Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0583510 | XP_003606622.2 | 93.333 | 465 | 8 | 3 | 11 | 465 | 2 | 453 | 0.0 | 888 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0583510 | 0.819050 | 1.423695e-52 | -8.615850e-47 |
| Msa0055150 | Msa0583510 | 0.801600 | 8.340137e-49 | -8.615850e-47 |
| Msa0104610 | Msa0583510 | 0.807055 | 6.093129e-50 | -8.615850e-47 |
| Msa0239940 | Msa0583510 | 0.821141 | 4.728030e-53 | -8.615850e-47 |
| Msa0267870 | Msa0583510 | 0.800643 | 1.308955e-48 | -8.615850e-47 |
| Msa0308200 | Msa0583510 | 0.803503 | 3.379002e-49 | -8.615850e-47 |
| Msa0308220 | Msa0583510 | 0.821356 | 4.217144e-53 | -8.615850e-47 |
| Msa0536790 | Msa0583510 | 0.823023 | 1.731239e-53 | -8.615850e-47 |
| Msa0580950 | Msa0583510 | 0.803398 | 3.553979e-49 | -8.615850e-47 |
| Msa0583510 | Msa0644020 | 0.804348 | 2.255057e-49 | -8.615850e-47 |
| Msa0583510 | Msa0647930 | 0.804988 | 1.658132e-49 | -8.615850e-47 |
| Msa0583510 | Msa0737800 | 0.810204 | 1.294990e-50 | -8.615850e-47 |
| Msa0583510 | Msa0756930 | 0.807586 | 4.700911e-50 | -8.615850e-47 |
| Msa0583510 | Msa0817260 | 0.827904 | 1.209008e-54 | -8.615850e-47 |
| Msa0583510 | Msa0817270 | 0.806940 | 6.443000e-50 | -8.615850e-47 |
| Msa0583510 | Msa1028290 | 0.804400 | 2.199876e-49 | -8.615850e-47 |
| Msa0583510 | Msa1408150 | 0.812581 | 3.944166e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0583510 | MtrunA17_Chr4g0030901 | 93.333 | 465 | 8 | 3 | 11 | 465 | 2 | 453 | 0.0 | 888 |
| Msa0583510 | MtrunA17_Chr1g0182221 | 39.400 | 533 | 232 | 13 | 11 | 457 | 2 | 529 | 5.88e-106 | 325 |
| Msa0583510 | MtrunA17_Chr7g0222931 | 37.569 | 543 | 241 | 15 | 11 | 462 | 2 | 537 | 1.52e-98 | 306 |
| Msa0583510 | MtrunA17_Chr1g0182481 | 46.377 | 138 | 73 | 1 | 318 | 454 | 242 | 379 | 6.42e-38 | 147 |
| Msa0583510 | MtrunA17_Chr7g0265211 | 33.835 | 133 | 85 | 2 | 311 | 440 | 228 | 360 | 1.60e-16 | 82.4 |
| Msa0583510 | MtrunA17_Chr2g0320451 | 30.822 | 146 | 84 | 2 | 293 | 432 | 200 | 334 | 1.18e-15 | 80.1 |
| Msa0583510 | MtrunA17_Chr1g0179841 | 33.594 | 128 | 81 | 1 | 317 | 440 | 82 | 209 | 2.70e-14 | 75.5 |
| Msa0583510 | MtrunA17_Chr2g0320431 | 32.110 | 109 | 68 | 1 | 330 | 432 | 23 | 131 | 4.80e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0583510 | AT5G59830.3 | 43.871 | 465 | 210 | 13 | 11 | 465 | 2 | 425 | 1.00e-114 | 344 |
| Msa0583510 | AT5G59830.1 | 43.871 | 465 | 210 | 13 | 11 | 465 | 2 | 425 | 1.00e-114 | 344 |
| Msa0583510 | AT5G59830.2 | 43.871 | 465 | 210 | 13 | 11 | 465 | 2 | 425 | 1.00e-114 | 344 |
| Msa0583510 | AT5G13660.2 | 46.429 | 224 | 116 | 2 | 244 | 465 | 314 | 535 | 1.00e-58 | 202 |
| Msa0583510 | AT5G13660.1 | 46.637 | 223 | 116 | 2 | 244 | 465 | 314 | 534 | 1.30e-58 | 202 |
| Msa0583510 | AT3G53680.2 | 41.808 | 177 | 94 | 4 | 280 | 448 | 126 | 301 | 5.20e-37 | 145 |
| Msa0583510 | AT3G53680.1 | 41.808 | 177 | 94 | 4 | 280 | 448 | 126 | 301 | 5.58e-37 | 145 |
| Msa0583510 | AT2G37520.1 | 46.565 | 131 | 69 | 1 | 329 | 458 | 171 | 301 | 4.33e-35 | 139 |
| Msa0583510 | AT5G13660.4 | 36.496 | 137 | 83 | 2 | 244 | 378 | 314 | 448 | 3.67e-17 | 84.0 |
| Msa0583510 | AT5G13660.6 | 36.765 | 136 | 83 | 2 | 244 | 378 | 314 | 447 | 4.83e-17 | 83.6 |
| Msa0583510 | AT5G13660.7 | 36.765 | 136 | 83 | 2 | 244 | 378 | 314 | 447 | 4.83e-17 | 83.6 |
| Msa0583510 | AT2G36720.1 | 37.000 | 100 | 60 | 1 | 331 | 427 | 261 | 360 | 8.27e-14 | 74.7 |
| Msa0583510 | AT2G36720.2 | 37.000 | 100 | 60 | 1 | 331 | 427 | 261 | 360 | 8.27e-14 | 74.7 |
| Msa0583510 | AT2G27980.1 | 29.310 | 116 | 75 | 2 | 330 | 439 | 377 | 491 | 7.88e-11 | 65.1 |
Find 142 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTAATTGATCGATTATT+TGG | 0.067636 | 4_2:-2165464 | Msa0583510:CDS |
| TCTGAACCATGTATGAATTT+TGG | 0.091302 | 4_2:-2165299 | Msa0583510:CDS |
| ATCGATCAATTAATTGATTT+TGG | 0.128367 | 4_2:+2165471 | None:intergenic |
| CGTGAGCTTCAACGGATTTA+TGG | 0.136181 | 4_2:-2164060 | Msa0583510:CDS |
| CGAAATGCTTTCTGATTTAT+TGG | 0.172704 | 4_2:+2164246 | None:intergenic |
| TTTGATATCTTGTTTATTCT+TGG | 0.187546 | 4_2:+2164788 | None:intergenic |
| GTGTCAAACAATGAACTTTC+AGG | 0.198974 | 4_2:+2164291 | None:intergenic |
| TTCCTGTACTATTTGATAAA+TGG | 0.243583 | 4_2:+2164326 | None:intergenic |
| TATGGAGATGGTGCATCTTT+TGG | 0.252084 | 4_2:-2165350 | Msa0583510:CDS |
| GAGCAAGACTTGTTAATTTC+GGG | 0.270886 | 4_2:-2163762 | Msa0583510:three_prime_UTR |
| CTTTACAAAACAAGGGATTC+TGG | 0.272026 | 4_2:-2165724 | Msa0583510:CDS |
| GGAGCAAGACTTGTTAATTT+CGG | 0.278962 | 4_2:-2163763 | Msa0583510:three_prime_UTR |
| ATCAGAAAGCATTTCGCATT+TGG | 0.289716 | 4_2:-2164239 | Msa0583510:CDS |
| AGACCGTTTGGCACCCCTTA+TGG | 0.301042 | 4_2:-2165065 | Msa0583510:CDS |
| TCTATTGCTTGCTTCTTGTT+TGG | 0.301219 | 4_2:+2165584 | None:intergenic |
| TTGTTTAGCTCTGTGACTTT+TGG | 0.301431 | 4_2:-2163926 | Msa0583510:three_prime_UTR |
| TCAAAATAAATGTGATTGTT+TGG | 0.311141 | 4_2:+2164360 | None:intergenic |
| GAACTTCGTGGAATTATAAA+AGG | 0.315503 | 4_2:-2164580 | Msa0583510:CDS |
| TCATGTTCGTGGGTGATTAA+AGG | 0.319909 | 4_2:-2163784 | Msa0583510:three_prime_UTR |
| AACCATTGATGAGGTCGTTT+TGG | 0.320545 | 4_2:+2165635 | None:intergenic |
| AAGGGATTCTGGATGGTAAA+AGG | 0.325602 | 4_2:-2165713 | Msa0583510:CDS |
| GAGATAGCACCCCGTTCATC+TGG | 0.326401 | 4_2:+2164963 | None:intergenic |
| CGAAGGAAAGAGAGAGGAAT+AGG | 0.330377 | 4_2:+2168015 | None:intergenic |
| GAGACAAATATAATTTCTTT+TGG | 0.334047 | 4_2:-2164993 | Msa0583510:CDS |
| AAGATGATCGCAAATCATTA+TGG | 0.336592 | 4_2:-2165368 | Msa0583510:CDS |
| AGCACCTAATCCCAATGATT+TGG | 0.339666 | 4_2:+2163845 | None:intergenic |
| TGTTATCTACTTTGCCATAA+GGG | 0.349075 | 4_2:+2165051 | None:intergenic |
| ATGTCCAAATCATTGGGATT+AGG | 0.354920 | 4_2:-2163849 | Msa0583510:three_prime_UTR |
| TAAGCGGTTACCTTAGAAAA+TGG | 0.360905 | 4_2:+2167890 | None:intergenic |
| GTAACTTATGTCCAAATCAT+TGG | 0.363263 | 4_2:-2163856 | Msa0583510:three_prime_UTR |
| TTATTCTTGGACATAGATTC+AGG | 0.367033 | 4_2:+2164801 | None:intergenic |
| TCATCTAGGTAGGTGGTAAT+AGG | 0.369142 | 4_2:+2168064 | None:intergenic |
