa1063360:intron | 10.0% |
| !! | TAAAAAAAAACAAAAGCAAA+AGG | - | chr7_2:55222084-55222103 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTCAACTTCAA+TGG | + | chr7_2:55222095-55222114 | Msa1063360:exon | 15.0% |
| !!! | TATTGTTTTGTTTATGTTTT+TGG | + | chr7_2:55222920-55222939 | Msa1063360:intron | 15.0% |
| !!! | ATTGTTTTGTTTATGTTTTT+GGG | + | chr7_2:55222921-55222940 | Msa1063360:intron | 15.0% |
| !! | ATTAAAAAGAAGAAGAAAAA+AGG | + | chr7_2:55223153-55223172 | Msa1063360:CDS | 15.0% |
| !! | AAAAAAGGTAAAATGATAAT+TGG | + | chr7_2:55223168-55223187 | Msa1063360:CDS | 15.0% |
| !! | TAAAAAAAAACAAAAGCAAA+AGG | - | chr7_2:55222084-55222103 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATTCAACTTCAA+TGG | + | chr7_2:55222095-55222114 | Msa1063360:exon | 15.0% |
| !!! | TATTGTTTTGTTTATGTTTT+TGG | + | chr7_2:55222920-55222939 | Msa1063360:intron | 15.0% |
| !!! | ATTGTTTTGTTTATGTTTTT+GGG | + | chr7_2:55222921-55222940 | Msa1063360:intron | 15.0% |
| !! | ATTAAAAAGAAGAAGAAAAA+AGG | + | chr7_2:55223153-55223172 | Msa1063360:CDS | 15.0% |
| !! | AAAAAAGGTAAAATGATAAT+TGG | + | chr7_2:55223168-55223187 | Msa1063360:CDS | 15.0% |
| !! | CACATAGAATTATTAATGAT+TGG | - | chr7_2:55222512-55222531 | None:intergenic | 20.0% |
| !! | AAACTAGAATGATTTATGAT+TGG | - | chr7_2:55222571-55222590 | None:intergenic | 20.0% |
| !! | AAAAGGCAATAAATAAAAAG+TGG | - | chr7_2:55222727-55222746 | None:intergenic | 20.0% |
| !!! | TTTATGTTTTTGGGATATAA+AGG | + | chr7_2:55222930-55222949 | Msa1063360:intron | 20.0% |
| !!! | TTATGTTTTTGGGATATAAA+GGG | + | chr7_2:55222931-55222950 | Msa1063360:intron | 20.0% |
| !! | CACATAGAATTATTAATGAT+TGG | - | chr7_2:55222512-55222531 | None:intergenic | 20.0% |
| !! | AAACTAGAATGATTTATGAT+TGG | - | chr7_2:55222571-55222590 | None:intergenic | 20.0% |
| !! | AAAAGGCAATAAATAAAAAG+TGG | - | chr7_2:55222727-55222746 | None:intergenic | 20.0% |
| !!! | TTTATGTTTTTGGGATATAA+AGG | + | chr7_2:55222930-55222949 | Msa1063360:intron | 20.0% |
| !!! | TTATGTTTTTGGGATATAAA+GGG | + | chr7_2:55222931-55222950 | Msa1063360:intron | 20.0% |
| !!! | AGAAAAAGTTTTGGTGATTT+TGG | - | chr7_2:55221985-55222004 | None:intergenic | 25.0% |
| !! | TTTTTATTCAACTTCAATGG+AGG | + | chr7_2:55222098-55222117 | Msa1063360:exon | 25.0% |
| !! | TTTTATTCAACTTCAATGGA+GGG | + | chr7_2:55222099-55222118 | Msa1063360:exon | 25.0% |
