Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014330 | Msa0639610 | 0.801373 | 9.286448e-49 | -8.615850e-47 |
| Msa0015750 | Msa0639610 | 0.813129 | 2.992457e-51 | -8.615850e-47 |
| Msa0016570 | Msa0639610 | 0.817618 | 3.003055e-52 | -8.615850e-47 |
| Msa0016580 | Msa0639610 | 0.832131 | 1.125974e-55 | -8.615850e-47 |
| Msa0056530 | Msa0639610 | 0.832838 | 7.520424e-56 | -8.615850e-47 |
| Msa0102070 | Msa0639610 | 0.839458 | 1.565262e-57 | -8.615850e-47 |
| Msa0110270 | Msa0639610 | 0.818408 | 1.990923e-52 | -8.615850e-47 |
| Msa0604350 | Msa0639610 | 0.800121 | 1.671668e-48 | -8.615850e-47 |
| Msa0639610 | Msa0661230 | 0.814079 | 1.848860e-51 | -8.615850e-47 |
| Msa0639610 | Msa0668260 | 0.802626 | 5.130928e-49 | -8.615850e-47 |
| Msa0639610 | Msa0694370 | 0.809666 | 1.690790e-50 | -8.615850e-47 |
| Msa0639610 | Msa0701010 | 0.801792 | 7.617563e-49 | -8.615850e-47 |
| Msa0639610 | Msa0725850 | 0.829617 | 4.657426e-55 | -8.615850e-47 |
| Msa0639610 | Msa0726140 | 0.854839 | 9.419944e-62 | -8.615850e-47 |
| Msa0639610 | Msa0729800 | 0.849487 | 3.134065e-60 | -8.615850e-47 |
| Msa0639610 | Msa0733290 | 0.830274 | 3.220425e-55 | -8.615850e-47 |
| Msa0639610 | Msa0741990 | 0.810275 | 1.249995e-50 | -8.615850e-47 |
| Msa0639610 | Msa0743810 | 0.878221 | 3.347165e-69 | -8.615850e-47 |
| Msa0639610 | Msa0745060 | 0.851749 | 7.244210e-61 | -8.615850e-47 |
| Msa0639610 | Msa0763440 | 0.811414 | 7.084612e-51 | -8.615850e-47 |
| Msa0639610 | Msa0766630 | 0.826549 | 2.552146e-54 | -8.615850e-47 |
| Msa0639610 | Msa0767720 | 0.836534 | 8.845232e-57 | -8.615850e-47 |
| Msa0639610 | Msa0768370 | 0.826493 | 2.632731e-54 | -8.615850e-47 |
| Msa0639610 | Msa0775300 | 0.818385 | 2.014735e-52 | -8.615850e-47 |
| Msa0639610 | Msa0783160 | 0.878057 | 3.820009e-69 | -8.615850e-47 |
| Msa0639610 | Msa0784290 | 0.814693 | 1.352690e-51 | -8.615850e-47 |
| Msa0639610 | Msa0787600 | 0.811871 | 5.635979e-51 | -8.615850e-47 |
| Msa0639610 | Msa0808010 | 0.854621 | 1.089212e-61 | -8.615850e-47 |
| Msa0639610 | Msa0808020 | 0.849259 | 3.627884e-60 | -8.615850e-47 |
| Msa0639610 | Msa0811080 | 0.839628 | 1.414317e-57 | -8.615850e-47 |
| Msa0639610 | Msa0811270 | 0.862520 | 4.780621e-64 | -8.615850e-47 |
| Msa0639610 | Msa0824590 | 0.835688 | 1.450730e-56 | -8.615850e-47 |
| Msa0639610 | Msa0824600 | 0.829171 | 5.975744e-55 | -8.615850e-47 |
| Msa0639610 | Msa0825860 | 0.859285 | 4.597862e-63 | -8.615850e-47 |
| Msa0639610 | Msa0845930 | 0.823503 | 1.337642e-53 | -8.615850e-47 |
| Msa0639610 | Msa0846210 | 0.808640 | 2.804589e-50 | -8.615850e-47 |
| Msa0639610 | Msa0846330 | 0.840395 | 8.920704e-58 | -8.615850e-47 |
| Msa0639610 | Msa0846350 | 0.867919 | 9.590702e-66 | -8.615850e-47 |
| Msa0639610 | Msa0848960 | 0.828515 | 8.611749e-55 | -8.615850e-47 |
| Msa0639610 | Msa0858980 | 0.853637 | 2.094633e-61 | -8.615850e-47 |
| Msa0639610 | Msa0864070 | 0.832693 | 8.173554e-56 | -8.615850e-47 |
| Msa0639610 | Msa0865320 | 0.839445 | 1.578060e-57 | -8.615850e-47 |
| Msa0639610 | Msa0877250 | 0.832139 | 1.121165e-55 | -8.615850e-47 |
| Msa0639610 | Msa0885290 | 0.801725 | 7.864461e-49 | -8.615850e-47 |
| Msa0639610 | Msa0888370 | 0.817758 | 2.792317e-52 | -8.615850e-47 |
| Msa0639610 | Msa0888420 | 0.801886 | 7.287734e-49 | -8.615850e-47 |
| Msa0639610 | Msa0896080 | 0.838773 | 2.355725e-57 | -8.615850e-47 |
| Msa0639610 | Msa0899430 | 0.819153 | 1.348484e-52 | -8.615850e-47 |
| Msa0639610 | Msa0899450 | 0.811811 | 5.809079e-51 | -8.615850e-47 |
| Msa0639610 | Msa0907260 | 0.842715 | 2.183673e-58 | -8.615850e-47 |
| Msa0639610 | Msa0954910 | 0.807623 | 4.618334e-50 | -8.615850e-47 |
| Msa0639610 | Msa0956270 | 0.849262 | 3.619010e-60 | -8.615850e-47 |
| Msa0639610 | Msa0957860 | 0.807673 | 4.505909e-50 | -8.615850e-47 |
| Msa0639610 | Msa0957960 | 0.808201 | 3.479905e-50 | -8.615850e-47 |
| Msa0639610 | Msa0958550 | 0.819559 | 1.090130e-52 | -8.615850e-47 |
| Msa0639610 | Msa0966750 | 0.806861 | 6.695303e-50 | -8.615850e-47 |
| Msa0639610 | Msa0979410 | 0.840998 | 6.200366e-58 | -8.615850e-47 |
| Msa0639610 | Msa0979850 | 0.800896 | 1.162230e-48 | -8.615850e-47 |
| Msa0639610 | Msa0981370 | 0.844579 | 6.927141e-59 | -8.615850e-47 |
| Msa0639610 | Msa0986360 | 0.801039 | 1.086878e-48 | -8.615850e-47 |
| Msa0639610 | Msa0989060 | 0.861143 | 1.261709e-63 | -8.615850e-47 |
| Msa0639610 | Msa1016280 | 0.870969 | 9.763284e-67 | -8.615850e-47 |
| Msa0639610 | Msa1024240 | 0.811743 | 6.008753e-51 | -8.615850e-47 |
| Msa0639610 | Msa1025360 | 0.867863 | 9.996435e-66 | -8.615850e-47 |
| Msa0639610 | Msa1025370 | 0.848614 | 5.480174e-60 | -8.615850e-47 |
| Msa0639610 | Msa1044830 | 0.851958 | 6.320443e-61 | -8.615850e-47 |
| Msa0639610 | Msa1044840 | 0.867909 | 9.667385e-66 | -8.615850e-47 |
| Msa0639610 | Msa1060840 | 0.820173 | 7.888789e-53 | -8.615850e-47 |
| Msa0639610 | Msa1092990 | 0.860175 | 2.480910e-63 | -8.615850e-47 |
| Msa0639610 | Msa1100980 | 0.856959 | 2.260486e-62 | -8.615850e-47 |
| Msa0639610 | Msa1109440 | 0.839418 | 1.603787e-57 | -8.615850e-47 |
| Msa0639610 | Msa1114030 | 0.819743 | 9.893926e-53 | -8.615850e-47 |
| Msa0639610 | Msa1117150 | 0.803529 | 3.338473e-49 | -8.615850e-47 |
| Msa0639610 | Msa1120610 | 0.801989 | 6.939724e-49 | -8.615850e-47 |
| Msa0639610 | Msa1121200 | 0.847694 | 9.834224e-60 | -8.615850e-47 |
