Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0360510 | AES70281.2 | 67.847 | 339 | 59 | 4 | 150 | 454 | 40 | 362 | 2.65e-147 | 434 |
Msa0360510 | AES70281.2 | 79.747 | 158 | 24 | 2 | 1 | 150 | 1 | 158 | 7.93e-78 | 257 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0360510 | sp|Q7XTT4|NUCL2_ORYSJ | 47.101 | 138 | 70 | 3 | 311 | 446 | 412 | 548 | 2.56e-31 | 130 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0360510 | G7J1Z7 | 67.847 | 339 | 59 | 4 | 150 | 454 | 40 | 362 | 1.26e-147 | 434 |
Msa0360510 | G7J1Z7 | 79.747 | 158 | 24 | 2 | 1 | 150 | 1 | 158 | 3.79e-78 | 257 |
Gene ID | Type | Classification |
---|---|---|
Msa0360510 | TR | GNAT |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0013750 | Msa0360510 | 0.846599 | 1.963573e-59 | -8.615850e-47 |
Msa0014330 | Msa0360510 | 0.802635 | 5.108729e-49 | -8.615850e-47 |
Msa0015750 | Msa0360510 | 0.858979 | 5.679450e-63 | -8.615850e-47 |
Msa0016570 | Msa0360510 | 0.866031 | 3.837486e-65 | -8.615850e-47 |
Msa0016580 | Msa0360510 | 0.841943 | 3.496565e-58 | -8.615850e-47 |
Msa0028380 | Msa0360510 | 0.816289 | 5.972434e-52 | -8.615850e-47 |
Msa0028480 | Msa0360510 | 0.804940 | 1.697055e-49 | -8.615850e-47 |
Msa0064970 | Msa0360510 | 0.823845 | 1.111981e-53 | -8.615850e-47 |
Msa0092630 | Msa0360510 | 0.807722 | 4.400487e-50 | -8.615850e-47 |
Msa0102070 | Msa0360510 | 0.909172 | 7.640819e-82 | -8.615850e-47 |
Msa0110260 | Msa0360510 | 0.802841 | 4.633300e-49 | -8.615850e-47 |
Msa0110270 | Msa0360510 | 0.832483 | 9.211324e-56 | -8.615850e-47 |
Msa0111510 | Msa0360510 | 0.819113 | 1.377204e-52 | -8.615850e-47 |
Msa0123810 | Msa0360510 | 0.810895 | 9.180397e-51 | -8.615850e-47 |
Msa0124100 | Msa0360510 | 0.863327 | 2.694584e-64 | -8.615850e-47 |
Msa0124150 | Msa0360510 | 0.839835 | 1.249229e-57 | -8.615850e-47 |
Msa0142220 | Msa0360510 | 0.874323 | 7.386858e-68 | -8.615850e-47 |
Msa0145750 | Msa0360510 | 0.839521 | 1.507341e-57 | -8.615850e-47 |
Msa0153910 | Msa0360510 | 0.829936 | 3.894250e-55 | -8.615850e-47 |
Msa0159720 | Msa0360510 | 0.806618 | 7.538460e-50 | -8.615850e-47 |
Msa0165190 | Msa0360510 | 0.804401 | 2.199025e-49 | -8.615850e-47 |
Msa0197010 | Msa0360510 | 0.808305 | 3.305655e-50 | -8.615850e-47 |
Msa0200000 | Msa0360510 | 0.833951 | 3.969984e-56 | -8.615850e-47 |
Msa0227480 | Msa0360510 | 0.915670 | 4.467932e-85 | -8.615850e-47 |
Msa0231000 | Msa0360510 | 0.854981 | 8.565076e-62 | -8.615850e-47 |
Msa0232850 | Msa0360510 | 0.842178 | 3.029890e-58 | -8.615850e-47 |
Msa0235140 | Msa0360510 | 0.831428 | 1.678345e-55 | -8.615850e-47 |
Msa0247260 | Msa0360510 | 0.815468 | 9.104711e-52 | -8.615850e-47 |
Msa0251320 | Msa0360510 | 0.804015 | 2.645970e-49 | -8.615850e-47 |
Msa0267000 | Msa0360510 | 0.893370 | 6.697982e-75 | -8.615850e-47 |
Msa0267010 | Msa0360510 | 0.903341 | 3.832340e-79 | -8.615850e-47 |
Msa0270520 | Msa0360510 | 0.877922 | 4.258546e-69 | -8.615850e-47 |
Msa0282310 | Msa0360510 | 0.811579 | 6.523733e-51 | -8.615850e-47 |
Msa0285810 | Msa0360510 | 0.810392 | 1.179267e-50 | -8.615850e-47 |
Msa0304170 | Msa0360510 | 0.838496 | 2.778445e-57 | -8.615850e-47 |
Msa0306460 | Msa0360510 | 0.853584 | 2.169075e-61 | -8.615850e-47 |
Msa0309020 | Msa0360510 | 0.819865 | 9.280590e-53 | -8.615850e-47 |
Msa0311750 | Msa0360510 | 0.809016 | 2.330261e-50 | -8.615850e-47 |
Msa0313760 | Msa0360510 | 0.843527 | 1.326728e-58 | -8.615850e-47 |
Msa0337900 | Msa0360510 | 0.816309 | 5.909903e-52 | -8.615850e-47 |
Msa0342240 | Msa0360510 | 0.890240 | 1.178442e-73 | -8.615850e-47 |
Msa0360510 | Msa0362420 | 0.844360 | 7.935224e-59 | -8.615850e-47 |
Msa0360510 | Msa0363300 | 0.812395 | 4.333099e-51 | -8.615850e-47 |
Msa0360510 | Msa0365500 | 0.869232 | 3.611603e-66 | -8.615850e-47 |
Msa0360510 | Msa0366420 | 0.815801 | 7.675280e-52 | -8.615850e-47 |
Msa0360510 | Msa0366430 | 0.805737 | 1.155448e-49 | -8.615850e-47 |
Msa0360510 | Msa0366580 | 0.800297 | 1.539703e-48 | -8.615850e-47 |
Msa0360510 | Msa0371730 | 0.814383 | 1.584403e-51 | -8.615850e-47 |
Msa0360510 | Msa0378360 | 0.821991 | 3.007121e-53 | -8.615850e-47 |
Msa0360510 | Msa0384800 | 0.856612 | 2.860377e-62 | -8.615850e-47 |
Msa0360510 | Msa0384890 | 0.835130 | 2.007386e-56 | -8.615850e-47 |
Msa0360510 | Msa0391180 | 0.803168 | 3.964801e-49 | -8.615850e-47 |
Msa0360510 | Msa0394970 | 0.822939 | 1.810736e-53 | -8.615850e-47 |
Msa0360510 | Msa0406120 | 0.839585 | 1.451272e-57 | -8.615850e-47 |
Msa0360510 | Msa0407750 | 0.868646 | 5.593298e-66 | -8.615850e-47 |
Msa0360510 | Msa0414410 | 0.898343 | 5.820773e-77 | -8.615850e-47 |
Msa0360510 | Msa0414420 | 0.917231 | 6.830696e-86 | -8.615850e-47 |
Msa0360510 | Msa0423020 | 0.811017 | 8.638439e-51 | -8.615850e-47 |
Msa0360510 | Msa0424550 | 0.809344 | 1.982554e-50 | -8.615850e-47 |
Msa0360510 | Msa0427710 | 0.819297 | 1.250302e-52 | -8.615850e-47 |
Msa0360510 | Msa0428000 | 0.824520 | 7.719809e-54 | -8.615850e-47 |
Msa0360510 | Msa0428010 | 0.833271 | 5.869777e-56 | -8.615850e-47 |
Msa0360510 | Msa0429880 | 0.815917 | 7.228534e-52 | -8.615850e-47 |
Msa0360510 | Msa0430420 | 0.807905 | 4.021647e-50 | -8.615850e-47 |
Msa0360510 | Msa0436780 | 0.887215 | 1.734856e-72 | -8.615850e-47 |
Msa0360510 | Msa0436800 | 0.871758 | 5.352371e-67 | -8.615850e-47 |
Msa0360510 | Msa0438620 | 0.864061 | 1.594027e-64 | -8.615850e-47 |
Msa0360510 | Msa0444130 | 0.824355 | 8.444860e-54 | -8.615850e-47 |
Msa0360510 | Msa0450000 | 0.866483 | 2.759489e-65 | -8.615850e-47 |
Msa0360510 | Msa0450570 | 0.862304 | 5.570836e-64 | -8.615850e-47 |
Msa0360510 | Msa0451730 | 0.832379 | 9.776518e-56 | -8.615850e-47 |
Msa0360510 | Msa0452900 | 0.923321 | 3.097600e-89 | -8.615850e-47 |
Msa0360510 | Msa0453120 | 0.891021 | 5.805245e-74 | -8.615850e-47 |
Msa0360510 | Msa0454370 | 0.828644 | 8.017981e-55 | -8.615850e-47 |
Msa0360510 | Msa0454910 | 0.835838 | 1.329317e-56 | -8.615850e-47 |
Msa0360510 | Msa0459160 | 0.879753 | 9.631424e-70 | -8.615850e-47 |
Msa0360510 | Msa0459170 | 0.846708 | 1.832999e-59 | -8.615850e-47 |
Msa0360510 | Msa0479340 | 0.814918 | 1.206242e-51 | -8.615850e-47 |
Msa0360510 | Msa0485030 | 0.814002 | 1.923317e-51 | -8.615850e-47 |
Msa0360510 | Msa0486950 | 0.825656 | 4.160935e-54 | -8.615850e-47 |
Msa0360510 | Msa0491590 | 0.850808 | 1.336446e-60 | -8.615850e-47 |
Msa0360510 | Msa0500170 | 0.800364 | 1.491982e-48 | -8.615850e-47 |
Msa0360510 | Msa0502760 | 0.824864 | 6.407720e-54 | -8.615850e-47 |
Msa0360510 | Msa0505080 | 0.807344 | 5.293008e-50 | -8.615850e-47 |
Msa0360510 | Msa0506190 | 0.856659 | 2.769494e-62 | -8.615850e-47 |
Msa0360510 | Msa0506270 | 0.886471 | 3.323269e-72 | -8.615850e-47 |
Msa0360510 | Msa0518540 | 0.818251 | 2.160539e-52 | -8.615850e-47 |
Msa0360510 | Msa0534540 | 0.852973 | 3.247323e-61 | -8.615850e-47 |
Msa0360510 | Msa0564890 | 0.899330 | 2.204580e-77 | -8.615850e-47 |
Msa0360510 | Msa0575010 | 0.802230 | 6.190231e-49 | -8.615850e-47 |
Msa0360510 | Msa0589780 | 0.805876 | 1.079983e-49 | -8.615850e-47 |
Msa0360510 | Msa0590780 | 0.807891 | 4.049221e-50 | -8.615850e-47 |
Msa0360510 | Msa0596150 | 0.839672 | 1.377632e-57 | -8.615850e-47 |
Msa0360510 | Msa0598780 | 0.806779 | 6.969710e-50 | -8.615850e-47 |
Msa0360510 | Msa0600700 | 0.803776 | 2.966336e-49 | -8.615850e-47 |
Msa0360510 | Msa0604350 | 0.847652 | 1.010161e-59 | -8.615850e-47 |
Msa0360510 | Msa0636170 | 0.862991 | 3.421732e-64 | -8.615850e-47 |
Msa0360510 | Msa0639610 | 0.853573 | 2.185975e-61 | -8.615850e-47 |
Msa0360510 | Msa0668260 | 0.813308 | 2.734035e-51 | -8.615850e-47 |
Msa0360510 | Msa0678930 | 0.859915 | 2.972704e-63 | -8.615850e-47 |
Msa0360510 | Msa0689390 | 0.816293 | 5.960354e-52 | -8.615850e-47 |
Msa0360510 | Msa0694370 | 0.841451 | 4.714375e-58 | -8.615850e-47 |
Msa0360510 | Msa0725850 | 0.839578 | 1.457050e-57 | -8.615850e-47 |
Msa0360510 | Msa0726140 | 0.883695 | 3.609332e-71 | -8.615850e-47 |
Msa0360510 | Msa0728060 | 0.804868 | 1.756599e-49 | -8.615850e-47 |
Msa0360510 | Msa0729800 | 0.872341 | 3.425727e-67 | -8.615850e-47 |
Msa0360510 | Msa0732310 | 0.806613 | 7.555434e-50 | -8.615850e-47 |
Msa0360510 | Msa0733290 | 0.837821 | 4.144822e-57 | -8.615850e-47 |
Msa0360510 | Msa0735080 | 0.806261 | 8.962716e-50 | -8.615850e-47 |
Msa0360510 | Msa0741990 | 0.832230 | 1.064285e-55 | -8.615850e-47 |
Msa0360510 | Msa0743810 | 0.906337 | 1.652016e-80 | -8.615850e-47 |
Msa0360510 | Msa0745060 | 0.899157 | 2.615119e-77 | -8.615850e-47 |
Msa0360510 | Msa0766630 | 0.822031 | 2.944633e-53 | -8.615850e-47 |
Msa0360510 | Msa0767720 | 0.853864 | 1.802407e-61 | -8.615850e-47 |
Msa0360510 | Msa0777870 | 0.829129 | 6.117534e-55 | -8.615850e-47 |
Msa0360510 | Msa0783160 | 0.884656 | 1.591217e-71 | -8.615850e-47 |
Msa0360510 | Msa0784290 | 0.822442 | 2.364309e-53 | -8.615850e-47 |
Msa0360510 | Msa0784300 | 0.811400 | 7.134865e-51 | -8.615850e-47 |
Msa0360510 | Msa0787600 | 0.884399 | 1.982062e-71 | -8.615850e-47 |
Msa0360510 | Msa0808010 | 0.875490 | 2.958615e-68 | -8.615850e-47 |
Msa0360510 | Msa0808020 | 0.868292 | 7.275697e-66 | -8.615850e-47 |
Msa0360510 | Msa0811080 | 0.834473 | 2.936330e-56 | -8.615850e-47 |
Msa0360510 | Msa0811270 | 0.803431 | 3.497386e-49 | -8.615850e-47 |
Msa0360510 | Msa0824600 | 0.819952 | 8.864002e-53 | -8.615850e-47 |
Msa0360510 | Msa0825860 | 0.894909 | 1.581427e-75 | -8.615850e-47 |
Msa0360510 | Msa0833290 | 0.856256 | 3.637989e-62 | -8.615850e-47 |
Msa0360510 | Msa0833300 | 0.827185 | 1.799305e-54 | -8.615850e-47 |
Msa0360510 | Msa0845930 | 0.816190 | 6.281944e-52 | -8.615850e-47 |
Msa0360510 | Msa0846210 | 0.862969 | 3.477986e-64 | -8.615850e-47 |
Msa0360510 | Msa0846330 | 0.850076 | 2.145059e-60 | -8.615850e-47 |
Msa0360510 | Msa0846350 | 0.863006 | 3.387504e-64 | -8.615850e-47 |
