Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0102070 | AES78414.2 | 64.802 | 429 | 109 | 5 | 1 | 429 | 1 | 387 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0102070 | G7L3B4 | 64.802 | 429 | 109 | 5 | 1 | 429 | 1 | 387 | 0.0 | 553 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012700 | Msa0102070 | 0.801504 | 8.729231e-49 | -8.615850e-47 |
| Msa0013750 | Msa0102070 | 0.821621 | 3.663339e-53 | -8.615850e-47 |
| Msa0015750 | Msa0102070 | 0.862774 | 3.992790e-64 | -8.615850e-47 |
| Msa0016570 | Msa0102070 | 0.863414 | 2.532466e-64 | -8.615850e-47 |
| Msa0016580 | Msa0102070 | 0.838850 | 2.251064e-57 | -8.615850e-47 |
| Msa0047770 | Msa0102070 | 0.828279 | 9.817856e-55 | -8.615850e-47 |
| Msa0060820 | Msa0102070 | 0.803710 | 3.060718e-49 | -8.615850e-47 |
| Msa0071500 | Msa0102070 | 0.819436 | 1.162516e-52 | -8.615850e-47 |
| Msa0087960 | Msa0102070 | 0.820701 | 5.968753e-53 | -8.615850e-47 |
| Msa0092630 | Msa0102070 | 0.817975 | 2.495226e-52 | -8.615850e-47 |
| Msa0102070 | Msa0110270 | 0.832750 | 7.908953e-56 | -8.615850e-47 |
| Msa0102070 | Msa0111510 | 0.812275 | 4.601560e-51 | -8.615850e-47 |
| Msa0102070 | Msa0123810 | 0.818243 | 2.169955e-52 | -8.615850e-47 |
| Msa0102070 | Msa0124100 | 0.829978 | 3.803391e-55 | -8.615850e-47 |
| Msa0102070 | Msa0124150 | 0.814129 | 1.802788e-51 | -8.615850e-47 |
| Msa0102070 | Msa0142220 | 0.845301 | 4.423197e-59 | -8.615850e-47 |
| Msa0102070 | Msa0145750 | 0.844338 | 8.044511e-59 | -8.615850e-47 |
| Msa0102070 | Msa0153910 | 0.838951 | 2.119802e-57 | -8.615850e-47 |
| Msa0102070 | Msa0200000 | 0.849916 | 2.377929e-60 | -8.615850e-47 |
| Msa0102070 | Msa0200940 | 0.800944 | 1.136130e-48 | -8.615850e-47 |
| Msa0102070 | Msa0227480 | 0.892286 | 1.825207e-74 | -8.615850e-47 |
| Msa0102070 | Msa0231000 | 0.817544 | 3.121203e-52 | -8.615850e-47 |
| Msa0102070 | Msa0232850 | 0.861565 | 9.383097e-64 | -8.615850e-47 |
| Msa0102070 | Msa0235140 | 0.819976 | 8.751227e-53 | -8.615850e-47 |
| Msa0102070 | Msa0247260 | 0.827809 | 1.274345e-54 | -8.615850e-47 |
| Msa0102070 | Msa0264450 | 0.805930 | 1.052550e-49 | -8.615850e-47 |
| Msa0102070 | Msa0267000 | 0.907105 | 7.257493e-81 | -8.615850e-47 |
| Msa0102070 | Msa0267010 | 0.917729 | 3.724160e-86 | -8.615850e-47 |
| Msa0102070 | Msa0270520 | 0.848862 | 4.675069e-60 | -8.615850e-47 |
| Msa0102070 | Msa0282310 | 0.814619 | 1.404674e-51 | -8.615850e-47 |
| Msa0102070 | Msa0285810 | 0.850895 | 1.263085e-60 | -8.615850e-47 |
| Msa0102070 | Msa0294030 | 0.804627 | 1.972296e-49 | -8.615850e-47 |
| Msa0102070 | Msa0304170 | 0.844079 | 9.437505e-59 | -8.615850e-47 |
| Msa0102070 | Msa0306460 | 0.848626 | 5.436735e-60 | -8.615850e-47 |
| Msa0102070 | Msa0309020 | 0.804225 | 2.392780e-49 | -8.615850e-47 |
| Msa0102070 | Msa0313760 | 0.817346 | 3.459453e-52 | -8.615850e-47 |
| Msa0102070 | Msa0342240 | 0.916197 | 2.378189e-85 | -8.615850e-47 |
| Msa0102070 | Msa0360510 | 0.909172 | 7.640819e-82 | -8.615850e-47 |
| Msa0102070 | Msa0362420 | 0.806696 | 7.255181e-50 | -8.615850e-47 |
| Msa0102070 | Msa0363300 | 0.846826 | 1.701702e-59 | -8.615850e-47 |
| Msa0102070 | Msa0365500 | 0.864602 | 1.080199e-64 | -8.615850e-47 |
| Msa0102070 | Msa0366430 | 0.800733 | 1.254569e-48 | -8.615850e-47 |
| Msa0102070 | Msa0384800 | 0.867727 | 1.105837e-65 | -8.615850e-47 |
| Msa0102070 | Msa0394970 | 0.806429 | 8.261198e-50 | -8.615850e-47 |
| Msa0102070 | Msa0406120 | 0.847558 | 1.072110e-59 | -8.615850e-47 |
| Msa0102070 | Msa0406280 | 0.819573 | 1.081684e-52 | -8.615850e-47 |
| Msa0102070 | Msa0407750 | 0.818469 | 1.928973e-52 | -8.615850e-47 |
| Msa0102070 | Msa0414410 | 0.885855 | 5.672988e-72 | -8.615850e-47 |
| Msa0102070 | Msa0414420 | 0.927015 | 2.114104e-91 | -8.615850e-47 |
| Msa0102070 | Msa0424550 | 0.803183 | 3.936980e-49 | -8.615850e-47 |
| Msa0102070 | Msa0429880 | 0.806978 | 6.325455e-50 | -8.615850e-47 |
| Msa0102070 | Msa0436780 | 0.851535 | 8.330433e-61 | -8.615850e-47 |
| Msa0102070 | Msa0436800 | 0.823627 | 1.250838e-53 | -8.615850e-47 |
| Msa0102070 | Msa0438620 | 0.861603 | 9.134143e-64 | -8.615850e-47 |
| Msa0102070 | Msa0444130 | 0.827667 | 1.378135e-54 | -8.615850e-47 |
| Msa0102070 | Msa0450000 | 0.882080 | 1.405455e-70 | -8.615850e-47 |
| Msa0102070 | Msa0450570 | 0.911037 | 9.562299e-83 | -8.615850e-47 |
| Msa0102070 | Msa0451730 | 0.857198 | 1.921195e-62 | -8.615850e-47 |
| Msa0102070 | Msa0452900 | 0.940930 | 1.002390e-100 | -8.615850e-47 |
| Msa0102070 | Msa0452910 | 0.806056 | 9.899532e-50 | -8.615850e-47 |
| Msa0102070 | Msa0453120 | 0.872375 | 3.337294e-67 | -8.615850e-47 |
| Msa0102070 | Msa0454370 | 0.828659 | 7.950171e-55 | -8.615850e-47 |
| Msa0102070 | Msa0454910 | 0.837956 | 3.826640e-57 | -8.615850e-47 |
| Msa0102070 | Msa0459160 | 0.849616 | 2.884948e-60 | -8.615850e-47 |
| Msa0102070 | Msa0459170 | 0.847840 | 8.964585e-60 | -8.615850e-47 |
| Msa0102070 | Msa0485030 | 0.849096 | 4.024889e-60 | -8.615850e-47 |
| Msa0102070 | Msa0491590 | 0.865460 | 5.809801e-65 | -8.615850e-47 |
| Msa0102070 | Msa0502760 | 0.828304 | 9.684347e-55 | -8.615850e-47 |
| Msa0102070 | Msa0506190 | 0.817550 | 3.111776e-52 | -8.615850e-47 |
| Msa0102070 | Msa0506270 | 0.849198 | 3.770518e-60 | -8.615850e-47 |
| Msa0102070 | Msa0526580 | 0.830407 | 2.988712e-55 | -8.615850e-47 |
| Msa0102070 | Msa0534540 | 0.837873 | 4.019145e-57 | -8.615850e-47 |
| Msa0102070 | Msa0564890 | 0.895136 | 1.276629e-75 | -8.615850e-47 |
| Msa0102070 | Msa0575010 | 0.804702 | 1.902986e-49 | -8.615850e-47 |
| Msa0102070 | Msa0596150 | 0.842283 | 2.842248e-58 | -8.615850e-47 |
| Msa0102070 | Msa0604350 | 0.824426 | 8.124021e-54 | -8.615850e-47 |
| Msa0102070 | Msa0636170 | 0.850292 | 1.866485e-60 | -8.615850e-47 |
| Msa0102070 | Msa0639610 | 0.839458 | 1.565262e-57 | -8.615850e-47 |
| Msa0102070 | Msa0678930 | 0.845148 | 4.864272e-59 | -8.615850e-47 |
| Msa0102070 | Msa0694370 | 0.819915 | 9.038765e-53 | -8.615850e-47 |
| Msa0102070 | Msa0720350 | 0.826070 | 3.319213e-54 | -8.615850e-47 |
| Msa0102070 | Msa0725850 | 0.831511 | 1.601508e-55 | -8.615850e-47 |
| Msa0102070 | Msa0726140 | 0.896975 | 2.200300e-76 | -8.615850e-47 |
| Msa0102070 | Msa0729800 | 0.867891 | 9.793233e-66 | -8.615850e-47 |
| Msa0102070 | Msa0732310 | 0.807121 | 5.901350e-50 | -8.615850e-47 |
| Msa0102070 | Msa0733290 | 0.851931 | 6.433645e-61 | -8.615850e-47 |
| Msa0102070 | Msa0741990 | 0.833296 | 5.786037e-56 | -8.615850e-47 |
| Msa0102070 | Msa0743810 | 0.911622 | 4.938935e-83 | -8.615850e-47 |
| Msa0102070 | Msa0745060 | 0.903330 | 3.878759e-79 | -8.615850e-47 |
| Msa0102070 | Msa0767720 | 0.847279 | 1.278405e-59 | -8.615850e-47 |
| Msa0102070 | Msa0777870 | 0.832635 | 8.446921e-56 | -8.615850e-47 |
| Msa0102070 | Msa0783160 | 0.892793 | 1.144164e-74 | -8.615850e-47 |
| Msa0102070 | Msa0784290 | 0.808906 | 2.460353e-50 | -8.615850e-47 |
| Msa0102070 | Msa0787600 | 0.873084 | 1.932876e-67 | -8.615850e-47 |