| Msa0639610 | Msa1121480 | 0.831497 | 1.614681e-55 | -8.615850e-47 |
| Msa0639610 | Msa1121490 | 0.817925 | 2.560843e-52 | -8.615850e-47 |
| Msa0639610 | Msa1135220 | 0.817309 | 3.525758e-52 | -8.615850e-47 |
| Msa0639610 | Msa1135740 | 0.834952 | 2.225994e-56 | -8.615850e-47 |
| Msa0639610 | Msa1136090 | 0.805936 | 1.049394e-49 | -8.615850e-47 |
| Msa0639610 | Msa1137690 | 0.808005 | 3.830517e-50 | -8.615850e-47 |
| Msa0639610 | Msa1146110 | 0.820263 | 7.524223e-53 | -8.615850e-47 |
| Msa0639610 | Msa1149360 | 0.804276 | 2.334245e-49 | -8.615850e-47 |
| Msa0639610 | Msa1150370 | 0.801481 | 8.821272e-49 | -8.615850e-47 |
| Msa0639610 | Msa1173920 | 0.817076 | 3.978140e-52 | -8.615850e-47 |
| Msa0639610 | Msa1187940 | 0.823556 | 1.300027e-53 | -8.615850e-47 |
| Msa0639610 | Msa1187950 | 0.860473 | 2.015897e-63 | -8.615850e-47 |
| Msa0639610 | Msa1192640 | 0.841759 | 3.911638e-58 | -8.615850e-47 |
| Msa0639610 | Msa1230430 | 0.802024 | 6.827503e-49 | -8.615850e-47 |
| Msa0639610 | Msa1246880 | 0.814873 | 1.234443e-51 | -8.615850e-47 |
| Msa0639610 | Msa1248300 | 0.803890 | 2.808933e-49 | -8.615850e-47 |
| Msa0639610 | Msa1248310 | 0.827276 | 1.710953e-54 | -8.615850e-47 |
| Msa0639610 | Msa1253000 | 0.809759 | 1.614616e-50 | -8.615850e-47 |
| Msa0639610 | Msa1269670 | 0.861390 | 1.061122e-63 | -8.615850e-47 |
| Msa0639610 | Msa1270230 | 0.856123 | 3.979715e-62 | -8.615850e-47 |
| Msa0639610 | Msa1270240 | 0.839722 | 1.337100e-57 | -8.615850e-47 |
| Msa0639610 | Msa1270270 | 0.833090 | 6.511056e-56 | -8.615850e-47 |
| Msa0639610 | Msa1273230 | 0.812264 | 4.626733e-51 | -8.615850e-47 |
| Msa0639610 | Msa1283330 | 0.886419 | 3.476188e-72 | -8.615850e-47 |
| Msa0639610 | Msa1284680 | 0.808680 | 2.749981e-50 | -8.615850e-47 |
| Msa0639610 | Msa1285930 | 0.863530 | 2.330313e-64 | -8.615850e-47 |
| Msa0639610 | Msa1287800 | 0.851932 | 6.428456e-61 | -8.615850e-47 |
| Msa0639610 | Msa1287810 | 0.865332 | 6.377165e-65 | -8.615850e-47 |
| Msa0639610 | Msa1288560 | 0.822602 | 2.170244e-53 | -8.615850e-47 |
| Msa0639610 | Msa1289420 | 0.827923 | 1.196359e-54 | -8.615850e-47 |
| Msa0639610 | Msa1289430 | 0.821592 | 3.720029e-53 | -8.615850e-47 |
| Msa0639610 | Msa1297210 | 0.801583 | 8.406683e-49 | -8.615850e-47 |
| Msa0639610 | Msa1307890 | 0.824940 | 6.145343e-54 | -8.615850e-47 |
| Msa0639610 | Msa1310120 | 0.810490 | 1.123339e-50 | -8.615850e-47 |
| Msa0639610 | Msa1320300 | 0.826516 | 2.599747e-54 | -8.615850e-47 |
| Msa0639610 | Msa1340590 | 0.833206 | 6.092009e-56 | -8.615850e-47 |
| Msa0639610 | Msa1344520 | 0.812850 | 3.444349e-51 | -8.615850e-47 |
| Msa0639610 | Msa1369430 | 0.835647 | 1.485554e-56 | -8.615850e-47 |
| Msa0639610 | Msa1382690 | 0.830446 | 2.923643e-55 | -8.615850e-47 |
| Msa0639610 | Msa1382700 | 0.806450 | 8.178468e-50 | -8.615850e-47 |
| Msa0639610 | Msa1386330 | 0.820387 | 7.044730e-53 | -8.615850e-47 |
| Msa0639610 | Msa1397580 | 0.829497 | 4.980797e-55 | -8.615850e-47 |
| Msa0639610 | Msa1397860 | 0.810604 | 1.061455e-50 | -8.615850e-47 |
| Msa0639610 | Msa1400720 | 0.800775 | 1.230165e-48 | -8.615850e-47 |
| Msa0639610 | Msa1402790 | 0.861489 | 9.901391e-64 | -8.615850e-47 |
| Msa0639610 | Msa1404000 | 0.852698 | 3.891245e-61 | -8.615850e-47 |
| Msa0639610 | Msa1408780 | 0.809154 | 2.177252e-50 | -8.615850e-47 |
| Msa0639610 | Msa1410680 | 0.800754 | 1.242746e-48 | -8.615850e-47 |
| Msa0639610 | Msa1415310 | 0.837787 | 4.228848e-57 | -8.615850e-47 |
| Msa0639610 | Msa1422180 | 0.877823 | 4.614187e-69 | -8.615850e-47 |
| Msa0639610 | Msa1433120 | 0.853419 | 2.419956e-61 | -8.615850e-47 |
| Msa0123810 | Msa0639610 | 0.814525 | 1.473880e-51 | -8.615850e-47 |
| Msa0142220 | Msa0639610 | 0.848207 | 7.099029e-60 | -8.615850e-47 |
| Msa0145750 | Msa0639610 | 0.805357 | 1.388288e-49 | -8.615850e-47 |
| Msa0198910 | Msa0639610 | 0.800297 | 1.539857e-48 | -8.615850e-47 |
| Msa0200000 | Msa0639610 | 0.817431 | 3.308801e-52 | -8.615850e-47 |
| Msa0208090 | Msa0639610 | 0.815153 | 1.069648e-51 | -8.615850e-47 |
| Msa0227480 | Msa0639610 | 0.867888 | 9.818879e-66 | -8.615850e-47 |
| Msa0231000 | Msa0639610 | 0.808524 | 2.968222e-50 | -8.615850e-47 |
| Msa0232850 | Msa0639610 | 0.859237 | 4.752769e-63 | -8.615850e-47 |
| Msa0235140 | Msa0639610 | 0.809884 | 1.517086e-50 | -8.615850e-47 |
| Msa0365500 | Msa0639610 | 0.809464 | 1.867974e-50 | -8.615850e-47 |
| Msa0378360 | Msa0639610 | 0.802161 | 6.396751e-49 | -8.615850e-47 |
| Msa0384800 | Msa0639610 | 0.860179 | 2.473639e-63 | -8.615850e-47 |
| Msa0384890 | Msa0639610 | 0.842577 | 2.375117e-58 | -8.615850e-47 |
| Msa0390070 | Msa0639610 | 0.842590 | 2.356643e-58 | -8.615850e-47 |
| Msa0391180 | Msa0639610 | 0.806053 | 9.914577e-50 | -8.615850e-47 |
| Msa0402290 | Msa0639610 | 0.807067 | 6.056838e-50 | -8.615850e-47 |
| Msa0407750 | Msa0639610 | 0.834422 | 3.025036e-56 | -8.615850e-47 |
| Msa0414410 | Msa0639610 | 0.835165 | 1.967087e-56 | -8.615850e-47 |
| Msa0414420 | Msa0639610 | 0.860076 | 2.658358e-63 | -8.615850e-47 |
| Msa0419980 | Msa0639610 | 0.806976 | 6.332201e-50 | -8.615850e-47 |
| Msa0423020 | Msa0639610 | 0.800787 | 1.223579e-48 | -8.615850e-47 |
| Msa0427710 | Msa0639610 | 0.808121 | 3.617799e-50 | -8.615850e-47 |
| Msa0428000 | Msa0639610 | 0.803118 | 4.061411e-49 | -8.615850e-47 |
| Msa0429880 | Msa0639610 | 0.800396 | 1.469699e-48 | -8.615850e-47 |