| !!! | GTTAAACTTTTTTTTTGGAC+AGG | + | chr7_2:55222654-55222673 | Msa1063360:intron | 25.0% |
| !!! | TATTGCCTTTTCAATTTGTT+AGG | + | chr7_2:55222736-55222755 | Msa1063360:intron | 25.0% |
| !!! | ATTGCCTTTTCAATTTGTTA+GGG | + | chr7_2:55222737-55222756 | Msa1063360:intron | 25.0% |
| !! | TTTATATTGTGAGCTTTTCA+TGG | + | chr7_2:55222866-55222885 | Msa1063360:intron | 25.0% |
| ! | AAAGGTAAAATGATAATTGG+TGG | + | chr7_2:55223171-55223190 | Msa1063360:CDS | 25.0% |
| !!! | AGAAAAAGTTTTGGTGATTT+TGG | - | chr7_2:55221985-55222004 | None:intergenic | 25.0% |
| !! | TTTTTATTCAACTTCAATGG+AGG | + | chr7_2:55222098-55222117 | Msa1063360:exon | 25.0% |
| !! | TTTTATTCAACTTCAATGGA+GGG | + | chr7_2:55222099-55222118 | Msa1063360:exon | 25.0% |
| !!! | GTTAAACTTTTTTTTTGGAC+AGG | + | chr7_2:55222654-55222673 | Msa1063360:intron | 25.0% |
| !!! | TATTGCCTTTTCAATTTGTT+AGG | + | chr7_2:55222736-55222755 | Msa1063360:intron | 25.0% |
| !!! | ATTGCCTTTTCAATTTGTTA+GGG | + | chr7_2:55222737-55222756 | Msa1063360:intron | 25.0% |
| !! | TTTATATTGTGAGCTTTTCA+TGG | + | chr7_2:55222866-55222885 | Msa1063360:intron | 25.0% |
| ! | AAAGGTAAAATGATAATTGG+TGG | + | chr7_2:55223171-55223190 | Msa1063360:CDS | 25.0% |
| AGAATATATATGTAGGTGGA+GGG | - | chr7_2:55221903-55221922 | None:intergenic | 30.0% | |
| GATAGGGAGAATATATATGT+AGG | - | chr7_2:55221910-55221929 | None:intergenic | 30.0% | |
| AGATGAGAGAGAAAAAGATA+GGG | - | chr7_2:55221926-55221945 | None:intergenic | 30.0% | |
| AAGATGAGAGAGAAAAAGAT+AGG | - | chr7_2:55221927-55221946 | None:intergenic | 30.0% | |
| !!! | AGTTTTGGTGATTTTGGTTA+TGG | - | chr7_2:55221979-55221998 | None:intergenic | 30.0% |
| ! | GAGGCTTATAGAAAAAGTTT+TGG | - | chr7_2:55221994-55222013 | None:intergenic | 30.0% |
| ! | TAAGAAACTCCTTTGTTTCT+TGG | - | chr7_2:55222284-55222303 | None:intergenic | 30.0% |
| !! | AAGTTTGATCTAGTTCTGAA+CGG | - | chr7_2:55222311-55222330 | None:intergenic | 30.0% |
| AGAACTAGATCAAACTTTCA+TGG | + | chr7_2:55222314-55222333 | Msa1063360:CDS | 30.0% | |
| AGTTATCTCTAACACTATGA+AGG | + | chr7_2:55222365-55222384 | Msa1063360:CDS | 30.0% | |
| TCTAACACTATGAAGGAAAA+GGG | + | chr7_2:55222372-55222391 | Msa1063360:CDS | 30.0% | |
| !!! | TTGCCTTTTCAATTTGTTAG+GGG | + | chr7_2:55222738-55222757 | Msa1063360:intron | 30.0% |
| ! | TTTTCTCTCTCATGAATCAA+AGG | + | chr7_2:55222767-55222786 | Msa1063360:intron | 30.0% |