| Msa0102070 | Msa0808010 | 0.890768 | 7.305157e-74 | -8.615850e-47 |
| Msa0102070 | Msa0808020 | 0.886750 | 2.606900e-72 | -8.615850e-47 |
| Msa0102070 | Msa0811080 | 0.818334 | 2.069193e-52 | -8.615850e-47 |
| Msa0102070 | Msa0811270 | 0.812316 | 4.506936e-51 | -8.615850e-47 |
| Msa0102070 | Msa0824600 | 0.806560 | 7.752033e-50 | -8.615850e-47 |
| Msa0102070 | Msa0825860 | 0.910175 | 2.514038e-82 | -8.615850e-47 |
| Msa0102070 | Msa0833290 | 0.849629 | 2.860773e-60 | -8.615850e-47 |
| Msa0102070 | Msa0833300 | 0.823869 | 1.097697e-53 | -8.615850e-47 |
| Msa0102070 | Msa0845930 | 0.809752 | 1.619984e-50 | -8.615850e-47 |
| Msa0102070 | Msa0846210 | 0.862083 | 6.513453e-64 | -8.615850e-47 |
| Msa0102070 | Msa0846330 | 0.875841 | 2.241686e-68 | -8.615850e-47 |
| Msa0102070 | Msa0846350 | 0.877799 | 4.702052e-69 | -8.615850e-47 |
| Msa0102070 | Msa0848960 | 0.845281 | 4.478124e-59 | -8.615850e-47 |
| Msa0102070 | Msa0854980 | 0.808375 | 3.193807e-50 | -8.615850e-47 |
| Msa0102070 | Msa0858980 | 0.857861 | 1.223423e-62 | -8.615850e-47 |
| Msa0102070 | Msa0865320 | 0.888621 | 5.018489e-73 | -8.615850e-47 |
| Msa0102070 | Msa0866810 | 0.810752 | 9.857484e-51 | -8.615850e-47 |
| Msa0102070 | Msa0872230 | 0.841639 | 4.206059e-58 | -8.615850e-47 |
| Msa0102070 | Msa0873460 | 0.831006 | 2.131077e-55 | -8.615850e-47 |
| Msa0102070 | Msa0885280 | 0.800814 | 1.207800e-48 | -8.615850e-47 |
| Msa0102070 | Msa0885290 | 0.851836 | 6.845633e-61 | -8.615850e-47 |
| Msa0102070 | Msa0887920 | 0.821737 | 3.444573e-53 | -8.615850e-47 |
| Msa0102070 | Msa0888370 | 0.849850 | 2.482004e-60 | -8.615850e-47 |
| Msa0102070 | Msa0888420 | 0.835203 | 1.923561e-56 | -8.615850e-47 |
| Msa0102070 | Msa0889850 | 0.804604 | 1.994275e-49 | -8.615850e-47 |
| Msa0102070 | Msa0896080 | 0.840633 | 7.732632e-58 | -8.615850e-47 |
| Msa0102070 | Msa0907260 | 0.817406 | 3.352366e-52 | -8.615850e-47 |
| Msa0102070 | Msa0914760 | 0.810796 | 9.644622e-51 | -8.615850e-47 |
| Msa0102070 | Msa0952190 | 0.863932 | 1.748144e-64 | -8.615850e-47 |
| Msa0102070 | Msa0952350 | 0.812737 | 3.646545e-51 | -8.615850e-47 |
| Msa0102070 | Msa0952720 | 0.824291 | 8.742011e-54 | -8.615850e-47 |
| Msa0102070 | Msa0954910 | 0.805602 | 1.233300e-49 | -8.615850e-47 |
| Msa0102070 | Msa0956270 | 0.819723 | 1.000069e-52 | -8.615850e-47 |
| Msa0102070 | Msa0957680 | 0.805524 | 1.280562e-49 | -8.615850e-47 |
| Msa0102070 | Msa0974870 | 0.806304 | 8.778856e-50 | -8.615850e-47 |
| Msa0102070 | Msa0979410 | 0.816136 | 6.460141e-52 | -8.615850e-47 |
| Msa0102070 | Msa0979850 | 0.818198 | 2.220948e-52 | -8.615850e-47 |
| Msa0102070 | Msa0981270 | 0.820437 | 6.864118e-53 | -8.615850e-47 |
| Msa0102070 | Msa0981370 | 0.875928 | 2.093184e-68 | -8.615850e-47 |
| Msa0102070 | Msa0986360 | 0.805350 | 1.392784e-49 | -8.615850e-47 |
| Msa0102070 | Msa0986400 | 0.818766 | 1.651225e-52 | -8.615850e-47 |
| Msa0102070 | Msa0989060 | 0.878715 | 2.244471e-69 | -8.615850e-47 |
| Msa0102070 | Msa1016280 | 0.907123 | 7.116856e-81 | -8.615850e-47 |
| Msa0102070 | Msa1023050 | 0.814754 | 1.311773e-51 | -8.615850e-47 |
| Msa0102070 | Msa1024240 | 0.820023 | 8.535887e-53 | -8.615850e-47 |
| Msa0102070 | Msa1025360 | 0.924530 | 6.227300e-90 | -8.615850e-47 |
| Msa0102070 | Msa1025370 | 0.908254 | 2.090679e-81 | -8.615850e-47 |
| Msa0102070 | Msa1030060 | 0.801953 | 7.058312e-49 | -8.615850e-47 |
| Msa0102070 | Msa1037200 | 0.805783 | 1.129651e-49 | -8.615850e-47 |
| Msa0102070 | Msa1044830 | 0.913296 | 7.253043e-84 | -8.615850e-47 |
| Msa0102070 | Msa1044840 | 0.923258 | 3.364842e-89 | -8.615850e-47 |
| Msa0102070 | Msa1052500 | 0.816769 | 4.662059e-52 | -8.615850e-47 |
| Msa0102070 | Msa1060840 | 0.860066 | 2.676585e-63 | -8.615850e-47 |
| Msa0102070 | Msa1077460 | 0.817714 | 2.857650e-52 | -8.615850e-47 |
| Msa0102070 | Msa1092990 | 0.881003 | 3.443840e-70 | -8.615850e-47 |
| Msa0102070 | Msa1096580 | 0.802405 | 5.697311e-49 | -8.615850e-47 |
| Msa0102070 | Msa1099970 | 0.800351 | 1.501549e-48 | -8.615850e-47 |
| Msa0102070 | Msa1100980 | 0.916813 | 1.133090e-85 | -8.615850e-47 |
| Msa0102070 | Msa1109440 | 0.893189 | 7.920502e-75 | -8.615850e-47 |
| Msa0102070 | Msa1121200 | 0.882216 | 1.254293e-70 | -8.615850e-47 |
| Msa0102070 | Msa1135220 | 0.806928 | 6.481495e-50 | -8.615850e-47 |
| Msa0102070 | Msa1135740 | 0.896704 | 2.855671e-76 | -8.615850e-47 |
| Msa0102070 | Msa1136090 | 0.838892 | 2.195385e-57 | -8.615850e-47 |
| Msa0102070 | Msa1146110 | 0.895044 | 1.391794e-75 | -8.615850e-47 |
| Msa0102070 | Msa1149360 | 0.848694 | 5.207308e-60 | -8.615850e-47 |
| Msa0102070 | Msa1150370 | 0.851792 | 7.045759e-61 | -8.615850e-47 |
| Msa0102070 | Msa1164120 | 0.800402 | 1.465973e-48 | -8.615850e-47 |
| Msa0102070 | Msa1173920 | 0.842915 | 1.932036e-58 | -8.615850e-47 |
| Msa0102070 | Msa1178340 | 0.805085 | 1.582618e-49 | -8.615850e-47 |
| Msa0102070 | Msa1182090 | 0.809598 | 1.748605e-50 | -8.615850e-47 |
| Msa0102070 | Msa1187940 | 0.883943 | 2.922977e-71 | -8.615850e-47 |
| Msa0102070 | Msa1187950 | 0.888418 | 6.009617e-73 | -8.615850e-47 |
| Msa0102070 | Msa1192640 | 0.928819 | 1.682337e-92 | -8.615850e-47 |
| Msa0102070 | Msa1193730 | 0.850593 | 1.536321e-60 | -8.615850e-47 |
| Msa0102070 | Msa1230430 | 0.806876 | 6.649506e-50 | -8.615850e-47 |
| Msa0102070 | Msa1246880 | 0.841292 | 5.190466e-58 | -8.615850e-47 |
| Msa0102070 | Msa1260100 | 0.818122 | 2.310567e-52 | -8.615850e-47 |
| Msa0102070 | Msa1269670 | 0.899387 | 2.085002e-77 | -8.615850e-47 |
| Msa0102070 | Msa1270230 | 0.911771 | 4.168673e-83 | -8.615850e-47 |
| Msa0102070 | Msa1270240 | 0.888223 | 7.141792e-73 | -8.615850e-47 |
| Msa0102070 | Msa1270270 | 0.879596 | 1.094806e-69 | -8.615850e-47 |
| Msa0102070 | Msa1273230 | 0.824901 | 6.278795e-54 | -8.615850e-47 |
| Msa0102070 | Msa1283330 | 0.914486 | 1.811714e-84 | -8.615850e-47 |
| Msa0102070 | Msa1285930 | 0.935185 | 1.262250e-96 | -8.615850e-47 |
| Msa0102070 | Msa1287800 | 0.923092 | 4.187190e-89 | -8.615850e-47 |
| Msa0102070 | Msa1287810 | 0.936804 | 9.650851e-98 | -8.615850e-47 |
| Msa0102070 | Msa1287820 | 0.812789 | 3.552942e-51 | -8.615850e-47 |
| Msa0102070 | Msa1287830 | 0.849992 | 2.264945e-60 | -8.615850e-47 |
| Msa0102070 | Msa1289420 | 0.842762 | 2.121633e-58 | -8.615850e-47 |
| Msa0102070 | Msa1289430 | 0.862369 | 5.322161e-64 | -8.615850e-47 |
| Msa0102070 | Msa1297210 | 0.811978 | 5.342201e-51 | -8.615850e-47 |
| Msa0102070 | Msa1305480 | 0.858411 | 8.392728e-63 | -8.615850e-47 |
| Msa0102070 | Msa1307890 | 0.865444 | 5.878079e-65 | -8.615850e-47 |
| Msa0102070 | Msa1310120 | 0.837042 | 6.562775e-57 | -8.615850e-47 |
| Msa0102070 | Msa1314280 | 0.806856 | 6.712621e-50 | -8.615850e-47 |
| Msa0102070 | Msa1320300 | 0.851309 | 9.654863e-61 | -8.615850e-47 |
| Msa0102070 | Msa1340590 | 0.860074 | 2.662009e-63 | -8.615850e-47 |