| Msa0435230 | Msa0639610 | 0.844424 | 7.627968e-59 | -8.615850e-47 |
| Msa0436780 | Msa0639610 | 0.835084 | 2.061851e-56 | -8.615850e-47 |
| Msa0436800 | Msa0639610 | 0.841138 | 5.698920e-58 | -8.615850e-47 |
| Msa0438620 | Msa0639610 | 0.827582 | 1.444738e-54 | -8.615850e-47 |
| Msa0450000 | Msa0639610 | 0.874620 | 5.857632e-68 | -8.615850e-47 |
| Msa0450570 | Msa0639610 | 0.836040 | 1.181438e-56 | -8.615850e-47 |
| Msa0451730 | Msa0639610 | 0.803806 | 2.923839e-49 | -8.615850e-47 |
| Msa0452900 | Msa0639610 | 0.870177 | 1.777343e-66 | -8.615850e-47 |
| Msa0453120 | Msa0639610 | 0.836664 | 8.197186e-57 | -8.615850e-47 |
| Msa0454910 | Msa0639610 | 0.808733 | 2.678239e-50 | -8.615850e-47 |
| Msa0459170 | Msa0639610 | 0.814358 | 1.604482e-51 | -8.615850e-47 |
| Msa0479340 | Msa0639610 | 0.845932 | 2.983084e-59 | -8.615850e-47 |
| Msa0251320 | Msa0639610 | 0.810518 | 1.107835e-50 | -8.615850e-47 |
| Msa0251640 | Msa0639610 | 0.804549 | 2.047972e-49 | -8.615850e-47 |
| Msa0267000 | Msa0639610 | 0.847496 | 1.114476e-59 | -8.615850e-47 |
| Msa0267010 | Msa0639610 | 0.860040 | 2.724801e-63 | -8.615850e-47 |
| Msa0270520 | Msa0639610 | 0.843970 | 1.009430e-58 | -8.615850e-47 |
| Msa0304170 | Msa0639610 | 0.803448 | 3.468734e-49 | -8.615850e-47 |
| Msa0306460 | Msa0639610 | 0.823659 | 1.229827e-53 | -8.615850e-47 |
| Msa0311750 | Msa0639610 | 0.813783 | 2.148546e-51 | -8.615850e-47 |
| Msa0342240 | Msa0639610 | 0.839426 | 1.595954e-57 | -8.615850e-47 |
| Msa0349360 | Msa0639610 | 0.813773 | 2.159631e-51 | -8.615850e-47 |
| Msa0355220 | Msa0639610 | 0.808893 | 2.475766e-50 | -8.615850e-47 |
| Msa0360510 | Msa0639610 | 0.853573 | 2.185975e-61 | -8.615850e-47 |
| Msa0491590 | Msa0639610 | 0.835651 | 1.482319e-56 | -8.615850e-47 |
| Msa0502760 | Msa0639610 | 0.814694 | 1.351866e-51 | -8.615850e-47 |
| Msa0506270 | Msa0639610 | 0.846776 | 1.755815e-59 | -8.615850e-47 |
| Msa0518540 | Msa0639610 | 0.809466 | 1.866055e-50 | -8.615850e-47 |
| Msa0564890 | Msa0639610 | 0.844488 | 7.329369e-59 | -8.615850e-47 |
| Msa0575010 | Msa0639610 | 0.838276 | 3.166692e-57 | -8.615850e-47 |
| Msa0596150 | Msa0639610 | 0.812133 | 4.942315e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 102 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTGTTCATTGCCAATTT+TGG | 0.185863 | 4_3:+36131358 | Msa0639610:CDS |
| ATCTTCACCTGCGGAGATTT+TGG | 0.190910 | 4_3:+36129317 | Msa0639610:five_prime_UTR |
| GAAGAAAAGGTCTCACAAAT+TGG | 0.245864 | 4_3:-36128986 | None:intergenic |
| CCGATGCACAAGTTGGGTTT+GGG | 0.253234 | 4_3:-36129074 | None:intergenic |
| TTGATGCCAGTTTCAACTTT+TGG | 0.253594 | 4_3:+36129488 | Msa0639610:five_prime_UTR |
| CCGGATTCCTATGCCAAAAT+TGG | 0.259086 | 4_3:-36131371 | None:intergenic |
| TGATTGGTTATTGTGTATTT+AGG | 0.283952 | 4_3:+36130892 | Msa0639610:five_prime_UTR |
| GCATAGGAATCCGGGGATTA+AGG | 0.285926 | 4_3:+36131380 | Msa0639610:CDS |
| TTCCAATCCTTGAAGCTATA+AGG | 0.288973 | 4_3:+36129626 | Msa0639610:five_prime_UTR |
| CGATGAAGAATTTGAAGATT+TGG | 0.290909 | 4_3:+36132575 | Msa0639610:CDS |
| CCAGAGAAGGATTTGCGATT+TGG | 0.301092 | 4_3:-36129032 | None:intergenic |
| ATTGTTCAAAATAAAATGTT+TGG | 0.301710 | 4_3:-36132717 | None:intergenic |
| CCCGATGCACAAGTTGGGTT+TGG | 0.345271 | 4_3:-36129075 | None:intergenic |
| TCAAGTACCTTATAGCTTCA+AGG | 0.370003 | 4_3:-36129633 | None:intergenic |
| CTAAGAAGTTGATGCTTCCT+TGG | 0.378217 | 4_3:-36130818 | None:intergenic |
| TGCATCGGGGTATCACAAAT+TGG | 0.379449 | 4_3:+36129089 | Msa0639610:five_prime_UTR |
| TGTGCACAGTTCTAAGACTT+TGG | 0.379846 | 4_3:+36131322 | Msa0639610:CDS |
| ATCATAAACTTCAATGTGAT+TGG | 0.383280 | 4_3:+36130127 | Msa0639610:five_prime_UTR |
| AGCACACCGTGAATGAATTA+AGG | 0.389860 | 4_3:+36131055 | Msa0639610:five_prime_UTR |
| TTGAATAACTTACGTATTTG+CGG | 0.390930 | 4_3:+36131173 | Msa0639610:five_prime_UTR |
| AATGGTGAACTTTCATAGTT+CGG | 0.395337 | 4_3:+36129528 | Msa0639610:five_prime_UTR |
| ATTGTTAGCATCATCTTCAT+AGG | 0.401786 | 4_3:+36129717 | Msa0639610:five_prime_UTR |
| CCAAATCGCAAATCCTTCTC+TGG | 0.403134 | 4_3:+36129032 | Msa0639610:five_prime_UTR |
| TGCGTTCCAAAAGTTGAAAC+TGG | 0.408853 | 4_3:-36129494 | None:intergenic |
| TACCTTATAGCTTCAAGGAT+TGG | 0.414047 | 4_3:-36129628 | None:intergenic |
| CCATGCCAGTATTTCATGTA+AGG | 0.416554 | 4_3:-36130151 | None:intergenic |
| GCTAAATTATACAAGGTGAT+TGG | 0.416717 | 4_3:+36130876 | Msa0639610:five_prime_UTR |
| AAAGGTATCTTTGATGCCTC+TGG | 0.417694 | 4_3:+36129993 | Msa0639610:five_prime_UTR |
| AGTAATAGCCTTATCACTTA+AGG | 0.419052 | 4_3:+36130175 | Msa0639610:five_prime_UTR |
| TTATTGTGTATTTAGGTAGT+TGG | 0.425627 | 4_3:+36130899 | Msa0639610:five_prime_UTR |
| CCAAACCCAACTTGTGCATC+GGG | 0.426305 | 4_3:+36129075 | Msa0639610:five_prime_UTR |
| AAGAAAAGGTCTCACAAATT+GGG | 0.436864 | 4_3:-36128985 | None:intergenic |
| CAACATTACCAAGACATTAG+AGG | 0.445603 | 4_3:-36129388 | None:intergenic |
| AAATCATGGCGTAAAGGTGC+TGG | 0.455934 | 4_3:-36130074 | None:intergenic |
| TTGGACCTTACATGAAATAC+TGG | 0.459488 | 4_3:+36130146 | Msa0639610:five_prime_UTR |
| TTATTTAAAGAGAAAGTTGT+TGG | 0.460282 | 4_3:+36129775 | Msa0639610:five_prime_UTR |
| CTAAGACTTTGGACAATGGC+TGG | 0.463856 | 4_3:+36131333 | Msa0639610:CDS |
| CCTTTCTCTGATCGAAGAAA+AGG | 0.464456 | 4_3:-36128999 | None:intergenic |
| GTACTTGAATTTGTTGAGGT+TGG | 0.465391 | 4_3:+36129648 | Msa0639610:five_prime_UTR |