Msa0360510 | Msa0848960 | 0.834404 | 3.057468e-56 | -8.615850e-47 |
Msa0360510 | Msa0854980 | 0.810414 | 1.166726e-50 | -8.615850e-47 |
Msa0360510 | Msa0858980 | 0.870280 | 1.644211e-66 | -8.615850e-47 |
Msa0360510 | Msa0865320 | 0.874808 | 5.056409e-68 | -8.615850e-47 |
Msa0360510 | Msa0872230 | 0.833529 | 5.062319e-56 | -8.615850e-47 |
Msa0360510 | Msa0873460 | 0.810458 | 1.141501e-50 | -8.615850e-47 |
Msa0360510 | Msa0885280 | 0.821124 | 4.770190e-53 | -8.615850e-47 |
Msa0360510 | Msa0885290 | 0.857907 | 1.185051e-62 | -8.615850e-47 |
Msa0360510 | Msa0887920 | 0.820320 | 7.298709e-53 | -8.615850e-47 |
Msa0360510 | Msa0888370 | 0.847752 | 9.475830e-60 | -8.615850e-47 |
Msa0360510 | Msa0888420 | 0.829836 | 4.118882e-55 | -8.615850e-47 |
Msa0360510 | Msa0889850 | 0.800922 | 1.148405e-48 | -8.615850e-47 |
Msa0360510 | Msa0896080 | 0.855831 | 4.843666e-62 | -8.615850e-47 |
Msa0360510 | Msa0899430 | 0.804868 | 1.756935e-49 | -8.615850e-47 |
Msa0360510 | Msa0899450 | 0.812202 | 4.773602e-51 | -8.615850e-47 |
Msa0360510 | Msa0907260 | 0.851184 | 1.047021e-60 | -8.615850e-47 |
Msa0360510 | Msa0914760 | 0.833025 | 6.758406e-56 | -8.615850e-47 |
Msa0360510 | Msa0922720 | 0.807271 | 5.485059e-50 | -8.615850e-47 |
Msa0360510 | Msa0952190 | 0.804293 | 2.316284e-49 | -8.615850e-47 |
Msa0360510 | Msa0952720 | 0.825635 | 4.209897e-54 | -8.615850e-47 |
Msa0360510 | Msa0954020 | 0.810793 | 9.658791e-51 | -8.615850e-47 |
Msa0360510 | Msa0954910 | 0.820396 | 7.012490e-53 | -8.615850e-47 |
Msa0360510 | Msa0956270 | 0.844418 | 7.654377e-59 | -8.615850e-47 |
Msa0360510 | Msa0957680 | 0.811389 | 7.176042e-51 | -8.615850e-47 |
Msa0360510 | Msa0957860 | 0.800947 | 1.134962e-48 | -8.615850e-47 |
Msa0360510 | Msa0957960 | 0.801252 | 9.830792e-49 | -8.615850e-47 |
Msa0360510 | Msa0979410 | 0.802711 | 4.927036e-49 | -8.615850e-47 |
Msa0360510 | Msa0979850 | 0.803889 | 2.810672e-49 | -8.615850e-47 |
Msa0360510 | Msa0981270 | 0.810893 | 9.191752e-51 | -8.615850e-47 |
Msa0360510 | Msa0981370 | 0.892266 | 1.859099e-74 | -8.615850e-47 |
Msa0360510 | Msa0989060 | 0.891413 | 4.063590e-74 | -8.615850e-47 |
Msa0360510 | Msa0989890 | 0.815651 | 8.287593e-52 | -8.615850e-47 |
Msa0360510 | Msa1016280 | 0.893419 | 6.398461e-75 | -8.615850e-47 |
Msa0360510 | Msa1023010 | 0.824541 | 7.631451e-54 | -8.615850e-47 |
Msa0360510 | Msa1023050 | 0.824359 | 8.422174e-54 | -8.615850e-47 |
Msa0360510 | Msa1024240 | 0.826834 | 2.181994e-54 | -8.615850e-47 |
Msa0360510 | Msa1025360 | 0.909621 | 4.652834e-82 | -8.615850e-47 |
Msa0360510 | Msa1025370 | 0.894075 | 3.466204e-75 | -8.615850e-47 |
Msa0360510 | Msa1030060 | 0.805010 | 1.640645e-49 | -8.615850e-47 |
Msa0360510 | Msa1044830 | 0.902737 | 7.135546e-79 | -8.615850e-47 |
Msa0360510 | Msa1044840 | 0.908511 | 1.577880e-81 | -8.615850e-47 |
Msa0360510 | Msa1047800 | 0.802907 | 4.488682e-49 | -8.615850e-47 |
Msa0360510 | Msa1060840 | 0.832027 | 1.194964e-55 | -8.615850e-47 |
Msa0360510 | Msa1077460 | 0.813318 | 2.720115e-51 | -8.615850e-47 |
Msa0360510 | Msa1087490 | 0.806695 | 7.260067e-50 | -8.615850e-47 |
Msa0360510 | Msa1092990 | 0.874299 | 7.526242e-68 | -8.615850e-47 |
Msa0360510 | Msa1096580 | 0.811579 | 6.523044e-51 | -8.615850e-47 |
Msa0360510 | Msa1099970 | 0.829180 | 5.944675e-55 | -8.615850e-47 |
Msa0360510 | Msa1100980 | 0.910770 | 1.291596e-82 | -8.615850e-47 |
Msa0360510 | Msa1109440 | 0.877541 | 5.787736e-69 | -8.615850e-47 |
Msa0360510 | Msa1112300 | 0.806449 | 8.180043e-50 | -8.615850e-47 |
Msa0360510 | Msa1114030 | 0.805641 | 1.210117e-49 | -8.615850e-47 |
Msa0360510 | Msa1117150 | 0.808270 | 3.363820e-50 | -8.615850e-47 |
Msa0360510 | Msa1121200 | 0.879009 | 1.768013e-69 | -8.615850e-47 |
Msa0360510 | Msa1121480 | 0.800431 | 1.446031e-48 | -8.615850e-47 |
Msa0360510 | Msa1135220 | 0.820404 | 6.982098e-53 | -8.615850e-47 |
Msa0360510 | Msa1135740 | 0.890281 | 1.135071e-73 | -8.615850e-47 |
Msa0360510 | Msa1136090 | 0.848380 | 6.360855e-60 | -8.615850e-47 |
Msa0360510 | Msa1146110 | 0.885048 | 1.137696e-71 | -8.615850e-47 |
Msa0360510 | Msa1149360 | 0.841714 | 4.019050e-58 | -8.615850e-47 |
Msa0360510 | Msa1150370 | 0.859354 | 4.384181e-63 | -8.615850e-47 |
Msa0360510 | Msa1150640 | 0.802781 | 4.767077e-49 | -8.615850e-47 |
Msa0360510 | Msa1160670 | 0.832185 | 1.091661e-55 | -8.615850e-47 |
Msa0360510 | Msa1164120 | 0.807915 | 4.002775e-50 | -8.615850e-47 |
Msa0360510 | Msa1173920 | 0.819699 | 1.012563e-52 | -8.615850e-47 |
Msa0360510 | Msa1182090 | 0.801664 | 8.092384e-49 | -8.615850e-47 |
Msa0360510 | Msa1184420 | 0.816780 | 4.635692e-52 | -8.615850e-47 |
Msa0360510 | Msa1187940 | 0.882209 | 1.262010e-70 | -8.615850e-47 |
Msa0360510 | Msa1187950 | 0.900367 | 7.865731e-78 | -8.615850e-47 |
Msa0360510 | Msa1192640 | 0.909810 | 3.771500e-82 | -8.615850e-47 |
Msa0360510 | Msa1193730 | 0.826626 | 2.446166e-54 | -8.615850e-47 |
Msa0360510 | Msa1230430 | 0.818223 | 2.192290e-52 | -8.615850e-47 |
Msa0360510 | Msa1246880 | 0.840027 | 1.113450e-57 | -8.615850e-47 |
Msa0360510 | Msa1248300 | 0.818932 | 1.514083e-52 | -8.615850e-47 |
Msa0360510 | Msa1248310 | 0.818997 | 1.463643e-52 | -8.615850e-47 |
Msa0360510 | Msa1248370 | 0.808102 | 3.651633e-50 | -8.615850e-47 |
Msa0360510 | Msa1251910 | 0.806611 | 7.561668e-50 | -8.615850e-47 |
Msa0360510 | Msa1253000 | 0.810918 | 9.078323e-51 | -8.615850e-47 |
Msa0360510 | Msa1260100 | 0.822554 | 2.226729e-53 | -8.615850e-47 |
Msa0360510 | Msa1269670 | 0.897119 | 1.914099e-76 | -8.615850e-47 |
Msa0360510 | Msa1270230 | 0.919930 | 2.428466e-87 | -8.615850e-47 |
Msa0360510 | Msa1270240 | 0.903953 | 2.033615e-79 | -8.615850e-47 |
Msa0360510 | Msa1270270 | 0.865198 | 7.026623e-65 | -8.615850e-47 |
Msa0360510 | Msa1273230 | 0.815896 | 7.307978e-52 | -8.615850e-47 |
Msa0360510 | Msa1283330 | 0.907973 | 2.839259e-81 | -8.615850e-47 |
Msa0360510 | Msa1285930 | 0.916080 | 2.735549e-85 | -8.615850e-47 |
Msa0360510 | Msa1287800 | 0.913622 | 4.972712e-84 | -8.615850e-47 |
Msa0360510 | Msa1287810 | 0.921623 | 2.822503e-88 | -8.615850e-47 |
Msa0360510 | Msa1287820 | 0.803358 | 3.621411e-49 | -8.615850e-47 |
Msa0360510 | Msa1287830 | 0.828044 | 1.118987e-54 | -8.615850e-47 |
Msa0360510 | Msa1289420 | 0.833186 | 6.161936e-56 | -8.615850e-47 |
Msa0360510 | Msa1289430 | 0.847357 | 1.217487e-59 | -8.615850e-47 |
Msa0360510 | Msa1297210 | 0.834900 | 2.293162e-56 | -8.615850e-47 |
Msa0360510 | Msa1305480 | 0.845057 | 5.149322e-59 | -8.615850e-47 |
Msa0360510 | Msa1307890 | 0.899050 | 2.906893e-77 | -8.615850e-47 |
Msa0360510 | Msa1310120 | 0.825197 | 5.345098e-54 | -8.615850e-47 |
Msa0360510 | Msa1314280 | 0.831511 | 1.602003e-55 | -8.615850e-47 |
Msa0360510 | Msa1320300 | 0.838327 | 3.072324e-57 | -8.615850e-47 |
Msa0360510 | Msa1340590 | 0.845323 | 4.363222e-59 | -8.615850e-47 |
Msa0360510 | Msa1342200 | 0.823895 | 1.082616e-53 | -8.615850e-47 |
Msa0360510 | Msa1344520 | 0.834976 | 2.194223e-56 | -8.615850e-47 |
Msa0360510 | Msa1369430 | 0.837581 | 4.777444e-57 | -8.615850e-47 |
Msa0360510 | Msa1370210 | 0.801898 | 7.246481e-49 | -8.615850e-47 |
Msa0360510 | Msa1382690 | 0.844504 | 7.259121e-59 | -8.615850e-47 |
Msa0360510 | Msa1382700 | 0.847654 | 1.008622e-59 | -8.615850e-47 |
Msa0360510 | Msa1386330 | 0.805186 | 1.507325e-49 | -8.615850e-47 |
Msa0360510 | Msa1397150 | 0.807913 | 4.007498e-50 | -8.615850e-47 |
Msa0360510 | Msa1397580 | 0.840725 | 7.314186e-58 | -8.615850e-47 |
Msa0360510 | Msa1402790 | 0.839893 | 1.206189e-57 | -8.615850e-47 |
Msa0360510 | Msa1404000 | 0.882228 | 1.241987e-70 | -8.615850e-47 |
Msa0360510 | Msa1408780 | 0.836840 | 7.390547e-57 | -8.615850e-47 |
Msa0360510 | Msa1415310 | 0.868461 | 6.418745e-66 | -8.615850e-47 |
Msa0360510 | Msa1422180 | 0.869890 | 2.205498e-66 | -8.615850e-47 |
Msa0360510 | Msa1433120 | 0.905121 | 5.996349e-80 | -8.615850e-47 |
Msa0360510 | Msa1451190 | 0.807226 | 5.604482e-50 | -8.615850e-47 |
Msa0360510 | Msa1451570 | 0.857015 | 2.175871e-62 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0360510 | MtrunA17_Chr3g0098461 | 79.747 | 158 | 24 | 2 | 1 | 150 | 1 | 158 | 3.49e-83 | 253 |
Msa0360510 | MtrunA17_Chr3g0098461 | 68.595 | 121 | 37 | 1 | 150 | 270 | 40 | 159 | 1.73e-50 | 169 |
Msa0360510 | MtrunA17_Chr3g0098471 | 66.864 | 169 | 18 | 2 | 269 | 403 | 20 | 184 | 1.01e-63 | 204 |
Msa0360510 | MtrunA17_Chr4g0038111 | 74.038 | 104 | 27 | 0 | 330 | 433 | 321 | 424 | 7.26e-46 | 168 |
Msa0360510 | MtrunA17_Chr0c05g0492161 | 65.979 | 97 | 26 | 1 | 1 | 90 | 1 | 97 | 1.40e-35 | 128 |
Msa0360510 | MtrunA17_Chr1g0163591 | 43.333 | 120 | 64 | 2 | 332 | 447 | 276 | 395 | 1.26e-24 | 107 |
Msa0360510 | MtrunA17_Chr1g0163591 | 34.320 | 169 | 94 | 2 | 279 | 430 | 76 | 244 | 3.82e-23 | 102 |
Msa0360510 | MtrunA17_Chr3g0090311 | 37.069 | 116 | 67 | 5 | 152 | 264 | 45 | 157 | 1.05e-12 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0360510 | AT3G18610.2 | 50.909 | 110 | 53 | 1 | 328 | 437 | 305 | 413 | 2.75e-27 | 115 |
Msa0360510 | AT3G18610.3 | 50.909 | 110 | 53 | 1 | 328 | 437 | 335 | 443 | 2.81e-27 | 115 |
Msa0360510 | AT3G18610.1 | 50.909 | 110 | 53 | 1 | 328 | 437 | 365 | 473 | 3.07e-27 | 115 |
Msa0360510 | AT1G48920.1 | 44.068 | 118 | 57 | 4 | 328 | 437 | 278 | 394 | 2.81e-24 | 106 |
Msa0360510 | AT1G45100.1 | 46.053 | 76 | 41 | 0 | 348 | 423 | 247 | 322 | 2.52e-11 | 65.9 |
Msa0360510 | AT5G13780.1 | 36.842 | 114 | 66 | 5 | 152 | 262 | 45 | 155 | 6.79e-11 | 62.0 |
Find 117 sgRNAs with CRISPR-Local
Find 529 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATAAGGATGGAAAGCTTAA+AGG | 0.173752 | 3_1:-49866329 | Msa0360510:CDS |
TAAAGATCGTCTTTCTTTAC+AGG | 0.196172 | 3_1:+49867093 | None:intergenic |