| TTTCTCTCTCATGAATCAAA+GGG | + | chr7_2:55222768-55222787 | Msa1063360:intron | 30.0% | |
| TATAAAGGGATGTGAAACAA+TGG | + | chr7_2:55222945-55222964 | Msa1063360:intron | 30.0% | |
| AAATGGAAATTGTTGTCTCA+TGG | - | chr7_2:55222980-55222999 | None:intergenic | 30.0% | |
| !!! | TTCAAGCTATTTTTAGTGCA+AGG | + | chr7_2:55223010-55223029 | Msa1063360:CDS | 30.0% |
| AGAATATATATGTAGGTGGA+GGG | - | chr7_2:55221903-55221922 | None:intergenic | 30.0% | |
| GATAGGGAGAATATATATGT+AGG | - | chr7_2:55221910-55221929 | None:intergenic | 30.0% | |
| AGATGAGAGAGAAAAAGATA+GGG | - | chr7_2:55221926-55221945 | None:intergenic | 30.0% | |
| AAGATGAGAGAGAAAAAGAT+AGG | - | chr7_2:55221927-55221946 | None:intergenic | 30.0% | |
| !!! | AGTTTTGGTGATTTTGGTTA+TGG | - | chr7_2:55221979-55221998 | None:intergenic | 30.0% |
| ! | GAGGCTTATAGAAAAAGTTT+TGG | - | chr7_2:55221994-55222013 | None:intergenic | 30.0% |
| ! | TAAGAAACTCCTTTGTTTCT+TGG | - | chr7_2:55222284-55222303 | None:intergenic | 30.0% |
| !! | AAGTTTGATCTAGTTCTGAA+CGG | - | chr7_2:55222311-55222330 | None:intergenic | 30.0% |
| AGAACTAGATCAAACTTTCA+TGG | + | chr7_2:55222314-55222333 | Msa1063360:CDS | 30.0% | |
| AGTTATCTCTAACACTATGA+AGG | + | chr7_2:55222365-55222384 | Msa1063360:CDS | 30.0% | |
| TCTAACACTATGAAGGAAAA+GGG | + | chr7_2:55222372-55222391 | Msa1063360:CDS | 30.0% | |
| !!! | TTGCCTTTTCAATTTGTTAG+GGG | + | chr7_2:55222738-55222757 | Msa1063360:intron | 30.0% |
| ! | TTTTCTCTCTCATGAATCAA+AGG | + | chr7_2:55222767-55222786 | Msa1063360:intron | 30.0% |
| TTTCTCTCTCATGAATCAAA+GGG | + | chr7_2:55222768-55222787 | Msa1063360:intron | 30.0% | |
| TATAAAGGGATGTGAAACAA+TGG | + | chr7_2:55222945-55222964 | Msa1063360:intron | 30.0% | |
| AAATGGAAATTGTTGTCTCA+TGG | - | chr7_2:55222980-55222999 | None:intergenic | 30.0% | |
| !!! | TTCAAGCTATTTTTAGTGCA+AGG | + | chr7_2:55223010-55223029 | Msa1063360:CDS | 30.0% |
| GAGAATATATATGTAGGTGG+AGG | - | chr7_2:55221904-55221923 | None:intergenic | 35.0% | |
| AGGGAGAATATATATGTAGG+TGG | - | chr7_2:55221907-55221926 | None:intergenic | 35.0% | |
| !!! | TTTGGTGATTTTGGTTATGG+AGG | - | chr7_2:55221976-55221995 | None:intergenic | 35.0% |
| !! | GTTGATGTTGTTGATGATGT+TGG | - | chr7_2:55222134-55222153 | None:intergenic | 35.0% |
| CAACATGCTCATAACATCAT+AGG | + | chr7_2:55222207-55222226 | Msa1063360:CDS | 35.0% | |
| TAGTGTTAACGTTGATGTCA+CGG | + | chr7_2:55222236-55222255 | Msa1063360:CDS | 35.0% | |