| Msa0102070 | Msa1342200 | 0.829149 | 6.048710e-55 | -8.615850e-47 |
| Msa0102070 | Msa1344520 | 0.834717 | 2.550421e-56 | -8.615850e-47 |
| Msa0102070 | Msa1369430 | 0.841159 | 5.627020e-58 | -8.615850e-47 |
| Msa0102070 | Msa1382690 | 0.831811 | 1.350696e-55 | -8.615850e-47 |
| Msa0102070 | Msa1382700 | 0.847695 | 9.826013e-60 | -8.615850e-47 |
| Msa0102070 | Msa1386330 | 0.803577 | 3.261933e-49 | -8.615850e-47 |
| Msa0102070 | Msa1397150 | 0.817765 | 2.782977e-52 | -8.615850e-47 |
| Msa0102070 | Msa1397580 | 0.857194 | 1.927356e-62 | -8.615850e-47 |
| Msa0102070 | Msa1402790 | 0.826029 | 3.394924e-54 | -8.615850e-47 |
| Msa0102070 | Msa1402930 | 0.810202 | 1.295797e-50 | -8.615850e-47 |
| Msa0102070 | Msa1404000 | 0.896249 | 4.421189e-76 | -8.615850e-47 |
| Msa0102070 | Msa1408780 | 0.846211 | 2.504853e-59 | -8.615850e-47 |
| Msa0102070 | Msa1415310 | 0.896072 | 5.239772e-76 | -8.615850e-47 |
| Msa0102070 | Msa1422180 | 0.868787 | 5.036890e-66 | -8.615850e-47 |
| Msa0102070 | Msa1433120 | 0.899246 | 2.396927e-77 | -8.615850e-47 |
| Msa0102070 | Msa1451570 | 0.823673 | 1.220089e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0102070 | MtrunA17_Chr7g0226131 | 79.310 | 232 | 48 | 0 | 1 | 232 | 1 | 232 | 8.78e-141 | 401 |
| Msa0102070 | MtrunA17_Chr6g0462331 | 44.169 | 403 | 209 | 7 | 1 | 388 | 1 | 402 | 1.52e-109 | 330 |
| Msa0102070 | MtrunA17_Chr1g0202531 | 42.694 | 438 | 230 | 9 | 1 | 420 | 19 | 453 | 1.34e-102 | 312 |
| Msa0102070 | MtrunA17_Chr7g0215391 | 41.611 | 447 | 231 | 8 | 1 | 420 | 12 | 455 | 4.94e-100 | 306 |
| Msa0102070 | MtrunA17_Chr1g0194781 | 41.611 | 447 | 231 | 8 | 1 | 420 | 12 | 455 | 4.94e-100 | 306 |
| Msa0102070 | MtrunA17_Chr5g0446191 | 28.873 | 284 | 188 | 9 | 6 | 284 | 268 | 542 | 1.16e-24 | 106 |
| Msa0102070 | MtrunA17_Chr5g0446231 | 28.511 | 235 | 157 | 7 | 6 | 235 | 260 | 488 | 1.79e-23 | 102 |
| Msa0102070 | MtrunA17_Chr6g0467231 | 43.750 | 112 | 61 | 1 | 190 | 299 | 7 | 118 | 8.29e-22 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 146 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGCTTTCTGTTGATTCTT+AGG | 0.202112 | 1_3:+8775645 | None:intergenic |
| CCATCATTCAGAAGCGAAAA+TGG | 0.226812 | 1_3:-8775443 | Msa0102070:CDS |
| TACCTACACTTGGGATTATC+TGG | 0.253419 | 1_3:-8774680 | Msa0102070:CDS |
| GCACAGTGACAAAGAGAAAA+AGG | 0.255289 | 1_3:-8774800 | Msa0102070:CDS |
| AGCCTTTCCCGGATTGATAA+TGG | 0.271020 | 1_3:-8774908 | Msa0102070:CDS |
| TTCAACAAAACAAAGGGAAT+TGG | 0.318155 | 1_3:-8775215 | Msa0102070:CDS |
| TTCAAGATGGTTTGAGCAAT+GGG | 0.340763 | 1_3:+8775096 | None:intergenic |
| TGCGAACGCCATGCCTTTAG+AGG | 0.341762 | 1_3:-8775364 | Msa0102070:CDS |
| ATTTCCCTTCAGCTGAGATT+TGG | 0.348120 | 1_3:+8775481 | None:intergenic |
| GCCTTTCCCGGATTGATAAT+GGG | 0.354143 | 1_3:-8774907 | Msa0102070:CDS |
| GGGGACAGGCCATTTATCTA+TGG | 0.362357 | 1_3:-8774526 | Msa0102070:CDS |
| AGGCTTATTGTGCTTGGCCT+GGG | 0.363336 | 1_3:-8774546 | Msa0102070:CDS |
| CTTGTTTCATATCCCTTTCC+CGG | 0.369039 | 1_3:+8775159 | None:intergenic |
| ATTCTTCATGAACATGGTTC+GGG | 0.370290 | 1_3:+8774857 | None:intergenic |
| GCAAGTGGAAAGGTGGCTCT+TGG | 0.378022 | 1_3:+8775050 | None:intergenic |
| ATTGTGCTTGGCCTGGGGAC+AGG | 0.382800 | 1_3:-8774540 | Msa0102070:CDS |
| ATCTGCTATCTGTGGGTAAC+CGG | 0.383417 | 1_3:+8774597 | None:intergenic |
| CGATTTCAGTGTTGATTTGA+GGG | 0.394788 | 1_3:+8775400 | None:intergenic |
| AATTCTTCATGAACATGGTT+CGG | 0.397039 | 1_3:+8774856 | None:intergenic |
| AAGGCTTATTGTGCTTGGCC+TGG | 0.398707 | 1_3:-8774547 | Msa0102070:CDS |
| AGGGTCCCTTTAGCCTTTCC+CGG | 0.402613 | 1_3:-8774919 | Msa0102070:CDS |
| TCAATCAACCATTCTGCAAC+CGG | 0.405154 | 1_3:-8775178 | Msa0102070:CDS |
| TGAAATGGACAAAGTTCATC+AGG | 0.407644 | 1_3:+8775240 | None:intergenic |
| TGTAGGTAAAACACTGCCTC+TGG | 0.411974 | 1_3:+8774695 | None:intergenic |
| TTGGTGTGACGAGGAAGTTC+CGG | 0.420676 | 1_3:+8774765 | None:intergenic |
| TGGTGGTTCTTCATTTATGC+AGG | 0.422918 | 1_3:-8774497 | Msa0102070:CDS |
| CAAGTGGAAAGGTGGCTCTT+GGG | 0.424471 | 1_3:+8775051 | None:intergenic |
| GATCAATCCCATTATCAATC+CGG | 0.425229 | 1_3:+8774900 | None:intergenic |
| AACTATGTAAACGGAAGCTT+TGG | 0.426298 | 1_3:-8775518 | Msa0102070:CDS |
| AGATTGCTTTCTCTTGCCTC+TGG | 0.429156 | 1_3:+8775614 | None:intergenic |
| TCTTGGGTTTGATATTGAAC+AGG | 0.432713 | 1_3:+8775067 | None:intergenic |
| ATGATCCTCGCAACGTCAAC+CGG | 0.434435 | 1_3:+8774982 | None:intergenic |
| CTGTGCTCGTCATAAGGTCT+TGG | 0.434602 | 1_3:+8775576 | None:intergenic |
| TCAACAAAACAAAGGGAATT+GGG | 0.439975 | 1_3:-8775214 | Msa0102070:CDS |
| AACCATTCTGCAACCGGGAA+AGG | 0.442403 | 1_3:-8775172 | Msa0102070:CDS |
| CTACATCCTCACCGATCAAC+CGG | 0.444300 | 1_3:-8775001 | Msa0102070:CDS |
| GAGAAGTCATCAGTTGATAA+TGG | 0.446299 | 1_3:+8774733 | None:intergenic |
| TGAGCCAGCAGATGATGATC+AGG | 0.450552 | 1_3:-8774470 | Msa0102070:CDS |
| CAATAAGCCTTGTATGCCTC+TGG | 0.450925 | 1_3:+8774559 | None:intergenic |
| ATTCTTCACTGTTGCTCACC+AGG | 0.453544 | 1_3:-8775553 | Msa0102070:CDS |
| AACCGGCATGCAGCTGCATC+CGG | 0.455735 | 1_3:+8774614 | None:intergenic |
| CAAGGTAGTCATTAATGCCT+TGG | 0.457105 | 1_3:+8775286 | None:intergenic |
| GAAGCGAAAATGGGAACAAC+TGG | 0.458894 | 1_3:-8775433 | Msa0102070:CDS |
| ACGATTTCAGTGTTGATTTG+AGG | 0.463765 | 1_3:+8775399 | None:intergenic |
| CCACCGCGTCCGGATCATCT+TGG | 0.463786 | 1_3:+8774437 | None:intergenic |
| ATCAATCCGGGAAAGGCTAA+AGG | 0.465957 | 1_3:+8774913 | None:intergenic |
| GGGACAGGCCATTTATCTAT+GGG | 0.466796 | 1_3:-8774525 | Msa0102070:CDS |
| AAGAATCTGTGCTCGTCATA+AGG | 0.470401 | 1_3:+8775570 | None:intergenic |
| CCCACAGATAGCAGATCATC+AGG | 0.472523 | 1_3:-8774590 | Msa0102070:CDS |
| TTCACCTTCAACAAAACAAA+GGG | 0.472719 | 1_3:-8775221 | Msa0102070:CDS |
| GCAATGATAGCATCAGTGAT+TGG | 0.473233 | 1_3:+8774826 | None:intergenic |
| GTAAAACACTGCCTCTGGGC+GGG | 0.474237 | 1_3:+8774700 | None:intergenic |
| ACCATTCTGCAACCGGGAAA+GGG | 0.475704 | 1_3:-8775171 | Msa0102070:CDS |
| GTTTACATAGTTCGTGATAC+CGG | 0.475853 | 1_3:+8775529 | None:intergenic |
| TAGCTTCAAAACCATGATAC+GGG | 0.477285 | 1_3:-8775331 | Msa0102070:CDS |
| CTACCCTGATCATCATCTGC+TGG | 0.477960 | 1_3:+8774466 | None:intergenic |
| TCCTACTCCAGAGGCATACA+AGG | 0.479432 | 1_3:-8774566 | Msa0102070:CDS |
| TCAGTGTTGATTTGAGGGTG+AGG | 0.482065 | 1_3:+8775405 | None:intergenic |
| CAGTGTTGATTTGAGGGTGA+GGG | 0.482910 | 1_3:+8775406 | None:intergenic |
| GGTCATGTTACACTTCTTAA+CGG | 0.485329 | 1_3:+8775119 | None:intergenic |
| ATCAATCCCATTATCAATCC+GGG | 0.490139 | 1_3:+8774901 | None:intergenic |
| GGACAGGCCATTTATCTATG+GGG | 0.491899 | 1_3:-8774524 | Msa0102070:CDS |
| GTTGCACTCACCACCGCGTC+CGG | 0.497105 | 1_3:+8774427 | None:intergenic |
| CATACAAGGCTTATTGTGCT+TGG | 0.497901 | 1_3:-8774552 | Msa0102070:CDS |
| TTAGCTTCAAAACCATGATA+CGG | 0.499906 | 1_3:-8775332 | Msa0102070:CDS |
| GATCATTGCTGAAGAACTAA+AGG | 0.500055 | 1_3:-8774965 | Msa0102070:CDS |