AGTAATTACCTGTTATTATT+AGG | 0.205492 | 3_1:+49866080 | None:intergenic |
GGCTGAAATGGACTTGAAAA+AGG | 0.276827 | 3_1:-49873233 | Msa0360510:intron |
AATGCGTCAGTGTTGGTCTT+TGG | 0.291887 | 3_1:+49873060 | None:intergenic |
TCATCTTCTGAAGAATCTTC+TGG | 0.335928 | 3_1:-49867066 | Msa0360510:CDS |
TGTTGACCTATATAAGATTC+TGG | 0.336459 | 3_1:-49873464 | Msa0360510:CDS |
ACTCCTTCTCTCCGAAAGAT+AGG | 0.337370 | 3_1:+49869016 | None:intergenic |
ATGCGTCAGTGTTGGTCTTT+GGG | 0.337802 | 3_1:+49873061 | None:intergenic |
TTCTACAACGATGGTGTCCC+CGG | 0.363342 | 3_1:-49873512 | None:intergenic |
ACTTGTGAACATGGCTGAAA+TGG | 0.363887 | 3_1:-49873245 | Msa0360510:CDS |
TGTCCTGTTCTTCGAAAGAT+AGG | 0.365972 | 3_1:+49873277 | None:intergenic |
ATGTCAAGAGCTTACGTATT+GGG | 0.379625 | 3_1:+49866271 | None:intergenic |
ATCCATCAGAGTTGGTCTTC+GGG | 0.381778 | 3_1:+49868706 | None:intergenic |
GGCCCTATCTTTCGAAGAAC+AGG | 0.389030 | 3_1:-49873280 | Msa0360510:CDS |
ATTACTCTTCTTCGAAAAGA+TGG | 0.392800 | 3_1:-49873040 | Msa0360510:CDS |
GATGGAAAGCTTAAAGGCTT+TGG | 0.397596 | 3_1:-49866323 | Msa0360510:CDS |
CATATGCTCCTAATAATAAC+AGG | 0.399835 | 3_1:-49866088 | Msa0360510:intron |
TATTAGGCACTTAAGATGAA+TGG | 0.404097 | 3_1:-49866164 | Msa0360510:intron |
ATTACTCTTCTTCGAAAAGA+TGG | 0.410597 | 3_1:-49868685 | Msa0360510:CDS |
TGACGTGGATACTCAAAGTT+TGG | 0.414598 | 3_1:-49873425 | Msa0360510:CDS |
TCTTCGTTAACCCTATCTTT+CGG | 0.418866 | 3_1:-49869027 | Msa0360510:CDS |
AATCCATCAGAGTTGGTCTT+CGG | 0.430864 | 3_1:+49868705 | None:intergenic |
TGTACGTCTTGCTTCTCATA+AGG | 0.432229 | 3_1:-49866345 | Msa0360510:CDS |
GTGAAGAGCAATTATATTGA+TGG | 0.434863 | 3_1:-49868645 | Msa0360510:CDS |
AACGATGGTGTCCCCGGGTG+TGG | 0.437378 | 3_1:-49873506 | None:intergenic |
AGAATCTTATATAGGTCAAC+AGG | 0.439517 | 3_1:+49873466 | None:intergenic |
GTGACGAGCAATAATATTGA+TGG | 0.440918 | 3_1:-49873000 | Msa0360510:CDS |
TGAAAAGGACTTAAGGGATA+AGG | 0.447385 | 3_1:-49868969 | Msa0360510:intron |
AAATATATATACCTTGGTAT+AGG | 0.452925 | 3_1:+49865885 | None:intergenic |
CATATCACTTCCCTCTTCGT+TGG | 0.453367 | 3_1:-49873301 | Msa0360510:CDS |
AAGCGCTGAAAAGGACTTAA+GGG | 0.454905 | 3_1:-49868975 | Msa0360510:CDS |
GACTTGATTTAGCTCGGGAG+AGG | 0.463792 | 3_1:-49866115 | Msa0360510:CDS |
ACTTGTGGAAAGCGCTGAAA+AGG | 0.467490 | 3_1:-49868984 | Msa0360510:CDS |
AAAGCGCTGAAAAGGACTTA+AGG | 0.468986 | 3_1:-49868976 | Msa0360510:CDS |
GAACTGAAGCGTACTGGTTA+CGG | 0.472216 | 3_1:-49873325 | Msa0360510:CDS |
AAAGATAGGGTTAACGAAGA+TGG | 0.472513 | 3_1:+49869030 | None:intergenic |
ATTAGGCACTTAAGATGAAT+GGG | 0.473468 | 3_1:-49866163 | Msa0360510:intron |
TATGTTGGGAACTTATCCTT+CGG | 0.474371 | 3_1:-49866498 | Msa0360510:CDS |
GGTTACCTTGTCTTTGATGT+TGG | 0.476676 | 3_1:-49873349 | Msa0360510:CDS |
TCAGAGTTGGTCTTCGGGAC+GGG | 0.477721 | 3_1:+49868711 | None:intergenic |
CGCTACTCGACTTGTGAACA+TGG | 0.478182 | 3_1:-49873254 | Msa0360510:CDS |
TGAGGTTGCTGCCAAACAAA+AGG | 0.484062 | 3_1:-49867314 | Msa0360510:intron |
TTACTCTTCTTCGAAAAGAT+GGG | 0.485859 | 3_1:-49868684 | Msa0360510:CDS |
TTACTCTTCTTCGAAAAGAT+GGG | 0.494195 | 3_1:-49873039 | Msa0360510:CDS |
TGGACTGTTTACAGGCGTGC+AGG | 0.495759 | 3_1:-49865923 | Msa0360510:intron |
CTTCGAAAAGATGGGGTATG+AGG | 0.498568 | 3_1:-49873031 | Msa0360510:CDS |
CTGTCCGACTTGATTTAGCT+CGG | 0.502487 | 3_1:-49866121 | Msa0360510:CDS |
AACCCTATCTTTCGGAGAGA+AGG | 0.502877 | 3_1:-49869019 | Msa0360510:CDS |
AGTTTCTTCAAAGAAGCAAA+AGG | 0.509361 | 3_1:-49867341 | Msa0360510:CDS |
CATTCACCAGAATCTTATAT+AGG | 0.510974 | 3_1:+49873458 | None:intergenic |
ACTTGATTTAGCTCGGGAGA+GGG | 0.513360 | 3_1:-49866114 | Msa0360510:CDS |
GTGTGAAGACATTATATGTT+GGG | 0.513802 | 3_1:-49866512 | Msa0360510:CDS |
TGACCACAACCATTACTCTT+CGG | 0.514416 | 3_1:+49869061 | None:intergenic |
CGTGTGAAGACATTATATGT+TGG | 0.515977 | 3_1:-49866513 | Msa0360510:CDS |
TATATACCTTGGTATAGGCC+TGG | 0.518085 | 3_1:+49865890 | None:intergenic |
GCGTCTCTTACGACCACACC+CGG | 0.518110 | 3_1:+49873493 | None:intergenic |
TGTCCGACTTGATTTAGCTC+GGG | 0.530721 | 3_1:-49866120 | Msa0360510:CDS |
CGTCTTGCTTCTCATAAGGA+TGG | 0.533795 | 3_1:-49866341 | Msa0360510:CDS |
GATACTCAAAGTTTGGTGAA+TGG | 0.534335 | 3_1:-49873418 | Msa0360510:intron |
GATGGGGTATGAGGAGGAGG+CGG | 0.535830 | 3_1:-49873022 | Msa0360510:CDS |
GTCCCGAAGACCAACTCTGA+TGG | 0.538106 | 3_1:-49868708 | Msa0360510:CDS |
TGAAGAGCAATTATATTGAT+GGG | 0.547887 | 3_1:-49868644 | Msa0360510:CDS |
GAGCAATTATATTGATGGGA+AGG | 0.549182 | 3_1:-49868640 | Msa0360510:CDS |
AGGAGTCGCTTCTAAACTTG+TGG | 0.551270 | 3_1:-49868999 | Msa0360510:CDS |
ATCAGAGTTGGTCTTCGGGA+CGG | 0.551912 | 3_1:+49868710 | None:intergenic |
AAAGATGGGGTATGAGGAGG+AGG | 0.552057 | 3_1:-49873025 | Msa0360510:CDS |
CGTGCAGGATTCTATAAACC+AGG | 0.552805 | 3_1:-49865908 | Msa0360510:CDS |
CTCCTTCTCTCCGAAAGATA+GGG | 0.554373 | 3_1:+49869017 | None:intergenic |
AAACTTTGAGTATCCACGTC+AGG | 0.555864 | 3_1:+49873427 | None:intergenic |
GATCGCCAAGACGCTATCCT+CGG | 0.566309 | 3_1:-49869109 | Msa0360510:CDS |
TCTACAACGATGGTGTCCCC+GGG | 0.568555 | 3_1:-49873511 | None:intergenic |
GCAAGCTGTGGAAGAAGTCG+AGG | 0.568949 | 3_1:-49867365 | Msa0360510:CDS |
GTTGCAGCAGATGATCTCCT+AGG | 0.569948 | 3_1:-49873382 | Msa0360510:intron |
ATCATGACGAAGAAGTTCGA+GGG | 0.572521 | 3_1:-49868603 | Msa0360510:CDS |
CGAAAAGATGGGGTATGAGA+AGG | 0.577206 | 3_1:-49868673 | Msa0360510:CDS |
CTTGATTTAGCTCGGGAGAG+GGG | 0.578698 | 3_1:-49866113 | Msa0360510:CDS |
GTTGGTGAACTGAAGCGTAC+TGG | 0.578758 | 3_1:-49873331 | Msa0360510:CDS |
ATCATGACGAAGAAGCTCAA+GGG | 0.579195 | 3_1:-49872958 | Msa0360510:CDS |
GAAGAGTAATCCATCAGAGT+TGG | 0.583113 | 3_1:+49868698 | None:intergenic |
AAAGATAGGGCCAACGAAGA+GGG | 0.584375 | 3_1:+49873291 | None:intergenic |
GAAGAGTAATGCGTCAGTGT+TGG | 0.587807 | 3_1:+49873053 | None:intergenic |
CATCATGACGAAGAAGCTCA+AGG | 0.590035 | 3_1:-49872959 | Msa0360510:CDS |
TACTCTTCTTCGAAAAGATG+GGG | 0.590062 | 3_1:-49868683 | Msa0360510:CDS |
TACTCTTCTTCGAAAAGATG+GGG | 0.590062 | 3_1:-49873038 | Msa0360510:CDS |
CATCATGACGAAGAAGTTCG+AGG | 0.591689 | 3_1:-49868604 | Msa0360510:CDS |
TGACGAGCAATAATATTGAT+GGG | 0.592000 | 3_1:-49872999 | Msa0360510:CDS |
CGTAACCGAGGATAGCGTCT+TGG | 0.592411 | 3_1:+49869104 | None:intergenic |
TGTTGAGTTTGCAACTGCAG+AGG | 0.598820 | 3_1:-49866297 | Msa0360510:CDS |
GAAAGATAGGGCCAACGAAG+AGG | 0.603202 | 3_1:+49873290 | None:intergenic |
AAAGAAGCAAAAGGTAGATG+AGG | 0.604240 | 3_1:-49867332 | Msa0360510:CDS |
ATGCATTATGCGGAGACCGA+AGG | 0.609027 | 3_1:-49868573 | Msa0360510:intron |
GAACCGAAGAGTAATGGTTG+TGG | 0.611924 | 3_1:-49869064 | Msa0360510:CDS |
TTGACTTTGATATAGGCAAG+AGG | 0.619505 | 3_1:-49867387 | Msa0360510:intron |
GTCCTGTTCTTCGAAAGATA+GGG | 0.623256 | 3_1:+49873278 | None:intergenic |
GGTAACCGAGGATAATGCCT+AGG | 0.623647 | 3_1:+49873365 | None:intergenic |
GTCGTTGAACCGAAGAGTAA+TGG | 0.627136 | 3_1:-49869070 | Msa0360510:CDS |
CGAAAAGATGGGGTATGAGG+AGG | 0.630413 | 3_1:-49873028 | Msa0360510:CDS |
CGTCTCTTACGACCACACCC+GGG | 0.631420 | 3_1:+49873494 | None:intergenic |
TCATGACGAAGAAGCTCAAG+GGG | 0.631475 | 3_1:-49872957 | Msa0360510:CDS |
AAAGATGGGGTATGAGAAGG+AGG | 0.631960 | 3_1:-49868670 | Msa0360510:CDS |
AAAACTGCCACCCTAGTCGT+CGG | 0.646571 | 3_1:+49865634 | None:intergenic |
GATCTCCTAGGCATTATCCT+CGG | 0.649171 | 3_1:-49873370 | Msa0360510:CDS |
TATAGGCAAGAGGCAAGCTG+TGG | 0.650683 | 3_1:-49867377 | Msa0360510:intron |
GTCTCTTACGACCACACCCG+GGG | 0.653034 | 3_1:+49873495 | None:intergenic |
TGAATCTTCTGATGAAGATG+AGG | 0.655782 | 3_1:-49867043 | Msa0360510:intron |
GGGGAAGCAGATGCATTATG+CGG | 0.657065 | 3_1:-49868583 | Msa0360510:CDS |
CAAGGGGAAGCAGATGCATG+CGG | 0.658889 | 3_1:-49872941 | Msa0360510:CDS |
CATCAAAGACAAGGTAACCG+AGG | 0.661196 | 3_1:+49873353 | None:intergenic |
CAGATGCATGCGGAGAACGA+AGG | 0.679641 | 3_1:-49872931 | Msa0360510:intron |
TCTCCCGAGCTAAATCAAGT+CGG | 0.679997 | 3_1:+49866117 | None:intergenic |
GTTCACCAACATCAAAGACA+AGG | 0.681557 | 3_1:+49873344 | None:intergenic |
TATAAACCAGGCCTATACCA+AGG | 0.685036 | 3_1:-49865896 | Msa0360510:intron |
GAATGATGTCTTTCCTGACG+TGG | 0.685326 | 3_1:-49873440 | Msa0360510:CDS |
TCATGACGAAGAAGTTCGAG+GGG | 0.691102 | 3_1:-49868602 | Msa0360510:CDS |
CATCAAAGATGACGTAACCG+AGG | 0.714623 | 3_1:+49869092 | None:intergenic |
TAAGATTCTTCAAGTCATCG+CGG | 0.762237 | 3_1:-49869134 | Msa0360510:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATATA+TGG | + | chr3_1:49869730-49869749 | None:intergenic | 0.0% |
!! | ATACAATGATATAAAATTAA+GGG | + | chr3_1:49866627-49866646 | None:intergenic | 10.0% |
!! | AATACAATGATATAAAATTA+AGG | + | chr3_1:49866628-49866647 | None:intergenic | 10.0% |
!! | CAAAAATGTTTAATTAAAAA+GGG | + | chr3_1:49866669-49866688 | None:intergenic | 10.0% |
!! | ACAAAAATGTTTAATTAAAA+AGG | + | chr3_1:49866670-49866689 | None:intergenic | 10.0% |
!!! | TTTATAATGTTTTAATTAAC+CGG | + | chr3_1:49868957-49868976 | None:intergenic | 10.0% |
!! | ATACAATGATATAAAATTAA+GGG | + | chr3_1:49866627-49866646 | None:intergenic | 10.0% |
!! | AATACAATGATATAAAATTA+AGG | + | chr3_1:49866628-49866647 | None:intergenic | 10.0% |
!!! | TTTTATATCATTGTATTTAA+TGG | - | chr3_1:49869435-49869454 | Msa0360510:intron | 10.0% |
!! | GAAAAATATTTAATTAAAAC+GGG | + | chr3_1:49869473-49869492 | None:intergenic | 10.0% |
!! | TTACAATGATATAATATAAA+GGG | + | chr3_1:49869652-49869671 | None:intergenic | 10.0% |
!! | ATTACAATGATATAATATAA+AGG | + | chr3_1:49869653-49869672 | None:intergenic | 10.0% |
!! | ATACATTGATATAAAATTAA+GGG | + | chr3_1:49871938-49871957 | None:intergenic | 10.0% |
!! | AATACATTGATATAAAATTA+AGG | + | chr3_1:49871939-49871958 | None:intergenic | 10.0% |
!! | AAATCAATGATATAAAATTA+AGG | + | chr3_1:49872172-49872191 | None:intergenic | 10.0% |