| ! | ATGGAGTATCCAAGAAACAA+AGG | + | chr7_2:55222272-55222291 | Msa1063360:CDS | 35.0% |
| AAACTTTCATGGAGACAAAG+AGG | + | chr7_2:55222325-55222344 | Msa1063360:CDS | 35.0% | |
| AAAGAGGAACAAACAGCTTT+GGG | + | chr7_2:55222341-55222360 | Msa1063360:CDS | 35.0% | |
| CTCTAACACTATGAAGGAAA+AGG | + | chr7_2:55222371-55222390 | Msa1063360:CDS | 35.0% | |
| AAACCTTGTTACTCGCTATA+AGG | + | chr7_2:55222434-55222453 | Msa1063360:CDS | 35.0% | |
| !!! | TGCCTTTTCAATTTGTTAGG+GGG | + | chr7_2:55222739-55222758 | Msa1063360:intron | 35.0% |
| TACCCCCTAACAAATTGAAA+AGG | - | chr7_2:55222744-55222763 | None:intergenic | 35.0% | |
| GCTTGAAGCTCATTGTAAAA+TGG | - | chr7_2:55222997-55223016 | None:intergenic | 35.0% | |
| AAGGATGCAAAGAATGCTAT+GGG | + | chr7_2:55223029-55223048 | Msa1063360:CDS | 35.0% | |
| TTAGGCAATGAAGAAAGTGA+GGG | + | chr7_2:55223114-55223133 | Msa1063360:CDS | 35.0% | |
| GGTAAAATGATAATTGGTGG+AGG | + | chr7_2:55223174-55223193 | Msa1063360:CDS | 35.0% | |
| TAGTGGTAGCAACAATTTGA+AGG | + | chr7_2:55223206-55223225 | Msa1063360:CDS | 35.0% | |
| CAATTTGAAGGAGATTCTTG+AGG | + | chr7_2:55223218-55223237 | Msa1063360:CDS | 35.0% | |
| AGATTCTTGAGGAGTTTATG+AGG | + | chr7_2:55223229-55223248 | Msa1063360:CDS | 35.0% | |
| TATGAGGCAACAAATGCAAA+TGG | + | chr7_2:55223245-55223264 | Msa1063360:CDS | 35.0% | |
| AAATGCAAATGGAAGCTCAA+TGG | + | chr7_2:55223256-55223275 | Msa1063360:CDS | 35.0% | |
| ! | GGTTAATGATGGAACAAAGA+TGG | + | chr7_2:55223364-55223383 | Msa1063360:CDS | 35.0% |
| AGAACAAAGAAGGATTAGAG+AGG | + | chr7_2:55223398-55223417 | Msa1063360:CDS | 35.0% | |
| GAGAATATATATGTAGGTGG+AGG | - | chr7_2:55221904-55221923 | None:intergenic | 35.0% | |
| AGGGAGAATATATATGTAGG+TGG | - | chr7_2:55221907-55221926 | None:intergenic | 35.0% | |
| !!! | TTTGGTGATTTTGGTTATGG+AGG | - | chr7_2:55221976-55221995 | None:intergenic | 35.0% |
| !! | GTTGATGTTGTTGATGATGT+TGG | - | chr7_2:55222134-55222153 | None:intergenic | 35.0% |
| CAACATGCTCATAACATCAT+AGG | + | chr7_2:55222207-55222226 | Msa1063360:CDS | 35.0% | |
| TAGTGTTAACGTTGATGTCA+CGG | + | chr7_2:55222236-55222255 | Msa1063360:CDS | 35.0% | |
| ! | ATGGAGTATCCAAGAAACAA+AGG | + | chr7_2:55222272-55222291 | Msa1063360:CDS | 35.0% |
| AAACTTTCATGGAGACAAAG+AGG | + | chr7_2:55222325-55222344 | Msa1063360:CDS | 35.0% | |
| AAAGAGGAACAAACAGCTTT+GGG | + | chr7_2:55222341-55222360 | Msa1063360:CDS | 35.0% | |