| TAAAACACTGCCTCTGGGCG+GGG | 0.502146 | 1_3:+8774701 | None:intergenic |
| CATCATTCAGAAGCGAAAAT+GGG | 0.505061 | 1_3:-8775442 | Msa0102070:CDS |
| TAGATAAATGGCCTGTCCCC+AGG | 0.505728 | 1_3:+8774529 | None:intergenic |
| GACAGGCCATTTATCTATGG+GGG | 0.507346 | 1_3:-8774523 | Msa0102070:CDS |
| AAGGCATTAATGACTACCTT+GGG | 0.510007 | 1_3:-8775284 | Msa0102070:CDS |
| CAAGGCATTAATGACTACCT+TGG | 0.511639 | 1_3:-8775285 | Msa0102070:CDS |
| CGCAACGTCAACCGGTTGAT+CGG | 0.513936 | 1_3:+8774990 | None:intergenic |
| TTTCAAGATGGTTTGAGCAA+TGG | 0.514423 | 1_3:+8775095 | None:intergenic |
| TCAATCCGGGAAAGGCTAAA+GGG | 0.514573 | 1_3:+8774914 | None:intergenic |
| ATAGTTCGTGATACCGGTCC+TGG | 0.517281 | 1_3:+8775535 | None:intergenic |
| GAACAGGATCAATTTCAAGA+TGG | 0.519890 | 1_3:+8775083 | None:intergenic |
| CGGTGAGGATGTAGTAGATG+AGG | 0.520259 | 1_3:+8775010 | None:intergenic |
| GGATATGAAACAAGTGTGAC+CGG | 0.520777 | 1_3:-8775150 | Msa0102070:CDS |
| TAGAGCAGACCAAGATGATC+CGG | 0.524914 | 1_3:-8774446 | Msa0102070:CDS |
| TCACTGTTGCTCACCAGGAC+CGG | 0.529171 | 1_3:-8775548 | Msa0102070:CDS |
| TGAAGGCACTCCGAGTTATG+AGG | 0.529601 | 1_3:-8774395 | Msa0102070:CDS |
| TGGGATATCAATGGTGCAAG+TGG | 0.530246 | 1_3:+8775035 | None:intergenic |
| GGTGAGGATGTAGTAGATGA+GGG | 0.530641 | 1_3:+8775011 | None:intergenic |
| GATCACCCTACCCCGTATCA+TGG | 0.533388 | 1_3:+8775320 | None:intergenic |
| CAGTTCCAAATCTCAGCTGA+AGG | 0.536831 | 1_3:-8775486 | Msa0102070:CDS |
| ATTAATGCCTTGGCGATCAA+AGG | 0.538491 | 1_3:+8775296 | None:intergenic |
| ACAGGCCATTTATCTATGGG+GGG | 0.541252 | 1_3:-8774522 | Msa0102070:CDS |
| TCCCTTTCCCGGTTGCAGAA+TGG | 0.541827 | 1_3:+8775170 | None:intergenic |
| GGTATCACGAACTATGTAAA+CGG | 0.542192 | 1_3:-8775527 | Msa0102070:CDS |
| TTGATAATGGAGCTTGAGGT+TGG | 0.548146 | 1_3:+8774746 | None:intergenic |
| TCCCATTATCAATCCGGGAA+AGG | 0.556836 | 1_3:+8774906 | None:intergenic |
| TTTCACCTTCAACAAAACAA+AGG | 0.558062 | 1_3:-8775222 | Msa0102070:CDS |
| TCTGCAATTCTTCATGAACA+TGG | 0.561304 | 1_3:+8774851 | None:intergenic |
| GGCTTATTGTGCTTGGCCTG+GGG | 0.561627 | 1_3:-8774545 | Msa0102070:CDS |
| CAAGATGGTTTGAGCAATGG+GGG | 0.562137 | 1_3:+8775098 | None:intergenic |
| AGGATGTAGTAGATGAGGGG+TGG | 0.563235 | 1_3:+8775015 | None:intergenic |
| AGTGTTGATTTGAGGGTGAG+GGG | 0.563551 | 1_3:+8775407 | None:intergenic |
| CAATCAACCATTCTGCAACC+GGG | 0.566780 | 1_3:-8775177 | Msa0102070:CDS |
| GCGAACGCCATGCCTTTAGA+GGG | 0.570183 | 1_3:-8775363 | Msa0102070:CDS |
| TGCTTTAAGCAACAAAGAGA+GGG | 0.570384 | 1_3:-8774938 | Msa0102070:CDS |
| CAAAACCATGATACGGGGTA+GGG | 0.571288 | 1_3:-8775325 | Msa0102070:CDS |
| CTTCTTAACGGTATCACGCC+CGG | 0.573605 | 1_3:+8775131 | None:intergenic |
| TCAAAACCATGATACGGGGT+AGG | 0.574363 | 1_3:-8775326 | Msa0102070:CDS |
| TTGCTTTAAGCAACAAAGAG+AGG | 0.576173 | 1_3:-8774939 | Msa0102070:CDS |
| AACTCTTGCTCCTCATAACT+CGG | 0.581465 | 1_3:+8774385 | None:intergenic |
| CAGGCCATTTATCTATGGGG+GGG | 0.582052 | 1_3:-8774521 | Msa0102070:CDS |
| GTAGGTAAAACACTGCCTCT+GGG | 0.582361 | 1_3:+8774696 | None:intergenic |
| GATGAGGGGTGGGATATCAA+TGG | 0.583525 | 1_3:+8775026 | None:intergenic |
| ATCAACCGGTTGACGTTGCG+AGG | 0.584684 | 1_3:-8774987 | Msa0102070:CDS |
| CAATGGTGCAAGTGGAAAGG+TGG | 0.586384 | 1_3:+8775043 | None:intergenic |
| TGAGTTTGTAAGGTTTCCCA+AGG | 0.586778 | 1_3:+8775268 | None:intergenic |
| TACCGGATGCAGCTGCATGC+CGG | 0.590190 | 1_3:-8774616 | Msa0102070:CDS |
| AACTGATGACTTCTCACACA+TGG | 0.592343 | 1_3:-8774725 | Msa0102070:CDS |
| TGGTTGATTGAATGAGTGAA+TGG | 0.592964 | 1_3:+8775190 | None:intergenic |
| GCCTTGTATGCCTCTGGAGT+AGG | 0.594668 | 1_3:+8774565 | None:intergenic |
| TCGTCATAAGGTCTTGGAGT+CGG | 0.596159 | 1_3:+8775582 | None:intergenic |
| GGATGTAGTAGATGAGGGGT+GGG | 0.598699 | 1_3:+8775016 | None:intergenic |
| TATCAATGGTGCAAGTGGAA+AGG | 0.602868 | 1_3:+8775040 | None:intergenic |
| CATTGCATGACTCTATGTAC+CGG | 0.603854 | 1_3:-8774633 | Msa0102070:CDS |
| ACCTGATGATCTGCTATCTG+TGG | 0.604122 | 1_3:+8774589 | None:intergenic |
| AGTTCCAAATCTCAGCTGAA+GGG | 0.607927 | 1_3:-8775485 | Msa0102070:CDS |
| TTATCTGGATGCTAACAAGC+GGG | 0.617030 | 1_3:-8774665 | Msa0102070:CDS |
| AGACCAAGATGATCCGGACG+CGG | 0.620121 | 1_3:-8774440 | Msa0102070:CDS |
| TCAGTTGATAATGGAGCTTG+AGG | 0.620594 | 1_3:+8774742 | None:intergenic |
| GTGATCACCTTTGATCGCCA+AGG | 0.624948 | 1_3:-8775303 | Msa0102070:CDS |
| AAAGCATCAGCTTCTGCCAG+AGG | 0.627653 | 1_3:-8775630 | Msa0102070:CDS |
| AGTGCAACAAATTCAAGTGA+AGG | 0.631133 | 1_3:-8774412 | Msa0102070:CDS |
| CCTGATGATCTGCTATCTGT+GGG | 0.637290 | 1_3:+8774590 | None:intergenic |
| GAACGCCATGCCTTTAGAGG+GGG | 0.642642 | 1_3:-8775361 | Msa0102070:CDS |
| TCACTGATGCTATCATTGCA+AGG | 0.646563 | 1_3:-8774822 | Msa0102070:CDS |
| GATATGAAACAAGTGTGACC+GGG | 0.648517 | 1_3:-8775149 | Msa0102070:CDS |
| GTGAGGATGTAGTAGATGAG+GGG | 0.651469 | 1_3:+8775012 | None:intergenic |
| ATTATCTGGATGCTAACAAG+CGG | 0.655069 | 1_3:-8774666 | Msa0102070:CDS |
| GAGCCAGCAGATGATGATCA+GGG | 0.655150 | 1_3:-8774469 | Msa0102070:CDS |
| GAAATGGACAAAGTTCATCA+GGG | 0.657170 | 1_3:+8775241 | None:intergenic |
| TCAAGATGGTTTGAGCAATG+GGG | 0.661840 | 1_3:+8775097 | None:intergenic |
| GGTAAAACACTGCCTCTGGG+CGG | 0.666677 | 1_3:+8774699 | None:intergenic |
| CACACATGGACCCCGCCCAG+AGG | 0.667182 | 1_3:-8774711 | Msa0102070:CDS |
| TCATCAGGTTCCTACTCCAG+AGG | 0.669086 | 1_3:-8774575 | Msa0102070:CDS |
| ATCCAGATAATCCCAAGTGT+AGG | 0.671116 | 1_3:+8774678 | None:intergenic |
| AGCTTGAGGTTGGTGTGACG+AGG | 0.672577 | 1_3:+8774756 | None:intergenic |
| CCAAGATGATCCGGACGCGG+TGG | 0.674962 | 1_3:-8774437 | Msa0102070:CDS |
| CGTCAACCGGTTGATCGGTG+AGG | 0.683528 | 1_3:+8774995 | None:intergenic |
| CGAACGCCATGCCTTTAGAG+GGG | 0.684578 | 1_3:-8775362 | Msa0102070:CDS |
| AGCTTCAAAACCATGATACG+GGG | 0.691193 | 1_3:-8775330 | Msa0102070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TTAGCTTCAAAACCATGATA+CGG | - | chr1_3:8774700-8774719 | Msa0102070:CDS | 30.0% | |
| !! | TTGTTTTGTTGAAGGTGAAA+TGG | + | chr1_3:8774810-8774829 | None:intergenic | 30.0% |
| TTTCACCTTCAACAAAACAA+AGG | - | chr1_3:8774810-8774829 | Msa0102070:CDS | 30.0% | |
| TTCACCTTCAACAAAACAAA+GGG | - | chr1_3:8774811-8774830 | Msa0102070:CDS | 30.0% | |
| !!! | AATTCCCTTTGTTTTGTTGA+AGG | + | chr1_3:8774818-8774837 | None:intergenic | 30.0% |
| TTCAACAAAACAAAGGGAAT+TGG | - | chr1_3:8774817-8774836 | Msa0102070:CDS | 30.0% | |
| TCAACAAAACAAAGGGAATT+GGG | - | chr1_3:8774818-8774837 | Msa0102070:CDS | 30.0% | |
| AATTCTTCATGAACATGGTT+CGG | + | chr1_3:8775179-8775198 | None:intergenic | 30.0% | |
| AAAGAGAAAAAGGGTAAGAA+AGG | - | chr1_3:8775242-8775261 | Msa0102070:CDS | 30.0% | |
| TTAGCTTCAAAACCATGATA+CGG | - | chr1_3:8774700-8774719 | Msa0102070:CDS | 30.0% | |
| !! | TTGTTTTGTTGAAGGTGAAA+TGG | + | chr1_3:8774810-8774829 | None:intergenic | 30.0% |
| TTTCACCTTCAACAAAACAA+AGG | - | chr1_3:8774810-8774829 | Msa0102070:CDS | 30.0% | |