| TGGTGGGTTCCCAGATGAAC+GGG | 0.370149 | 4_2:-2164973 | Msa0583510:CDS |
| TGGTGCATTGTGTAACTTGT+TGG | 0.377027 | 4_2:-2163906 | Msa0583510:three_prime_UTR |
| TTCTGGATGGTAAAAGGATC+TGG | 0.378698 | 4_2:-2165707 | Msa0583510:CDS |
| GTTGGTTTCACTCAAAAGAT+TGG | 0.382596 | 4_2:-2163888 | Msa0583510:three_prime_UTR |
| GAGACGAGATCTGGATCAAC+AGG | 0.382783 | 4_2:-2165158 | Msa0583510:CDS |
| CTATTCCTCTCTCTTTCCTT+CGG | 0.386939 | 4_2:-2168014 | Msa0583510:five_prime_UTR |
| ATCAAGCTCCTGACATTAGT+AGG | 0.391092 | 4_2:+2164735 | None:intergenic |
| AATTAATTGATCGATTATTT+GGG | 0.397385 | 4_2:-2165463 | Msa0583510:CDS |
| GTGTTATCTACTTTGCCATA+AGG | 0.399952 | 4_2:+2165050 | None:intergenic |
| ACATTAGTAGGGAAGGTGTT+TGG | 0.404286 | 4_2:+2164747 | None:intergenic |
| CAAAGATGGTGGGGACTTAG+AGG | 0.407569 | 4_2:+2164022 | None:intergenic |
| GCGCAAACTTAACTTAGGTT+AGG | 0.418573 | 4_2:-2164000 | Msa0583510:three_prime_UTR |
| TGTAGTTGCAAGTTCTCCTT+TGG | 0.419163 | 4_2:-2164838 | Msa0583510:CDS |
| GAGATGATCGGAACCCTAAC+CGG | 0.420588 | 4_2:+2167967 | None:intergenic |
| GGGGAAGTTGAGACGAGATC+TGG | 0.422910 | 4_2:-2165167 | Msa0583510:CDS |
| ATCAAATAGTACAGGAATTG+AGG | 0.425574 | 4_2:-2164320 | Msa0583510:CDS |
| AATACCTACGTTTCGGGCGA+TGG | 0.429341 | 4_2:-2165407 | Msa0583510:CDS |
| CCACGAGATTTCCTCAATTG+AGG | 0.431996 | 4_2:-2168094 | None:intergenic |
| TAACTTATGTCCAAATCATT+GGG | 0.436654 | 4_2:-2163855 | Msa0583510:three_prime_UTR |
| AAAGGAACTACCTATCTTTG+TGG | 0.443908 | 4_2:-2164562 | Msa0583510:CDS |
| CTTGCAGTCTTTACAAAACA+AGG | 0.446967 | 4_2:-2165732 | Msa0583510:intron |
| TGACTGACACCCACAAAGAT+AGG | 0.451929 | 4_2:+2164552 | None:intergenic |
| ATATCTACTGGTATGCTAGA+TGG | 0.454824 | 4_2:-2164714 | Msa0583510:CDS |
| GGGGTGCTATCTCTGTGGGC+AGG | 0.457264 | 4_2:-2164953 | Msa0583510:CDS |
| GATGCCCGTATCAGACCGTT+TGG | 0.458600 | 4_2:-2165077 | Msa0583510:CDS |
| GCAAATGAAAGATCTAGTTC+AGG | 0.460327 | 4_2:-2165557 | Msa0583510:CDS |
| TAATTTCGGGGCACTGAACT+CGG | 0.466461 | 4_2:-2163749 | Msa0583510:three_prime_UTR |
| ATGGGACTTGCCTATGGCAG+TGG | 0.470833 | 4_2:-2165101 | Msa0583510:CDS |
| TCTTTGCGCAAACTTAACTT+AGG | 0.471362 | 4_2:-2164005 | Msa0583510:three_prime_UTR |
| TTCAGTGAAATTGACAGGCC+TGG | 0.472169 | 4_2:+2165433 | None:intergenic |
| GGGTGCTATCTCTGTGGGCA+GGG | 0.474025 | 4_2:-2164952 | Msa0583510:CDS |
| GGGTGCCAAACGGTCTGATA+CGG | 0.474649 | 4_2:+2165072 | None:intergenic |
| GTCAGGAGCTTGATATCTAC+TGG | 0.476574 | 4_2:-2164726 | Msa0583510:CDS |
| GAAGGAAAGAGAGAGGAATA+GGG | 0.478845 | 4_2:+2168016 | None:intergenic |
| TTGGTGGGTTCCCAGATGAA+CGG | 0.479213 | 4_2:-2164974 | Msa0583510:CDS |
| GATCTACACCATGTCTATCA+TGG | 0.482318 | 4_2:-2165188 | Msa0583510:CDS |
| TGTCAAACAATGAACTTTCA+GGG | 0.482656 | 4_2:+2164292 | None:intergenic |
| CTCTAGAAAGCTCATGTTCG+TGG | 0.485379 | 4_2:-2163795 | Msa0583510:three_prime_UTR |
| AAGTTAAGTTTGCGCAAAGA+TGG | 0.494942 | 4_2:+2164008 | None:intergenic |
| GATTATTTGGGTCTGAAACC+AGG | 0.501220 | 4_2:-2165451 | Msa0583510:CDS |
| TTATGGATGCAGGAACTTCG+TGG | 0.502569 | 4_2:-2164592 | Msa0583510:intron |
| ATCTACACCATGTCTATCAT+GGG | 0.502576 | 4_2:-2165187 | Msa0583510:CDS |
| CTGTCAAAATTATGTTGCTC+TGG | 0.503021 | 4_2:+2165224 | None:intergenic |
| TTGGAAGGATTATCAAATGC+CGG | 0.504114 | 4_2:+2165665 | None:intergenic |
| AGAGAGGAATAGGGTGTGTG+AGG | 0.506327 | 4_2:+2168025 | None:intergenic |
| CAGCAACACGTGAGCTTCAA+CGG | 0.506790 | 4_2:-2164068 | Msa0583510:CDS |
| GAAGTATGTCTCGGTGGCGC+GGG | 0.512915 | 4_2:-2164682 | Msa0583510:CDS |
| ACGGGCATCCCCACTGCCAT+AGG | 0.513675 | 4_2:+2165091 | None:intergenic |
| TCTGGAGCTTGCACATCACT+AGG | 0.513874 | 4_2:+2165242 | None:intergenic |
| AAGGAACTACCTATCTTTGT+GGG | 0.520214 | 4_2:-2164561 | Msa0583510:CDS |
| TATAAGATTCAGCAATGGAT+AGG | 0.522976 | 4_2:+2165024 | None:intergenic |
| GTTATCTACTTTGCCATAAG+GGG | 0.524676 | 4_2:+2165052 | None:intergenic |
| GGTTTCACTCAAAAGATTGG+AGG | 0.526129 | 4_2:-2163885 | Msa0583510:three_prime_UTR |
| GACCATTTATCAAATAGTAC+AGG | 0.526696 | 4_2:-2164328 | Msa0583510:CDS |
| TGAAGTATGTCTCGGTGGCG+CGG | 0.530846 | 4_2:-2164683 | Msa0583510:CDS |
| AACCAAAACGACCTCATCAA+TGG | 0.536411 | 4_2:-2165637 | Msa0583510:CDS |
| GACATTGCCATCCTTGTCAA+AGG | 0.543189 | 4_2:+2165130 | None:intergenic |
| TTGCCATAAGGGGTGCCAAA+CGG | 0.546220 | 4_2:+2165062 | None:intergenic |
| TAAGTTTGCGCAAAGATGGT+GGG | 0.548142 | 4_2:+2164012 | None:intergenic |
| TGGGACTTGCCTATGGCAGT+GGG | 0.549439 | 4_2:-2165100 | Msa0583510:CDS |
| GGTGCCAAACGGTCTGATAC+GGG | 0.551701 | 4_2:+2165073 | None:intergenic |
| AAAGCATTTCGCATTTGGAA+AGG | 0.553389 | 4_2:-2164234 | Msa0583510:intron |
| TGGTTAATTGATGCAACTGA+AGG | 0.554560 | 4_2:-2165617 | Msa0583510:CDS |
| AACAGCTCATGAGAAAGAGT+TGG | 0.557874 | 4_2:-2164877 | Msa0583510:CDS |
| ACACCTTCCCTACTAATGTC+AGG | 0.559082 | 4_2:-2164743 | Msa0583510:CDS |
| TTAAGTTTGCGCAAAGATGG+TGG | 0.560921 | 4_2:+2164011 | None:intergenic |
| ATCGCAAATCATTATGGAGA+TGG | 0.565757 | 4_2:-2165362 | Msa0583510:CDS |
| TTCGAGTTTGAAAAGCATGC+TGG | 0.566420 | 4_2:-2164399 | Msa0583510:CDS |
| GGGCAAGCCTTTGACAAGGA+TGG | 0.567272 | 4_2:-2165137 | Msa0583510:CDS |
| GGTTAATTGATGCAACTGAA+GGG | 0.567822 | 4_2:-2165616 | Msa0583510:CDS |
| GAACGGGGTGCTATCTCTGT+GGG | 0.567929 | 4_2:-2164957 | Msa0583510:CDS |
| AATTGATAGCATTATAGAAG+CGG | 0.574748 | 4_2:+2167919 | None:intergenic |
| GAAAGCCGAAGGAAAGAGAG+AGG | 0.575601 | 4_2:+2168009 | None:intergenic |
| GCATGTTAGTGACAGAGAGC+CGG | 0.576985 | 4_2:-2165684 | Msa0583510:CDS |
| GTATGTCTCGGTGGCGCGGG+AGG | 0.577134 | 4_2:-2164679 | Msa0583510:intron |
| TCTGGATGGTAAAAGGATCT+GGG | 0.577994 | 4_2:-2165706 | Msa0583510:CDS |
| TAGGATATGAACCTCAATTG+AGG | 0.578513 | 4_2:+2168083 | None:intergenic |
| ACAAAACAAGGGATTCTGGA+TGG | 0.579040 | 4_2:-2165720 | Msa0583510:CDS |
| GTTAATTGATGCAACTGAAG+GGG | 0.584842 | 4_2:-2165615 | Msa0583510:CDS |
| AGAACCATCGCCCGAAACGT+AGG | 0.586722 | 4_2:+2165403 | None:intergenic |
| TCAAGCTCCTGACATTAGTA+GGG | 0.592776 | 4_2:+2164736 | None:intergenic |
| GCTCCTGACATTAGTAGGGA+AGG | 0.594371 | 4_2:+2164740 | None:intergenic |