!! | CAAAAAAGTTTAATTAAAAA+GGG | + | chr3_1:49872212-49872231 | None:intergenic | 10.0% |
!! | ACAAAAAAGTTTAATTAAAA+AGG | + | chr3_1:49872213-49872232 | None:intergenic | 10.0% |
!!! | GAAAACAATTTTAACTTTAT+TGG | - | chr3_1:49866314-49866333 | Msa0360510:CDS | 15.0% |
!!! | GAATGAATAATGAAATTTTA+CGG | - | chr3_1:49866404-49866423 | Msa0360510:intron | 15.0% |
!!! | TTTTATATCATTGTATTTAC+TGG | - | chr3_1:49866631-49866650 | Msa0360510:intron | 15.0% |
!!! | AATTAAACATTTTTGTTTCA+TGG | - | chr3_1:49866674-49866693 | Msa0360510:intron | 15.0% |
!!! | TTGTTTGGATTTTTAATAAT+AGG | - | chr3_1:49868574-49868593 | Msa0360510:CDS | 15.0% |
!! | AATATATAAAAGAATAACTG+GGG | + | chr3_1:49868771-49868790 | None:intergenic | 15.0% |
!! | CAATATATAAAAGAATAACT+GGG | + | chr3_1:49868772-49868791 | None:intergenic | 15.0% |
!! | ACAATATATAAAAGAATAAC+TGG | + | chr3_1:49868773-49868792 | None:intergenic | 15.0% |
!!! | AATTAAATATTTTTCTGTCA+TGG | - | chr3_1:49869478-49869497 | Msa0360510:intron | 15.0% |
!!! | ACTACATATTATTGTTATTA+TGG | + | chr3_1:49869766-49869785 | None:intergenic | 15.0% |
!! | TAGTTAAAATCATATATGTT+AGG | - | chr3_1:49870292-49870311 | Msa0360510:intron | 15.0% |
!!! | TTTTATATCAATGTATTTAC+TGG | - | chr3_1:49871942-49871961 | Msa0360510:intron | 15.0% |
!! | ACAAAAATGCTTAATTAAAA+CGG | + | chr3_1:49871981-49872000 | None:intergenic | 15.0% |
!!! | ATTTTATATCATTGATTTAC+CGG | - | chr3_1:49872174-49872193 | Msa0360510:intron | 15.0% |
!!! | AATTAAACTTTTTTGTTTCA+TGG | - | chr3_1:49872217-49872236 | Msa0360510:intron | 15.0% |
!! | TTGAAAAAAGTAACAAATAA+TGG | + | chr3_1:49873145-49873164 | None:intergenic | 15.0% |
!!! | TATTTGTTACTTTTTTCAAT+AGG | - | chr3_1:49873146-49873165 | Msa0360510:intron | 15.0% |
!! | AATTCAAAAAATAAACAGCA+CGG | + | chr3_1:49866287-49866306 | None:intergenic | 20.0% |
!! | TTGTCAAGAAAAAAAAAAAC+AGG | + | chr3_1:49866340-49866359 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTCTTGACAAGA+TGG | - | chr3_1:49866342-49866361 | Msa0360510:CDS | 20.0% |
!! | CTATTCATGATATTAAAGTT+TGG | - | chr3_1:49866478-49866497 | Msa0360510:intron | 20.0% |
!! | TAAAAAACTTCCTACAAAAT+AGG | - | chr3_1:49867111-49867130 | Msa0360510:CDS | 20.0% |
!!! | TTCTGATGTTGTTTTTTTAT+TGG | - | chr3_1:49867800-49867819 | Msa0360510:intron | 20.0% |
!!! | TCTGATGTTGTTTTTTTATT+GGG | - | chr3_1:49867801-49867820 | Msa0360510:intron | 20.0% |
!! | AAAAGTAGTCAAAATTAGTT+CGG | - | chr3_1:49867932-49867951 | Msa0360510:intron | 20.0% |
!! | TAATTAACTTAACTCATTAG+AGG | - | chr3_1:49868900-49868919 | Msa0360510:intron | 20.0% |
!! | AATTAACTTAACTCATTAGA+GGG | - | chr3_1:49868901-49868920 | Msa0360510:intron | 20.0% |
!! | TATTATATCATTGTAATTGC+TGG | - | chr3_1:49869656-49869675 | Msa0360510:intron | 20.0% |
!!! | TAATGTTTTTGGTTTTTTTG+TGG | - | chr3_1:49869813-49869832 | Msa0360510:intron | 20.0% |
!! | AAAATTATGACAGAATCAAT+CGG | + | chr3_1:49870220-49870239 | None:intergenic | 20.0% |
!! | TTAAAATCATATATGTTAGG+AGG | - | chr3_1:49870295-49870314 | Msa0360510:intron | 20.0% |
!!! | TGTGTCTTCTTTTAATTTAA+TGG | - | chr3_1:49870343-49870362 | Msa0360510:intron | 20.0% |
!!! | TTTTAATTTAATGGTGTGAT+TGG | - | chr3_1:49870352-49870371 | Msa0360510:intron | 20.0% |
!!! | GTATGAGATTTTAGTTTTAA+AGG | - | chr3_1:49870996-49871015 | Msa0360510:intron | 20.0% |
!!! | AGAGTTTTCAACAATAAAAT+TGG | + | chr3_1:49871678-49871697 | None:intergenic | 20.0% |
!!! | TATTTACTGGTTTTTTAAGA+TGG | - | chr3_1:49871955-49871974 | Msa0360510:intron | 20.0% |
!!! | AATTAAGCATTTTTGTATCA+TGG | - | chr3_1:49871985-49872004 | Msa0360510:intron | 20.0% |
!!! | TTTTGAAGTTTATTGCATAT+TGG | - | chr3_1:49872137-49872156 | Msa0360510:intron | 20.0% |
!!! | AAAAGGGAATTTTAAAAAAC+CGG | + | chr3_1:49872196-49872215 | None:intergenic | 20.0% |
!!! | CTATTACCCTTTTTAATATT+AGG | - | chr3_1:49872968-49872987 | Msa0360510:CDS | 20.0% |
!! | TAAGTGCCTAATATTAAAAA+GGG | + | chr3_1:49872977-49872996 | None:intergenic | 20.0% |
!! | TTAAGTGCCTAATATTAAAA+AGG | + | chr3_1:49872978-49872997 | None:intergenic | 20.0% |
!! | AGTAATTACCTGTTATTATT+AGG | + | chr3_1:49873071-49873090 | None:intergenic | 20.0% |
!! | GTAGTTAAAAGAAAATTTCT+TGG | + | chr3_1:49873098-49873117 | None:intergenic | 20.0% |
!! | GTATTAAAAACTTTACTTCA+TGG | - | chr3_1:49873205-49873224 | Msa0360510:intron | 20.0% |
!! | AAATATATATACCTTGGTAT+AGG | + | chr3_1:49873266-49873285 | None:intergenic | 20.0% |
!! | AAATATTGTTGAAAAACCAT+TGG | + | chr3_1:49873318-49873337 | None:intergenic | 20.0% |
!!! | AATTTAACTTGTCATTTTTC+AGG | - | chr3_1:49873474-49873493 | Msa0360510:CDS | 20.0% |
!!! | ATTTAACTTGTCATTTTTCA+GGG | - | chr3_1:49873475-49873494 | Msa0360510:CDS | 20.0% |
!!! | TGAAAAAGGTTTTGTATGTT+TGG | - | chr3_1:49865929-49865948 | Msa0360510:intron | 25.0% |
!!! | GAAGTTTACAACTATTTCTA+TGG | + | chr3_1:49866833-49866852 | None:intergenic | 25.0% |
! | GTAAACTTCTAACTATTAGT+TGG | - | chr3_1:49866844-49866863 | Msa0360510:intron | 25.0% |
! | TTGTTATCTCATAATACGAA+AGG | + | chr3_1:49866941-49866960 | None:intergenic | 25.0% |
! | CATCATTCAATAAGATTCAA+TGG | + | chr3_1:49867011-49867030 | None:intergenic | 25.0% |
! | ACTAATCTAACTAGAGATTA+AGG | - | chr3_1:49867175-49867194 | Msa0360510:intron | 25.0% |
!! | TATTTCGACTATAATGCTTT+TGG | - | chr3_1:49867255-49867274 | Msa0360510:intron | 25.0% |
! | ACTAAGAAGAATACTTTAAG+GGG | + | chr3_1:49867405-49867424 | None:intergenic | 25.0% |
! | GACTAAGAAGAATACTTTAA+GGG | + | chr3_1:49867406-49867425 | None:intergenic | 25.0% |
! | AGACTAAGAAGAATACTTTA+AGG | + | chr3_1:49867407-49867426 | None:intergenic | 25.0% |
!!! | ATTTTTTTTTACACTGAGCT+TGG | - | chr3_1:49867528-49867547 | Msa0360510:intron | 25.0% |
! | TTCACTTATAGATATCTTCA+TGG | - | chr3_1:49867636-49867655 | Msa0360510:intron | 25.0% |
! | TCGGAACATCAAATAAAATT+GGG | + | chr3_1:49867685-49867704 | None:intergenic | 25.0% |
! | TTCGGAACATCAAATAAAAT+TGG | + | chr3_1:49867686-49867705 | None:intergenic | 25.0% |
! | AGTGATTTCAAAGAAACAAA+AGG | - | chr3_1:49867875-49867894 | Msa0360510:intron | 25.0% |
! | ATGAAAATACAAACGAATAC+AGG | + | chr3_1:49868038-49868057 | None:intergenic | 25.0% |
!! | GAAATTCACTAATTTGAGTT+TGG | + | chr3_1:49868067-49868086 | None:intergenic | 25.0% |
! | ATCATATAATCATGTGTAAC+AGG | + | chr3_1:49868555-49868574 | None:intergenic | 25.0% |
! | CACATGATTATATGATTGTT+TGG | - | chr3_1:49868559-49868578 | Msa0360510:intron | 25.0% |
! | TATTGTTATCATCAAAACCT+TGG | - | chr3_1:49868787-49868806 | Msa0360510:intron | 25.0% |
!!! | CATTGTTCTAAAACTCAATT+TGG | - | chr3_1:49868813-49868832 | Msa0360510:intron | 25.0% |
! | GAATCAAAATTCTAATCAGA+AGG | + | chr3_1:49869120-49869139 | None:intergenic | 25.0% |
!!! | AAGCTGTTTCTTCTAAAATA+GGG | - | chr3_1:49869519-49869538 | Msa0360510:intron | 25.0% |
! | CCAAAAACATTATAGTAGAA+AGG | + | chr3_1:49869805-49869824 | None:intergenic | 25.0% |
!! | CCTTTCTACTATAATGTTTT+TGG | - | chr3_1:49869802-49869821 | Msa0360510:intron | 25.0% |
!! | TATCTTGCATAACGAATTTT+GGG | + | chr3_1:49869889-49869908 | None:intergenic | 25.0% |
!! | ATATCTTGCATAACGAATTT+TGG | + | chr3_1:49869890-49869909 | None:intergenic | 25.0% |
!! | TGATTCTGTCATAATTTTGT+TGG | - | chr3_1:49870222-49870241 | Msa0360510:intron | 25.0% |
! | TAACTAACAATAGCAATAAC+AGG | + | chr3_1:49870274-49870293 | None:intergenic | 25.0% |
! | TGAAGAGCAATTATATTGAT+GGG | - | chr3_1:49870504-49870523 | Msa0360510:intron | 25.0% |
! | GAAAACAATTCCAACTTTAT+TGG | - | chr3_1:49870673-49870692 | Msa0360510:intron | 25.0% |
! | AGTCATTCTATTTATCAGAT+AGG | - | chr3_1:49870742-49870761 | Msa0360510:intron | 25.0% |
! | ACCTTGATCATTAAGAAATT+TGG | - | chr3_1:49870897-49870916 | Msa0360510:intron | 25.0% |
! | ACCAAATTTCTTAATGATCA+AGG | + | chr3_1:49870901-49870920 | None:intergenic | 25.0% |
! | ATCATTAAGAAATTTGGTAG+AGG | - | chr3_1:49870903-49870922 | Msa0360510:intron | 25.0% |
! | TCATTAAGAAATTTGGTAGA+GGG | - | chr3_1:49870904-49870923 | Msa0360510:intron | 25.0% |
!!! | ACTTGTTTTCTGTGATTTTT+CGG | + | chr3_1:49871107-49871126 | None:intergenic | 25.0% |
!! | AAATCAGACAAGCTTTTATT+TGG | - | chr3_1:49871205-49871224 | Msa0360510:intron | 25.0% |
!!! | TACTTAGTTTCAAAGCATTT+TGG | - | chr3_1:49871239-49871258 | Msa0360510:intron | 25.0% |
! | AGCAACATTATTACATTGAT+AGG | - | chr3_1:49871352-49871371 | Msa0360510:intron | 25.0% |
! | TTTGAATTGATCAAATTCTC+CGG | + | chr3_1:49871604-49871623 | None:intergenic | 25.0% |
! | AGAACATCAGAAAAAATTTC+CGG | + | chr3_1:49871725-49871744 | None:intergenic | 25.0% |
!! | TTTCTGATGTTCTTGTTTAT+TGG | - | chr3_1:49871732-49871751 | Msa0360510:intron | 25.0% |
!! | TTCTGATGTTCTTGTTTATT+GGG | - | chr3_1:49871733-49871752 | Msa0360510:intron | 25.0% |
!!! | GGTTATTTTGACTTTGATAT+AGG | - | chr3_1:49871754-49871773 | Msa0360510:intron | 25.0% |
! | TAAAAAGGGTAATAGTCATT+TGG | + | chr3_1:49872963-49872982 | None:intergenic | 25.0% |
! | ATACAACATTAGAAGAAACA+GGG | + | chr3_1:49873189-49873208 | None:intergenic | 25.0% |
! | AATACAACATTAGAAGAAAC+AGG | + | chr3_1:49873190-49873209 | None:intergenic | 25.0% |
! | AGAGGAAAATATATATACCT+TGG | + | chr3_1:49873272-49873291 | None:intergenic | 25.0% |
AGAATCTTATATAGGTCAAC+AGG | + | chr3_1:49865685-49865704 | None:intergenic | 30.0% | |
TGTTGACCTATATAAGATTC+TGG | - | chr3_1:49865684-49865703 | Msa0360510:intron | 30.0% | |
CATTCACCAGAATCTTATAT+AGG | + | chr3_1:49865693-49865712 | None:intergenic | 30.0% | |
! | GTTAGTGTGTCTTCTTTTAA+TGG | - | chr3_1:49865988-49866007 | Msa0360510:intron | 30.0% |
GATTGGTGTAGTCTTTAATA+TGG | - | chr3_1:49866014-49866033 | Msa0360510:intron | 30.0% | |
ATTACTCTTCTTCGAAAAGA+TGG | - | chr3_1:49866108-49866127 | Msa0360510:CDS | 30.0% | |
TTACTCTTCTTCGAAAAGAT+GGG | - | chr3_1:49866109-49866128 | Msa0360510:CDS | 30.0% | |