| TTCACCTTCAACAAAACAAA+GGG | - | chr1_3:8774811-8774830 | Msa0102070:CDS | 30.0% | |
| !!! | AATTCCCTTTGTTTTGTTGA+AGG | + | chr1_3:8774818-8774837 | None:intergenic | 30.0% |
| TTCAACAAAACAAAGGGAAT+TGG | - | chr1_3:8774817-8774836 | Msa0102070:CDS | 30.0% | |
| TCAACAAAACAAAGGGAATT+GGG | - | chr1_3:8774818-8774837 | Msa0102070:CDS | 30.0% | |
| AATTCTTCATGAACATGGTT+CGG | + | chr1_3:8775179-8775198 | None:intergenic | 30.0% | |
| AAAGAGAAAAAGGGTAAGAA+AGG | - | chr1_3:8775242-8775261 | Msa0102070:CDS | 30.0% | |
| !! | GATGCTTTCTGTTGATTCTT+AGG | + | chr1_3:8774390-8774409 | None:intergenic | 35.0% |
| GTTTACATAGTTCGTGATAC+CGG | + | chr1_3:8774506-8774525 | None:intergenic | 35.0% | |
| GGTATCACGAACTATGTAAA+CGG | - | chr1_3:8774505-8774524 | Msa0102070:CDS | 35.0% | |
| AACTATGTAAACGGAAGCTT+TGG | - | chr1_3:8774514-8774533 | Msa0102070:CDS | 35.0% | |
| CATCATTCAGAAGCGAAAAT+GGG | - | chr1_3:8774590-8774609 | Msa0102070:CDS | 35.0% | |
| !! | CGATTTCAGTGTTGATTTGA+GGG | + | chr1_3:8774635-8774654 | None:intergenic | 35.0% |
| !! | ACGATTTCAGTGTTGATTTG+AGG | + | chr1_3:8774636-8774655 | None:intergenic | 35.0% |
| TAGCTTCAAAACCATGATAC+GGG | - | chr1_3:8774701-8774720 | Msa0102070:CDS | 35.0% | |
| ! | AAGGCATTAATGACTACCTT+GGG | - | chr1_3:8774748-8774767 | Msa0102070:CDS | 35.0% |
| !!! | TCAGGGTTTTTGAGTTTGTA+AGG | + | chr1_3:8774777-8774796 | None:intergenic | 35.0% |
| GAAATGGACAAAGTTCATCA+GGG | + | chr1_3:8774794-8774813 | None:intergenic | 35.0% | |
| TGAAATGGACAAAGTTCATC+AGG | + | chr1_3:8774795-8774814 | None:intergenic | 35.0% | |
| TGGTTGATTGAATGAGTGAA+TGG | + | chr1_3:8774845-8774864 | None:intergenic | 35.0% | |
| GGTCATGTTACACTTCTTAA+CGG | + | chr1_3:8774916-8774935 | None:intergenic | 35.0% | |
| TTCAAGATGGTTTGAGCAAT+GGG | + | chr1_3:8774939-8774958 | None:intergenic | 35.0% | |
| TTTCAAGATGGTTTGAGCAA+TGG | + | chr1_3:8774940-8774959 | None:intergenic | 35.0% | |
| GAACAGGATCAATTTCAAGA+TGG | + | chr1_3:8774952-8774971 | None:intergenic | 35.0% | |
| TCTTGGGTTTGATATTGAAC+AGG | + | chr1_3:8774968-8774987 | None:intergenic | 35.0% | |
| GATCATTGCTGAAGAACTAA+AGG | - | chr1_3:8775067-8775086 | Msa0102070:CDS | 35.0% | |
| ! | TTGCTTTAAGCAACAAAGAG+AGG | - | chr1_3:8775093-8775112 | Msa0102070:CDS | 35.0% |
| ! | TGCTTTAAGCAACAAAGAGA+GGG | - | chr1_3:8775094-8775113 | Msa0102070:CDS | 35.0% |
| ATCAATCCCATTATCAATCC+GGG | + | chr1_3:8775134-8775153 | None:intergenic | 35.0% | |
| GATCAATCCCATTATCAATC+CGG | + | chr1_3:8775135-8775154 | None:intergenic | 35.0% | |
| ATTCTTCATGAACATGGTTC+GGG | + | chr1_3:8775178-8775197 | None:intergenic | 35.0% | |
| TCTGCAATTCTTCATGAACA+TGG | + | chr1_3:8775184-8775203 | None:intergenic | 35.0% | |
| CACAGTGACAAAGAGAAAAA+GGG | - | chr1_3:8775233-8775252 | Msa0102070:CDS | 35.0% | |
| ! | AAAAAGGGTAAGAAAGGTAC+CGG | - | chr1_3:8775248-8775267 | Msa0102070:CDS | 35.0% |
| !! | GAGAAGTCATCAGTTGATAA+TGG | + | chr1_3:8775302-8775321 | None:intergenic | 35.0% |
| ATTATCTGGATGCTAACAAG+CGG | - | chr1_3:8775366-8775385 | Msa0102070:CDS | 35.0% | |
| AGTGCAACAAATTCAAGTGA+AGG | - | chr1_3:8775620-8775639 | Msa0102070:CDS | 35.0% | |
| !! | GATGCTTTCTGTTGATTCTT+AGG | + | chr1_3:8774390-8774409 | None:intergenic | 35.0% |
| GTTTACATAGTTCGTGATAC+CGG | + | chr1_3:8774506-8774525 | None:intergenic | 35.0% | |
| GGTATCACGAACTATGTAAA+CGG | - | chr1_3:8774505-8774524 | Msa0102070:CDS | 35.0% | |
| AACTATGTAAACGGAAGCTT+TGG | - | chr1_3:8774514-8774533 | Msa0102070:CDS | 35.0% | |
| CATCATTCAGAAGCGAAAAT+GGG | - | chr1_3:8774590-8774609 | Msa0102070:CDS | 35.0% | |
| !! | CGATTTCAGTGTTGATTTGA+GGG | + | chr1_3:8774635-8774654 | None:intergenic | 35.0% |
| !! | ACGATTTCAGTGTTGATTTG+AGG | + | chr1_3:8774636-8774655 | None:intergenic | 35.0% |
| TAGCTTCAAAACCATGATAC+GGG | - | chr1_3:8774701-8774720 | Msa0102070:CDS | 35.0% | |
| ! | AAGGCATTAATGACTACCTT+GGG | - | chr1_3:8774748-8774767 | Msa0102070:CDS | 35.0% |
| !!! | TCAGGGTTTTTGAGTTTGTA+AGG | + | chr1_3:8774777-8774796 | None:intergenic | 35.0% |
| GAAATGGACAAAGTTCATCA+GGG | + | chr1_3:8774794-8774813 | None:intergenic | 35.0% | |
| TGAAATGGACAAAGTTCATC+AGG | + | chr1_3:8774795-8774814 | None:intergenic | 35.0% | |
| TGGTTGATTGAATGAGTGAA+TGG | + | chr1_3:8774845-8774864 | None:intergenic | 35.0% | |
| GGTCATGTTACACTTCTTAA+CGG | + | chr1_3:8774916-8774935 | None:intergenic | 35.0% | |
| TTCAAGATGGTTTGAGCAAT+GGG | + | chr1_3:8774939-8774958 | None:intergenic | 35.0% | |
| TTTCAAGATGGTTTGAGCAA+TGG | + | chr1_3:8774940-8774959 | None:intergenic | 35.0% | |
| GAACAGGATCAATTTCAAGA+TGG | + | chr1_3:8774952-8774971 | None:intergenic | 35.0% | |
| TCTTGGGTTTGATATTGAAC+AGG | + | chr1_3:8774968-8774987 | None:intergenic | 35.0% | |
| GATCATTGCTGAAGAACTAA+AGG | - | chr1_3:8775067-8775086 | Msa0102070:CDS | 35.0% | |
| ! | TTGCTTTAAGCAACAAAGAG+AGG | - | chr1_3:8775093-8775112 | Msa0102070:CDS | 35.0% |
| ! | TGCTTTAAGCAACAAAGAGA+GGG | - | chr1_3:8775094-8775113 | Msa0102070:CDS | 35.0% |
| ATCAATCCCATTATCAATCC+GGG | + | chr1_3:8775134-8775153 | None:intergenic | 35.0% | |
| GATCAATCCCATTATCAATC+CGG | + | chr1_3:8775135-8775154 | None:intergenic | 35.0% | |
| ATTCTTCATGAACATGGTTC+GGG | + | chr1_3:8775178-8775197 | None:intergenic | 35.0% | |
| TCTGCAATTCTTCATGAACA+TGG | + | chr1_3:8775184-8775203 | None:intergenic | 35.0% | |
| CACAGTGACAAAGAGAAAAA+GGG | - | chr1_3:8775233-8775252 | Msa0102070:CDS | 35.0% | |
| ! | AAAAAGGGTAAGAAAGGTAC+CGG | - | chr1_3:8775248-8775267 | Msa0102070:CDS | 35.0% |
| !! | GAGAAGTCATCAGTTGATAA+TGG | + | chr1_3:8775302-8775321 | None:intergenic | 35.0% |
| ATTATCTGGATGCTAACAAG+CGG | - | chr1_3:8775366-8775385 | Msa0102070:CDS | 35.0% | |
| AGTGCAACAAATTCAAGTGA+AGG | - | chr1_3:8775620-8775639 | Msa0102070:CDS | 35.0% | |
| AAGAATCTGTGCTCGTCATA+AGG | + | chr1_3:8774465-8774484 | None:intergenic | 40.0% | |
| AGTTCCAAATCTCAGCTGAA+GGG | - | chr1_3:8774547-8774566 | Msa0102070:CDS | 40.0% | |
| ATTTCCCTTCAGCTGAGATT+TGG | + | chr1_3:8774554-8774573 | None:intergenic | 40.0% | |
| ! | CCATTTTCGCTTCTGAATGA+TGG | + | chr1_3:8774592-8774611 | None:intergenic | 40.0% |
| CCATCATTCAGAAGCGAAAA+TGG | - | chr1_3:8774589-8774608 | Msa0102070:CDS | 40.0% | |
| CTAAATTCTTCCCCCTCTAA+AGG | + | chr1_3:8774684-8774703 | None:intergenic | 40.0% | |
| AGCTTCAAAACCATGATACG+GGG | - | chr1_3:8774702-8774721 | Msa0102070:CDS | 40.0% | |
| ATTAATGCCTTGGCGATCAA+AGG | + | chr1_3:8774739-8774758 | None:intergenic | 40.0% | |
| CAAGGTAGTCATTAATGCCT+TGG | + | chr1_3:8774749-8774768 | None:intergenic | 40.0% | |
| ! | CAAGGCATTAATGACTACCT+TGG | - | chr1_3:8774747-8774766 | Msa0102070:CDS | 40.0% |
| TGAGTTTGTAAGGTTTCCCA+AGG | + | chr1_3:8774767-8774786 | None:intergenic | 40.0% | |
| TCAATCAACCATTCTGCAAC+CGG | - | chr1_3:8774854-8774873 | Msa0102070:CDS | 40.0% | |
| CTTGTTTCATATCCCTTTCC+CGG | + | chr1_3:8774876-8774895 | None:intergenic | 40.0% | |