| AGATAGCACCCCGTTCATCT+GGG | 0.596404 | 4_2:+2164964 | None:intergenic |
| TTGCAGTCTTTACAAAACAA+GGG | 0.608181 | 4_2:-2165731 | Msa0583510:intron |
| TTTATTATAAGATTCAGCAA+TGG | 0.610633 | 4_2:+2165019 | None:intergenic |
| AGCAAGACTTGTTAATTTCG+GGG | 0.610779 | 4_2:-2163761 | Msa0583510:three_prime_UTR |
| TCTAGAAAGCTCATGTTCGT+GGG | 0.612589 | 4_2:-2163794 | Msa0583510:three_prime_UTR |
| TTCGAATACACAAGAAAACT+CGG | 0.618560 | 4_2:-2163693 | Msa0583510:three_prime_UTR |
| CAACTTCCCCATGATAGACA+TGG | 0.618862 | 4_2:+2165180 | None:intergenic |
| TCTGTACCATCGGAGATGAT+CGG | 0.619826 | 4_2:+2167955 | None:intergenic |
| GCATCAATTAACCATTGATG+AGG | 0.620118 | 4_2:+2165626 | None:intergenic |
| TCAGTCATGTAACTATTCCA+AGG | 0.620903 | 4_2:-2164536 | Msa0583510:intron |
| ATATGACTGTTCATAGTCTG+TGG | 0.620918 | 4_2:+2164926 | None:intergenic |
| GCCACCGAGACATACTTCAC+AGG | 0.621034 | 4_2:+2164687 | None:intergenic |
| ATAGCATTATAGAAGCGGAA+TGG | 0.623880 | 4_2:+2167924 | None:intergenic |
| GTCAAACAATGAACTTTCAG+GGG | 0.632047 | 4_2:+2164293 | None:intergenic |
| AGGGTTCCGATCATCTCCGA+TGG | 0.636826 | 4_2:-2167961 | Msa0583510:five_prime_UTR |
| GGTTACACGATCTGTACCAT+CGG | 0.638882 | 4_2:+2167945 | None:intergenic |
| ACGGCGGCGGAGAAAGCCGA+AGG | 0.646765 | 4_2:+2167998 | None:intergenic |
| AACAGGGCAAGCCTTTGACA+AGG | 0.649294 | 4_2:-2165141 | Msa0583510:CDS |
| AAGTTTGCGCAAAGATGGTG+GGG | 0.650497 | 4_2:+2164013 | None:intergenic |
| TGAACGGGGTGCTATCTCTG+TGG | 0.655993 | 4_2:-2164958 | Msa0583510:CDS |
| GGTGGGTTCCCAGATGAACG+GGG | 0.659474 | 4_2:-2164972 | Msa0583510:CDS |
| GGGACTTGCCTATGGCAGTG+GGG | 0.687403 | 4_2:-2165099 | Msa0583510:CDS |
| TGTTCCTGTGAAGTATGTCT+CGG | 0.693290 | 4_2:-2164691 | Msa0583510:CDS |
| TCCTGTGAAGTATGTCTCGG+TGG | 0.694815 | 4_2:-2164688 | Msa0583510:CDS |
| CTAGAATCCATCAACCCATG+AGG | 0.695569 | 4_2:+2163652 | None:intergenic |
| TCTACACCATGTCTATCATG+GGG | 0.701654 | 4_2:-2165186 | Msa0583510:CDS |
| AACAAGATATCAAATCAACA+AGG | 0.715980 | 4_2:-2164779 | Msa0583510:CDS |
| AGACGAGATCTGGATCAACA+GGG | 0.736721 | 4_2:-2165157 | Msa0583510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACATTAAATCTAAAAAA+GGG | + | chr4_2:2165199-2165218 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAACAACT+TGG | + | chr4_2:2165891-2165910 | None:intergenic | 10.0% |
| !! | AATTAATTAATTAAGAAGAG+TGG | + | chr4_2:2164062-2164081 | None:intergenic | 15.0% |
| !!! | TTTATTTTTTGTCATTGAAT+TGG | - | chr4_2:2164504-2164523 | Msa0583510:intron | 15.0% |
| !!! | ATTTTTTAGAGTAAAATTTG+AGG | - | chr4_2:2164746-2164765 | Msa0583510:CDS | 15.0% |
| !!! | TTTTTTAGAGTAAAATTTGA+GGG | - | chr4_2:2164747-2164766 | Msa0583510:CDS | 15.0% |
| !! | AAACATTAAATCTAAAAAAG+GGG | + | chr4_2:2165198-2165217 | None:intergenic | 15.0% |
| !! | CTAAACATTAAATCTAAAAA+AGG | + | chr4_2:2165200-2165219 | None:intergenic | 15.0% |
| !!! | TCTTTTTTTTAAATGTTCTT+GGG | + | chr4_2:2165744-2165763 | None:intergenic | 15.0% |
| !!! | TTCTTTTTTTTAAATGTTCT+TGG | + | chr4_2:2165745-2165764 | None:intergenic | 15.0% |
| !!! | ATTTTATACAATGCAATAAT+AGG | - | chr4_2:2165820-2165839 | Msa0583510:intron | 15.0% |
| !! | AATTAATTGATCGATTATTT+GGG | - | chr4_2:2166293-2166312 | Msa0583510:intron | 15.0% |
| !! | TAAAGGAATATAACTTATAA+AGG | + | chr4_2:2167147-2167166 | None:intergenic | 15.0% |
| !! | TTATAAGTTATATTCCTTTA+TGG | - | chr4_2:2167147-2167166 | Msa0583510:intron | 15.0% |
| !! | TAATATAAAACATCAATCAA+AGG | + | chr4_2:2167321-2167340 | None:intergenic | 15.0% |
| !!! | ATTGATGTTTTATATTATCA+GGG | - | chr4_2:2167324-2167343 | Msa0583510:intron | 15.0% |
| !!! | AAATGTTGAATTTTATTGTT+TGG | - | chr4_2:2167596-2167615 | Msa0583510:intron | 15.0% |
| !!! | AATGTTGAATTTTATTGTTT+GGG | - | chr4_2:2167597-2167616 | Msa0583510:intron | 15.0% |
| !!! | AATTTTTTCACCATTTTCTA+AGG | - | chr4_2:2163856-2163875 | Msa0583510:three_prime_UTR | 20.0% |
| !!! | TGAATTCTATGAATTTTGTT+TGG | - | chr4_2:2163947-2163966 | Msa0583510:three_prime_UTR | 20.0% |
| !!! | TTCAAGTTATAAACTTTCTA+AGG | + | chr4_2:2164139-2164158 | None:intergenic | 20.0% |
| !! | ATATTGTTAGTTATGTTAAG+AGG | - | chr4_2:2164350-2164369 | Msa0583510:CDS | 20.0% |
| !! | TATTGTTAGTTATGTTAAGA+GGG | - | chr4_2:2164351-2164370 | Msa0583510:CDS | 20.0% |
| !!! | AGTCTATGACATTTTAATAA+TGG | - | chr4_2:2164445-2164464 | Msa0583510:intron | 20.0% |
| !! | TTGTGTTAATGTTAATATGA+TGG | - | chr4_2:2164569-2164588 | Msa0583510:CDS | 20.0% |
| !! | TGTGTTAATGTTAATATGAT+GGG | - | chr4_2:2164570-2164589 | Msa0583510:CDS | 20.0% |
| !! | TTGGATAAACAATTTAAATG+AGG | - | chr4_2:2165021-2165040 | Msa0583510:CDS | 20.0% |
| !! | TGGATAAACAATTTAAATGA+GGG | - | chr4_2:2165022-2165041 | Msa0583510:CDS | 20.0% |
| !! | TATGAATTTCTTAATTGATG+AGG | - | chr4_2:2165120-2165139 | Msa0583510:CDS | 20.0% |
| !! | TTGCATTGTATAAAATACAA+GGG | + | chr4_2:2165816-2165835 | None:intergenic | 20.0% |
| !! | ATTGCATTGTATAAAATACA+AGG | + | chr4_2:2165817-2165836 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAACAACTTGG+TGG | + | chr4_2:2165888-2165907 | None:intergenic | 20.0% |
| !!! | ATCGATCAATTAATTGATTT+TGG | + | chr4_2:2166288-2166307 | None:intergenic | 20.0% |
| !! | CAATTAATTGATCGATTATT+TGG | - | chr4_2:2166292-2166311 | Msa0583510:intron | 20.0% |
| !! | TTTATTATAAGATTCAGCAA+TGG | + | chr4_2:2166740-2166759 | None:intergenic | 20.0% |
| !!! | GAGACAAATATAATTTCTTT+TGG | - | chr4_2:2166763-2166782 | Msa0583510:intron | 20.0% |
| !!! | ACAAATATAATTTCTTTTGG+TGG | - | chr4_2:2166766-2166785 | Msa0583510:intron | 20.0% |
| !!! | CAAATATAATTTCTTTTGGT+GGG | - | chr4_2:2166767-2166786 | Msa0583510:intron | 20.0% |
| !!! | TTTGATATCTTGTTTATTCT+TGG | + | chr4_2:2166971-2166990 | None:intergenic | 20.0% |
| !! | AAAACCATTATTAAGATGTT+TGG | + | chr4_2:2167273-2167292 | None:intergenic | 20.0% |
| !!! | GATTGATGTTTTATATTATC+AGG | - | chr4_2:2167323-2167342 | Msa0583510:intron | 20.0% |
| !! | TCAAAATAAATGTGATTGTT+TGG | + | chr4_2:2167399-2167418 | None:intergenic | 20.0% |
| !!! | AATCACATTTATTTTGAGAA+TGG | - | chr4_2:2167402-2167421 | Msa0583510:intron | 20.0% |