| CCCAAACCCAACTTGTGCAT+CGG | 0.474103 | 4_3:+36129074 | Msa0639610:five_prime_UTR |
| CCAGTACCTTAATTCATTCA+CGG | 0.474312 | 4_3:-36131061 | None:intergenic |
| ACTACATATCGACCTTTATG+TGG | 0.489683 | 4_3:+36130996 | Msa0639610:five_prime_UTR |
| CTTCGCTGCCTCTAATGTCT+TGG | 0.502486 | 4_3:+36129380 | Msa0639610:five_prime_UTR |
| CTGGAACTGTGCAGACGGAA+TGG | 0.506097 | 4_3:-36130055 | None:intergenic |
| GGTAATAGAATCAGAAAAGA+TGG | 0.506693 | 4_3:-36129125 | None:intergenic |
| CTACCGAGCAATTAAAATCA+TGG | 0.507301 | 4_3:-36130088 | None:intergenic |
| TATTTAAAGAGAAAGTTGTT+GGG | 0.507708 | 4_3:+36129776 | Msa0639610:five_prime_UTR |
| TTGCAGGGTGTATCATATGA+AGG | 0.508801 | 4_3:+36130771 | Msa0639610:intron |
| GTCTCTTAAATTTATGTGTG+AGG | 0.509009 | 4_3:+36129430 | Msa0639610:five_prime_UTR |
| GAAGATTTGGAAGAACAAGA+TGG | 0.509950 | 4_3:+36132588 | Msa0639610:CDS |
| GATACCCCGATGCACAAGTT+GGG | 0.515093 | 4_3:-36129080 | None:intergenic |
| AAGTTGATGCTTCCTTGGAT+TGG | 0.518076 | 4_3:-36130813 | None:intergenic |
| AGGCAGCGAAGATGAAACTA+AGG | 0.520622 | 4_3:-36129368 | None:intergenic |
| AGTCTTTCTGACGGCGAAGA+CGG | 0.521744 | 4_3:-36129256 | None:intergenic |
| TATGCACACCTTAAGTGATA+AGG | 0.528786 | 4_3:-36130183 | None:intergenic |
| CAATTAAAATCATGGCGTAA+AGG | 0.529424 | 4_3:-36130080 | None:intergenic |
| TGAAACTGGCATCAATATGT+TGG | 0.530049 | 4_3:-36129480 | None:intergenic |
| ATAACTTACGTATTTGCGGT+TGG | 0.530424 | 4_3:+36131177 | Msa0639610:five_prime_UTR |
| GCCAAGATTACCTTAATCCC+CGG | 0.531165 | 4_3:-36131390 | None:intergenic |
| GAATGGGCAGCCTCACGTAC+AGG | 0.531478 | 4_3:-36130038 | None:intergenic |
| AACTATTTAAATTGATCACA+TGG | 0.534115 | 4_3:-36129858 | None:intergenic |
| CCGTGAATGAATTAAGGTAC+TGG | 0.537187 | 4_3:+36131061 | Msa0639610:five_prime_UTR |
| CCAAACAAAAGCCCACATAA+AGG | 0.537652 | 4_3:-36131008 | None:intergenic |
| ACTTACGTATTTGCGGTTGG+AGG | 0.552139 | 4_3:+36131180 | Msa0639610:five_prime_UTR |
| CGATGCACAAGTTGGGTTTG+GGG | 0.553427 | 4_3:-36129073 | None:intergenic |
| TAAGGTACTTGAATTTGTTG+AGG | 0.555009 | 4_3:+36129644 | Msa0639610:five_prime_UTR |
| AAACTCTCCAAAATCTCCGC+AGG | 0.559851 | 4_3:-36129324 | None:intergenic |
| CTTACGTATTTGCGGTTGGA+GGG | 0.560949 | 4_3:+36131181 | Msa0639610:five_prime_UTR |
| GAAACTGGCATCAATATGTT+GGG | 0.561826 | 4_3:-36129479 | None:intergenic |
| GAGTCTCATGACTGAACCAA+TGG | 0.563388 | 4_3:+36129804 | Msa0639610:five_prime_UTR |
| ATTTGGAAGAACAAGATGGA+TGG | 0.564009 | 4_3:+36132592 | Msa0639610:CDS |
| GAAACTAAGGAAATCTCTGA+TGG | 0.564035 | 4_3:-36129355 | None:intergenic |
| CATGACTGAACCAATGGGAC+GGG | 0.567715 | 4_3:+36129810 | Msa0639610:five_prime_UTR |
| AGTCTCATGACTGAACCAAT+GGG | 0.577097 | 4_3:+36129805 | Msa0639610:five_prime_UTR |
| TGATACCCCGATGCACAAGT+TGG | 0.579066 | 4_3:-36129081 | None:intergenic |
| AAGGTCTCACAAATTGGGAG+AGG | 0.582294 | 4_3:-36128980 | None:intergenic |
| AAACAAGGGTGATTGGTGAA+AGG | 0.585815 | 4_3:+36129975 | Msa0639610:five_prime_UTR |
| TTACGAAGCTAAATTATACA+AGG | 0.586841 | 4_3:+36130869 | Msa0639610:five_prime_UTR |
| TTAAAGAGAAAGTTGTTGGG+AGG | 0.590266 | 4_3:+36129779 | Msa0639610:five_prime_UTR |
| TCTTCATAGGAAAGTGCTCT+CGG | 0.599879 | 4_3:+36129730 | Msa0639610:five_prime_UTR |
| TGGAACTGTGCAGACGGAAT+GGG | 0.600408 | 4_3:-36130054 | None:intergenic |
| AGGTGCTGGAACTGTGCAGA+CGG | 0.604323 | 4_3:-36130060 | None:intergenic |
| AGGAAGTTGAATTGTGCAGA+AGG | 0.605502 | 4_3:-36130018 | None:intergenic |
| CTCACAAATTGGGAGAGGAA+AGG | 0.606715 | 4_3:-36128975 | None:intergenic |
| TCATGACTGAACCAATGGGA+CGG | 0.616900 | 4_3:+36129809 | Msa0639610:five_prime_UTR |
| AGCTGAAGTAGGTTTGAGCG+AGG | 0.616904 | 4_3:-36129158 | None:intergenic |
| AATTGAAACTATACGATGAG+AGG | 0.617331 | 4_3:-36129697 | None:intergenic |
| CTACATATCGACCTTTATGT+GGG | 0.624406 | 4_3:+36130997 | Msa0639610:five_prime_UTR |
| GGCGGGGTCTCAGCTGAAGT+AGG | 0.624525 | 4_3:-36129169 | None:intergenic |
| GCTGAAGTAGGTTTGAGCGA+GGG | 0.640368 | 4_3:-36129157 | None:intergenic |
| CCTTACATGAAATACTGGCA+TGG | 0.644799 | 4_3:+36130151 | Msa0639610:five_prime_UTR |
| AATTCAACTTCCTGTACGTG+AGG | 0.646285 | 4_3:+36130028 | Msa0639610:five_prime_UTR |
| TTTGAGCGAGGGTTTCGCGA+GGG | 0.653225 | 4_3:-36129146 | None:intergenic |
| AAGTAAATAAAAGAATCTGA+CGG | 0.660524 | 4_3:-36129884 | None:intergenic |
| AGTTCTAAGACTTTGGACAA+TGG | 0.662043 | 4_3:+36131329 | Msa0639610:CDS |
| TACTAGCTAGAACCAATCCA+AGG | 0.662484 | 4_3:+36130801 | Msa0639610:five_prime_UTR |
| CAAAGACGAAGTCTTTCTGA+CGG | 0.663736 | 4_3:-36129265 | None:intergenic |
| GTGCGTTTGATCTTCACCTG+CGG | 0.675779 | 4_3:+36129308 | Msa0639610:five_prime_UTR |
| GTTTGAGCGAGGGTTTCGCG+AGG | 0.681585 | 4_3:-36129147 | None:intergenic |
| AATTGTGCAGAAGGAACCAG+AGG | 0.686590 | 4_3:-36130009 | None:intergenic |
| AGACTTTGGACAATGGCTGG+AGG | 0.691826 | 4_3:+36131336 | Msa0639610:CDS |
| CAAACCCAACTTGTGCATCG+GGG | 0.737544 | 4_3:+36129076 | Msa0639610:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATAATTTTTTAATTTA+AGG | + | chr4_3:36132749-36132768 | Msa0639610:three_prime_UTR | 0.0% |
| !! | CAAAAAAATAGTAAAAAAAA+GGG | - | chr4_3:36129577-36129596 | None:intergenic | 10.0% |
| !! | ACAAAAAAATAGTAAAAAAA+AGG | - | chr4_3:36129578-36129597 | None:intergenic | 10.0% |
| !!! | TTTTTTTTACTATTTTTTTG+TGG | + | chr4_3:36129577-36129596 | Msa0639610:five_prime_UTR | 10.0% |