| GGATATGAAACAAGTGTGAC+CGG | - | chr1_3:8774882-8774901 | Msa0102070:CDS | 40.0% | |
| GATATGAAACAAGTGTGACC+GGG | - | chr1_3:8774883-8774902 | Msa0102070:CDS | 40.0% | |
| TCAAGATGGTTTGAGCAATG+GGG | + | chr1_3:8774938-8774957 | None:intergenic | 40.0% | |
| TATCAATGGTGCAAGTGGAA+AGG | + | chr1_3:8774995-8775014 | None:intergenic | 40.0% | |
| !! | CATGGTTCGGGATTTTTATG+CGG | + | chr1_3:8775166-8775185 | None:intergenic | 40.0% |
| GCAATGATAGCATCAGTGAT+TGG | + | chr1_3:8775209-8775228 | None:intergenic | 40.0% | |
| TCACTGATGCTATCATTGCA+AGG | - | chr1_3:8775210-8775229 | Msa0102070:CDS | 40.0% | |
| GCACAGTGACAAAGAGAAAA+AGG | - | chr1_3:8775232-8775251 | Msa0102070:CDS | 40.0% | |
| !! | TTGATAATGGAGCTTGAGGT+TGG | + | chr1_3:8775289-8775308 | None:intergenic | 40.0% |
| !! | TCAGTTGATAATGGAGCTTG+AGG | + | chr1_3:8775293-8775312 | None:intergenic | 40.0% |
| AACTGATGACTTCTCACACA+TGG | - | chr1_3:8775307-8775326 | Msa0102070:CDS | 40.0% | |
| ! | GCAGTGTTTTACCTACACTT+GGG | - | chr1_3:8775343-8775362 | Msa0102070:CDS | 40.0% |
| TACCTACACTTGGGATTATC+TGG | - | chr1_3:8775352-8775371 | Msa0102070:CDS | 40.0% | |
| ATCCAGATAATCCCAAGTGT+AGG | + | chr1_3:8775357-8775376 | None:intergenic | 40.0% | |
| TTATCTGGATGCTAACAAGC+GGG | - | chr1_3:8775367-8775386 | Msa0102070:CDS | 40.0% | |
| CATTGCATGACTCTATGTAC+CGG | - | chr1_3:8775399-8775418 | Msa0102070:CDS | 40.0% | |
| CATACAAGGCTTATTGTGCT+TGG | - | chr1_3:8775480-8775499 | Msa0102070:CDS | 40.0% | |
| TGGTGGTTCTTCATTTATGC+AGG | - | chr1_3:8775535-8775554 | Msa0102070:CDS | 40.0% | |
| AACTCTTGCTCCTCATAACT+CGG | + | chr1_3:8775650-8775669 | None:intergenic | 40.0% | |
| AAGAATCTGTGCTCGTCATA+AGG | + | chr1_3:8774465-8774484 | None:intergenic | 40.0% | |
| AGTTCCAAATCTCAGCTGAA+GGG | - | chr1_3:8774547-8774566 | Msa0102070:CDS | 40.0% | |
| ATTTCCCTTCAGCTGAGATT+TGG | + | chr1_3:8774554-8774573 | None:intergenic | 40.0% | |
| ! | CCATTTTCGCTTCTGAATGA+TGG | + | chr1_3:8774592-8774611 | None:intergenic | 40.0% |
| CCATCATTCAGAAGCGAAAA+TGG | - | chr1_3:8774589-8774608 | Msa0102070:CDS | 40.0% | |
| CTAAATTCTTCCCCCTCTAA+AGG | + | chr1_3:8774684-8774703 | None:intergenic | 40.0% | |
| AGCTTCAAAACCATGATACG+GGG | - | chr1_3:8774702-8774721 | Msa0102070:CDS | 40.0% | |
| ATTAATGCCTTGGCGATCAA+AGG | + | chr1_3:8774739-8774758 | None:intergenic | 40.0% | |
| CAAGGTAGTCATTAATGCCT+TGG | + | chr1_3:8774749-8774768 | None:intergenic | 40.0% | |
| ! | CAAGGCATTAATGACTACCT+TGG | - | chr1_3:8774747-8774766 | Msa0102070:CDS | 40.0% |
| TGAGTTTGTAAGGTTTCCCA+AGG | + | chr1_3:8774767-8774786 | None:intergenic | 40.0% | |
| TCAATCAACCATTCTGCAAC+CGG | - | chr1_3:8774854-8774873 | Msa0102070:CDS | 40.0% | |
| CTTGTTTCATATCCCTTTCC+CGG | + | chr1_3:8774876-8774895 | None:intergenic | 40.0% | |
| GGATATGAAACAAGTGTGAC+CGG | - | chr1_3:8774882-8774901 | Msa0102070:CDS | 40.0% | |
| GATATGAAACAAGTGTGACC+GGG | - | chr1_3:8774883-8774902 | Msa0102070:CDS | 40.0% | |
| TCAAGATGGTTTGAGCAATG+GGG | + | chr1_3:8774938-8774957 | None:intergenic | 40.0% | |
| TATCAATGGTGCAAGTGGAA+AGG | + | chr1_3:8774995-8775014 | None:intergenic | 40.0% | |
| !! | CATGGTTCGGGATTTTTATG+CGG | + | chr1_3:8775166-8775185 | None:intergenic | 40.0% |
| GCAATGATAGCATCAGTGAT+TGG | + | chr1_3:8775209-8775228 | None:intergenic | 40.0% | |
| TCACTGATGCTATCATTGCA+AGG | - | chr1_3:8775210-8775229 | Msa0102070:CDS | 40.0% | |
| GCACAGTGACAAAGAGAAAA+AGG | - | chr1_3:8775232-8775251 | Msa0102070:CDS | 40.0% | |
| !! | TTGATAATGGAGCTTGAGGT+TGG | + | chr1_3:8775289-8775308 | None:intergenic | 40.0% |
| !! | TCAGTTGATAATGGAGCTTG+AGG | + | chr1_3:8775293-8775312 | None:intergenic | 40.0% |
| AACTGATGACTTCTCACACA+TGG | - | chr1_3:8775307-8775326 | Msa0102070:CDS | 40.0% | |
| ! | GCAGTGTTTTACCTACACTT+GGG | - | chr1_3:8775343-8775362 | Msa0102070:CDS | 40.0% |
| TACCTACACTTGGGATTATC+TGG | - | chr1_3:8775352-8775371 | Msa0102070:CDS | 40.0% | |
| ATCCAGATAATCCCAAGTGT+AGG | + | chr1_3:8775357-8775376 | None:intergenic | 40.0% | |
| TTATCTGGATGCTAACAAGC+GGG | - | chr1_3:8775367-8775386 | Msa0102070:CDS | 40.0% | |
| CATTGCATGACTCTATGTAC+CGG | - | chr1_3:8775399-8775418 | Msa0102070:CDS | 40.0% | |
| CATACAAGGCTTATTGTGCT+TGG | - | chr1_3:8775480-8775499 | Msa0102070:CDS | 40.0% | |
| TGGTGGTTCTTCATTTATGC+AGG | - | chr1_3:8775535-8775554 | Msa0102070:CDS | 40.0% | |
| AACTCTTGCTCCTCATAACT+CGG | + | chr1_3:8775650-8775669 | None:intergenic | 40.0% | |
| AGATTGCTTTCTCTTGCCTC+TGG | + | chr1_3:8774421-8774440 | None:intergenic | 45.0% | |
| TCGTCATAAGGTCTTGGAGT+CGG | + | chr1_3:8774453-8774472 | None:intergenic | 45.0% | |
| ATTCTTCACTGTTGCTCACC+AGG | - | chr1_3:8774479-8774498 | Msa0102070:CDS | 45.0% | |
| CAGTTCCAAATCTCAGCTGA+AGG | - | chr1_3:8774546-8774565 | Msa0102070:CDS | 45.0% | |
| GAAGCGAAAATGGGAACAAC+TGG | - | chr1_3:8774599-8774618 | Msa0102070:CDS | 45.0% | |
| !! | AGTGTTGATTTGAGGGTGAG+GGG | + | chr1_3:8774628-8774647 | None:intergenic | 45.0% |
| !! | CAGTGTTGATTTGAGGGTGA+GGG | + | chr1_3:8774629-8774648 | None:intergenic | 45.0% |
| !! | TCAGTGTTGATTTGAGGGTG+AGG | + | chr1_3:8774630-8774649 | None:intergenic | 45.0% |
| TCAAAACCATGATACGGGGT+AGG | - | chr1_3:8774706-8774725 | Msa0102070:CDS | 45.0% | |
| CAAAACCATGATACGGGGTA+GGG | - | chr1_3:8774707-8774726 | Msa0102070:CDS | 45.0% | |
| CAATCAACCATTCTGCAACC+GGG | - | chr1_3:8774855-8774874 | Msa0102070:CDS | 45.0% | |
| CAAGATGGTTTGAGCAATGG+GGG | + | chr1_3:8774937-8774956 | None:intergenic | 45.0% | |
| TGGGATATCAATGGTGCAAG+TGG | + | chr1_3:8775000-8775019 | None:intergenic | 45.0% | |
| GTGAGGATGTAGTAGATGAG+GGG | + | chr1_3:8775023-8775042 | None:intergenic | 45.0% | |
| GGTGAGGATGTAGTAGATGA+GGG | + | chr1_3:8775024-8775043 | None:intergenic | 45.0% | |
| TCAATCCGGGAAAGGCTAAA+GGG | + | chr1_3:8775121-8775140 | None:intergenic | 45.0% | |
| ATCAATCCGGGAAAGGCTAA+AGG | + | chr1_3:8775122-8775141 | None:intergenic | 45.0% | |
| AGCCTTTCCCGGATTGATAA+TGG | - | chr1_3:8775124-8775143 | Msa0102070:CDS | 45.0% | |
| ! | GCCTTTCCCGGATTGATAAT+GGG | - | chr1_3:8775125-8775144 | Msa0102070:CDS | 45.0% |
| TCCCATTATCAATCCGGGAA+AGG | + | chr1_3:8775129-8775148 | None:intergenic | 45.0% | |
| GTAGGTAAAACACTGCCTCT+GGG | + | chr1_3:8775339-8775358 | None:intergenic | 45.0% | |
| TGTAGGTAAAACACTGCCTC+TGG | + | chr1_3:8775340-8775359 | None:intergenic | 45.0% | |
| ! | GGCAGTGTTTTACCTACACT+TGG | - | chr1_3:8775342-8775361 | Msa0102070:CDS | 45.0% |
| ATCTGCTATCTGTGGGTAAC+CGG | + | chr1_3:8775438-8775457 | None:intergenic | 45.0% | |
| CCTGATGATCTGCTATCTGT+GGG | + | chr1_3:8775445-8775464 | None:intergenic | 45.0% | |
| ACCTGATGATCTGCTATCTG+TGG | + | chr1_3:8775446-8775465 | None:intergenic | 45.0% | |
| ! | CAATAAGCCTTGTATGCCTC+TGG | + | chr1_3:8775476-8775495 | None:intergenic | 45.0% |
| GGGACAGGCCATTTATCTAT+GGG | - | chr1_3:8775507-8775526 | Msa0102070:CDS | 45.0% | |
| GGACAGGCCATTTATCTATG+GGG | - | chr1_3:8775508-8775527 | Msa0102070:CDS | 45.0% | |