TGACGAGCAATAATATTGAT+GGG | - | chr3_1:49866149-49866168 | Msa0360510:CDS | 30.0% | |
!! | CAAAAGGCATTTGATTGTTA+GGG | - | chr3_1:49866245-49866264 | Msa0360510:intron | 30.0% |
ATACTATTGATGTGAGTGAA+AGG | - | chr3_1:49866429-49866448 | Msa0360510:intron | 30.0% | |
!! | TTTGGTGCTTATTACATCTT+AGG | - | chr3_1:49866496-49866515 | Msa0360510:CDS | 30.0% |
! | TTGGTGCTTATTACATCTTA+GGG | - | chr3_1:49866497-49866516 | Msa0360510:CDS | 30.0% |
!! | AAGCTGTTCCTTCTAAAATA+GGG | - | chr3_1:49866715-49866734 | Msa0360510:intron | 30.0% |
TCAAATCATACAACCATTAG+AGG | + | chr3_1:49866882-49866901 | None:intergenic | 30.0% | |
! | ATATGTAATTGTCGCTTCTA+TGG | - | chr3_1:49866913-49866932 | Msa0360510:intron | 30.0% |
!!! | TAGGAAGTTTTTTAGAGTGA+TGG | + | chr3_1:49867105-49867124 | None:intergenic | 30.0% |
! | TTATGCATCTCCTATTTTGT+AGG | + | chr3_1:49867124-49867143 | None:intergenic | 30.0% |
!! | TGTCATCAATAGCTTTATCT+TGG | - | chr3_1:49867224-49867243 | Msa0360510:intron | 30.0% |
!!! | AATGCTTTTGGTTTGTTTGT+AGG | - | chr3_1:49867267-49867286 | Msa0360510:intron | 30.0% |
! | CATTAGTTTATGAATGCTAG+AGG | + | chr3_1:49867381-49867400 | None:intergenic | 30.0% |
TAATCTATGTCGAGACATTT+AGG | + | chr3_1:49867487-49867506 | None:intergenic | 30.0% | |
!!! | CTTGGTTGGTTTTAATTGAT+CGG | - | chr3_1:49867546-49867565 | Msa0360510:intron | 30.0% |
GGAACATCAAATAAAATTGG+GGG | + | chr3_1:49867683-49867702 | None:intergenic | 30.0% | |
CGGAACATCAAATAAAATTG+GGG | + | chr3_1:49867684-49867703 | None:intergenic | 30.0% | |
TAGCACATGTTAATCAACTT+CGG | + | chr3_1:49867704-49867723 | None:intergenic | 30.0% | |
! | AAGTTGATTAACATGTGCTA+TGG | - | chr3_1:49867704-49867723 | Msa0360510:intron | 30.0% |
ATGGTTATAGAGTTGTTGAT+TGG | - | chr3_1:49867723-49867742 | Msa0360510:intron | 30.0% | |
!! | GATTGGTCGAATTGATTTTA+TGG | - | chr3_1:49867740-49867759 | Msa0360510:intron | 30.0% |
!!! | GGTTATTTTGACCTTGATAT+AGG | - | chr3_1:49867822-49867841 | Msa0360510:intron | 30.0% |
CTACCACATTAAATTCATGA+CGG | + | chr3_1:49868013-49868032 | None:intergenic | 30.0% | |
!!! | ATTTCCCCATTTTGATTTTG+AGG | - | chr3_1:49868082-49868101 | Msa0360510:intron | 30.0% |
!!! | TTTCCCCATTTTGATTTTGA+GGG | - | chr3_1:49868083-49868102 | Msa0360510:intron | 30.0% |
AGTATAGCGAGAATAAACTA+GGG | - | chr3_1:49868116-49868135 | Msa0360510:intron | 30.0% | |
!! | AACTGGAGAGAGTATTTATA+AGG | + | chr3_1:49868172-49868191 | None:intergenic | 30.0% |
TCTTTGCAGACATTATATGT+TGG | - | chr3_1:49868218-49868237 | Msa0360510:intron | 30.0% | |
CTTTGCAGACATTATATGTT+GGG | - | chr3_1:49868219-49868238 | Msa0360510:intron | 30.0% | |
GTAAAATTCTTCCAACATTG+TGG | - | chr3_1:49868352-49868371 | Msa0360510:intron | 30.0% | |
ACTCTTATTGTTTGTTTCCA+AGG | - | chr3_1:49868511-49868530 | Msa0360510:intron | 30.0% | |
!! | TATCCTCTTTTTAAGAGTCT+TGG | - | chr3_1:49868683-49868702 | Msa0360510:CDS | 30.0% |
! | GTGATTTTATTATCCCCTTT+CGG | - | chr3_1:49868716-49868735 | Msa0360510:CDS | 30.0% |
! | TAGTTTGTCATCATCAAAGA+GGG | + | chr3_1:49868852-49868871 | None:intergenic | 30.0% |
!! | TTAGTTTGTCATCATCAAAG+AGG | + | chr3_1:49868853-49868872 | None:intergenic | 30.0% |
! | AATTAACCGGTTTAGACTTA+GGG | + | chr3_1:49868944-49868963 | None:intergenic | 30.0% |
! | TAATTAACCGGTTTAGACTT+AGG | + | chr3_1:49868945-49868964 | None:intergenic | 30.0% |
!! | TTGATTCTGAAGTTCTTCTT+AGG | - | chr3_1:49869133-49869152 | Msa0360510:intron | 30.0% |
!! | TGATTCTGAAGTTCTTCTTA+GGG | - | chr3_1:49869134-49869153 | Msa0360510:intron | 30.0% |
GGCAAAGAGAATTTAAGAAT+TGG | - | chr3_1:49869222-49869241 | Msa0360510:intron | 30.0% | |
TATCAGATTCAGGAAGATAT+AGG | + | chr3_1:49869321-49869340 | None:intergenic | 30.0% | |
TTAGGTAGAAGTTTGACATT+TGG | - | chr3_1:49869355-49869374 | Msa0360510:intron | 30.0% | |
TTTGACATTTGGAAATCCAT+AGG | - | chr3_1:49869366-49869385 | Msa0360510:intron | 30.0% | |
!! | GAAGCTGTTTCTTCTAAAAT+AGG | - | chr3_1:49869518-49869537 | Msa0360510:intron | 30.0% |
!! | TCATTTTGTTTCATCTAGTG+AGG | - | chr3_1:49869568-49869587 | Msa0360510:intron | 30.0% |
TCAAATCATACAACCATTAG+AGG | + | chr3_1:49866882-49866901 | None:intergenic | 30.0% | |
!! | CTGTCATAATTTTGTTGGTT+TGG | - | chr3_1:49870227-49870246 | Msa0360510:intron | 30.0% |
ATTACTCTTCTTCGAAAAGA+TGG | - | chr3_1:49866108-49866127 | Msa0360510:CDS | 30.0% | |
TTACTCTTCTTCGAAAAGAT+GGG | - | chr3_1:49866109-49866128 | Msa0360510:CDS | 30.0% | |
GTGAAGAGCAATTATATTGA+TGG | - | chr3_1:49870503-49870522 | Msa0360510:intron | 30.0% | |
ATCAAACTAGCCAATAAAGT+TGG | + | chr3_1:49870686-49870705 | None:intergenic | 30.0% | |
AGAAAAGTTTCCTATAGTTG+AGG | - | chr3_1:49870718-49870737 | Msa0360510:intron | 30.0% | |
! | GCTAAAATGCTTGTCTTTTT+GGG | + | chr3_1:49870789-49870808 | None:intergenic | 30.0% |
! | TGCTAAAATGCTTGTCTTTT+TGG | + | chr3_1:49870790-49870809 | None:intergenic | 30.0% |
AATCCAAGTAAAACGTGAAA+AGG | - | chr3_1:49871022-49871041 | Msa0360510:intron | 30.0% | |
TAACCACATGACAATTCAAT+AGG | - | chr3_1:49871073-49871092 | Msa0360510:intron | 30.0% | |
! | TTGTTTTCTGTGATTTTTCG+GGG | + | chr3_1:49871105-49871124 | None:intergenic | 30.0% |
!! | CTTGTTTTCTGTGATTTTTC+GGG | + | chr3_1:49871106-49871125 | None:intergenic | 30.0% |
CGAAACTGTAAACTAGAAAA+CGG | - | chr3_1:49871377-49871396 | Msa0360510:intron | 30.0% | |
GAAACTGTAAACTAGAAAAC+GGG | - | chr3_1:49871378-49871397 | Msa0360510:intron | 30.0% | |
! | AGGATATAAAGATTTTGTCG+TGG | + | chr3_1:49871635-49871654 | None:intergenic | 30.0% |
CAACAATAAAATTGGAGAAG+TGG | + | chr3_1:49871670-49871689 | None:intergenic | 30.0% | |
AGTTTCTTCAAAGAAGCAAA+AGG | - | chr3_1:49871807-49871826 | Msa0360510:intron | 30.0% | |
! | TACCTTCAAAACCTTTTGTT+TGG | + | chr3_1:49871848-49871867 | None:intergenic | 30.0% |
AAAGTTGTTCCATCCAAAAA+TGG | - | chr3_1:49872025-49872044 | Msa0360510:intron | 30.0% | |
AAGTTGTTCCATCCAAAAAT+GGG | - | chr3_1:49872026-49872045 | Msa0360510:intron | 30.0% | |
TAAAGATCGTCTTTCTTTAC+AGG | + | chr3_1:49872058-49872077 | None:intergenic | 30.0% | |
AGAGTTAGAAGGTTACAATA+TGG | + | chr3_1:49872373-49872392 | None:intergenic | 30.0% | |
TATTGTAACCTTCTAACTCT+TGG | - | chr3_1:49872373-49872392 | Msa0360510:intron | 30.0% | |
GGACATATATTGAAATGTTG+AGG | + | chr3_1:49872415-49872434 | None:intergenic | 30.0% | |
GTGTGAAGACATTATATGTT+GGG | - | chr3_1:49872636-49872655 | Msa0360510:intron | 30.0% | |
TTTACTCATCATGTGATTCT+TGG | - | chr3_1:49872699-49872718 | Msa0360510:intron | 30.0% | |
GAAAAATTCTTCCAAGATTG+TGG | - | chr3_1:49872768-49872787 | Msa0360510:intron | 30.0% | |
!! | CAATTACTTTTCCACAATCT+TGG | + | chr3_1:49872782-49872801 | None:intergenic | 30.0% |
! | TTGACATCTTTTCAACTTTG+TGG | - | chr3_1:49872893-49872912 | Msa0360510:intron | 30.0% |
TATTAGGCACTTAAGATGAA+TGG | - | chr3_1:49872984-49873003 | Msa0360510:CDS | 30.0% | |
ATTAGGCACTTAAGATGAAT+GGG | - | chr3_1:49872985-49873004 | Msa0360510:CDS | 30.0% | |
CATATGCTCCTAATAATAAC+AGG | - | chr3_1:49873060-49873079 | Msa0360510:CDS | 30.0% | |
TGAACAACTTCTTGATGAAT+AGG | - | chr3_1:49873340-49873359 | Msa0360510:CDS | 30.0% | |
GAACAACTTCTTGATGAATA+GGG | - | chr3_1:49873341-49873360 | Msa0360510:CDS | 30.0% | |
! | GATACTCAAAGTTTGGTGAA+TGG | - | chr3_1:49865730-49865749 | Msa0360510:intron | 35.0% |
! | TCTTCTTTTAATGGCACGAT+TGG | - | chr3_1:49865997-49866016 | Msa0360510:intron | 35.0% |
TACTCTTCTTCGAAAAGATG+GGG | - | chr3_1:49866110-49866129 | Msa0360510:CDS | 35.0% | |
GTGACGAGCAATAATATTGA+TGG | - | chr3_1:49866148-49866167 | Msa0360510:CDS | 35.0% | |
! | CCTAACAATCAAATGCCTTT+TGG | + | chr3_1:49866247-49866266 | None:intergenic | 35.0% |
!! | CCAAAAGGCATTTGATTGTT+AGG | - | chr3_1:49866244-49866263 | Msa0360510:intron | 35.0% |
AAAAAATAAACAGCACGGAG+GGG | + | chr3_1:49866282-49866301 | None:intergenic | 35.0% | |
CAAAAAATAAACAGCACGGA+GGG | + | chr3_1:49866283-49866302 | None:intergenic | 35.0% | |
TCAAAAAATAAACAGCACGG+AGG | + | chr3_1:49866284-49866303 | None:intergenic | 35.0% | |
!! | AGCTGAAGGTATTACATCTT+AGG | - | chr3_1:49866542-49866561 | Msa0360510:CDS | 35.0% |
!! | GCTGAAGGTATTACATCTTA+GGG | - | chr3_1:49866543-49866562 | Msa0360510:CDS | 35.0% |
TCTAATACCTCATCTTCATC+AGG | + | chr3_1:49866574-49866593 | None:intergenic | 35.0% | |
!! | GAAGCTGTTCCTTCTAAAAT+AGG | - | chr3_1:49866714-49866733 | Msa0360510:intron | 35.0% |
AGAACTATCAGCTTTCTTTG+CGG | + | chr3_1:49866748-49866767 | None:intergenic | 35.0% | |
ATTTCTATGGCTGCTATGAA+AGG | + | chr3_1:49866820-49866839 | None:intergenic | 35.0% | |
! | GTGTTTTGTGATACCTCTAA+TGG | - | chr3_1:49866866-49866885 | Msa0360510:intron | 35.0% |
TTGCTTAAGCAGAACAGTAA+AGG | + | chr3_1:49867347-49867366 | None:intergenic | 35.0% | |
! | GACATTTAGGATGAGAGAAA+AGG | + | chr3_1:49867474-49867493 | None:intergenic | 35.0% |
!!! | TTTTTTACACTGAGCTTGGT+TGG | - | chr3_1:49867532-49867551 | Msa0360510:intron | 35.0% |
GATATCTTCATGGTCTAATG+TGG | - | chr3_1:49867646-49867665 | Msa0360510:intron | 35.0% | |
GAAACAAAAGGTAGATGATG+AGG | - | chr3_1:49867887-49867906 | Msa0360510:intron | 35.0% | |
AGAATCCTTTGATGAATCTG+AGG | - | chr3_1:49867956-49867975 | Msa0360510:intron | 35.0% | |
ATGCCGTCATGAATTTAATG+TGG | - | chr3_1:49868007-49868026 | Msa0360510:intron | 35.0% | |
!!! | TTCCCCATTTTGATTTTGAG+GGG | - | chr3_1:49868084-49868103 | Msa0360510:intron | 35.0% |
ATCCCCCTCAAAATCAAAAT+GGG | + | chr3_1:49868090-49868109 | None:intergenic | 35.0% | |
AATCCCCCTCAAAATCAAAA+TGG | + | chr3_1:49868091-49868110 | None:intergenic | 35.0% | |
CAGTATAGCGAGAATAAACT+AGG | - | chr3_1:49868115-49868134 | Msa0360510:intron | 35.0% | |
! | GGTTGGTTGATTAGTTAGTT+AGG | - | chr3_1:49868137-49868156 | Msa0360510:intron | 35.0% |
TTTCTCACTCATGTGATTCT+TGG | - | chr3_1:49868283-49868302 | Msa0360510:intron | 35.0% | |