| !!! | ATCACATTTATTTTGAGAAT+GGG | - | chr4_2:2167403-2167422 | Msa0583510:intron | 20.0% |
| !! | AAGACAAATAAAAATGTTAC+AGG | + | chr4_2:2168045-2168064 | None:intergenic | 20.0% |
| !!! | AATATTTTAATTGTTCCTCA+TGG | - | chr4_2:2168089-2168108 | Msa0583510:five_prime_UTR | 20.0% |
| !! | AATTGATAGCATTATAGAAG+CGG | + | chr4_2:2163840-2163859 | None:intergenic | 25.0% |
| !!! | AAATCTATAGTGGATTTTTC+AGG | - | chr4_2:2164168-2164187 | Msa0583510:intron | 25.0% |
| ! | AAAATGTCATAGACTAATCT+GGG | + | chr4_2:2164440-2164459 | None:intergenic | 25.0% |
| ! | TAAAATGTCATAGACTAATC+TGG | + | chr4_2:2164441-2164460 | None:intergenic | 25.0% |
| !!! | CTATGTTTGTTATCTGAAAT+TGG | - | chr4_2:2164593-2164612 | Msa0583510:intron | 25.0% |
| ! | ACTATCAATCAGAAATTCAA+GGG | + | chr4_2:2164856-2164875 | None:intergenic | 25.0% |
| ! | AACTATCAATCAGAAATTCA+AGG | + | chr4_2:2164857-2164876 | None:intergenic | 25.0% |
| !! | TTGAATTTCTGATTGATAGT+TGG | - | chr4_2:2164856-2164875 | Msa0583510:CDS | 25.0% |
| !!! | CACTTTTTCTTCTTCTAAAT+TGG | - | chr4_2:2164886-2164905 | Msa0583510:CDS | 25.0% |
| ! | AGTCAAATGCATATCATTAA+GGG | - | chr4_2:2164926-2164945 | Msa0583510:CDS | 25.0% |
| ! | TAAGATATTATGCTTCTGTT+TGG | - | chr4_2:2165002-2165021 | Msa0583510:CDS | 25.0% |
| !!! | AATGGATTGTGATAAAAGAA+AGG | - | chr4_2:2165055-2165074 | Msa0583510:CDS | 25.0% |
| ! | CTAATTTAAATGAGCTAGTT+AGG | - | chr4_2:2165092-2165111 | Msa0583510:CDS | 25.0% |
| ! | AAATTTGAGGGATAAATCAT+AGG | - | chr4_2:2165149-2165168 | Msa0583510:CDS | 25.0% |
| ! | AGACAGTGATAAGTTAATAA+TGG | + | chr4_2:2165714-2165733 | None:intergenic | 25.0% |
| ! | TATTAACTTATCACTGTCTA+AGG | - | chr4_2:2165715-2165734 | Msa0583510:CDS | 25.0% |
| ! | TGCATTGTATAAAATACAAG+GGG | + | chr4_2:2165815-2165834 | None:intergenic | 25.0% |
| !! | AAATGTAAATTTTACTCCGT+GGG | - | chr4_2:2166228-2166247 | Msa0583510:intron | 25.0% |
| !!! | GATCAATTAATTGATTTTGG+TGG | + | chr4_2:2166285-2166304 | None:intergenic | 25.0% |
| !!! | TTTTTTTCAGTGAAATTGAC+AGG | + | chr4_2:2166331-2166350 | None:intergenic | 25.0% |
| ! | TGAAAAAAATACCTACGTTT+CGG | - | chr4_2:2166342-2166361 | Msa0583510:intron | 25.0% |
| ! | AACAAGATATCAAATCAACA+AGG | - | chr4_2:2166977-2166996 | Msa0583510:intron | 25.0% |
| ! | TTCCTGTACTATTTGATAAA+TGG | + | chr4_2:2167433-2167452 | None:intergenic | 25.0% |
| ! | TAACTTATGTCCAAATCATT+GGG | - | chr4_2:2167901-2167920 | Msa0583510:CDS | 25.0% |
| !! | AATTAAGAAGAGTGGATTAG+TGG | + | chr4_2:2164054-2164073 | None:intergenic | 30.0% |
| AGTGAAGAACAAATCTATAG+TGG | - | chr4_2:2164158-2164177 | Msa0583510:intron | 30.0% | |
| ! | GTTATCTGAAATTGGAATTG+AGG | - | chr4_2:2164601-2164620 | Msa0583510:intron | 30.0% |
| ! | ATGCTTCATGTTTTCCTTTT+GGG | - | chr4_2:2164638-2164657 | Msa0583510:intron | 30.0% |
| !!! | CATTCTACGATCTTATTTTG+AGG | - | chr4_2:2164723-2164742 | Msa0583510:CDS | 30.0% |
| !! | TTTGACTCCTCTAAAGTAAA+GGG | + | chr4_2:2164913-2164932 | None:intergenic | 30.0% |
| !! | ATTTGACTCCTCTAAAGTAA+AGG | + | chr4_2:2164914-2164933 | None:intergenic | 30.0% |
| GAGTCAAATGCATATCATTA+AGG | - | chr4_2:2164925-2164944 | Msa0583510:CDS | 30.0% | |
| CAATTTAAATGAGGGCTTAA+AGG | - | chr4_2:2165030-2165049 | Msa0583510:CDS | 30.0% | |
| GAATTTCTTAATTGATGAGG+AGG | - | chr4_2:2165123-2165142 | Msa0583510:CDS | 30.0% | |
| TTTGATTATGTCACACAACT+AGG | + | chr4_2:2165252-2165271 | None:intergenic | 30.0% | |
| CAGAAAAGAAGATAAACTGA+AGG | + | chr4_2:2165275-2165294 | None:intergenic | 30.0% | |
| GTTGAAATGTAATAGAAGCA+TGG | - | chr4_2:2165441-2165460 | Msa0583510:CDS | 30.0% | |
| ATGGAAGAGAAAAGAAAAGA+GGG | - | chr4_2:2165460-2165479 | Msa0583510:CDS | 30.0% | |
| ! | ATGATTTTCCACATTTCCTT+TGG | + | chr4_2:2165551-2165570 | None:intergenic | 30.0% |
| ! | GGGATAAAACTCATTCTTTT+TGG | + | chr4_2:2165578-2165597 | None:intergenic | 30.0% |
| TATAAAATACAAGGGGAAGA+GGG | + | chr4_2:2165808-2165827 | None:intergenic | 30.0% | |
| TTAATCAATCCAACTGACAT+AGG | + | chr4_2:2165934-2165953 | None:intergenic | 30.0% | |
| TTGCAGTCTTTACAAAACAA+GGG | - | chr4_2:2166025-2166044 | Msa0583510:intron | 30.0% | |
| ! | CAAATGTAAATTTTACTCCG+TGG | - | chr4_2:2166227-2166246 | Msa0583510:intron | 30.0% |
| !! | TTAATTGATTTTGGTGGCTT+GGG | + | chr4_2:2166279-2166298 | None:intergenic | 30.0% |
| !! | ATTAATTGATTTTGGTGGCT+TGG | + | chr4_2:2166280-2166299 | None:intergenic | 30.0% |
| GAAAAAAATACCTACGTTTC+GGG | - | chr4_2:2166343-2166362 | Msa0583510:intron | 30.0% | |
| AAGATGATCGCAAATCATTA+TGG | - | chr4_2:2166388-2166407 | Msa0583510:intron | 30.0% | |
| ! | TCTGAACCATGTATGAATTT+TGG | - | chr4_2:2166457-2166476 | Msa0583510:intron | 30.0% |
| ! | CTGAACCATGTATGAATTTT+GGG | - | chr4_2:2166458-2166477 | Msa0583510:intron | 30.0% |
| ! | TGAACCATGTATGAATTTTG+GGG | - | chr4_2:2166459-2166478 | Msa0583510:intron | 30.0% |
| CAAGAAAGTCAAAGTAAATC+AGG | - | chr4_2:2166486-2166505 | Msa0583510:intron | 30.0% | |
| !!! | GATGGCAATGTCATTTTAAT+GGG | - | chr4_2:2166637-2166656 | Msa0583510:intron | 30.0% |
| TGTTATCTACTTTGCCATAA+GGG | + | chr4_2:2166708-2166727 | None:intergenic | 30.0% | |
| TATAAGATTCAGCAATGGAT+AGG | + | chr4_2:2166735-2166754 | None:intergenic | 30.0% | |
| TTATTCTTGGACATAGATTC+AGG | + | chr4_2:2166958-2166977 | None:intergenic | 30.0% | |
| TTATATTCCTTTATGGATGC+AGG | - | chr4_2:2167154-2167173 | Msa0583510:intron | 30.0% | |
| GAACTTCGTGGAATTATAAA+AGG | - | chr4_2:2167176-2167195 | Msa0583510:intron | 30.0% | |
| CTGACCAAACATCTTAATAA+TGG | - | chr4_2:2167266-2167285 | Msa0583510:intron | 30.0% | |
| ATCAATCAAAGGTAATCTAC+AGG | + | chr4_2:2167310-2167329 | None:intergenic | 30.0% | |
| GACCATTTATCAAATAGTAC+AGG | - | chr4_2:2167428-2167447 | Msa0583510:intron | 30.0% | |
| ATCAAATAGTACAGGAATTG+AGG | - | chr4_2:2167436-2167455 | Msa0583510:intron | 30.0% | |
| TGTCAAACAATGAACTTTCA+GGG | + | chr4_2:2167467-2167486 | None:intergenic | 30.0% | |
| ! | GACACAATCCAAACAATTTT+TGG | - | chr4_2:2167483-2167502 | Msa0583510:intron | 30.0% |
| CGAAATGCTTTCTGATTTAT+TGG | + | chr4_2:2167513-2167532 | None:intergenic | 30.0% | |