| GACAGGCCATTTATCTATGG+GGG | - | chr1_3:8775509-8775528 | Msa0102070:CDS | 45.0% | |
| ACAGGCCATTTATCTATGGG+GGG | - | chr1_3:8775510-8775529 | Msa0102070:CDS | 45.0% | |
| TAGAGCAGACCAAGATGATC+CGG | - | chr1_3:8775586-8775605 | Msa0102070:CDS | 45.0% | |
| AGATTGCTTTCTCTTGCCTC+TGG | + | chr1_3:8774421-8774440 | None:intergenic | 45.0% | |
| TCGTCATAAGGTCTTGGAGT+CGG | + | chr1_3:8774453-8774472 | None:intergenic | 45.0% | |
| ATTCTTCACTGTTGCTCACC+AGG | - | chr1_3:8774479-8774498 | Msa0102070:CDS | 45.0% | |
| CAGTTCCAAATCTCAGCTGA+AGG | - | chr1_3:8774546-8774565 | Msa0102070:CDS | 45.0% | |
| GAAGCGAAAATGGGAACAAC+TGG | - | chr1_3:8774599-8774618 | Msa0102070:CDS | 45.0% | |
| !! | AGTGTTGATTTGAGGGTGAG+GGG | + | chr1_3:8774628-8774647 | None:intergenic | 45.0% |
| !! | CAGTGTTGATTTGAGGGTGA+GGG | + | chr1_3:8774629-8774648 | None:intergenic | 45.0% |
| !! | TCAGTGTTGATTTGAGGGTG+AGG | + | chr1_3:8774630-8774649 | None:intergenic | 45.0% |
| TCAAAACCATGATACGGGGT+AGG | - | chr1_3:8774706-8774725 | Msa0102070:CDS | 45.0% | |
| CAAAACCATGATACGGGGTA+GGG | - | chr1_3:8774707-8774726 | Msa0102070:CDS | 45.0% | |
| CAATCAACCATTCTGCAACC+GGG | - | chr1_3:8774855-8774874 | Msa0102070:CDS | 45.0% | |
| CAAGATGGTTTGAGCAATGG+GGG | + | chr1_3:8774937-8774956 | None:intergenic | 45.0% | |
| TGGGATATCAATGGTGCAAG+TGG | + | chr1_3:8775000-8775019 | None:intergenic | 45.0% | |
| GTGAGGATGTAGTAGATGAG+GGG | + | chr1_3:8775023-8775042 | None:intergenic | 45.0% | |
| GGTGAGGATGTAGTAGATGA+GGG | + | chr1_3:8775024-8775043 | None:intergenic | 45.0% | |
| TCAATCCGGGAAAGGCTAAA+GGG | + | chr1_3:8775121-8775140 | None:intergenic | 45.0% | |
| ATCAATCCGGGAAAGGCTAA+AGG | + | chr1_3:8775122-8775141 | None:intergenic | 45.0% | |
| AGCCTTTCCCGGATTGATAA+TGG | - | chr1_3:8775124-8775143 | Msa0102070:CDS | 45.0% | |
| ! | GCCTTTCCCGGATTGATAAT+GGG | - | chr1_3:8775125-8775144 | Msa0102070:CDS | 45.0% |
| TCCCATTATCAATCCGGGAA+AGG | + | chr1_3:8775129-8775148 | None:intergenic | 45.0% | |
| GTAGGTAAAACACTGCCTCT+GGG | + | chr1_3:8775339-8775358 | None:intergenic | 45.0% | |
| TGTAGGTAAAACACTGCCTC+TGG | + | chr1_3:8775340-8775359 | None:intergenic | 45.0% | |
| ! | GGCAGTGTTTTACCTACACT+TGG | - | chr1_3:8775342-8775361 | Msa0102070:CDS | 45.0% |
| ATCTGCTATCTGTGGGTAAC+CGG | + | chr1_3:8775438-8775457 | None:intergenic | 45.0% | |
| CCTGATGATCTGCTATCTGT+GGG | + | chr1_3:8775445-8775464 | None:intergenic | 45.0% | |
| ACCTGATGATCTGCTATCTG+TGG | + | chr1_3:8775446-8775465 | None:intergenic | 45.0% | |
| ! | CAATAAGCCTTGTATGCCTC+TGG | + | chr1_3:8775476-8775495 | None:intergenic | 45.0% |
| GGGACAGGCCATTTATCTAT+GGG | - | chr1_3:8775507-8775526 | Msa0102070:CDS | 45.0% | |
| GGACAGGCCATTTATCTATG+GGG | - | chr1_3:8775508-8775527 | Msa0102070:CDS | 45.0% | |
| GACAGGCCATTTATCTATGG+GGG | - | chr1_3:8775509-8775528 | Msa0102070:CDS | 45.0% | |
| ACAGGCCATTTATCTATGGG+GGG | - | chr1_3:8775510-8775529 | Msa0102070:CDS | 45.0% | |
| TAGAGCAGACCAAGATGATC+CGG | - | chr1_3:8775586-8775605 | Msa0102070:CDS | 45.0% | |
| ! | AAAGCATCAGCTTCTGCCAG+AGG | - | chr1_3:8774402-8774421 | Msa0102070:CDS | 50.0% |
| CTGTGCTCGTCATAAGGTCT+TGG | + | chr1_3:8774459-8774478 | None:intergenic | 50.0% | |
| ATAGTTCGTGATACCGGTCC+TGG | + | chr1_3:8774500-8774519 | None:intergenic | 50.0% | |
| ! | TTCTTCCCCCTCTAAAGGCA+TGG | + | chr1_3:8774679-8774698 | None:intergenic | 50.0% |
| GTGATCACCTTTGATCGCCA+AGG | - | chr1_3:8774729-8774748 | Msa0102070:CDS | 50.0% | |
| AACCATTCTGCAACCGGGAA+AGG | - | chr1_3:8774860-8774879 | Msa0102070:CDS | 50.0% | |
| ACCATTCTGCAACCGGGAAA+GGG | - | chr1_3:8774861-8774880 | Msa0102070:CDS | 50.0% | |
| CTTCTTAACGGTATCACGCC+CGG | + | chr1_3:8774904-8774923 | None:intergenic | 50.0% | |
| CAAGTGGAAAGGTGGCTCTT+GGG | + | chr1_3:8774984-8775003 | None:intergenic | 50.0% | |
| CAATGGTGCAAGTGGAAAGG+TGG | + | chr1_3:8774992-8775011 | None:intergenic | 50.0% | |
| GATGAGGGGTGGGATATCAA+TGG | + | chr1_3:8775009-8775028 | None:intergenic | 50.0% | |
| GGATGTAGTAGATGAGGGGT+GGG | + | chr1_3:8775019-8775038 | None:intergenic | 50.0% | |
| AGGATGTAGTAGATGAGGGG+TGG | + | chr1_3:8775020-8775039 | None:intergenic | 50.0% | |
| CGGTGAGGATGTAGTAGATG+AGG | + | chr1_3:8775025-8775044 | None:intergenic | 50.0% | |
| CTACATCCTCACCGATCAAC+CGG | - | chr1_3:8775031-8775050 | Msa0102070:CDS | 50.0% | |
| ATGATCCTCGCAACGTCAAC+CGG | + | chr1_3:8775053-8775072 | None:intergenic | 50.0% | |
| ! | GGTTCGGGATTTTTATGCGG+AGG | + | chr1_3:8775163-8775182 | None:intergenic | 50.0% |
| TTGGTGTGACGAGGAAGTTC+CGG | + | chr1_3:8775270-8775289 | None:intergenic | 50.0% | |
| CCCACAGATAGCAGATCATC+AGG | - | chr1_3:8775442-8775461 | Msa0102070:CDS | 50.0% | |
| TCATCAGGTTCCTACTCCAG+AGG | - | chr1_3:8775457-8775476 | Msa0102070:CDS | 50.0% | |
| ! | TCCTACTCCAGAGGCATACA+AGG | - | chr1_3:8775466-8775485 | Msa0102070:CDS | 50.0% |
| AAGGCTTATTGTGCTTGGCC+TGG | - | chr1_3:8775485-8775504 | Msa0102070:CDS | 50.0% | |
| AGGCTTATTGTGCTTGGCCT+GGG | - | chr1_3:8775486-8775505 | Msa0102070:CDS | 50.0% | |
| TAGATAAATGGCCTGTCCCC+AGG | + | chr1_3:8775506-8775525 | None:intergenic | 50.0% | |
| GGGGACAGGCCATTTATCTA+TGG | - | chr1_3:8775506-8775525 | Msa0102070:CDS | 50.0% | |
| CAGGCCATTTATCTATGGGG+GGG | - | chr1_3:8775511-8775530 | Msa0102070:CDS | 50.0% | |
| CCATCCCCCCCATAGATAAA+TGG | + | chr1_3:8775518-8775537 | None:intergenic | 50.0% | |
| CCATTTATCTATGGGGGGGA+TGG | - | chr1_3:8775515-8775534 | Msa0102070:CDS | 50.0% | |
| TTTATCTATGGGGGGGATGG+TGG | - | chr1_3:8775518-8775537 | Msa0102070:CDS | 50.0% | |
| TGAGCCAGCAGATGATGATC+AGG | - | chr1_3:8775562-8775581 | Msa0102070:CDS | 50.0% | |
| GAGCCAGCAGATGATGATCA+GGG | - | chr1_3:8775563-8775582 | Msa0102070:CDS | 50.0% | |
| CTACCCTGATCATCATCTGC+TGG | + | chr1_3:8775569-8775588 | None:intergenic | 50.0% | |
| !! | TGAAGGCACTCCGAGTTATG+AGG | - | chr1_3:8775637-8775656 | Msa0102070:CDS | 50.0% |
| ! | AAAGCATCAGCTTCTGCCAG+AGG | - | chr1_3:8774402-8774421 | Msa0102070:CDS | 50.0% |
| CTGTGCTCGTCATAAGGTCT+TGG | + | chr1_3:8774459-8774478 | None:intergenic | 50.0% | |
| ATAGTTCGTGATACCGGTCC+TGG | + | chr1_3:8774500-8774519 | None:intergenic | 50.0% | |
| ! | TTCTTCCCCCTCTAAAGGCA+TGG | + | chr1_3:8774679-8774698 | None:intergenic | 50.0% |
| GTGATCACCTTTGATCGCCA+AGG | - | chr1_3:8774729-8774748 | Msa0102070:CDS | 50.0% | |
| AACCATTCTGCAACCGGGAA+AGG | - | chr1_3:8774860-8774879 | Msa0102070:CDS | 50.0% | |
| ACCATTCTGCAACCGGGAAA+GGG | - | chr1_3:8774861-8774880 | Msa0102070:CDS | 50.0% | |
| CTTCTTAACGGTATCACGCC+CGG | + | chr1_3:8774904-8774923 | None:intergenic | 50.0% | |
| CAAGTGGAAAGGTGGCTCTT+GGG | + | chr1_3:8774984-8775003 | None:intergenic | 50.0% | |
| CAATGGTGCAAGTGGAAAGG+TGG | + | chr1_3:8774992-8775011 | None:intergenic | 50.0% | |
| GATGAGGGGTGGGATATCAA+TGG | + | chr1_3:8775009-8775028 | None:intergenic | 50.0% | |