| CTCTAACACTATGAAGGAAA+AGG | + | chr7_2:55222371-55222390 | Msa1063360:CDS | 35.0% | |
| AAACCTTGTTACTCGCTATA+AGG | + | chr7_2:55222434-55222453 | Msa1063360:CDS | 35.0% | |
| !!! | TGCCTTTTCAATTTGTTAGG+GGG | + | chr7_2:55222739-55222758 | Msa1063360:intron | 35.0% |
| TACCCCCTAACAAATTGAAA+AGG | - | chr7_2:55222744-55222763 | None:intergenic | 35.0% | |
| GCTTGAAGCTCATTGTAAAA+TGG | - | chr7_2:55222997-55223016 | None:intergenic | 35.0% | |
| AAGGATGCAAAGAATGCTAT+GGG | + | chr7_2:55223029-55223048 | Msa1063360:CDS | 35.0% | |
| TTAGGCAATGAAGAAAGTGA+GGG | + | chr7_2:55223114-55223133 | Msa1063360:CDS | 35.0% | |
| GGTAAAATGATAATTGGTGG+AGG | + | chr7_2:55223174-55223193 | Msa1063360:CDS | 35.0% | |
| TAGTGGTAGCAACAATTTGA+AGG | + | chr7_2:55223206-55223225 | Msa1063360:CDS | 35.0% | |
| CAATTTGAAGGAGATTCTTG+AGG | + | chr7_2:55223218-55223237 | Msa1063360:CDS | 35.0% | |
| AGATTCTTGAGGAGTTTATG+AGG | + | chr7_2:55223229-55223248 | Msa1063360:CDS | 35.0% | |
| TATGAGGCAACAAATGCAAA+TGG | + | chr7_2:55223245-55223264 | Msa1063360:CDS | 35.0% | |
| AAATGCAAATGGAAGCTCAA+TGG | + | chr7_2:55223256-55223275 | Msa1063360:CDS | 35.0% | |
| ! | GGTTAATGATGGAACAAAGA+TGG | + | chr7_2:55223364-55223383 | Msa1063360:CDS | 35.0% |
| AGAACAAAGAAGGATTAGAG+AGG | + | chr7_2:55223398-55223417 | Msa1063360:CDS | 35.0% | |
| ATATATGTAGGTGGAGGGTA+TGG | - | chr7_2:55221898-55221917 | None:intergenic | 40.0% | |
| TCGTGTAAGAAGAGAAGAAG+AGG | - | chr7_2:55222013-55222032 | None:intergenic | 40.0% | |
| TCACGGATAGATTTCCTCAA+TGG | + | chr7_2:55222253-55222272 | Msa1063360:CDS | 40.0% | |
| GTTTCTTGGATACTCCATTG+AGG | - | chr7_2:55222270-55222289 | None:intergenic | 40.0% | |
| CAAAGAGGAACAAACAGCTT+TGG | + | chr7_2:55222340-55222359 | Msa1063360:CDS | 40.0% | |
| GTACCTTATAGCGAGTAACA+AGG | - | chr7_2:55222440-55222459 | None:intergenic | 40.0% | |
| CAAGGATGCAAAGAATGCTA+TGG | + | chr7_2:55223028-55223047 | Msa1063360:CDS | 40.0% | |
| AAGGAGGGTCAAAGAAGAAA+GGG | + | chr7_2:55223061-55223080 | Msa1063360:CDS | 40.0% | |
| TCTGAGGATGAAGAAGAGTT+AGG | + | chr7_2:55223096-55223115 | Msa1063360:CDS | 40.0% | |
| GTTAGGCAATGAAGAAAGTG+AGG | + | chr7_2:55223113-55223132 | Msa1063360:CDS | 40.0% | |
| GGTGGAGGAAATGATAATAG+TGG | + | chr7_2:55223189-55223208 | Msa1063360:CDS | 40.0% | |
| !! | TCAATGGATGGAAGCATTTG+AGG | + | chr7_2:55223272-55223291 | Msa1063360:CDS | 40.0% |