| TAGTCTGTTTGTGCTTAAAA+AGG | + | chr4_2:2167563-2167582 | None:intergenic | 30.0% | |
| TTTAAGCACAAACAGACTAA+TGG | - | chr4_2:2167564-2167583 | Msa0583510:intron | 30.0% | |
| !! | TTTTATTGTTTGGGCTTGTT+TGG | - | chr4_2:2167606-2167625 | Msa0583510:intron | 30.0% |
| GTAACTTATGTCCAAATCAT+TGG | - | chr4_2:2167900-2167919 | Msa0583510:intron | 30.0% | |
| TTCGAATACACAAGAAAACT+CGG | - | chr4_2:2168063-2168082 | Msa0583510:five_prime_UTR | 30.0% | |
| TAGGATATGAACCTCAATTG+AGG | + | chr4_2:2163676-2163695 | None:intergenic | 35.0% | |
| !!! | TTTTTTCTCATCTAGGTAGG+TGG | + | chr4_2:2163702-2163721 | None:intergenic | 35.0% |
| !!! | CGATTTTTTCTCATCTAGGT+AGG | + | chr4_2:2163705-2163724 | None:intergenic | 35.0% |
| !!! | CACTCGATTTTTTCTCATCT+AGG | + | chr4_2:2163709-2163728 | None:intergenic | 35.0% |
| ATAGCATTATAGAAGCGGAA+TGG | + | chr4_2:2163835-2163854 | None:intergenic | 35.0% | |
| TAAGCGGTTACCTTAGAAAA+TGG | + | chr4_2:2163869-2163888 | None:intergenic | 35.0% | |
| GCTCAAGAATTATGAGTAAG+CGG | + | chr4_2:2163885-2163904 | None:intergenic | 35.0% | |
| ! | CCATTTGATTCAACTTTTGC+AGG | + | chr4_2:2164205-2164224 | None:intergenic | 35.0% |
| CCTGCAAAAGTTGAATCAAA+TGG | - | chr4_2:2164202-2164221 | Msa0583510:intron | 35.0% | |
| AAATTGTGAAGGGCCAAATT+GGG | + | chr4_2:2164381-2164400 | None:intergenic | 35.0% | |
| AAAATTGTGAAGGGCCAAAT+TGG | + | chr4_2:2164382-2164401 | None:intergenic | 35.0% | |
| !!! | AATTTTTTCGTGGCCCAATT+CGG | - | chr4_2:2164396-2164415 | Msa0583510:CDS | 35.0% |
| ! | TTGTTGTTAGAGACCGAATT+GGG | + | chr4_2:2164412-2164431 | None:intergenic | 35.0% |
| !! | TTTGTTGTTAGAGACCGAAT+TGG | + | chr4_2:2164413-2164432 | None:intergenic | 35.0% |
| ACAAATTAGTCCCTATGTCA+GGG | - | chr4_2:2164470-2164489 | Msa0583510:intron | 35.0% | |
| CCAAATTATTCCCTGACATA+GGG | + | chr4_2:2164483-2164502 | None:intergenic | 35.0% | |
| CCTATGTCAGGGAATAATTT+GGG | - | chr4_2:2164481-2164500 | Msa0583510:intron | 35.0% | |
| ! | GATGCTTCATGTTTTCCTTT+TGG | - | chr4_2:2164637-2164656 | Msa0583510:intron | 35.0% |
| ! | TGCTTCATGTTTTCCTTTTG+GGG | - | chr4_2:2164639-2164658 | Msa0583510:intron | 35.0% |
| TAGACGAGACAAAAATGAGA+TGG | - | chr4_2:2164692-2164711 | Msa0583510:CDS | 35.0% | |
| AGACGAGACAAAAATGAGAT+GGG | - | chr4_2:2164693-2164712 | Msa0583510:CDS | 35.0% | |
| CAATCAGAAATTCAAGGGTT+TGG | + | chr4_2:2164851-2164870 | None:intergenic | 35.0% | |
| AATTGGACCCTTTACTTTAG+AGG | - | chr4_2:2164903-2164922 | Msa0583510:CDS | 35.0% | |
| CATGACAGGCTTCATATAAT+TGG | - | chr4_2:2164949-2164968 | Msa0583510:CDS | 35.0% | |
| AATGAGGGCTTAAAGGAAAA+TGG | - | chr4_2:2165037-2165056 | Msa0583510:CDS | 35.0% | |
| TGTCACAGTCATATGTCATT+TGG | - | chr4_2:2165317-2165336 | Msa0583510:CDS | 35.0% | |
| CATGGAAGAGAAAAGAAAAG+AGG | - | chr4_2:2165459-2165478 | Msa0583510:CDS | 35.0% | |
| TAACGTTCTACCATACAACT+AGG | - | chr4_2:2165497-2165516 | Msa0583510:CDS | 35.0% | |
| CCTATTGAATCCTAGTTGTA+TGG | + | chr4_2:2165510-2165529 | None:intergenic | 35.0% | |
| CCATACAACTAGGATTCAAT+AGG | - | chr4_2:2165507-2165526 | Msa0583510:intron | 35.0% | |
| GGAATTTACCAAAGGAAATG+TGG | - | chr4_2:2165540-2165559 | Msa0583510:intron | 35.0% | |
| !! | GGGTTTGGTGAGTATAAAAT+GGG | + | chr4_2:2165598-2165617 | None:intergenic | 35.0% |
| !! | AGGGTTTGGTGAGTATAAAA+TGG | + | chr4_2:2165599-2165618 | None:intergenic | 35.0% |
| TTCACCTATCCAAACTAGTA+GGG | - | chr4_2:2165669-2165688 | Msa0583510:CDS | 35.0% | |
| ATAAAATACAAGGGGAAGAG+GGG | + | chr4_2:2165807-2165826 | None:intergenic | 35.0% | |
| GTATAAAATACAAGGGGAAG+AGG | + | chr4_2:2165809-2165828 | None:intergenic | 35.0% | |
| ATCCAACTGACATAGGATAA+AGG | + | chr4_2:2165927-2165946 | None:intergenic | 35.0% | |
| CTTGCAGTCTTTACAAAACA+AGG | - | chr4_2:2166024-2166043 | Msa0583510:intron | 35.0% | |
| CTTTACAAAACAAGGGATTC+TGG | - | chr4_2:2166032-2166051 | Msa0583510:intron | 35.0% | |
| TTGGAAGGATTATCAAATGC+CGG | + | chr4_2:2166094-2166113 | None:intergenic | 35.0% | |
| GCATCAATTAACCATTGATG+AGG | + | chr4_2:2166133-2166152 | None:intergenic | 35.0% | |
| TGGTTAATTGATGCAACTGA+AGG | - | chr4_2:2166139-2166158 | Msa0583510:intron | 35.0% | |
| GGTTAATTGATGCAACTGAA+GGG | - | chr4_2:2166140-2166159 | Msa0583510:intron | 35.0% | |
| GTTAATTGATGCAACTGAAG+GGG | - | chr4_2:2166141-2166160 | Msa0583510:intron | 35.0% | |
| TCTATTGCTTGCTTCTTGTT+TGG | + | chr4_2:2166175-2166194 | None:intergenic | 35.0% | |
| ! | GCAAATGAAAGATCTAGTTC+AGG | - | chr4_2:2166199-2166218 | Msa0583510:intron | 35.0% |
| AAATTGTGATTGTTCTCCCA+CGG | + | chr4_2:2166247-2166266 | None:intergenic | 35.0% | |
| ATCGCAAATCATTATGGAGA+TGG | - | chr4_2:2166394-2166413 | Msa0583510:intron | 35.0% | |
| ! | GAACCATGTATGAATTTTGG+GGG | - | chr4_2:2166460-2166479 | Msa0583510:intron | 35.0% |
| ATTCCCCCAAAATTCATACA+TGG | + | chr4_2:2166466-2166485 | None:intergenic | 35.0% | |
| CTGTCAAAATTATGTTGCTC+TGG | + | chr4_2:2166535-2166554 | None:intergenic | 35.0% | |
| !! | CAGAGCAACATAATTTTGAC+AGG | - | chr4_2:2166533-2166552 | Msa0583510:intron | 35.0% |
| !! | TAATTTTGACAGGCAGAGTA+TGG | - | chr4_2:2166543-2166562 | Msa0583510:intron | 35.0% |
| !! | AATTTTGACAGGCAGAGTAT+GGG | - | chr4_2:2166544-2166563 | Msa0583510:intron | 35.0% |
| ATCTACACCATGTCTATCAT+GGG | - | chr4_2:2166569-2166588 | Msa0583510:intron | 35.0% | |
| !!! | GGATGGCAATGTCATTTTAA+TGG | - | chr4_2:2166636-2166655 | Msa0583510:intron | 35.0% |
| !! | ATTTTAATGGGACTTGCCTA+TGG | - | chr4_2:2166649-2166668 | Msa0583510:intron | 35.0% |
| GTTATCTACTTTGCCATAAG+GGG | + | chr4_2:2166707-2166726 | None:intergenic | 35.0% | |
| GTGTTATCTACTTTGCCATA+AGG | + | chr4_2:2166709-2166728 | None:intergenic | 35.0% | |
| ATATGACTGTTCATAGTCTG+TGG | + | chr4_2:2166833-2166852 | None:intergenic | 35.0% | |
| ATATCTACTGGTATGCTAGA+TGG | - | chr4_2:2167042-2167061 | Msa0583510:intron | 35.0% | |
| AAAGGAACTACCTATCTTTG+TGG | - | chr4_2:2167194-2167213 | Msa0583510:intron | 35.0% | |
| AAGGAACTACCTATCTTTGT+GGG | - | chr4_2:2167195-2167214 | Msa0583510:intron | 35.0% | |
| TCAGTCATGTAACTATTCCA+AGG | - | chr4_2:2167220-2167239 | Msa0583510:intron | 35.0% | |