| !! | AATTTGAAGAAAAAATAATT+AGG | + | chr4_3:36132385-36132404 | Msa0639610:intron | 10.0% |
| !! | ATTTGAAGAAAAAATAATTA+GGG | + | chr4_3:36132386-36132405 | Msa0639610:intron | 10.0% |
| !!! | AAAATTAACTCAAATTTTCA+AGG | - | chr4_3:36129757-36129776 | None:intergenic | 15.0% |
| !! | ATTCAAAAAAAAAAATCGTT+GGG | + | chr4_3:36130503-36130522 | Msa0639610:intron | 15.0% |
| !! | CTGAAATAATACAATAATAA+AGG | - | chr4_3:36131488-36131507 | None:intergenic | 15.0% |
| !! | ATTGTTCAAAATAAAATGTT+TGG | - | chr4_3:36132720-36132739 | None:intergenic | 15.0% |
| !! | AAAAAAATTATAACCAGAGA+AGG | - | chr4_3:36129048-36129067 | None:intergenic | 20.0% |
| !! | TTATTTAAAGAGAAAGTTGT+TGG | + | chr4_3:36129775-36129794 | Msa0639610:five_prime_UTR | 20.0% |
| !! | TATTTAAAGAGAAAGTTGTT+GGG | + | chr4_3:36129776-36129795 | Msa0639610:five_prime_UTR | 20.0% |
| !! | AACTATTTAAATTGATCACA+TGG | - | chr4_3:36129861-36129880 | None:intergenic | 20.0% |
| !! | AAGTAAATAAAAGAATCTGA+CGG | - | chr4_3:36129887-36129906 | None:intergenic | 20.0% |
| !!! | ACTTTTTTTTTGTCATTTTG+TGG | + | chr4_3:36129903-36129922 | Msa0639610:five_prime_UTR | 20.0% |
| !! | ATATTTGTCATTGTTAGAAT+TGG | + | chr4_3:36130260-36130279 | Msa0639610:intron | 20.0% |
| !! | GATTCAAAAAAAAAAATCGT+TGG | + | chr4_3:36130502-36130521 | Msa0639610:intron | 20.0% |
| !!! | AATGCAACTATTTTAATTCT+TGG | - | chr4_3:36130576-36130595 | None:intergenic | 20.0% |
| !!! | TATGAAGACATAACAAATTT+TGG | + | chr4_3:36130719-36130738 | Msa0639610:intron | 20.0% |
| !!! | GTTAGTTATTTAATGAGTTT+TGG | + | chr4_3:36131808-36131827 | Msa0639610:intron | 20.0% |
| !!! | TTGATAGTTGTTTTTTTACA+AGG | + | chr4_3:36132487-36132506 | Msa0639610:intron | 20.0% |
| !!! | TGATAGTTGTTTTTTTACAA+GGG | + | chr4_3:36132488-36132507 | Msa0639610:intron | 20.0% |
| !!! | TTTTATTTTAAAGACGTTGA+TGG | + | chr4_3:36132633-36132652 | Msa0639610:CDS | 20.0% |
| ! | ATCATAAACTTCAATGTGAT+TGG | + | chr4_3:36130127-36130146 | Msa0639610:five_prime_UTR | 25.0% |
| ! | TATGAACTTGAAGAAATTGA+GGG | - | chr4_3:36130396-36130415 | None:intergenic | 25.0% |
| ! | ATATGAACTTGAAGAAATTG+AGG | - | chr4_3:36130397-36130416 | None:intergenic | 25.0% |
| !! | TCAATTTCTTCAAGTTCATA+TGG | + | chr4_3:36130396-36130415 | Msa0639610:intron | 25.0% |
| !! | CAATTTCTTCAAGTTCATAT+GGG | + | chr4_3:36130397-36130416 | Msa0639610:intron | 25.0% |
| !! | TTAATTCTTGGTAATTGACT+AGG | - | chr4_3:36130564-36130583 | None:intergenic | 25.0% |
| ! | AAAATAGTTGCATTCTGAAT+TGG | + | chr4_3:36130582-36130601 | Msa0639610:intron | 25.0% |
| ! | AATGGTTTATACATATGGAA+AGG | - | chr4_3:36130609-36130628 | None:intergenic | 25.0% |
| !! | TCCATATGTATAAACCATTT+TGG | + | chr4_3:36130610-36130629 | Msa0639610:intron | 25.0% |
| ! | ACCAAAATGGTTTATACATA+TGG | - | chr4_3:36130614-36130633 | None:intergenic | 25.0% |
| !!! | TATGTATAAACCATTTTGGT+TGG | + | chr4_3:36130614-36130633 | Msa0639610:intron | 25.0% |
| !!! | ATGTATAAACCATTTTGGTT+GGG | + | chr4_3:36130615-36130634 | Msa0639610:intron | 25.0% |
| ! | ATTGAGATTGTAATATTGTG+TGG | + | chr4_3:36130744-36130763 | Msa0639610:intron | 25.0% |
| ! | TTACGAAGCTAAATTATACA+AGG | + | chr4_3:36130869-36130888 | Msa0639610:five_prime_UTR | 25.0% |
| !! | TGATTGGTTATTGTGTATTT+AGG | + | chr4_3:36130892-36130911 | Msa0639610:five_prime_UTR | 25.0% |
| ! | TTATTGTGTATTTAGGTAGT+TGG | + | chr4_3:36130899-36130918 | Msa0639610:five_prime_UTR | 25.0% |
| !!! | TTTTTTGTCTAACGTAACTT+TGG | + | chr4_3:36131116-36131135 | Msa0639610:five_prime_UTR | 25.0% |
| ! | TTGAATAACTTACGTATTTG+CGG | + | chr4_3:36131173-36131192 | Msa0639610:five_prime_UTR | 25.0% |
| ! | AAGAACACATGAGTATAATT+GGG | - | chr4_3:36131277-36131296 | None:intergenic | 25.0% |
| ! | TAAGAACACATGAGTATAAT+TGG | - | chr4_3:36131278-36131297 | None:intergenic | 25.0% |
| ! | AGATACTAAGATGAAAAGTA+AGG | - | chr4_3:36131449-36131468 | None:intergenic | 25.0% |
| !!! | GGTCTTTTGTTGTTAATTTT+TGG | + | chr4_3:36131853-36131872 | Msa0639610:intron | 25.0% |
| ! | AAAGAAAACACAATGCAATT+TGG | + | chr4_3:36132040-36132059 | Msa0639610:intron | 25.0% |
| !!! | TTTTTGATGACTTGATGTAT+TGG | + | chr4_3:36132298-36132317 | Msa0639610:intron | 25.0% |
| AAGAAAAGGTCTCACAAATT+GGG | - | chr4_3:36128988-36129007 | None:intergenic | 30.0% | |
| GGTAATAGAATCAGAAAAGA+TGG | - | chr4_3:36129128-36129147 | None:intergenic | 30.0% | |
| GTCTCTTAAATTTATGTGTG+AGG | + | chr4_3:36129430-36129449 | Msa0639610:five_prime_UTR | 30.0% | |
| AATGGTGAACTTTCATAGTT+CGG | + | chr4_3:36129528-36129547 | Msa0639610:five_prime_UTR | 30.0% | |
| !! | TAAGGTACTTGAATTTGTTG+AGG | + | chr4_3:36129644-36129663 | Msa0639610:five_prime_UTR | 30.0% |
| AATTGAAACTATACGATGAG+AGG | - | chr4_3:36129700-36129719 | None:intergenic | 30.0% | |
| ATTGTTAGCATCATCTTCAT+AGG | + | chr4_3:36129717-36129736 | Msa0639610:five_prime_UTR | 30.0% | |
| ACAACTGTGTTGAAAAAACA+AGG | + | chr4_3:36129960-36129979 | Msa0639610:five_prime_UTR | 30.0% | |
| CAACTGTGTTGAAAAAACAA+GGG | + | chr4_3:36129961-36129980 | Msa0639610:five_prime_UTR | 30.0% | |
| CAATTAAAATCATGGCGTAA+AGG | - | chr4_3:36130083-36130102 | None:intergenic | 30.0% | |
| !! | AGTAATAGCCTTATCACTTA+AGG | + | chr4_3:36130175-36130194 | Msa0639610:five_prime_UTR | 30.0% |
| ! | AAGCATGAACTCAATTTTTG+TGG | - | chr4_3:36130209-36130228 | None:intergenic | 30.0% |
| TAAATTAAGAAGACCTCACA+TGG | + | chr4_3:36130438-36130457 | Msa0639610:intron | 30.0% | |