! | TCGACATCTTTTCAACTTTG+TGG | - | chr3_1:49868477-49868496 | Msa0360510:intron | 35.0% |
TAGGCACTTAAGATGATGAA+TGG | - | chr3_1:49868593-49868612 | Msa0360510:CDS | 35.0% | |
AGGCACTTAAGATGATGAAT+GGG | - | chr3_1:49868594-49868613 | Msa0360510:CDS | 35.0% | |
TTAAAAAGAGGATATCCACG+AGG | + | chr3_1:49868677-49868696 | None:intergenic | 35.0% | |
TCTCCAAGACTCTTAAAAAG+AGG | + | chr3_1:49868689-49868708 | None:intergenic | 35.0% | |
TTTAAGAGTCTTGGAGAAGA+TGG | - | chr3_1:49868692-49868711 | Msa0360510:CDS | 35.0% | |
TTAAGAGTCTTGGAGAAGAT+GGG | - | chr3_1:49868693-49868712 | Msa0360510:CDS | 35.0% | |
!!! | GTTTTAGAACAATGTCTCCA+AGG | + | chr3_1:49868807-49868826 | None:intergenic | 35.0% |
GCAGTTAAATTCAGATTCTG+TGG | - | chr3_1:49869042-49869061 | Msa0360510:CDS | 35.0% | |
!! | GATTCTGAAGTTCTTCTTAG+GGG | - | chr3_1:49869135-49869154 | Msa0360510:intron | 35.0% |
! | ATGAAGCATTCATGTGTTCT+TGG | - | chr3_1:49869201-49869220 | Msa0360510:intron | 35.0% |
! | CATTTCCTTTGTAGTTTGTG+TGG | + | chr3_1:49869252-49869271 | None:intergenic | 35.0% |
TTCAGGAAGATATAGGAGAT+TGG | + | chr3_1:49869314-49869333 | None:intergenic | 35.0% | |
TATCTTCCTGAATCTGATAG+AGG | - | chr3_1:49869322-49869341 | Msa0360510:intron | 35.0% | |
TCAAACTTCTACCTAATCAG+GGG | + | chr3_1:49869351-49869370 | None:intergenic | 35.0% | |
GTCAAACTTCTACCTAATCA+GGG | + | chr3_1:49869352-49869371 | None:intergenic | 35.0% | |
TGTCAAACTTCTACCTAATC+AGG | + | chr3_1:49869353-49869372 | None:intergenic | 35.0% | |
!! | AAATCCATAGGAGTATCAAC+TGG | - | chr3_1:49869378-49869397 | Msa0360510:intron | 35.0% |
! | TGAATATCCGCTTTCTTTTC+AGG | + | chr3_1:49869551-49869570 | None:intergenic | 35.0% |
! | CGACATATTTAAGATTCTCG+TGG | - | chr3_1:49869948-49869967 | Msa0360510:intron | 35.0% |
GATCTTGAAAGTTTGGAGAA+TGG | - | chr3_1:49869991-49870010 | Msa0360510:intron | 35.0% | |
TAAGATTCTTCAAGTCATCG+CGG | - | chr3_1:49870014-49870033 | Msa0360510:intron | 35.0% | |
AAAGATAGGGTTAACGAAGA+TGG | + | chr3_1:49870121-49870140 | None:intergenic | 35.0% | |
TCTTCGTTAACCCTATCTTT+CGG | - | chr3_1:49870121-49870140 | Msa0360510:intron | 35.0% | |
TGAAAAGGACTTAAGGGATA+AGG | - | chr3_1:49870179-49870198 | Msa0360510:intron | 35.0% | |
GATTGGTGTAGTCTGTAATA+TGG | - | chr3_1:49870369-49870388 | Msa0360510:intron | 35.0% | |
TACTCTTCTTCGAAAAGATG+GGG | - | chr3_1:49866110-49866129 | Msa0360510:CDS | 35.0% | |
GAGCAATTATATTGATGGGA+AGG | - | chr3_1:49870508-49870527 | Msa0360510:intron | 35.0% | |
CCTCACACACATCATAAAAA+TGG | + | chr3_1:49870871-49870890 | None:intergenic | 35.0% | |
!! | CCATTTTTATGATGTGTGTG+AGG | - | chr3_1:49870868-49870887 | Msa0360510:intron | 35.0% |
ATTAAAGTTGCCCAATCTGA+TGG | + | chr3_1:49870943-49870962 | None:intergenic | 35.0% | |
! | ATGCCTTTTCACGTTTTACT+TGG | + | chr3_1:49871028-49871047 | None:intergenic | 35.0% |
AATCACAGAAAACAAGTTCG+AGG | - | chr3_1:49871110-49871129 | Msa0360510:intron | 35.0% | |
ATCACAGAAAACAAGTTCGA+GGG | - | chr3_1:49871111-49871130 | Msa0360510:intron | 35.0% | |
!!! | TTTTGGAGTACGTCATAATG+AGG | - | chr3_1:49871256-49871275 | Msa0360510:intron | 35.0% |
GATTGCCATATGCTATACAA+AGG | - | chr3_1:49871293-49871312 | Msa0360510:intron | 35.0% | |
GTTCACCTTTGTATAGCATA+TGG | + | chr3_1:49871301-49871320 | None:intergenic | 35.0% | |
GTGAACAAGAGTTGTTTGTA+GGG | - | chr3_1:49871315-49871334 | Msa0360510:intron | 35.0% | |
!! | TGTTTGTTGTTTGCTTAGAG+AGG | + | chr3_1:49871519-49871538 | None:intergenic | 35.0% |
! | TAAAGATTTTGTCGTGGAGA+TGG | + | chr3_1:49871629-49871648 | None:intergenic | 35.0% |
TTGACTTTGATATAGGCAAG+AGG | - | chr3_1:49871761-49871780 | Msa0360510:intron | 35.0% | |
AAAGAAGCAAAAGGTAGATG+AGG | - | chr3_1:49871816-49871835 | Msa0360510:intron | 35.0% | |
!! | TGCCAAACAAAAGGTTTTGA+AGG | - | chr3_1:49871843-49871862 | Msa0360510:intron | 35.0% |
! | ATGGAACAACTTTTGTTGCA+GGG | + | chr3_1:49872018-49872037 | None:intergenic | 35.0% |
! | TCATCTTCTGAAGAATCTTC+TGG | - | chr3_1:49872082-49872101 | Msa0360510:intron | 35.0% |
TGAATCTTCTGATGAAGATG+AGG | - | chr3_1:49872105-49872124 | Msa0360510:intron | 35.0% | |
GAAGTTGTTCCTTCCAAAAT+AGG | - | chr3_1:49872257-49872276 | Msa0360510:intron | 35.0% | |
TACAATATGGCTGATATGGA+AGG | + | chr3_1:49872360-49872379 | None:intergenic | 35.0% | |
AGGTTACAATATGGCTGATA+TGG | + | chr3_1:49872364-49872383 | None:intergenic | 35.0% | |
ATATGTCCTACATTCATTCG+TGG | - | chr3_1:49872427-49872446 | Msa0360510:intron | 35.0% | |
TATGTCCTACATTCATTCGT+GGG | - | chr3_1:49872428-49872447 | Msa0360510:intron | 35.0% | |
ATATGGTCTTCAACCCATTA+GGG | + | chr3_1:49872457-49872476 | None:intergenic | 35.0% | |
!! | GATATGCCTTATTTGCAAGA+TGG | + | chr3_1:49872491-49872510 | None:intergenic | 35.0% |
AGAAGTTGCAATCACGTTAA+GGG | + | chr3_1:49872542-49872561 | None:intergenic | 35.0% | |
AAGAAGTTGCAATCACGTTA+AGG | + | chr3_1:49872543-49872562 | None:intergenic | 35.0% | |
!!! | TTTTGTGTAGCAGGAGTATT+AGG | + | chr3_1:49872605-49872624 | None:intergenic | 35.0% |
CGTGTGAAGACATTATATGT+TGG | - | chr3_1:49872635-49872654 | Msa0360510:intron | 35.0% | |
TATGTTGGGAACTTATCCTT+CGG | - | chr3_1:49868233-49868252 | Msa0360510:intron | 35.0% | |
CATAAGGATGGAAAGCTTAA+AGG | - | chr3_1:49872819-49872838 | Msa0360510:intron | 35.0% | |
ATGTCAAGAGCTTACGTATT+GGG | + | chr3_1:49872880-49872899 | None:intergenic | 35.0% | |
TAATGGAATCGAAACAAGTG+AGG | + | chr3_1:49873128-49873147 | None:intergenic | 35.0% | |
! | TTACTTCATGGACTGTTTAC+AGG | - | chr3_1:49873217-49873236 | Msa0360510:intron | 35.0% |
CATAGTACAACAGCAAAAAG+AGG | + | chr3_1:49873290-49873309 | None:intergenic | 35.0% | |
AAACTTTGAGTATCCACGTC+AGG | + | chr3_1:49865724-49865743 | None:intergenic | 40.0% | |
TGACGTGGATACTCAAAGTT+TGG | - | chr3_1:49865723-49865742 | Msa0360510:intron | 40.0% | |
GGTTACCTTGTCTTTGATGT+TGG | - | chr3_1:49865799-49865818 | Msa0360510:intron | 40.0% | |
GTTCACCAACATCAAAGACA+AGG | + | chr3_1:49865807-49865826 | None:intergenic | 40.0% | |
GTCCTGTTCTTCGAAAGATA+GGG | + | chr3_1:49865873-49865892 | None:intergenic | 40.0% | |
TGTCCTGTTCTTCGAAAGAT+AGG | + | chr3_1:49865874-49865893 | None:intergenic | 40.0% | |
ACTTGTGAACATGGCTGAAA+TGG | - | chr3_1:49865903-49865922 | Msa0360510:CDS | 40.0% | |
! | GGCTGAAATGGACTTGAAAA+AGG | - | chr3_1:49865915-49865934 | Msa0360510:intron | 40.0% |
ATCATGACGAAGAAGCTCAA+GGG | - | chr3_1:49866190-49866209 | Msa0360510:intron | 40.0% | |
GAGAACGAAGGTAATCCAAA+AGG | - | chr3_1:49866229-49866248 | Msa0360510:intron | 40.0% | |
AAAAATAAACAGCACGGAGG+GGG | + | chr3_1:49866281-49866300 | None:intergenic | 40.0% | |
TGTAATACCTTCAGCTCATG+AGG | + | chr3_1:49866538-49866557 | None:intergenic | 40.0% | |
!! | GGTGCATTCCCTATTTTAGA+AGG | + | chr3_1:49866726-49866745 | None:intergenic | 40.0% |
GAACTATCAGCTTTCTTTGC+GGG | + | chr3_1:49866747-49866766 | None:intergenic | 40.0% | |
! | TGAATCTTCTGATGACGATG+AGG | - | chr3_1:49866782-49866801 | Msa0360510:intron | 40.0% |
TTCACAGGAGAAACAACAAC+AGG | + | chr3_1:49867304-49867323 | None:intergenic | 40.0% | |
TTGACCTTGATATAGGCAAG+AGG | - | chr3_1:49867829-49867848 | Msa0360510:intron | 40.0% | |
TGAGGTTGCTGCTAAACAAA+AGG | - | chr3_1:49867905-49867924 | Msa0360510:intron | 40.0% | |
CACATCCTCAGATTCATCAA+AGG | + | chr3_1:49867964-49867983 | None:intergenic | 40.0% | |
CTTTGATGAATCTGAGGATG+TGG | - | chr3_1:49867962-49867981 | Msa0360510:intron | 40.0% | |
!!! | TCCCCATTTTGATTTTGAGG+GGG | - | chr3_1:49868085-49868104 | Msa0360510:intron | 40.0% |
TCCCCCTCAAAATCAAAATG+GGG | + | chr3_1:49868089-49868108 | None:intergenic | 40.0% | |
TAGCGAGAATAAACTAGGGT+TGG | - | chr3_1:49868120-49868139 | Msa0360510:intron | 40.0% | |
GTCAGATTCTTTCACACTGA+AGG | + | chr3_1:49868252-49868271 | None:intergenic | 40.0% | |
ATTCTTCCAACATTGTGGAG+AGG | - | chr3_1:49868357-49868376 | Msa0360510:intron | 40.0% | |
GAGGTTGTTGATGTATGTCT+TGG | - | chr3_1:49868376-49868395 | Msa0360510:intron | 40.0% | |
GTTGATGTATGTCTTGGTAC+TGG | - | chr3_1:49868382-49868401 | Msa0360510:intron | 40.0% | |
! | TGTCTTGGTACTGGAAAGAA+AGG | - | chr3_1:49868391-49868410 | Msa0360510:intron | 40.0% |
GGAAAGAAAGGAAAGCTACT+AGG | - | chr3_1:49868403-49868422 | Msa0360510:intron | 40.0% | |
! | GTTTCCAAGGCATTTGTTTC+TGG | - | chr3_1:49868524-49868543 | Msa0360510:intron | 40.0% |
GAATCCAGAAACAAATGCCT+TGG | + | chr3_1:49868531-49868550 | None:intergenic | 40.0% | |
TAAGAGTCTTGGAGAAGATG+GGG | - | chr3_1:49868694-49868713 | Msa0360510:CDS | 40.0% | |
GCTTACCACACAAACTACAA+AGG | - | chr3_1:49869244-49869263 | Msa0360510:intron | 40.0% | |
GGAAGATATAGGAGATTGGT+TGG | + | chr3_1:49869310-49869329 | None:intergenic | 40.0% | |
CAAACTTCTACCTAATCAGG+GGG | + | chr3_1:49869350-49869369 | None:intergenic | 40.0% | |
AAGAAACAGCTTCTGCTTCA+GGG | + | chr3_1:49869511-49869530 | None:intergenic | 40.0% | |
GGAATCTTCTGATGAAGATG+AGG | - | chr3_1:49869589-49869608 | Msa0360510:intron | 40.0% | |
!! | CCATTAGAGGTATCACTAGA+TGG | + | chr3_1:49869692-49869711 | None:intergenic | 40.0% |
CCATCTAGTGATACCTCTAA+TGG | - | chr3_1:49869689-49869708 | Msa0360510:intron | 40.0% | |
TTATGCAAGATATGTGTCCC+CGG | - | chr3_1:49869897-49869916 | Msa0360510:intron | 40.0% | |
AAACTTTCAAGATCCACGTC+AGG | + | chr3_1:49869985-49870004 | None:intergenic | 40.0% | |
TGACGTGGATCTTGAAAGTT+TGG | - | chr3_1:49869984-49870003 | Msa0360510:intron | 40.0% | |
TGACCACAACCATTACTCTT+CGG | + | chr3_1:49870090-49870109 | None:intergenic | 40.0% | |
!! | AAAGCGCTGAAAAGGACTTA+AGG | - | chr3_1:49870172-49870191 | Msa0360510:intron | 40.0% |
!! | AAGCGCTGAAAAGGACTTAA+GGG | - | chr3_1:49870173-49870192 | Msa0360510:intron | 40.0% |
CTTGCTACTAACACAGTAAC+AGG | + | chr3_1:49870397-49870416 | None:intergenic | 40.0% | |
CTGTTACTGTGTTAGTAGCA+AGG | - | chr3_1:49870395-49870414 | Msa0360510:intron | 40.0% | |