| TTCCAAGGTTAGTAATCCAT+TGG | - | chr4_2:2167235-2167254 | Msa0583510:intron | 35.0% | |
| !! | TACCAATGGATTACTAACCT+TGG | + | chr4_2:2167240-2167259 | None:intergenic | 35.0% |
| GTCAAACAATGAACTTTCAG+GGG | + | chr4_2:2167466-2167485 | None:intergenic | 35.0% | |
| GTGTCAAACAATGAACTTTC+AGG | + | chr4_2:2167468-2167487 | None:intergenic | 35.0% | |
| TTGGTGCACCAAAAATTGTT+TGG | + | chr4_2:2167494-2167513 | None:intergenic | 35.0% | |
| !! | ATCAGAAAGCATTTCGCATT+TGG | - | chr4_2:2167517-2167536 | Msa0583510:intron | 35.0% |
| ! | AAAGCATTTCGCATTTGGAA+AGG | - | chr4_2:2167522-2167541 | Msa0583510:intron | 35.0% |
| TGTTTGTGCTTAAAAAGGTC+GGG | + | chr4_2:2167558-2167577 | None:intergenic | 35.0% | |
| CTGTTTGTGCTTAAAAAGGT+CGG | + | chr4_2:2167559-2167578 | None:intergenic | 35.0% | |
| GGCAAGAGTTGCAAAAAAAT+GGG | + | chr4_2:2167644-2167663 | None:intergenic | 35.0% | |
| TGGCAAGAGTTGCAAAAAAA+TGG | + | chr4_2:2167645-2167664 | None:intergenic | 35.0% | |
| !!! | TTTTTTGCAACTCTTGCCAA+TGG | - | chr4_2:2167646-2167665 | Msa0583510:intron | 35.0% |
| ! | GAAATGATTCTGAAGACCAT+TGG | + | chr4_2:2167665-2167684 | None:intergenic | 35.0% |
| AAGTTAAGTTTGCGCAAAGA+TGG | + | chr4_2:2167751-2167770 | None:intergenic | 35.0% | |
| TCTTTGCGCAAACTTAACTT+AGG | - | chr4_2:2167751-2167770 | Msa0583510:intron | 35.0% | |
| !!! | TTGTTTAGCTCTGTGACTTT+TGG | - | chr4_2:2167830-2167849 | Msa0583510:intron | 35.0% |
| ! | GTTGGTTTCACTCAAAAGAT+TGG | - | chr4_2:2167868-2167887 | Msa0583510:intron | 35.0% |
| ATGTCCAAATCATTGGGATT+AGG | - | chr4_2:2167907-2167926 | Msa0583510:CDS | 35.0% | |
| !! | GGAGCAAGACTTGTTAATTT+CGG | - | chr4_2:2167993-2168012 | Msa0583510:five_prime_UTR | 35.0% |
| !! | GAGCAAGACTTGTTAATTTC+GGG | - | chr4_2:2167994-2168013 | Msa0583510:five_prime_UTR | 35.0% |
| !! | AGCAAGACTTGTTAATTTCG+GGG | - | chr4_2:2167995-2168014 | Msa0583510:five_prime_UTR | 35.0% |
| TCATCTAGGTAGGTGGTAAT+AGG | + | chr4_2:2163695-2163714 | None:intergenic | 40.0% | |
| GAAGGAAAGAGAGAGGAATA+GGG | + | chr4_2:2163743-2163762 | None:intergenic | 40.0% | |
| CTATTCCTCTCTCTTTCCTT+CGG | - | chr4_2:2163742-2163761 | Msa0583510:three_prime_UTR | 40.0% | |
| ! | ACCCTAACCGGAGATTTTTA+CGG | + | chr4_2:2163780-2163799 | None:intergenic | 40.0% |
| CTGCAACAACGAAACAACAT+AGG | + | chr4_2:2164114-2164133 | None:intergenic | 40.0% | |
| !! | CTATGTTGTTTCGTTGTTGC+AGG | - | chr4_2:2164112-2164131 | Msa0583510:intron | 40.0% |
| ACTTTGACCTATTTGCGAGA+GGG | + | chr4_2:2164328-2164347 | None:intergenic | 40.0% | |
| TTAAGAGGGTAGACCCAATT+TGG | - | chr4_2:2164365-2164384 | Msa0583510:CDS | 40.0% | |
| GGCCACGAAAAAATTGTGAA+GGG | + | chr4_2:2164391-2164410 | None:intergenic | 40.0% | |
| GACAAATTAGTCCCTATGTC+AGG | - | chr4_2:2164469-2164488 | Msa0583510:intron | 40.0% | |
| CCCTATGTCAGGGAATAATT+TGG | - | chr4_2:2164480-2164499 | Msa0583510:intron | 40.0% | |
| CCCAAATTATTCCCTGACAT+AGG | + | chr4_2:2164484-2164503 | None:intergenic | 40.0% | |
| !!! | TCCCTCACATTTTTTTTCGC+GGG | + | chr4_2:2164530-2164549 | None:intergenic | 40.0% |
| !!! | GTCCCTCACATTTTTTTTCG+CGG | + | chr4_2:2164531-2164550 | None:intergenic | 40.0% |
| AAAAATGTGAGGGACTGAAG+TGG | - | chr4_2:2164536-2164555 | Msa0583510:intron | 40.0% | |
| AAAATGTGAGGGACTGAAGT+GGG | - | chr4_2:2164537-2164556 | Msa0583510:CDS | 40.0% | |
| GACGAGACAAAAATGAGATG+GGG | - | chr4_2:2164694-2164713 | Msa0583510:CDS | 40.0% | |
| ATTTGAGGGATCTCAATCGT+TGG | - | chr4_2:2164761-2164780 | Msa0583510:CDS | 40.0% | |
| ! | CATATCATTAAGGGCATGAC+AGG | - | chr4_2:2164935-2164954 | Msa0583510:CDS | 40.0% |
| ATGAGGAGGCTCAAATTTGA+GGG | - | chr4_2:2165137-2165156 | Msa0583510:CDS | 40.0% | |
| ! | CTCTTTTGCATGGTCTAATG+TGG | + | chr4_2:2165381-2165400 | None:intergenic | 40.0% |
| AACTTTGTTCACCCTTGATG+TGG | + | chr4_2:2165412-2165431 | None:intergenic | 40.0% | |
| AAGAGAAAAGAAAAGAGGGC+CGG | - | chr4_2:2165464-2165483 | Msa0583510:CDS | 40.0% | |
| ! | GATTCAATAGGTTGAGACTC+TGG | - | chr4_2:2165519-2165538 | Msa0583510:intron | 40.0% |
| !! | GAGACTCTGGAATTTACCAA+AGG | - | chr4_2:2165532-2165551 | Msa0583510:intron | 40.0% |
| AAACCCTTCTATACCCCATA+GGG | - | chr4_2:2165612-2165631 | Msa0583510:CDS | 40.0% | |
| AAGTTCCATAATGCCCTATG+GGG | + | chr4_2:2165628-2165647 | None:intergenic | 40.0% | |
| CAAGTTCCATAATGCCCTAT+GGG | + | chr4_2:2165629-2165648 | None:intergenic | 40.0% | |
| TCAAGTTCCATAATGCCCTA+TGG | + | chr4_2:2165630-2165649 | None:intergenic | 40.0% | |
| ! | ATAGGGCATTATGGAACTTG+AGG | - | chr4_2:2165629-2165648 | Msa0583510:CDS | 40.0% |
| ! | TAGGGCATTATGGAACTTGA+GGG | - | chr4_2:2165630-2165649 | Msa0583510:CDS | 40.0% |
| CTTCACCTATCCAAACTAGT+AGG | - | chr4_2:2165668-2165687 | Msa0583510:CDS | 40.0% | |
| ! | AGATCCCTACTAGTTTGGAT+AGG | + | chr4_2:2165676-2165695 | None:intergenic | 40.0% |
| TGATCAGATCCCTACTAGTT+TGG | + | chr4_2:2165681-2165700 | None:intergenic | 40.0% | |
| CAACTGACATAGGATAAAGG+AGG | + | chr4_2:2165924-2165943 | None:intergenic | 40.0% | |
| CTCCTTTATCCTATGTCAGT+TGG | - | chr4_2:2165922-2165941 | Msa0583510:intron | 40.0% | |
| ACAAAACAAGGGATTCTGGA+TGG | - | chr4_2:2166036-2166055 | Msa0583510:intron | 40.0% | |
| AAGGGATTCTGGATGGTAAA+AGG | - | chr4_2:2166043-2166062 | Msa0583510:intron | 40.0% | |
| TTCTGGATGGTAAAAGGATC+TGG | - | chr4_2:2166049-2166068 | Msa0583510:intron | 40.0% | |
| TCTGGATGGTAAAAGGATCT+GGG | - | chr4_2:2166050-2166069 | Msa0583510:intron | 40.0% | |
| !!! | CGTTTTGGTTCGATTTTGGA+AGG | + | chr4_2:2166109-2166128 | None:intergenic | 40.0% |
| !!! | AGGTCGTTTTGGTTCGATTT+TGG | + | chr4_2:2166113-2166132 | None:intergenic | 40.0% |
| AACCAAAACGACCTCATCAA+TGG | - | chr4_2:2166119-2166138 | Msa0583510:intron | 40.0% | |
| ! | AACCATTGATGAGGTCGTTT+TGG | + | chr4_2:2166124-2166143 | None:intergenic | 40.0% |
| ! | GATTATTTGGGTCTGAAACC+AGG | - | chr4_2:2166305-2166324 | Msa0583510:intron | 40.0% |
| ! | TATGGAGATGGTGCATCTTT+TGG | - | chr4_2:2166406-2166425 | Msa0583510:intron | 40.0% |
| GATCTACACCATGTCTATCA+TGG | - | chr4_2:2166568-2166587 | Msa0583510:intron | 40.0% | |