| ! | GAGACAAAGAATGGAAGCAT+TGG | + | chr7_2:55223332-55223351 | Msa1063360:CDS | 40.0% |
| GGAGAATGAGAGGTTAATGA+TGG | + | chr7_2:55223353-55223372 | Msa1063360:CDS | 40.0% | |
| TGGAACAAAGATGGAGAGAA+AGG | + | chr7_2:55223373-55223392 | Msa1063360:CDS | 40.0% | |
| GGAACAAAGATGGAGAGAAA+GGG | + | chr7_2:55223374-55223393 | Msa1063360:CDS | 40.0% | |
| GAGAAAGGGAAGAACAAAGA+AGG | + | chr7_2:55223388-55223407 | Msa1063360:CDS | 40.0% | |
| AAGGATTAGAGAGGAAGCTA+GGG | + | chr7_2:55223407-55223426 | Msa1063360:CDS | 40.0% | |
| GCTTACAAGAGAAGACATGT+AGG | + | chr7_2:55223470-55223489 | Msa1063360:CDS | 40.0% | |
| ATATATGTAGGTGGAGGGTA+TGG | - | chr7_2:55221898-55221917 | None:intergenic | 40.0% | |
| TCGTGTAAGAAGAGAAGAAG+AGG | - | chr7_2:55222013-55222032 | None:intergenic | 40.0% | |
| TCACGGATAGATTTCCTCAA+TGG | + | chr7_2:55222253-55222272 | Msa1063360:CDS | 40.0% | |
| GTTTCTTGGATACTCCATTG+AGG | - | chr7_2:55222270-55222289 | None:intergenic | 40.0% | |
| CAAAGAGGAACAAACAGCTT+TGG | + | chr7_2:55222340-55222359 | Msa1063360:CDS | 40.0% | |
| GTACCTTATAGCGAGTAACA+AGG | - | chr7_2:55222440-55222459 | None:intergenic | 40.0% | |
| CAAGGATGCAAAGAATGCTA+TGG | + | chr7_2:55223028-55223047 | Msa1063360:CDS | 40.0% | |
| AAGGAGGGTCAAAGAAGAAA+GGG | + | chr7_2:55223061-55223080 | Msa1063360:CDS | 40.0% | |
| TCTGAGGATGAAGAAGAGTT+AGG | + | chr7_2:55223096-55223115 | Msa1063360:CDS | 40.0% | |
| GTTAGGCAATGAAGAAAGTG+AGG | + | chr7_2:55223113-55223132 | Msa1063360:CDS | 40.0% | |
| GGTGGAGGAAATGATAATAG+TGG | + | chr7_2:55223189-55223208 | Msa1063360:CDS | 40.0% | |
| !! | TCAATGGATGGAAGCATTTG+AGG | + | chr7_2:55223272-55223291 | Msa1063360:CDS | 40.0% |
| ! | GAGACAAAGAATGGAAGCAT+TGG | + | chr7_2:55223332-55223351 | Msa1063360:CDS | 40.0% |
| GGAGAATGAGAGGTTAATGA+TGG | + | chr7_2:55223353-55223372 | Msa1063360:CDS | 40.0% | |
| TGGAACAAAGATGGAGAGAA+AGG | + | chr7_2:55223373-55223392 | Msa1063360:CDS | 40.0% | |
| GGAACAAAGATGGAGAGAAA+GGG | + | chr7_2:55223374-55223393 | Msa1063360:CDS | 40.0% | |
| GAGAAAGGGAAGAACAAAGA+AGG | + | chr7_2:55223388-55223407 | Msa1063360:CDS | 40.0% | |
| AAGGATTAGAGAGGAAGCTA+GGG | + | chr7_2:55223407-55223426 | Msa1063360:CDS | 40.0% | |
| !!! | GGTGATTTTGGTTATGGAGG+AGG | - | chr7_2:55221973-55221992 | None:intergenic | 45.0% |
| GAAGGAGGGTCAAAGAAGAA+AGG | + | chr7_2:55223060-55223079 | Msa1063360:CDS | 45.0% | |