!! | AATCCATCAGAGTTGGTCTT+CGG | + | chr3_1:49870446-49870465 | None:intergenic | 40.0% |
GAAGAGTAATCCATCAGAGT+TGG | + | chr3_1:49870453-49870472 | None:intergenic | 40.0% | |
ATCATGACGAAGAAGTTCGA+GGG | - | chr3_1:49870545-49870564 | Msa0360510:intron | 40.0% | |
! | AGTGCCTTTTGCATTACCTT+CGG | + | chr3_1:49870594-49870613 | None:intergenic | 40.0% |
AGAATGACTGCCTCAACTAT+AGG | + | chr3_1:49870731-49870750 | None:intergenic | 40.0% | |
!! | AAGACAAGCATTTTAGCACG+AGG | - | chr3_1:49870792-49870811 | Msa0360510:intron | 40.0% |
!! | ATTTTAGCACGAGGAAGCAA+AGG | - | chr3_1:49870801-49870820 | Msa0360510:intron | 40.0% |
CATAGGCACATTGTTGAAAC+TGG | + | chr3_1:49870832-49870851 | None:intergenic | 40.0% | |
TGCCTATGCATTCTTTCAAC+TGG | - | chr3_1:49870844-49870863 | Msa0360510:intron | 40.0% | |
GACCAGTTGAAAGAATGCAT+AGG | + | chr3_1:49870849-49870868 | None:intergenic | 40.0% | |
ACAATTCACCACCATCAGAT+TGG | - | chr3_1:49870929-49870948 | Msa0360510:intron | 40.0% | |
CAATTCACCACCATCAGATT+GGG | - | chr3_1:49870930-49870949 | Msa0360510:intron | 40.0% | |
GCACCTATTGAATTGTCATG+TGG | + | chr3_1:49871079-49871098 | None:intergenic | 40.0% | |
CATGACAATTCAATAGGTGC+AGG | - | chr3_1:49871079-49871098 | Msa0360510:intron | 40.0% | |
TCACAGAAAACAAGTTCGAG+GGG | - | chr3_1:49871112-49871131 | Msa0360510:intron | 40.0% | |
ACAGTAGTAGAGTCAGATGA+GGG | - | chr3_1:49871145-49871164 | Msa0360510:intron | 40.0% | |
GTTGTCTTGGTTAAACCCAT+AGG | + | chr3_1:49871174-49871193 | None:intergenic | 40.0% | |
TTTCGCTCTTCATGTTGTCT+TGG | + | chr3_1:49871187-49871206 | None:intergenic | 40.0% | |
GGTGAACAAGAGTTGTTTGT+AGG | - | chr3_1:49871314-49871333 | Msa0360510:intron | 40.0% | |
!!! | TTTTGTTTTGCTGCTGCAGA+GGG | + | chr3_1:49871433-49871452 | None:intergenic | 40.0% |
! | TGAATGGCATTGGAATCCAA+AGG | + | chr3_1:49871568-49871587 | None:intergenic | 40.0% |
GTCTGTTCTATGAATGGCAT+TGG | + | chr3_1:49871578-49871597 | None:intergenic | 40.0% | |
CATTCATAGAACAGACAAGC+CGG | - | chr3_1:49871582-49871601 | Msa0360510:intron | 40.0% | |
GGTAGTCAAAATTAGTTCGC+AGG | - | chr3_1:49871864-49871883 | Msa0360510:intron | 40.0% | |
GGAATCCTTTCATGAATCTG+AGG | - | chr3_1:49871885-49871904 | Msa0360510:intron | 40.0% | |
CACATCCTCAGATTCATGAA+AGG | + | chr3_1:49871893-49871912 | None:intergenic | 40.0% | |
CTTTCATGAATCTGAGGATG+TGG | - | chr3_1:49871891-49871910 | Msa0360510:intron | 40.0% | |
! | GATGGAACAACTTTTGTTGC+AGG | + | chr3_1:49872019-49872038 | None:intergenic | 40.0% |
AGAACTATCAGCCTTCTTTG+CGG | + | chr3_1:49872291-49872310 | None:intergenic | 40.0% | |
CAGAAGATTCGTCAGATTCT+TGG | + | chr3_1:49872316-49872335 | None:intergenic | 40.0% | |
CAAGAATCTGACGAATCTTC+TGG | - | chr3_1:49872314-49872333 | Msa0360510:intron | 40.0% | |
GTAACCTTCTAACTCTTGGT+TGG | - | chr3_1:49872377-49872396 | Msa0360510:intron | 40.0% | |
AACACCAACCAAGAGTTAGA+AGG | + | chr3_1:49872384-49872403 | None:intergenic | 40.0% | |
TATGGTCTTCAACCCATTAG+GGG | + | chr3_1:49872456-49872475 | None:intergenic | 40.0% | |
GATATGGTCTTCAACCCATT+AGG | + | chr3_1:49872458-49872477 | None:intergenic | 40.0% | |
AGATGGAAGACCTGTTGATA+TGG | + | chr3_1:49872474-49872493 | None:intergenic | 40.0% | |
GGTCTTCCATCTTGCAAATA+AGG | - | chr3_1:49872482-49872501 | Msa0360510:intron | 40.0% | |
! | CTGTTCACATTTTGTGTAGC+AGG | + | chr3_1:49872614-49872633 | None:intergenic | 40.0% |
TGTACGTCTTGCTTCTCATA+AGG | - | chr3_1:49872803-49872822 | Msa0360510:intron | 40.0% | |
GATGGAAAGCTTAAAGGCTT+TGG | - | chr3_1:49872825-49872844 | Msa0360510:intron | 40.0% | |
GATGTCAAGAGCTTACGTAT+TGG | + | chr3_1:49872881-49872900 | None:intergenic | 40.0% | |
ACTCTTGTCTATTGTGTCGA+AGG | - | chr3_1:49872927-49872946 | Msa0360510:intron | 40.0% | |
TATAAACCAGGCCTATACCA+AGG | - | chr3_1:49873252-49873271 | Msa0360510:CDS | 40.0% | |
TATATACCTTGGTATAGGCC+TGG | + | chr3_1:49873261-49873280 | None:intergenic | 40.0% | |
GTTGTACTATGTTCTGCCAA+TGG | - | chr3_1:49873299-49873318 | Msa0360510:CDS | 40.0% | |
! | ATACATTGTTGCTTCAAGCG+TGG | - | chr3_1:49873435-49873454 | Msa0360510:CDS | 40.0% |
GAATGATGTCTTTCCTGACG+TGG | - | chr3_1:49865708-49865727 | Msa0360510:intron | 45.0% | |
GATCTCCTAGGCATTATCCT+CGG | - | chr3_1:49865778-49865797 | Msa0360510:intron | 45.0% | |
CATCAAAGACAAGGTAACCG+AGG | + | chr3_1:49865798-49865817 | None:intergenic | 45.0% | |
!! | GAACTGAAGCGTACTGGTTA+CGG | - | chr3_1:49865823-49865842 | Msa0360510:intron | 45.0% |
CATATCACTTCCCTCTTCGT+TGG | - | chr3_1:49865847-49865866 | Msa0360510:intron | 45.0% | |
AAAGATAGGGCCAACGAAGA+GGG | + | chr3_1:49865860-49865879 | None:intergenic | 45.0% | |
CTGTACCTGTGTTTGTAGCA+AGG | - | chr3_1:49866040-49866059 | Msa0360510:intron | 45.0% | |
!! | ATGCGTCAGTGTTGGTCTTT+GGG | + | chr3_1:49866090-49866109 | None:intergenic | 45.0% |
!! | AATGCGTCAGTGTTGGTCTT+TGG | + | chr3_1:49866091-49866110 | None:intergenic | 45.0% |
GAAGAGTAATGCGTCAGTGT+TGG | + | chr3_1:49866098-49866117 | None:intergenic | 45.0% | |
CTTCGAAAAGATGGGGTATG+AGG | - | chr3_1:49866117-49866136 | Msa0360510:CDS | 45.0% | |
CATCATGACGAAGAAGCTCA+AGG | - | chr3_1:49866189-49866208 | Msa0360510:intron | 45.0% | |
TCATGACGAAGAAGCTCAAG+GGG | - | chr3_1:49866191-49866210 | Msa0360510:intron | 45.0% | |
AAAATAAACAGCACGGAGGG+GGG | + | chr3_1:49866280-49866299 | None:intergenic | 45.0% | |
!! | GTTGTTTCTCCTGTGAAGTC+TGG | - | chr3_1:49867307-49867326 | Msa0360510:intron | 45.0% |
CCATTCATTCCAGACTTCAC+AGG | + | chr3_1:49867319-49867338 | None:intergenic | 45.0% | |
! | CCTGTGAAGTCTGGAATGAA+TGG | - | chr3_1:49867316-49867335 | Msa0360510:CDS | 45.0% |
CTTGCCTCTTGCCTATATCA+AGG | + | chr3_1:49867836-49867855 | None:intergenic | 45.0% | |
GCAAGCTGAGGAAGAAGTAA+AGG | - | chr3_1:49867851-49867870 | Msa0360510:intron | 45.0% | |
AGTGATCAGCTACGAACAAC+TGG | + | chr3_1:49868189-49868208 | None:intergenic | 45.0% | |
CAACAACCTCTCCACAATGT+TGG | + | chr3_1:49868366-49868385 | None:intergenic | 45.0% | |
TGTTGAGTTTGCAACTGCAG+AGG | - | chr3_1:49868435-49868454 | Msa0360510:intron | 45.0% | |
AGAGGATATCCACGAGGAAA+TGG | + | chr3_1:49868671-49868690 | None:intergenic | 45.0% | |
TCATTGTGCATGAGCCGAAA+GGG | + | chr3_1:49868733-49868752 | None:intergenic | 45.0% | |
ATCATTGTGCATGAGCCGAA+AGG | + | chr3_1:49868734-49868753 | None:intergenic | 45.0% | |
AGCTCACCCTAAGTCTAAAC+CGG | - | chr3_1:49868935-49868954 | Msa0360510:intron | 45.0% | |
! | CAAGCCAGTTGATACTCCTA+TGG | + | chr3_1:49869385-49869404 | None:intergenic | 45.0% |
GAAGAAACAGCTTCTGCTTC+AGG | + | chr3_1:49869512-49869531 | None:intergenic | 45.0% | |
GAGTGCACCTGAAAAGAAAG+CGG | - | chr3_1:49869541-49869560 | Msa0360510:intron | 45.0% | |
!! | GTTGTTTCTCCTGTGAAGTC+TGG | - | chr3_1:49867307-49867326 | Msa0360510:intron | 45.0% |
GTTTCTTAAGACCACATCCG+GGG | + | chr3_1:49869917-49869936 | None:intergenic | 45.0% | |
CGTTTCTTAAGACCACATCC+GGG | + | chr3_1:49869918-49869937 | None:intergenic | 45.0% | |
GCGTTTCTTAAGACCACATC+CGG | + | chr3_1:49869919-49869938 | None:intergenic | 45.0% | |
GGATTATCTCTTACCTGACG+TGG | - | chr3_1:49869969-49869988 | Msa0360510:intron | 45.0% | |
CATCAAAGATGACGTAACCG+AGG | + | chr3_1:49870059-49870078 | None:intergenic | 45.0% | |
GTCGTTGAACCGAAGAGTAA+TGG | - | chr3_1:49870078-49870097 | Msa0360510:intron | 45.0% | |
GAACCGAAGAGTAATGGTTG+TGG | - | chr3_1:49870084-49870103 | Msa0360510:intron | 45.0% | |
AACCCTATCTTTCGGAGAGA+AGG | - | chr3_1:49870129-49870148 | Msa0360510:intron | 45.0% | |
CTCCTTCTCTCCGAAAGATA+GGG | + | chr3_1:49870134-49870153 | None:intergenic | 45.0% | |
ACTCCTTCTCTCCGAAAGAT+AGG | + | chr3_1:49870135-49870154 | None:intergenic | 45.0% | |
AGGAGTCGCTTCTAAACTTG+TGG | - | chr3_1:49870149-49870168 | Msa0360510:intron | 45.0% | |
!! | ACTTGTGGAAAGCGCTGAAA+AGG | - | chr3_1:49870164-49870183 | Msa0360510:intron | 45.0% |
!! | ATCCATCAGAGTTGGTCTTC+GGG | + | chr3_1:49870445-49870464 | None:intergenic | 45.0% |
CGAAAAGATGGGGTATGAGA+AGG | - | chr3_1:49870475-49870494 | Msa0360510:intron | 45.0% | |
AAAGATGGGGTATGAGAAGG+AGG | - | chr3_1:49870478-49870497 | Msa0360510:intron | 45.0% | |
CATCATGACGAAGAAGTTCG+AGG | - | chr3_1:49870544-49870563 | Msa0360510:intron | 45.0% | |
TCATGACGAAGAAGTTCGAG+GGG | - | chr3_1:49870546-49870565 | Msa0360510:intron | 45.0% | |
GAGACCGAAGGTAATGCAAA+AGG | - | chr3_1:49870587-49870606 | Msa0360510:intron | 45.0% | |
GGCACATTGTTGAAACTGGT+TGG | + | chr3_1:49870828-49870847 | None:intergenic | 45.0% | |
AAAGTTGCCCAATCTGATGG+TGG | + | chr3_1:49870940-49870959 | None:intergenic | 45.0% | |
GACAGTAGTAGAGTCAGATG+AGG | - | chr3_1:49871144-49871163 | Msa0360510:intron | 45.0% | |
AGTCAGATGAGGGTAACCTA+TGG | - | chr3_1:49871155-49871174 | Msa0360510:intron | 45.0% | |
GTCAGATGAGGGTAACCTAT+GGG | - | chr3_1:49871156-49871175 | Msa0360510:intron | 45.0% | |
GCATATGGCAATCGTAGACT+TGG | + | chr3_1:49871286-49871305 | None:intergenic | 45.0% | |
TAGAAAACGGGCACTATGAC+AGG | - | chr3_1:49871390-49871409 | Msa0360510:intron | 45.0% | |
!!! | GTTTTGTTTTGCTGCTGCAG+AGG | + | chr3_1:49871434-49871453 | None:intergenic | 45.0% |
TTGTTTGCTTAGAGAGGCTG+AGG | + | chr3_1:49871513-49871532 | None:intergenic | 45.0% | |
ACGACAAACACTCCTTCCTT+TGG | - | chr3_1:49871549-49871568 | Msa0360510:intron | 45.0% | |
! | TGGCATTGGAATCCAAAGGA+AGG | + | chr3_1:49871564-49871583 | None:intergenic | 45.0% |
CGGCTTGTCTGTTCTATGAA+TGG | + | chr3_1:49871584-49871603 | None:intergenic | 45.0% | |
AGAAGTGGAAGAGCTAGTGA+AGG | + | chr3_1:49871655-49871674 | None:intergenic | 45.0% | |
TCCTAGCTCGATTCAAAAGC+CGG | - | chr3_1:49871703-49871722 | Msa0360510:intron | 45.0% | |
TGAGGTTGCTGCCAAACAAA+AGG | - | chr3_1:49871834-49871853 | Msa0360510:intron | 45.0% | |
! | TACAGGTGCACTCCCATTTT+TGG | + | chr3_1:49872041-49872060 | None:intergenic | 45.0% |