| ! | ACTAGCTAAATAAGCATTGT+GGG | - | chr4_3:36130539-36130558 | None:intergenic | 30.0% |
| !!! | TGTATAAACCATTTTGGTTG+GGG | + | chr4_3:36130616-36130635 | Msa0639610:intron | 30.0% |
| ! | AATATTGTGTGGAATTTTGC+AGG | + | chr4_3:36130755-36130774 | Msa0639610:intron | 30.0% |
| ! | ATATTGTGTGGAATTTTGCA+GGG | + | chr4_3:36130756-36130775 | Msa0639610:intron | 30.0% |
| GCTAAATTATACAAGGTGAT+TGG | + | chr4_3:36130876-36130895 | Msa0639610:five_prime_UTR | 30.0% | |
| TATTCATGACTAATGGTTCA+TGG | - | chr4_3:36131543-36131562 | None:intergenic | 30.0% | |
| ! | GAAAGCATATTCATGACTAA+TGG | - | chr4_3:36131550-36131569 | None:intergenic | 30.0% |
| !!! | ATTTTTAGCTTGAAAACGAG+AGG | + | chr4_3:36131677-36131696 | Msa0639610:intron | 30.0% |
| ! | TGATTTTGTAGATTTGTACG+AGG | + | chr4_3:36131832-36131851 | Msa0639610:intron | 30.0% |
| !!! | TTTTTGGCTGATTTTTGCTT+TGG | + | chr4_3:36131869-36131888 | Msa0639610:intron | 30.0% |
| !! | TTTTGGCTGATTTTTGCTTT+GGG | + | chr4_3:36131870-36131889 | Msa0639610:intron | 30.0% |
| ACTAAGAAAGACACAATAAC+GGG | - | chr4_3:36131959-36131978 | None:intergenic | 30.0% | |
| CACTAAGAAAGACACAATAA+CGG | - | chr4_3:36131960-36131979 | None:intergenic | 30.0% | |
| !!! | AGTGGTGTTTTAACTTAACA+TGG | - | chr4_3:36132087-36132106 | None:intergenic | 30.0% |
| TGTTAAGTTAAAACACCACT+CGG | + | chr4_3:36132087-36132106 | Msa0639610:intron | 30.0% | |
| ! | AACTTTGATAACAACTCTTG+TGG | + | chr4_3:36132134-36132153 | Msa0639610:intron | 30.0% |
| CGATGAAGAATTTGAAGATT+TGG | + | chr4_3:36132575-36132594 | Msa0639610:CDS | 30.0% | |
| GAAGAAAAGGTCTCACAAAT+TGG | - | chr4_3:36128989-36129008 | None:intergenic | 35.0% | |
| ! | CTTTTCTTCGATCAGAGAAA+GGG | + | chr4_3:36129000-36129019 | Msa0639610:five_prime_UTR | 35.0% |
| GAAACTAAGGAAATCTCTGA+TGG | - | chr4_3:36129358-36129377 | None:intergenic | 35.0% | |
| CAACATTACCAAGACATTAG+AGG | - | chr4_3:36129391-36129410 | None:intergenic | 35.0% | |
| ! | TATGTGTGAGGATTTTTCTC+TGG | + | chr4_3:36129442-36129461 | Msa0639610:five_prime_UTR | 35.0% |
| GAAACTGGCATCAATATGTT+GGG | - | chr4_3:36129482-36129501 | None:intergenic | 35.0% | |
| TGAAACTGGCATCAATATGT+TGG | - | chr4_3:36129483-36129502 | None:intergenic | 35.0% | |
| ! | TTGATGCCAGTTTCAACTTT+TGG | + | chr4_3:36129488-36129507 | Msa0639610:five_prime_UTR | 35.0% |
| TTCCAATCCTTGAAGCTATA+AGG | + | chr4_3:36129626-36129645 | Msa0639610:five_prime_UTR | 35.0% | |
| TACCTTATAGCTTCAAGGAT+TGG | - | chr4_3:36129631-36129650 | None:intergenic | 35.0% | |
| TCAAGTACCTTATAGCTTCA+AGG | - | chr4_3:36129636-36129655 | None:intergenic | 35.0% | |
| !! | GTACTTGAATTTGTTGAGGT+TGG | + | chr4_3:36129648-36129667 | Msa0639610:five_prime_UTR | 35.0% |
| TTAAAGAGAAAGTTGTTGGG+AGG | + | chr4_3:36129779-36129798 | Msa0639610:five_prime_UTR | 35.0% | |
| !! | GGGTTTTTCTTAAGTTGTGA+AGG | + | chr4_3:36129830-36129849 | Msa0639610:five_prime_UTR | 35.0% |
| GTTGAAAAAACAAGGGTGAT+TGG | + | chr4_3:36129968-36129987 | Msa0639610:five_prime_UTR | 35.0% | |
| !!! | ACGCCATGATTTTAATTGCT+CGG | + | chr4_3:36130085-36130104 | Msa0639610:five_prime_UTR | 35.0% |
| CTACCGAGCAATTAAAATCA+TGG | - | chr4_3:36130091-36130110 | None:intergenic | 35.0% | |
| TTGGACCTTACATGAAATAC+TGG | + | chr4_3:36130146-36130165 | Msa0639610:five_prime_UTR | 35.0% | |
| TATGCACACCTTAAGTGATA+AGG | - | chr4_3:36130186-36130205 | None:intergenic | 35.0% | |
| AGTCCTCTCCATAAAAATTG+TGG | + | chr4_3:36130349-36130368 | Msa0639610:intron | 35.0% | |
| ! | GAACCACAATTTTTATGGAG+AGG | - | chr4_3:36130355-36130374 | None:intergenic | 35.0% |
| CTCCATAAAAATTGTGGTTC+TGG | + | chr4_3:36130355-36130374 | Msa0639610:intron | 35.0% | |
| ! | AGCCAGAACCACAATTTTTA+TGG | - | chr4_3:36130360-36130379 | None:intergenic | 35.0% |
| ! | CACTAGCTAAATAAGCATTG+TGG | - | chr4_3:36130540-36130559 | None:intergenic | 35.0% |
| ACTACATATCGACCTTTATG+TGG | + | chr4_3:36130996-36131015 | Msa0639610:five_prime_UTR | 35.0% | |
| CTACATATCGACCTTTATGT+GGG | + | chr4_3:36130997-36131016 | Msa0639610:five_prime_UTR | 35.0% | |
| CCAGTACCTTAATTCATTCA+CGG | - | chr4_3:36131064-36131083 | None:intergenic | 35.0% | |
| ATAACTTACGTATTTGCGGT+TGG | + | chr4_3:36131177-36131196 | Msa0639610:five_prime_UTR | 35.0% | |
| !! | AGTTCTAAGACTTTGGACAA+TGG | + | chr4_3:36131329-36131348 | Msa0639610:CDS | 35.0% |
| !! | TTCATTGCCAATTTTGGCAT+AGG | + | chr4_3:36131364-36131383 | Msa0639610:CDS | 35.0% |
| AAGCAAACATACAAGATCGA+AGG | - | chr4_3:36131418-36131437 | None:intergenic | 35.0% | |
| ATAGAGACTCTGTCAAAGTT+AGG | + | chr4_3:36131646-36131665 | Msa0639610:intron | 35.0% | |
| ! | TATTGGTTGTATAACTGCGT+TGG | + | chr4_3:36132315-36132334 | Msa0639610:intron | 35.0% |
| GAAGATTTGGAAGAACAAGA+TGG | + | chr4_3:36132588-36132607 | Msa0639610:CDS | 35.0% | |
| ATTTGGAAGAACAAGATGGA+TGG | + | chr4_3:36132592-36132611 | Msa0639610:CDS | 35.0% | |
| CCTTTCTCTGATCGAAGAAA+AGG | - | chr4_3:36129002-36129021 | None:intergenic | 40.0% | |
| ! | CCTTTTCTTCGATCAGAGAA+AGG | + | chr4_3:36128999-36129018 | Msa0639610:five_prime_UTR | 40.0% |
| ! | AACTGGAGTGAATTTGGTGA+GGG | - | chr4_3:36129193-36129212 | None:intergenic | 40.0% |
| ! | AAACTGGAGTGAATTTGGTG+AGG | - | chr4_3:36129194-36129213 | None:intergenic | 40.0% |
| CACCAAATTCACTCCAGTTT+CGG | + | chr4_3:36129194-36129213 | Msa0639610:intron | 40.0% | |
| AACCGAAACTGGAGTGAATT+TGG | - | chr4_3:36129199-36129218 | None:intergenic | 40.0% | |