| AGGAGGGTCAAAGAAGAAAG+GGG | + | chr7_2:55223062-55223081 | Msa1063360:CDS | 45.0% | |
| AGAAAGTGAGGGAGATCACA+AGG | + | chr7_2:55223125-55223144 | Msa1063360:CDS | 45.0% | |
| GAAAGTGAGGGAGATCACAA+GGG | + | chr7_2:55223126-55223145 | Msa1063360:CDS | 45.0% | |
| GCAAATGGAAGCTCAATGGA+TGG | + | chr7_2:55223260-55223279 | Msa1063360:CDS | 45.0% | |
| !! | GATGGAAGCATTTGAGGCAA+GGG | + | chr7_2:55223278-55223297 | Msa1063360:CDS | 45.0% |
| GGAGAATGAGAGGAGATTGA+AGG | + | chr7_2:55223299-55223318 | Msa1063360:CDS | 45.0% | |
| TGAGAGGAGATTGAAGGAGA+TGG | + | chr7_2:55223305-55223324 | Msa1063360:CDS | 45.0% | |
| GATGGAGTGGAGACAAAGAA+TGG | + | chr7_2:55223323-55223342 | Msa1063360:CDS | 45.0% | |
| !! | TGGAAGCATTGGAGAATGAG+AGG | + | chr7_2:55223343-55223362 | Msa1063360:CDS | 45.0% |
| GAAGGATTAGAGAGGAAGCT+AGG | + | chr7_2:55223406-55223425 | Msa1063360:CDS | 45.0% | |
| !!! | GGTGATTTTGGTTATGGAGG+AGG | - | chr7_2:55221973-55221992 | None:intergenic | 45.0% |
| GAAGGAGGGTCAAAGAAGAA+AGG | + | chr7_2:55223060-55223079 | Msa1063360:CDS | 45.0% | |
| AGGAGGGTCAAAGAAGAAAG+GGG | + | chr7_2:55223062-55223081 | Msa1063360:CDS | 45.0% | |
| AGAAAGTGAGGGAGATCACA+AGG | + | chr7_2:55223125-55223144 | Msa1063360:CDS | 45.0% | |
| GAAAGTGAGGGAGATCACAA+GGG | + | chr7_2:55223126-55223145 | Msa1063360:CDS | 45.0% | |
| GCAAATGGAAGCTCAATGGA+TGG | + | chr7_2:55223260-55223279 | Msa1063360:CDS | 45.0% | |
| !! | GATGGAAGCATTTGAGGCAA+GGG | + | chr7_2:55223278-55223297 | Msa1063360:CDS | 45.0% |
| GGAGAATGAGAGGAGATTGA+AGG | + | chr7_2:55223299-55223318 | Msa1063360:CDS | 45.0% | |
| TGAGAGGAGATTGAAGGAGA+TGG | + | chr7_2:55223305-55223324 | Msa1063360:CDS | 45.0% | |
| GATGGAGTGGAGACAAAGAA+TGG | + | chr7_2:55223323-55223342 | Msa1063360:CDS | 45.0% | |
| !! | TGGAAGCATTGGAGAATGAG+AGG | + | chr7_2:55223343-55223362 | Msa1063360:CDS | 45.0% |
| GAAGGATTAGAGAGGAAGCT+AGG | + | chr7_2:55223406-55223425 | Msa1063360:CDS | 45.0% | |
| ! | GAGGGTATGGTGTGAACAGA+AGG | - | chr7_2:55221885-55221904 | None:intergenic | 50.0% |
| GGAAGAGAGAGAGAGAGAGA+GGG | - | chr7_2:55221952-55221971 | None:intergenic | 50.0% | |
| AGGAAGAGAGAGAGAGAGAG+AGG | - | chr7_2:55221953-55221972 | None:intergenic | 50.0% | |
| CAGAACAGTGCAAGTGCAAG+TGG | + | chr7_2:55222409-55222428 | Msa1063360:CDS | 50.0% | |
| ! | ATGCTATGGGCTGAAGCAGA+AGG | + | chr7_2:55223042-55223061 | Msa1063360:CDS | 50.0% |