!! | GGTGCACTTCCTATTTTGGA+AGG | + | chr3_1:49872269-49872288 | None:intergenic | 45.0% |
GAACTATCAGCCTTCTTTGC+GGG | + | chr3_1:49872290-49872309 | None:intergenic | 45.0% | |
CGAATCTTCTGGTGAAGATG+AGG | - | chr3_1:49872325-49872344 | Msa0360510:intron | 45.0% | |
GGGTTGAAGACCATATCAAC+AGG | - | chr3_1:49872461-49872480 | Msa0360510:intron | 45.0% | |
! | GTCAGATTTTTGCACACCGA+AGG | + | chr3_1:49872669-49872688 | None:intergenic | 45.0% |
CGTCTTGCTTCTCATAAGGA+TGG | - | chr3_1:49872807-49872826 | Msa0360510:intron | 45.0% | |
TGTTGAGTTTGCAACTGCAG+AGG | - | chr3_1:49868435-49868454 | Msa0360510:intron | 45.0% | |
! | CTGTCCGACTTGATTTAGCT+CGG | - | chr3_1:49873027-49873046 | Msa0360510:CDS | 45.0% |
! | TGTCCGACTTGATTTAGCTC+GGG | - | chr3_1:49873028-49873047 | Msa0360510:CDS | 45.0% |
TCTCCCGAGCTAAATCAAGT+CGG | + | chr3_1:49873034-49873053 | None:intergenic | 45.0% | |
! | ACTTGATTTAGCTCGGGAGA+GGG | - | chr3_1:49873034-49873053 | Msa0360510:CDS | 45.0% |
CGTGCAGGATTCTATAAACC+AGG | - | chr3_1:49873240-49873259 | Msa0360510:CDS | 45.0% | |
!! | AGAAAAATATTTAATTAAAA+CGG | + | chr3_1:49869474-49869493 | None:intergenic | 5.0% |
GTTGCAGCAGATGATCTCCT+AGG | - | chr3_1:49865766-49865785 | Msa0360510:intron | 50.0% | |
GGTAACCGAGGATAATGCCT+AGG | + | chr3_1:49865786-49865805 | None:intergenic | 50.0% | |
! | GTTGGTGAACTGAAGCGTAC+TGG | - | chr3_1:49865817-49865836 | Msa0360510:intron | 50.0% |
GAAAGATAGGGCCAACGAAG+AGG | + | chr3_1:49865861-49865880 | None:intergenic | 50.0% | |
GGCCCTATCTTTCGAAGAAC+AGG | - | chr3_1:49865868-49865887 | Msa0360510:intron | 50.0% | |
! | CGCTACTCGACTTGTGAACA+TGG | - | chr3_1:49865894-49865913 | Msa0360510:intron | 50.0% |
CAGCACCTTGCTACAAACAC+AGG | + | chr3_1:49866048-49866067 | None:intergenic | 50.0% | |
CGAAAAGATGGGGTATGAGG+AGG | - | chr3_1:49866120-49866139 | Msa0360510:CDS | 50.0% | |
AAAGATGGGGTATGAGGAGG+AGG | - | chr3_1:49866123-49866142 | Msa0360510:CDS | 50.0% | |
AAATAAACAGCACGGAGGGG+GGG | + | chr3_1:49866279-49866298 | None:intergenic | 50.0% | |
GGTCTGTCCTGATGAAGATG+AGG | - | chr3_1:49866564-49866583 | Msa0360510:intron | 50.0% | |
TATAGGCAAGAGGCAAGCTG+AGG | - | chr3_1:49867839-49867858 | Msa0360510:intron | 50.0% | |
ATGTCGAGAGCTTACGCGTT+TGG | + | chr3_1:49868464-49868483 | None:intergenic | 50.0% | |
ACTTCCGGGCTTCTTCAAGT+CGG | + | chr3_1:49868643-49868662 | None:intergenic | 50.0% | |
CATTGTGCATGAGCCGAAAG+GGG | + | chr3_1:49868732-49868751 | None:intergenic | 50.0% | |
TTCTCCTGTGAAGTCTGGAG+CGG | - | chr3_1:49869855-49869874 | Msa0360510:intron | 50.0% | |
AAGATATGTGTCCCCGGATG+TGG | - | chr3_1:49869903-49869922 | Msa0360510:intron | 50.0% | |
!! | ATCAGAGTTGGTCTTCGGGA+CGG | + | chr3_1:49870441-49870460 | None:intergenic | 50.0% |
GGGGAAGCAGATGCATTATG+CGG | - | chr3_1:49870565-49870584 | Msa0360510:intron | 50.0% | |
ATGCATTATGCGGAGACCGA+AGG | - | chr3_1:49870575-49870594 | Msa0360510:intron | 50.0% | |
CTTAGAGAGGCTGAGGTATG+CGG | + | chr3_1:49871506-49871525 | None:intergenic | 50.0% | |
! | TCCGGCTTTTGAATCGAGCT+AGG | + | chr3_1:49871707-49871726 | None:intergenic | 50.0% |
TATAGGCAAGAGGCAAGCTG+TGG | - | chr3_1:49867839-49867858 | Msa0360510:intron | 50.0% | |
!! | GGTGCACTCCCATTTTTGGA+TGG | + | chr3_1:49872037-49872056 | None:intergenic | 50.0% |
GAAGGAACAACTTCTGCTGC+AGG | + | chr3_1:49872251-49872270 | None:intergenic | 50.0% | |
! | TGCGGGTGCACTTCCTATTT+TGG | + | chr3_1:49872273-49872292 | None:intergenic | 50.0% |
GGGTACCCACGAATGAATGT+AGG | + | chr3_1:49872436-49872455 | None:intergenic | 50.0% | |
TCATTCGTGGGTACCCCTAA+TGG | - | chr3_1:49872440-49872459 | Msa0360510:intron | 50.0% | |
CATTCGTGGGTACCCCTAAT+GGG | - | chr3_1:49872441-49872460 | Msa0360510:intron | 50.0% | |
! | GACTTGATTTAGCTCGGGAG+AGG | - | chr3_1:49873033-49873052 | Msa0360510:CDS | 50.0% |
! | CTTGATTTAGCTCGGGAGAG+GGG | - | chr3_1:49873035-49873054 | Msa0360510:CDS | 50.0% |
CAAGGGGAAGCAGATGCATG+CGG | - | chr3_1:49866207-49866226 | Msa0360510:intron | 55.0% | |
CAGATGCATGCGGAGAACGA+AGG | - | chr3_1:49866217-49866236 | Msa0360510:intron | 55.0% | |
AATAAACAGCACGGAGGGGG+GGG | + | chr3_1:49866278-49866297 | None:intergenic | 55.0% | |
TCAGCTCATGAGGCTCGTTC+AGG | + | chr3_1:49866528-49866547 | None:intergenic | 55.0% | |
GAACGAGCCTCATGAGCTGA+AGG | - | chr3_1:49866528-49866547 | Msa0360510:CDS | 55.0% | |
GAAGGAACAGCTTCTGCTGC+AGG | + | chr3_1:49866708-49866727 | None:intergenic | 55.0% | |
GGGCAACAACTGTTGCAACG+TGG | - | chr3_1:49868614-49868633 | Msa0360510:CDS | 55.0% | |
! | GTGTCCGACTTGAAGAAGCC+CGG | - | chr3_1:49868636-49868655 | Msa0360510:CDS | 55.0% |
GACTTGAAGAAGCCCGGAAG+TGG | - | chr3_1:49868642-49868661 | Msa0360510:CDS | 55.0% | |
AGGAAATGGACGCCACTTCC+GGG | + | chr3_1:49868657-49868676 | None:intergenic | 55.0% | |
GAGGAAATGGACGCCACTTC+CGG | + | chr3_1:49868658-49868677 | None:intergenic | 55.0% | |
AAGTGGCGTCCATTTCCTCG+TGG | - | chr3_1:49868659-49868678 | Msa0360510:CDS | 55.0% | |
GGGGAGCCTCTATCAGATTC+AGG | + | chr3_1:49869331-49869350 | None:intergenic | 55.0% | |
GATAGAGGCTCCCCCTGATT+AGG | - | chr3_1:49869337-49869356 | Msa0360510:intron | 55.0% | |
GATCGCCAAGACGCTATCCT+CGG | - | chr3_1:49870039-49870058 | Msa0360510:intron | 55.0% | |
CGTAACCGAGGATAGCGTCT+TGG | + | chr3_1:49870047-49870066 | None:intergenic | 55.0% | |
!! | TCAGAGTTGGTCTTCGGGAC+GGG | + | chr3_1:49870440-49870459 | None:intergenic | 55.0% |
GTCCCGAAGACCAACTCTGA+TGG | - | chr3_1:49870440-49870459 | Msa0360510:intron | 55.0% | |
TTTGCTGCTGCAGAGGGCTT+AGG | + | chr3_1:49871427-49871446 | None:intergenic | 55.0% | |
GCAAGCTGTGGAAGAAGTCG+AGG | - | chr3_1:49871783-49871802 | Msa0360510:intron | 55.0% | |
! | AGGAAGTGCACCCGCAAAGA+AGG | - | chr3_1:49872277-49872296 | Msa0360510:intron | 55.0% |
TGGACTGTTTACAGGCGTGC+AGG | - | chr3_1:49873225-49873244 | Msa0360510:intron | 55.0% | |
GTCTCTTACGACCACACCCG+GGG | + | chr3_1:49865656-49865675 | None:intergenic | 60.0% | |
CGTCTCTTACGACCACACCC+GGG | + | chr3_1:49865657-49865676 | None:intergenic | 60.0% | |
GCGTCTCTTACGACCACACC+CGG | + | chr3_1:49865658-49865677 | None:intergenic | 60.0% | |
GATGGGGTATGAGGAGGAGG+CGG | - | chr3_1:49866126-49866145 | Msa0360510:CDS | 60.0% | |
ATAAACAGCACGGAGGGGGG+GGG | + | chr3_1:49866277-49866296 | None:intergenic | 60.0% | |
! | TCCTGTGAAGTCTGGAGCGG+AGG | - | chr3_1:49869858-49869877 | Msa0360510:intron | 60.0% |
TCCTCCGCTCCAGACTTCAC+AGG | + | chr3_1:49869862-49869881 | None:intergenic | 60.0% | |
TAAACAGCACGGAGGGGGGG+GGG | + | chr3_1:49866276-49866295 | None:intergenic | 65.0% | |
TGCTGCAGAGGGCTTAGGCG+GGG | + | chr3_1:49871422-49871441 | None:intergenic | 65.0% | |
CTGCTGCAGAGGGCTTAGGC+GGG | + | chr3_1:49871423-49871442 | None:intergenic | 65.0% | |
GCTGCTGCAGAGGGCTTAGG+CGG | + | chr3_1:49871424-49871443 | None:intergenic | 65.0% | |
GCTGCAGAGGGCTTAGGCGG+GGG | + | chr3_1:49871421-49871440 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 49865646 | 49873524 | 49865646 | ID=Msa0360510;Name=Msa0360510 |
chr3_1 | mRNA | 49865646 | 49873524 | 49865646 | ID=Msa0360510-mRNA-1;Parent=Msa0360510;Name=Msa0360510-mRNA-1;_AED=0.13;_eAED=0.15;_QI=0|0|0|0.91|0.54|0.58|12|0|454 |
chr3_1 | exon | 49873419 | 49873524 | 49873419 | ID=Msa0360510-mRNA-1:exon:8777;Parent=Msa0360510-mRNA-1 |
chr3_1 | exon | 49873234 | 49873397 | 49873234 | ID=Msa0360510-mRNA-1:exon:8776;Parent=Msa0360510-mRNA-1 |
chr3_1 | exon | 49872932 | 49873112 | 49872932 | ID=Msa0360510-mRNA-1:exon:8775;Parent=Msa0360510-mRNA-1 |
chr3_1 | exon | 49868970 | 49869142 | 49868970 | ID=Msa0360510-mRNA-1:exon:8774;Parent=Msa0360510-mRNA-1 |
chr3_1 | exon | 49868574 | 49868757 | 49868574 | ID=Msa0360510-mRNA-1:exon:8773;Parent=Msa0360510-mRNA-1 |
chr3_1 | exon | 49867315 | 49867394 | 49867315 | ID=Msa0360510-mRNA-1:exon:8772;Parent=Msa0360510-mRNA-1 |
chr3_1 | exon | 49867044 | 49867157 | 49867044 | ID=Msa0360510-mRNA-1:exon:8771;Parent=Msa0360510-mRNA-1 |
chr3_1 | exon | 49866480 | 49866568 | 49866480 | ID=Msa0360510-mRNA-1:exon:8770;Parent=Msa0360510-mRNA-1 |
chr3_1 | exon | 49866286 | 49866403 | 49866286 | ID=Msa0360510-mRNA-1:exon:8769;Parent=Msa0360510-mRNA-1 |
chr3_1 | exon | 49866089 | 49866180 | 49866089 | ID=Msa0360510-mRNA-1:exon:8768;Parent=Msa0360510-mRNA-1 |
chr3_1 | exon | 49865897 | 49865931 | 49865897 | ID=Msa0360510-mRNA-1:exon:8767;Parent=Msa0360510-mRNA-1 |
chr3_1 | exon | 49865646 | 49865674 | 49865646 | ID=Msa0360510-mRNA-1:exon:8766;Parent=Msa0360510-mRNA-1 |
chr3_1 | CDS | 49873419 | 49873524 | 49873419 | ID=Msa0360510-mRNA-1:cds;Parent=Msa0360510-mRNA-1 |
chr3_1 | CDS | 49873234 | 49873397 | 49873234 | ID=Msa0360510-mRNA-1:cds;Parent=Msa0360510-mRNA-1 |
chr3_1 | CDS | 49872932 | 49873112 | 49872932 | ID=Msa0360510-mRNA-1:cds;Parent=Msa0360510-mRNA-1 |
chr3_1 | CDS | 49868970 | 49869142 | 49868970 | ID=Msa0360510-mRNA-1:cds;Parent=Msa0360510-mRNA-1 |
chr3_1 | CDS | 49868574 | 49868757 | 49868574 | ID=Msa0360510-mRNA-1:cds;Parent=Msa0360510-mRNA-1 |
chr3_1 | CDS | 49867315 | 49867394 | 49867315 | ID=Msa0360510-mRNA-1:cds;Parent=Msa0360510-mRNA-1 |
chr3_1 | CDS | 49867044 | 49867157 | 49867044 | ID=Msa0360510-mRNA-1:cds;Parent=Msa0360510-mRNA-1 |
chr3_1 | CDS | 49866480 | 49866568 | 49866480 | ID=Msa0360510-mRNA-1:cds;Parent=Msa0360510-mRNA-1 |
chr3_1 | CDS | 49866286 | 49866403 | 49866286 | ID=Msa0360510-mRNA-1:cds;Parent=Msa0360510-mRNA-1 |
chr3_1 | CDS | 49866089 | 49866180 | 49866089 | ID=Msa0360510-mRNA-1:cds;Parent=Msa0360510-mRNA-1 |
chr3_1 | CDS | 49865897 | 49865931 | 49865897 | ID=Msa0360510-mRNA-1:cds;Parent=Msa0360510-mRNA-1 |
chr3_1 | CDS | 49865646 | 49865674 | 49865646 | ID=Msa0360510-mRNA-1:cds;Parent=Msa0360510-mRNA-1 |
Gene Sequence |
Protein sequence |