| GGATGTAGTAGATGAGGGGT+GGG | + | chr1_3:8775019-8775038 | None:intergenic | 50.0% | |
| AGGATGTAGTAGATGAGGGG+TGG | + | chr1_3:8775020-8775039 | None:intergenic | 50.0% | |
| CGGTGAGGATGTAGTAGATG+AGG | + | chr1_3:8775025-8775044 | None:intergenic | 50.0% | |
| CTACATCCTCACCGATCAAC+CGG | - | chr1_3:8775031-8775050 | Msa0102070:CDS | 50.0% | |
| ATGATCCTCGCAACGTCAAC+CGG | + | chr1_3:8775053-8775072 | None:intergenic | 50.0% | |
| ! | GGTTCGGGATTTTTATGCGG+AGG | + | chr1_3:8775163-8775182 | None:intergenic | 50.0% |
| TTGGTGTGACGAGGAAGTTC+CGG | + | chr1_3:8775270-8775289 | None:intergenic | 50.0% | |
| CCCACAGATAGCAGATCATC+AGG | - | chr1_3:8775442-8775461 | Msa0102070:CDS | 50.0% | |
| TCATCAGGTTCCTACTCCAG+AGG | - | chr1_3:8775457-8775476 | Msa0102070:CDS | 50.0% | |
| ! | TCCTACTCCAGAGGCATACA+AGG | - | chr1_3:8775466-8775485 | Msa0102070:CDS | 50.0% |
| AAGGCTTATTGTGCTTGGCC+TGG | - | chr1_3:8775485-8775504 | Msa0102070:CDS | 50.0% | |
| AGGCTTATTGTGCTTGGCCT+GGG | - | chr1_3:8775486-8775505 | Msa0102070:CDS | 50.0% | |
| TAGATAAATGGCCTGTCCCC+AGG | + | chr1_3:8775506-8775525 | None:intergenic | 50.0% | |
| GGGGACAGGCCATTTATCTA+TGG | - | chr1_3:8775506-8775525 | Msa0102070:CDS | 50.0% | |
| CAGGCCATTTATCTATGGGG+GGG | - | chr1_3:8775511-8775530 | Msa0102070:CDS | 50.0% | |
| CCATCCCCCCCATAGATAAA+TGG | + | chr1_3:8775518-8775537 | None:intergenic | 50.0% | |
| CCATTTATCTATGGGGGGGA+TGG | - | chr1_3:8775515-8775534 | Msa0102070:CDS | 50.0% | |
| TTTATCTATGGGGGGGATGG+TGG | - | chr1_3:8775518-8775537 | Msa0102070:CDS | 50.0% | |
| TGAGCCAGCAGATGATGATC+AGG | - | chr1_3:8775562-8775581 | Msa0102070:CDS | 50.0% | |
| GAGCCAGCAGATGATGATCA+GGG | - | chr1_3:8775563-8775582 | Msa0102070:CDS | 50.0% | |
| CTACCCTGATCATCATCTGC+TGG | + | chr1_3:8775569-8775588 | None:intergenic | 50.0% | |
| !! | TGAAGGCACTCCGAGTTATG+AGG | - | chr1_3:8775637-8775656 | Msa0102070:CDS | 50.0% |
| TCACTGTTGCTCACCAGGAC+CGG | - | chr1_3:8774484-8774503 | Msa0102070:CDS | 55.0% | |
| TGCGAACGCCATGCCTTTAG+AGG | - | chr1_3:8774668-8774687 | Msa0102070:CDS | 55.0% | |
| GCGAACGCCATGCCTTTAGA+GGG | - | chr1_3:8774669-8774688 | Msa0102070:CDS | 55.0% | |
| ! | CGAACGCCATGCCTTTAGAG+GGG | - | chr1_3:8774670-8774689 | Msa0102070:CDS | 55.0% |
| ! | GAACGCCATGCCTTTAGAGG+GGG | - | chr1_3:8774671-8774690 | Msa0102070:CDS | 55.0% |
| GATCACCCTACCCCGTATCA+TGG | + | chr1_3:8774715-8774734 | None:intergenic | 55.0% | |
| TCCCTTTCCCGGTTGCAGAA+TGG | + | chr1_3:8774865-8774884 | None:intergenic | 55.0% | |
| GCAAGTGGAAAGGTGGCTCT+TGG | + | chr1_3:8774985-8775004 | None:intergenic | 55.0% | |
| CGCAACGTCAACCGGTTGAT+CGG | + | chr1_3:8775045-8775064 | None:intergenic | 55.0% | |
| ATCAACCGGTTGACGTTGCG+AGG | - | chr1_3:8775045-8775064 | Msa0102070:CDS | 55.0% | |
| ! | AGGGTCCCTTTAGCCTTTCC+CGG | - | chr1_3:8775113-8775132 | Msa0102070:CDS | 55.0% |
| !! | AGCTTGAGGTTGGTGTGACG+AGG | + | chr1_3:8775279-8775298 | None:intergenic | 55.0% |
| TAAAACACTGCCTCTGGGCG+GGG | + | chr1_3:8775334-8775353 | None:intergenic | 55.0% | |
| GTAAAACACTGCCTCTGGGC+GGG | + | chr1_3:8775335-8775354 | None:intergenic | 55.0% | |
| GGTAAAACACTGCCTCTGGG+CGG | + | chr1_3:8775336-8775355 | None:intergenic | 55.0% | |
| !! | GCCTTGTATGCCTCTGGAGT+AGG | + | chr1_3:8775470-8775489 | None:intergenic | 55.0% |
| GGCTTATTGTGCTTGGCCTG+GGG | - | chr1_3:8775487-8775506 | Msa0102070:CDS | 55.0% | |
| AGACCAAGATGATCCGGACG+CGG | - | chr1_3:8775592-8775611 | Msa0102070:CDS | 55.0% | |
| TCACTGTTGCTCACCAGGAC+CGG | - | chr1_3:8774484-8774503 | Msa0102070:CDS | 55.0% | |
| TGCGAACGCCATGCCTTTAG+AGG | - | chr1_3:8774668-8774687 | Msa0102070:CDS | 55.0% | |
| GCGAACGCCATGCCTTTAGA+GGG | - | chr1_3:8774669-8774688 | Msa0102070:CDS | 55.0% | |
| ! | CGAACGCCATGCCTTTAGAG+GGG | - | chr1_3:8774670-8774689 | Msa0102070:CDS | 55.0% |
| ! | GAACGCCATGCCTTTAGAGG+GGG | - | chr1_3:8774671-8774690 | Msa0102070:CDS | 55.0% |
| GATCACCCTACCCCGTATCA+TGG | + | chr1_3:8774715-8774734 | None:intergenic | 55.0% | |
| TCCCTTTCCCGGTTGCAGAA+TGG | + | chr1_3:8774865-8774884 | None:intergenic | 55.0% | |
| GCAAGTGGAAAGGTGGCTCT+TGG | + | chr1_3:8774985-8775004 | None:intergenic | 55.0% | |
| CGCAACGTCAACCGGTTGAT+CGG | + | chr1_3:8775045-8775064 | None:intergenic | 55.0% | |
| ATCAACCGGTTGACGTTGCG+AGG | - | chr1_3:8775045-8775064 | Msa0102070:CDS | 55.0% | |
| ! | AGGGTCCCTTTAGCCTTTCC+CGG | - | chr1_3:8775113-8775132 | Msa0102070:CDS | 55.0% |
| !! | AGCTTGAGGTTGGTGTGACG+AGG | + | chr1_3:8775279-8775298 | None:intergenic | 55.0% |
| TAAAACACTGCCTCTGGGCG+GGG | + | chr1_3:8775334-8775353 | None:intergenic | 55.0% | |
| GTAAAACACTGCCTCTGGGC+GGG | + | chr1_3:8775335-8775354 | None:intergenic | 55.0% | |
| GGTAAAACACTGCCTCTGGG+CGG | + | chr1_3:8775336-8775355 | None:intergenic | 55.0% | |
| !! | GCCTTGTATGCCTCTGGAGT+AGG | + | chr1_3:8775470-8775489 | None:intergenic | 55.0% |
| GGCTTATTGTGCTTGGCCTG+GGG | - | chr1_3:8775487-8775506 | Msa0102070:CDS | 55.0% | |
| AGACCAAGATGATCCGGACG+CGG | - | chr1_3:8775592-8775611 | Msa0102070:CDS | 55.0% | |
| CGTCAACCGGTTGATCGGTG+AGG | + | chr1_3:8775040-8775059 | None:intergenic | 60.0% | |
| TACCGGATGCAGCTGCATGC+CGG | - | chr1_3:8775416-8775435 | Msa0102070:CDS | 60.0% | |
| AACCGGCATGCAGCTGCATC+CGG | + | chr1_3:8775421-8775440 | None:intergenic | 60.0% | |
| ATTGTGCTTGGCCTGGGGAC+AGG | - | chr1_3:8775492-8775511 | Msa0102070:CDS | 60.0% | |
| CGTCAACCGGTTGATCGGTG+AGG | + | chr1_3:8775040-8775059 | None:intergenic | 60.0% | |
| TACCGGATGCAGCTGCATGC+CGG | - | chr1_3:8775416-8775435 | Msa0102070:CDS | 60.0% | |
| AACCGGCATGCAGCTGCATC+CGG | + | chr1_3:8775421-8775440 | None:intergenic | 60.0% | |
| ATTGTGCTTGGCCTGGGGAC+AGG | - | chr1_3:8775492-8775511 | Msa0102070:CDS | 60.0% | |
| CCACCGCGTCCGGATCATCT+TGG | + | chr1_3:8775598-8775617 | None:intergenic | 65.0% | |
| CCAAGATGATCCGGACGCGG+TGG | - | chr1_3:8775595-8775614 | Msa0102070:CDS | 65.0% | |
| GTTGCACTCACCACCGCGTC+CGG | + | chr1_3:8775608-8775627 | None:intergenic | 65.0% | |
| CCACCGCGTCCGGATCATCT+TGG | + | chr1_3:8775598-8775617 | None:intergenic | 65.0% | |
| CCAAGATGATCCGGACGCGG+TGG | - | chr1_3:8775595-8775614 | Msa0102070:CDS | 65.0% | |
| GTTGCACTCACCACCGCGTC+CGG | + | chr1_3:8775608-8775627 | None:intergenic | 65.0% | |
| CACACATGGACCCCGCCCAG+AGG | - | chr1_3:8775321-8775340 | Msa0102070:CDS | 70.0% | |
| CACACATGGACCCCGCCCAG+AGG | - | chr1_3:8775321-8775340 | Msa0102070:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 8774381 | 8775673 | 8774381 | ID=Msa0102070;Name=Msa0102070 |
| chr1_3 | mRNA | 8774381 | 8775673 | 8774381 | ID=Msa0102070-mRNA-1;Parent=Msa0102070;Name=Msa0102070-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|430 |
| chr1_3 | exon | 8774381 | 8775673 | 8774381 | ID=Msa0102070-mRNA-1:exon:3500;Parent=Msa0102070-mRNA-1 |
| chr1_3 | CDS | 8774381 | 8775673 | 8774381 | ID=Msa0102070-mRNA-1:cds;Parent=Msa0102070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