| TCTACACCATGTCTATCATG+GGG | - | chr4_2:2166570-2166589 | Msa0583510:intron | 40.0% | |
| AACAGCTCATGAGAAAGAGT+TGG | - | chr4_2:2166879-2166898 | Msa0583510:intron | 40.0% | |
| TGTAGTTGCAAGTTCTCCTT+TGG | - | chr4_2:2166918-2166937 | Msa0583510:intron | 40.0% | |
| !!! | GGCTTTTTTGTTGTCACCAA+AGG | + | chr4_2:2166937-2166956 | None:intergenic | 40.0% |
| !! | ACATTAGTAGGGAAGGTGTT+TGG | + | chr4_2:2167012-2167031 | None:intergenic | 40.0% |
| TCAAGCTCCTGACATTAGTA+GGG | + | chr4_2:2167023-2167042 | None:intergenic | 40.0% | |
| ATCAAGCTCCTGACATTAGT+AGG | + | chr4_2:2167024-2167043 | None:intergenic | 40.0% | |
| TGTTCCTGTGAAGTATGTCT+CGG | - | chr4_2:2167065-2167084 | Msa0583510:intron | 40.0% | |
| TTGGTCAGAGTGTATACCAA+TGG | + | chr4_2:2167254-2167273 | None:intergenic | 40.0% | |
| ! | TTCGAGTTTGAAAAGCATGC+TGG | - | chr4_2:2167357-2167376 | Msa0583510:intron | 40.0% |
| AAACAGACTAATGGCTGCAT+AGG | - | chr4_2:2167573-2167592 | Msa0583510:intron | 40.0% | |
| TAAGTTTGCGCAAAGATGGT+GGG | + | chr4_2:2167747-2167766 | None:intergenic | 40.0% | |
| TTAAGTTTGCGCAAAGATGG+TGG | + | chr4_2:2167748-2167767 | None:intergenic | 40.0% | |
| GCGCAAACTTAACTTAGGTT+AGG | - | chr4_2:2167756-2167775 | Msa0583510:intron | 40.0% | |
| ! | TGGTGCATTGTGTAACTTGT+TGG | - | chr4_2:2167850-2167869 | Msa0583510:intron | 40.0% |
| GGTTTCACTCAAAAGATTGG+AGG | - | chr4_2:2167871-2167890 | Msa0583510:intron | 40.0% | |
| AGCACCTAATCCCAATGATT+TGG | + | chr4_2:2167914-2167933 | None:intergenic | 40.0% | |
| TCTAGAAAGCTCATGTTCGT+GGG | - | chr4_2:2167962-2167981 | Msa0583510:five_prime_UTR | 40.0% | |
| TCATGTTCGTGGGTGATTAA+AGG | - | chr4_2:2167972-2167991 | Msa0583510:five_prime_UTR | 40.0% | |
| CGAAGGAAAGAGAGAGGAAT+AGG | + | chr4_2:2163744-2163763 | None:intergenic | 45.0% | |
| ! | CTAACCGGAGATTTTTACGG+CGG | + | chr4_2:2163777-2163796 | None:intergenic | 45.0% |
| GCCGTAAAAATCTCCGGTTA+GGG | - | chr4_2:2163776-2163795 | Msa0583510:three_prime_UTR | 45.0% | |
| TCTGTACCATCGGAGATGAT+CGG | + | chr4_2:2163804-2163823 | None:intergenic | 45.0% | |
| GGTTACACGATCTGTACCAT+CGG | + | chr4_2:2163814-2163833 | None:intergenic | 45.0% | |
| GCTAAATCCCTCTCGCAAAT+AGG | - | chr4_2:2164318-2164337 | Msa0583510:CDS | 45.0% | |
| GACTTTGACCTATTTGCGAG+AGG | + | chr4_2:2164329-2164348 | None:intergenic | 45.0% | |
| !!! | GGCCCTTCACAATTTTTTCG+TGG | - | chr4_2:2164386-2164405 | Msa0583510:CDS | 45.0% |
| GGGCCACGAAAAAATTGTGA+AGG | + | chr4_2:2164392-2164411 | None:intergenic | 45.0% | |
| GCCCGCGAAAAAAAATGTGA+GGG | - | chr4_2:2164526-2164545 | Msa0583510:intron | 45.0% | |
| ATTCTCAACACTGCCCCAAA+AGG | + | chr4_2:2164655-2164674 | None:intergenic | 45.0% | |
| ! | TTGGGGCAGTGTTGAGAATT+AGG | - | chr4_2:2164656-2164675 | Msa0583510:intron | 45.0% |
| GATGAGGAGGCTCAAATTTG+AGG | - | chr4_2:2165136-2165155 | Msa0583510:CDS | 45.0% | |
| !! | GGATGAAGTGCTCTTTTGCA+TGG | + | chr4_2:2165391-2165410 | None:intergenic | 45.0% |
| ! | AGAGCACTTCATCCACATCA+AGG | - | chr4_2:2165397-2165416 | Msa0583510:CDS | 45.0% |
| GAGCACTTCATCCACATCAA+GGG | - | chr4_2:2165398-2165417 | Msa0583510:CDS | 45.0% | |
| AGAGAAAAGAAAAGAGGGCC+GGG | - | chr4_2:2165465-2165484 | Msa0583510:CDS | 45.0% | |
| CTATGGGGTATAGAAGGGTT+TGG | + | chr4_2:2165613-2165632 | None:intergenic | 45.0% | |
| CAAACCCTTCTATACCCCAT+AGG | - | chr4_2:2165611-2165630 | Msa0583510:CDS | 45.0% | |
| ATGCCCTATGGGGTATAGAA+GGG | + | chr4_2:2165618-2165637 | None:intergenic | 45.0% | |
| AATGCCCTATGGGGTATAGA+AGG | + | chr4_2:2165619-2165638 | None:intergenic | 45.0% | |
| ! | CTATACCCCATAGGGCATTA+TGG | - | chr4_2:2165620-2165639 | Msa0583510:CDS | 45.0% |
| ACTTGAGGGAGCAATCATTG+AGG | - | chr4_2:2165644-2165663 | Msa0583510:CDS | 45.0% | |
| CTAGTAGGGATCTGATCACA+TGG | - | chr4_2:2165683-2165702 | Msa0583510:CDS | 45.0% | |
| GTGGTATAAGTTTCCCGACA+TGG | + | chr4_2:2165869-2165888 | None:intergenic | 45.0% | |
| TTCAGTGAAATTGACAGGCC+TGG | + | chr4_2:2166326-2166345 | None:intergenic | 45.0% | |
| CAACTTCCCCATGATAGACA+TGG | + | chr4_2:2166579-2166598 | None:intergenic | 45.0% | |
| AGACGAGATCTGGATCAACA+GGG | - | chr4_2:2166599-2166618 | Msa0583510:intron | 45.0% | |
| GACATTGCCATCCTTGTCAA+AGG | + | chr4_2:2166629-2166648 | None:intergenic | 45.0% | |
| ACACCTTCCCTACTAATGTC+AGG | - | chr4_2:2167013-2167032 | Msa0583510:intron | 45.0% | |
| GTCAGGAGCTTGATATCTAC+TGG | - | chr4_2:2167030-2167049 | Msa0583510:intron | 45.0% | |
| CGAAGTTCCTGCATCCATAA+AGG | + | chr4_2:2167164-2167183 | None:intergenic | 45.0% | |
| TTATGGATGCAGGAACTTCG+TGG | - | chr4_2:2167164-2167183 | Msa0583510:intron | 45.0% | |
| TGACTGACACCCACAAAGAT+AGG | + | chr4_2:2167207-2167226 | None:intergenic | 45.0% | |
| ! | CGTGAGCTTCAACGGATTTA+TGG | - | chr4_2:2167696-2167715 | Msa0583510:intron | 45.0% |
| AAGTTTGCGCAAAGATGGTG+GGG | + | chr4_2:2167746-2167765 | None:intergenic | 45.0% | |
| ! | CTCTAGAAAGCTCATGTTCG+TGG | - | chr4_2:2167961-2167980 | Msa0583510:five_prime_UTR | 45.0% |
| !! | TAATTTCGGGGCACTGAACT+CGG | - | chr4_2:2168007-2168026 | Msa0583510:five_prime_UTR | 45.0% |
| AGAGAGGAATAGGGTGTGTG+AGG | + | chr4_2:2163734-2163753 | None:intergenic | 50.0% | |
| GAAAGCCGAAGGAAAGAGAG+AGG | + | chr4_2:2163750-2163769 | None:intergenic | 50.0% | |
| CGCCGTAAAAATCTCCGGTT+AGG | - | chr4_2:2163775-2163794 | Msa0583510:three_prime_UTR | 50.0% | |
| GAGATGATCGGAACCCTAAC+CGG | + | chr4_2:2163792-2163811 | None:intergenic | 50.0% | |
| GGCCCGCGAAAAAAAATGTG+AGG | - | chr4_2:2164525-2164544 | Msa0583510:intron | 50.0% | |
| ! | GGGCAGTGTTGAGAATTAGG+CGG | - | chr4_2:2164659-2164678 | Msa0583510:intron | 50.0% |
| AGGGATCTCAATCGTTGGTG+AGG | - | chr4_2:2164766-2164785 | Msa0583510:CDS | 50.0% | |
| GAGAAAAGAAAAGAGGGCCG+GGG | - | chr4_2:2165466-2165485 | Msa0583510:CDS | 50.0% | |
| AGAACGTTACCTAGCATCCC+CGG | + | chr4_2:2165486-2165505 | None:intergenic | 50.0% | |
| TCCCGACATGGCAGAGTATA+GGG | + | chr4_2:2165857-2165876 | None:intergenic | 50.0% | |
| TTCCCGACATGGCAGAGTAT+AGG | + | chr4_2:2165858-2165877 | None:intergenic | 50.0% | |
| GCATGTTAGTGACAGAGAGC+CGG | - | chr4_2:2166072-2166091 | Msa0583510:intron | 50.0% | |