| AATCGTGAAATTTGCGGGTT+TGG | - | chr4_3:36129236-36129255 | None:intergenic | 40.0% | |
| AGACGGAATCGTGAAATTTG+CGG | - | chr4_3:36129242-36129261 | None:intergenic | 40.0% | |
| CAAAGACGAAGTCTTTCTGA+CGG | - | chr4_3:36129268-36129287 | None:intergenic | 40.0% | |
| TGCGTTCCAAAAGTTGAAAC+TGG | - | chr4_3:36129497-36129516 | None:intergenic | 40.0% | |
| GAACGCAGACATTGCAAAAA+TGG | + | chr4_3:36129510-36129529 | Msa0639610:five_prime_UTR | 40.0% | |
| !! | TCTTCATAGGAAAGTGCTCT+CGG | + | chr4_3:36129730-36129749 | Msa0639610:five_prime_UTR | 40.0% |
| AGTCTCATGACTGAACCAAT+GGG | + | chr4_3:36129805-36129824 | Msa0639610:five_prime_UTR | 40.0% | |
| TTAAGAAAAACCCGTCCCAT+TGG | - | chr4_3:36129823-36129842 | None:intergenic | 40.0% | |
| AAACAAGGGTGATTGGTGAA+AGG | + | chr4_3:36129975-36129994 | Msa0639610:five_prime_UTR | 40.0% | |
| !! | AAAGGTATCTTTGATGCCTC+TGG | + | chr4_3:36129993-36130012 | Msa0639610:five_prime_UTR | 40.0% |
| AGGAAGTTGAATTGTGCAGA+AGG | - | chr4_3:36130021-36130040 | None:intergenic | 40.0% | |
| AATTCAACTTCCTGTACGTG+AGG | + | chr4_3:36130028-36130047 | Msa0639610:five_prime_UTR | 40.0% | |
| CCATGCCAGTATTTCATGTA+AGG | - | chr4_3:36130154-36130173 | None:intergenic | 40.0% | |
| CCTTACATGAAATACTGGCA+TGG | + | chr4_3:36130151-36130170 | Msa0639610:five_prime_UTR | 40.0% | |
| !! | AAAAATTGTGGTTCTGGCTG+TGG | + | chr4_3:36130361-36130380 | Msa0639610:intron | 40.0% |
| CTCTGACATATTTCCATGTG+AGG | - | chr4_3:36130454-36130473 | None:intergenic | 40.0% | |
| CTCACATGGAAATATGTCAG+AGG | + | chr4_3:36130452-36130471 | Msa0639610:intron | 40.0% | |
| CAATTGAACCCCAACCAAAA+TGG | - | chr4_3:36130627-36130646 | None:intergenic | 40.0% | |
| TTGCAGGGTGTATCATATGA+AGG | + | chr4_3:36130771-36130790 | Msa0639610:intron | 40.0% | |
| TACTAGCTAGAACCAATCCA+AGG | + | chr4_3:36130801-36130820 | Msa0639610:five_prime_UTR | 40.0% | |
| !! | AAGTTGATGCTTCCTTGGAT+TGG | - | chr4_3:36130816-36130835 | None:intergenic | 40.0% |
| !! | CTAAGAAGTTGATGCTTCCT+TGG | - | chr4_3:36130821-36130840 | None:intergenic | 40.0% |
| CCAAACAAAAGCCCACATAA+AGG | - | chr4_3:36131011-36131030 | None:intergenic | 40.0% | |
| ! | CCTTTATGTGGGCTTTTGTT+TGG | + | chr4_3:36131008-36131027 | Msa0639610:five_prime_UTR | 40.0% |
| AGCACACCGTGAATGAATTA+AGG | + | chr4_3:36131055-36131074 | Msa0639610:five_prime_UTR | 40.0% | |
| CCGTGAATGAATTAAGGTAC+TGG | + | chr4_3:36131061-36131080 | Msa0639610:five_prime_UTR | 40.0% | |
| !! | TGTGCACAGTTCTAAGACTT+TGG | + | chr4_3:36131322-36131341 | Msa0639610:CDS | 40.0% |
| !! | GTGCTGTTCATTGCCAATTT+TGG | + | chr4_3:36131358-36131377 | Msa0639610:CDS | 40.0% |
| !! | CCAATTTTGGCATAGGAATC+CGG | + | chr4_3:36131371-36131390 | Msa0639610:CDS | 40.0% |
| !! | CAATTTTGGCATAGGAATCC+GGG | + | chr4_3:36131372-36131391 | Msa0639610:CDS | 40.0% |
| !! | AATTTTGGCATAGGAATCCG+GGG | + | chr4_3:36131373-36131392 | Msa0639610:CDS | 40.0% |
| AAACGAGAGGTTCTCCTATT+TGG | + | chr4_3:36131690-36131709 | Msa0639610:intron | 40.0% | |
| AACGAGAGGTTCTCCTATTT+GGG | + | chr4_3:36131691-36131710 | Msa0639610:intron | 40.0% | |
| !! | AAAGAGTATCGTCCCCAAAT+AGG | - | chr4_3:36131707-36131726 | None:intergenic | 40.0% |
| TTCCAGTTGCAATCACTTTG+AGG | + | chr4_3:36131764-36131783 | Msa0639610:intron | 40.0% | |
| TGGTTGTGGTGTTTGTAACA+GGG | + | chr4_3:36131910-36131929 | Msa0639610:intron | 40.0% | |
| AAGTTAAAACACCACTCGGT+TGG | + | chr4_3:36132091-36132110 | Msa0639610:intron | 40.0% | |
| AGTCAATGCGATGTCTAGTA+GGG | + | chr4_3:36132443-36132462 | Msa0639610:intron | 40.0% | |
| CTCACAAATTGGGAGAGGAA+AGG | - | chr4_3:36128978-36128997 | None:intergenic | 45.0% | |
| AAGGTCTCACAAATTGGGAG+AGG | - | chr4_3:36128983-36129002 | None:intergenic | 45.0% | |
| CCAGAGAAGGATTTGCGATT+TGG | - | chr4_3:36129035-36129054 | None:intergenic | 45.0% | |
| CCAAATCGCAAATCCTTCTC+TGG | + | chr4_3:36129032-36129051 | Msa0639610:five_prime_UTR | 45.0% | |
| ! | TGCATCGGGGTATCACAAAT+TGG | + | chr4_3:36129089-36129108 | Msa0639610:five_prime_UTR | 45.0% |
| ATTTGCGGGTTTGGCAATTG+TGG | - | chr4_3:36129227-36129246 | None:intergenic | 45.0% | |
| GACGGAATCGTGAAATTTGC+GGG | - | chr4_3:36129241-36129260 | None:intergenic | 45.0% | |
| ! | ATCTTCACCTGCGGAGATTT+TGG | + | chr4_3:36129317-36129336 | Msa0639610:five_prime_UTR | 45.0% |
| AAACTCTCCAAAATCTCCGC+AGG | - | chr4_3:36129327-36129346 | None:intergenic | 45.0% | |
| AGGCAGCGAAGATGAAACTA+AGG | - | chr4_3:36129371-36129390 | None:intergenic | 45.0% | |
| GAGTCTCATGACTGAACCAA+TGG | + | chr4_3:36129804-36129823 | Msa0639610:five_prime_UTR | 45.0% | |
| TCATGACTGAACCAATGGGA+CGG | + | chr4_3:36129809-36129828 | Msa0639610:five_prime_UTR | 45.0% | |
| AATTGTGCAGAAGGAACCAG+AGG | - | chr4_3:36130012-36130031 | None:intergenic | 45.0% | |
| ! | AAATCATGGCGTAAAGGTGC+TGG | - | chr4_3:36130077-36130096 | None:intergenic | 45.0% |
| ACTTACGTATTTGCGGTTGG+AGG | + | chr4_3:36131180-36131199 | Msa0639610:five_prime_UTR | 45.0% | |
| CTTACGTATTTGCGGTTGGA+GGG | + | chr4_3:36131181-36131200 | Msa0639610:five_prime_UTR | 45.0% | |
| CTAAGACTTTGGACAATGGC+TGG | + | chr4_3:36131333-36131352 | Msa0639610:CDS | 45.0% | |
| CCGGATTCCTATGCCAAAAT+TGG | - | chr4_3:36131374-36131393 | None:intergenic | 45.0% | |
| TCCGGGGATTAAGGTAATCT+TGG | + | chr4_3:36131389-36131408 | Msa0639610:intron | 45.0% | |
| GCCAAGATTACCTTAATCCC+CGG | - | chr4_3:36131393-36131412 | None:intergenic | 45.0% | |