| ! | TATGGGCTGAAGCAGAAGGA+GGG | + | chr7_2:55223046-55223065 | Msa1063360:CDS | 50.0% |
| ! | AGGGGTGCATGTATCTTCTG+AGG | + | chr7_2:55223080-55223099 | Msa1063360:CDS | 50.0% |
| !! | GGATGGAAGCATTTGAGGCA+AGG | + | chr7_2:55223277-55223296 | Msa1063360:CDS | 50.0% |
| TTGAGGCAAGGGAGAATGAG+AGG | + | chr7_2:55223289-55223308 | Msa1063360:CDS | 50.0% | |
| GGAGATTGAAGGAGATGGAG+TGG | + | chr7_2:55223310-55223329 | Msa1063360:CDS | 50.0% | |
| ! | GAGGGTATGGTGTGAACAGA+AGG | - | chr7_2:55221885-55221904 | None:intergenic | 50.0% |
| GGAAGAGAGAGAGAGAGAGA+GGG | - | chr7_2:55221952-55221971 | None:intergenic | 50.0% | |
| AGGAAGAGAGAGAGAGAGAG+AGG | - | chr7_2:55221953-55221972 | None:intergenic | 50.0% | |
| CAGAACAGTGCAAGTGCAAG+TGG | + | chr7_2:55222409-55222428 | Msa1063360:CDS | 50.0% | |
| ! | ATGCTATGGGCTGAAGCAGA+AGG | + | chr7_2:55223042-55223061 | Msa1063360:CDS | 50.0% |
| ! | TATGGGCTGAAGCAGAAGGA+GGG | + | chr7_2:55223046-55223065 | Msa1063360:CDS | 50.0% |
| ! | AGGGGTGCATGTATCTTCTG+AGG | + | chr7_2:55223080-55223099 | Msa1063360:CDS | 50.0% |
| !! | GGATGGAAGCATTTGAGGCA+AGG | + | chr7_2:55223277-55223296 | Msa1063360:CDS | 50.0% |
| TTGAGGCAAGGGAGAATGAG+AGG | + | chr7_2:55223289-55223308 | Msa1063360:CDS | 50.0% | |
| GGAGATTGAAGGAGATGGAG+TGG | + | chr7_2:55223310-55223329 | Msa1063360:CDS | 50.0% | |
| ! | CTATGGGCTGAAGCAGAAGG+AGG | + | chr7_2:55223045-55223064 | Msa1063360:CDS | 55.0% |
| ! | CTATGGGCTGAAGCAGAAGG+AGG | + | chr7_2:55223045-55223064 | Msa1063360:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 55221872 | 55223491 | 55221872 | ID=Msa1063360;Name=Msa1063360 |
| chr7_2 | mRNA | 55221872 | 55223491 | 55221872 | ID=Msa1063360-mRNA-1;Parent=Msa1063360;Name=Msa1063360-mRNA-1;_AED=0.01;_eAED=0.01;_QI=242|1|0.5|1|1|1|2|0|293 |
| chr7_2 | exon | 55221872 | 55222455 | 55221872 | ID=Msa1063360-mRNA-1:exon:10235;Parent=Msa1063360-mRNA-1 |
| chr7_2 | exon | 55222952 | 55223491 | 55222952 | ID=Msa1063360-mRNA-1:exon:10236;Parent=Msa1063360-mRNA-1 |
| chr7_2 | five_prime_UTR | 55221872 | 55222113 | 55221872 | ID=Msa1063360-mRNA-1:five_prime_utr;Parent=Msa1063360-mRNA-1 |
| chr7_2 | CDS | 55222114 | 55222455 | 55222114 | ID=Msa1063360-mRNA-1:cds;Parent=Msa1063360-mRNA-1 |
| chr7_2 | CDS | 55222952 | 55223491 | 55222952 | ID=Msa1063360-mRNA-1:cds;Parent=Msa1063360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