| AATACCTACGTTTCGGGCGA+TGG | - | chr4_2:2166349-2166368 | Msa0583510:intron | 50.0% | |
| ! | TCTGGAGCTTGCACATCACT+AGG | + | chr4_2:2166517-2166536 | None:intergenic | 50.0% |
| GAGACGAGATCTGGATCAAC+AGG | - | chr4_2:2166598-2166617 | Msa0583510:intron | 50.0% | |
| AACAGGGCAAGCCTTTGACA+AGG | - | chr4_2:2166615-2166634 | Msa0583510:intron | 50.0% | |
| !! | TTGCCATAAGGGGTGCCAAA+CGG | + | chr4_2:2166697-2166716 | None:intergenic | 50.0% |
| !! | TTGGTGGGTTCCCAGATGAA+CGG | - | chr4_2:2166782-2166801 | Msa0583510:intron | 50.0% |
| AGATAGCACCCCGTTCATCT+GGG | + | chr4_2:2166795-2166814 | None:intergenic | 50.0% | |
| GCTCCTGACATTAGTAGGGA+AGG | + | chr4_2:2167019-2167038 | None:intergenic | 50.0% | |
| TCCTGTGAAGTATGTCTCGG+TGG | - | chr4_2:2167068-2167087 | Msa0583510:intron | 50.0% | |
| CAGCAACACGTGAGCTTCAA+CGG | - | chr4_2:2167688-2167707 | Msa0583510:intron | 50.0% | |
| !! | CAAAGATGGTGGGGACTTAG+AGG | + | chr4_2:2167737-2167756 | None:intergenic | 50.0% |
| TCCGCCGCCGTAAAAATCTC+CGG | - | chr4_2:2163770-2163789 | Msa0583510:three_prime_UTR | 55.0% | |
| ! | ACCGGAGATTTTTACGGCGG+CGG | + | chr4_2:2163774-2163793 | None:intergenic | 55.0% |
| AGGGTTCCGATCATCTCCGA+TGG | - | chr4_2:2163795-2163814 | Msa0583510:three_prime_UTR | 55.0% | |
| TGGCAGAGTATAGGGGGGAA+GGG | + | chr4_2:2165849-2165868 | None:intergenic | 55.0% | |
| ATGGCAGAGTATAGGGGGGA+AGG | + | chr4_2:2165850-2165869 | None:intergenic | 55.0% | |
| CGACATGGCAGAGTATAGGG+GGG | + | chr4_2:2165854-2165873 | None:intergenic | 55.0% | |
| CCGACATGGCAGAGTATAGG+GGG | + | chr4_2:2165855-2165874 | None:intergenic | 55.0% | |
| CCCCCTATACTCTGCCATGT+CGG | - | chr4_2:2165852-2165871 | Msa0583510:intron | 55.0% | |
| CCCGACATGGCAGAGTATAG+GGG | + | chr4_2:2165856-2165875 | None:intergenic | 55.0% | |
| CCCCTATACTCTGCCATGTC+GGG | - | chr4_2:2165853-2165872 | Msa0583510:intron | 55.0% | |
| AGAACCATCGCCCGAAACGT+AGG | + | chr4_2:2166356-2166375 | None:intergenic | 55.0% | |
| GGGGAAGTTGAGACGAGATC+TGG | - | chr4_2:2166589-2166608 | Msa0583510:intron | 55.0% | |
| GGGCAAGCCTTTGACAAGGA+TGG | - | chr4_2:2166619-2166638 | Msa0583510:intron | 55.0% | |
| ATGGGACTTGCCTATGGCAG+TGG | - | chr4_2:2166655-2166674 | Msa0583510:intron | 55.0% | |
| TGGGACTTGCCTATGGCAGT+GGG | - | chr4_2:2166656-2166675 | Msa0583510:intron | 55.0% | |
| GATGCCCGTATCAGACCGTT+TGG | - | chr4_2:2166679-2166698 | Msa0583510:intron | 55.0% | |
| GGTGCCAAACGGTCTGATAC+GGG | + | chr4_2:2166686-2166705 | None:intergenic | 55.0% | |
| GGGTGCCAAACGGTCTGATA+CGG | + | chr4_2:2166687-2166706 | None:intergenic | 55.0% | |
| AGACCGTTTGGCACCCCTTA+TGG | - | chr4_2:2166691-2166710 | Msa0583510:intron | 55.0% | |
| !! | TGGTGGGTTCCCAGATGAAC+GGG | - | chr4_2:2166783-2166802 | Msa0583510:intron | 55.0% |
| GAGATAGCACCCCGTTCATC+TGG | + | chr4_2:2166796-2166815 | None:intergenic | 55.0% | |
| ! | TGAACGGGGTGCTATCTCTG+TGG | - | chr4_2:2166798-2166817 | Msa0583510:intron | 55.0% |
| ! | GAACGGGGTGCTATCTCTGT+GGG | - | chr4_2:2166799-2166818 | Msa0583510:intron | 55.0% |
| GCCACCGAGACATACTTCAC+AGG | + | chr4_2:2167072-2167091 | None:intergenic | 55.0% | |
| TGAAGTATGTCTCGGTGGCG+CGG | - | chr4_2:2167073-2167092 | Msa0583510:intron | 55.0% | |
| AAAAGAGGGCCGGGGATGCT+AGG | - | chr4_2:2165474-2165493 | Msa0583510:CDS | 60.0% | |
| GGGACTTGCCTATGGCAGTG+GGG | - | chr4_2:2166657-2166676 | Msa0583510:intron | 60.0% | |
| ! | GGTGGGTTCCCAGATGAACG+GGG | - | chr4_2:2166784-2166803 | Msa0583510:intron | 60.0% |
| ! | GGGTGCTATCTCTGTGGGCA+GGG | - | chr4_2:2166804-2166823 | Msa0583510:intron | 60.0% |
| GAAGTATGTCTCGGTGGCGC+GGG | - | chr4_2:2167074-2167093 | Msa0583510:intron | 60.0% | |
| ACGGGCATCCCCACTGCCAT+AGG | + | chr4_2:2166668-2166687 | None:intergenic | 65.0% | |
| ! | GGGGTGCTATCTCTGTGGGC+AGG | - | chr4_2:2166803-2166822 | Msa0583510:intron | 65.0% |
| GTGGCGCGGGAGGTAAGTGT+TGG | - | chr4_2:2167087-2167106 | Msa0583510:intron | 65.0% | |
| ACGGCGGCGGAGAAAGCCGA+AGG | + | chr4_2:2163761-2163780 | None:intergenic | 70.0% | |
| GTATGTCTCGGTGGCGCGGG+AGG | - | chr4_2:2167077-2167096 | Msa0583510:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 2163666 | 2168112 | 2163666 | ID=Msa0583510;Name=Msa0583510 |
| chr4_2 | mRNA | 2163666 | 2168112 | 2163666 | ID=Msa0583510-mRNA-1;Parent=Msa0583510;Name=Msa0583510-mRNA-1;_AED=0.09;_eAED=0.09;_QI=182|0.5|0.57|1|0.33|0.14|7|372|465 |
| chr4_2 | exon | 2163666 | 2164102 | 2163666 | ID=Msa0583510-mRNA-1:exon:591;Parent=Msa0583510-mRNA-1 |
| chr4_2 | exon | 2164235 | 2164433 | 2164235 | ID=Msa0583510-mRNA-1:exon:590;Parent=Msa0583510-mRNA-1 |
| chr4_2 | exon | 2164537 | 2164602 | 2164537 | ID=Msa0583510-mRNA-1:exon:589;Parent=Msa0583510-mRNA-1 |
| chr4_2 | exon | 2164680 | 2165270 | 2164680 | ID=Msa0583510-mRNA-1:exon:588;Parent=Msa0583510-mRNA-1 |
| chr4_2 | exon | 2165280 | 2165525 | 2165280 | ID=Msa0583510-mRNA-1:exon:587;Parent=Msa0583510-mRNA-1 |
| chr4_2 | exon | 2165547 | 2165747 | 2165547 | ID=Msa0583510-mRNA-1:exon:586;Parent=Msa0583510-mRNA-1 |
| chr4_2 | exon | 2167901 | 2168112 | 2167901 | ID=Msa0583510-mRNA-1:exon:585;Parent=Msa0583510-mRNA-1 |
| chr4_2 | five_prime_UTR | 2167931 | 2168112 | 2167931 | ID=Msa0583510-mRNA-1:five_prime_utr;Parent=Msa0583510-mRNA-1 |
| chr4_2 | CDS | 2167901 | 2167930 | 2167901 | ID=Msa0583510-mRNA-1:cds;Parent=Msa0583510-mRNA-1 |
| chr4_2 | CDS | 2165547 | 2165747 | 2165547 | ID=Msa0583510-mRNA-1:cds;Parent=Msa0583510-mRNA-1 |
| chr4_2 | CDS | 2165280 | 2165525 | 2165280 | ID=Msa0583510-mRNA-1:cds;Parent=Msa0583510-mRNA-1 |
| chr4_2 | CDS | 2164680 | 2165270 | 2164680 | ID=Msa0583510-mRNA-1:cds;Parent=Msa0583510-mRNA-1 |
| chr4_2 | CDS | 2164537 | 2164602 | 2164537 | ID=Msa0583510-mRNA-1:cds;Parent=Msa0583510-mRNA-1 |
| chr4_2 | CDS | 2164235 | 2164433 | 2164235 | ID=Msa0583510-mRNA-1:cds;Parent=Msa0583510-mRNA-1 |
| chr4_2 | CDS | 2164038 | 2164102 | 2164038 | ID=Msa0583510-mRNA-1:cds;Parent=Msa0583510-mRNA-1 |
| chr4_2 | three_prime_UTR | 2163666 | 2164037 | 2163666 | ID=Msa0583510-mRNA-1:three_prime_utr;Parent=Msa0583510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