| ACGAGAGGTTCTCCTATTTG+GGG | + | chr4_3:36131692-36131711 | Msa0639610:intron | 45.0% | |
| CACCTCAAAGTGATTGCAAC+TGG | - | chr4_3:36131769-36131788 | None:intergenic | 45.0% | |
| TACAAACACCACAACCAGCA+AGG | - | chr4_3:36131907-36131926 | None:intergenic | 45.0% | |
| CTGGTTGTGGTGTTTGTAAC+AGG | + | chr4_3:36131909-36131928 | Msa0639610:intron | 45.0% | |
| TGTAACAGGGTCTGTTTGTG+CGG | + | chr4_3:36131923-36131942 | Msa0639610:intron | 45.0% | |
| ! | ACACAATAACGGGATGTAGC+AGG | - | chr4_3:36131949-36131968 | None:intergenic | 45.0% |
| TCTCTATCAATCCAACCGAG+TGG | - | chr4_3:36132105-36132124 | None:intergenic | 45.0% | |
| ACTCGGTTGGATTGATAGAG+AGG | + | chr4_3:36132104-36132123 | Msa0639610:intron | 45.0% | |
| GAGTCAATGCGATGTCTAGT+AGG | + | chr4_3:36132442-36132461 | Msa0639610:intron | 45.0% | |
| ! | CGATGCACAAGTTGGGTTTG+GGG | - | chr4_3:36129076-36129095 | None:intergenic | 50.0% |
| ! | CCGATGCACAAGTTGGGTTT+GGG | - | chr4_3:36129077-36129096 | None:intergenic | 50.0% |
| CCCAAACCCAACTTGTGCAT+CGG | + | chr4_3:36129074-36129093 | Msa0639610:five_prime_UTR | 50.0% | |
| CCAAACCCAACTTGTGCATC+GGG | + | chr4_3:36129075-36129094 | Msa0639610:five_prime_UTR | 50.0% | |
| CAAACCCAACTTGTGCATCG+GGG | + | chr4_3:36129076-36129095 | Msa0639610:five_prime_UTR | 50.0% | |
| GATACCCCGATGCACAAGTT+GGG | - | chr4_3:36129083-36129102 | None:intergenic | 50.0% | |
| TGATACCCCGATGCACAAGT+TGG | - | chr4_3:36129084-36129103 | None:intergenic | 50.0% | |
| GCTGAAGTAGGTTTGAGCGA+GGG | - | chr4_3:36129160-36129179 | None:intergenic | 50.0% | |
| AGCTGAAGTAGGTTTGAGCG+AGG | - | chr4_3:36129161-36129180 | None:intergenic | 50.0% | |
| ! | TGGAGTGAATTTGGTGAGGG+CGG | - | chr4_3:36129190-36129209 | None:intergenic | 50.0% |
| ! | TTGTGGCGTTGAACCGAAAC+TGG | - | chr4_3:36129210-36129229 | None:intergenic | 50.0% |
| AGTCTTTCTGACGGCGAAGA+CGG | - | chr4_3:36129259-36129278 | None:intergenic | 50.0% | |
| GTGCGTTTGATCTTCACCTG+CGG | + | chr4_3:36129308-36129327 | Msa0639610:five_prime_UTR | 50.0% | |
| CTTCGCTGCCTCTAATGTCT+TGG | + | chr4_3:36129380-36129399 | Msa0639610:five_prime_UTR | 50.0% | |
| CATGACTGAACCAATGGGAC+GGG | + | chr4_3:36129810-36129829 | Msa0639610:five_prime_UTR | 50.0% | |
| TGGAACTGTGCAGACGGAAT+GGG | - | chr4_3:36130057-36130076 | None:intergenic | 50.0% | |
| AGACTTTGGACAATGGCTGG+AGG | + | chr4_3:36131336-36131355 | Msa0639610:CDS | 50.0% | |
| GCATAGGAATCCGGGGATTA+AGG | + | chr4_3:36131380-36131399 | Msa0639610:CDS | 50.0% | |
| GGGTTTCTTACTGACCTTGC+TGG | + | chr4_3:36131890-36131909 | Msa0639610:intron | 50.0% | |
| ! | CTTACTGACCTTGCTGGTTG+TGG | + | chr4_3:36131896-36131915 | Msa0639610:intron | 50.0% |
| ! | CCCGATGCACAAGTTGGGTT+TGG | - | chr4_3:36129078-36129097 | None:intergenic | 55.0% |
| TTTGAGCGAGGGTTTCGCGA+GGG | - | chr4_3:36129149-36129168 | None:intergenic | 55.0% | |
| ! | GAGTGAATTTGGTGAGGGCG+GGG | - | chr4_3:36129188-36129207 | None:intergenic | 55.0% |
| ! | GGAGTGAATTTGGTGAGGGC+GGG | - | chr4_3:36129189-36129208 | None:intergenic | 55.0% |
| CTGGAACTGTGCAGACGGAA+TGG | - | chr4_3:36130058-36130077 | None:intergenic | 55.0% | |
| !! | AGGTGCTGGAACTGTGCAGA+CGG | - | chr4_3:36130063-36130082 | None:intergenic | 55.0% |
| GGCCTACTCTTGCTGCATGA+AGG | + | chr4_3:36132061-36132080 | Msa0639610:intron | 55.0% | |
| GGCCTTCATGCAGCAAGAGT+AGG | - | chr4_3:36132066-36132085 | None:intergenic | 55.0% | |
| GTTTGAGCGAGGGTTTCGCG+AGG | - | chr4_3:36129150-36129169 | None:intergenic | 60.0% | |
| GAATGGGCAGCCTCACGTAC+AGG | - | chr4_3:36130041-36130060 | None:intergenic | 60.0% | |
| GGCGGGGTCTCAGCTGAAGT+AGG | - | chr4_3:36129172-36129191 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 36128969 | 36132784 | 36128969 | ID=Msa0639610;Name=Msa0639610 |
| chr4_3 | mRNA | 36128969 | 36132784 | 36128969 | ID=Msa0639610-mRNA-1;Parent=Msa0639610;Name=Msa0639610-mRNA-1;_AED=0.09;_eAED=0.09;_QI=1620|0.75|1|1|0.25|0.2|5|50|85 |
| chr4_3 | exon | 36128969 | 36129178 | 36128969 | ID=Msa0639610-mRNA-1:exon:8370;Parent=Msa0639610-mRNA-1 |
| chr4_3 | exon | 36129252 | 36130196 | 36129252 | ID=Msa0639610-mRNA-1:exon:8371;Parent=Msa0639610-mRNA-1 |
| chr4_3 | exon | 36130777 | 36131219 | 36130777 | ID=Msa0639610-mRNA-1:exon:8372;Parent=Msa0639610-mRNA-1 |
| chr4_3 | exon | 36131299 | 36131401 | 36131299 | ID=Msa0639610-mRNA-1:exon:8373;Parent=Msa0639610-mRNA-1 |
| chr4_3 | exon | 36132558 | 36132784 | 36132558 | ID=Msa0639610-mRNA-1:exon:8374;Parent=Msa0639610-mRNA-1 |
| chr4_3 | five_prime_UTR | 36128969 | 36129178 | 36128969 | ID=Msa0639610-mRNA-1:five_prime_utr;Parent=Msa0639610-mRNA-1 |
| chr4_3 | five_prime_UTR | 36129252 | 36130196 | 36129252 | ID=Msa0639610-mRNA-1:five_prime_utr;Parent=Msa0639610-mRNA-1 |
| chr4_3 | five_prime_UTR | 36130777 | 36131219 | 36130777 | ID=Msa0639610-mRNA-1:five_prime_utr;Parent=Msa0639610-mRNA-1 |
| chr4_3 | five_prime_UTR | 36131299 | 36131320 | 36131299 | ID=Msa0639610-mRNA-1:five_prime_utr;Parent=Msa0639610-mRNA-1 |
| chr4_3 | CDS | 36131321 | 36131401 | 36131321 | ID=Msa0639610-mRNA-1:cds;Parent=Msa0639610-mRNA-1 |
| chr4_3 | CDS | 36132558 | 36132734 | 36132558 | ID=Msa0639610-mRNA-1:cds;Parent=Msa0639610-mRNA-1 |
| chr4_3 | three_prime_UTR | 36132735 | 36132784 | 36132735 | ID=Msa0639610-mRNA-1:three_prime_utr;Parent=Msa0639610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
