AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0817270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0817270 MtrunA17_Chr5g0436041 89.589 365 0 1 1 365 1 327 0.0 652
Msa0817270 MtrunA17_Chr7g0240341 63.305 357 86 4 7 360 1 315 1.10e-154 437
Msa0817270 MtrunA17_Chr7g0240341 28.571 203 121 6 33 227 133 319 2.22e-13 70.1
Msa0817270 MtrunA17_Chr5g0396801 34.819 359 168 8 22 359 25 338 1.98e-56 187
Msa0817270 MtrunA17_Chr8g0347451 31.868 364 186 7 16 359 32 353 2.36e-54 182
Msa0817270 MtrunA17_Chr8g0347451 28.511 235 127 8 14 221 132 352 1.10e-15 77.4
Msa0817270 MtrunA17_Chr6g0488081 29.619 341 174 6 33 359 18 306 1.68e-41 147
Msa0817270 MtrunA17_Chr6g0488081 28.070 228 139 7 16 229 97 313 9.36e-17 80.1
Msa0817270 MtrunA17_Chr3g0135861 29.096 354 172 8 31 360 32 330 8.01e-41 146
Msa0817270 MtrunA17_Chr4g0067231 29.006 362 187 10 22 355 2 321 2.91e-39 142
Msa0817270 MtrunA17_Chr4g0067231 25.728 206 130 5 35 225 130 327 6.45e-13 68.9
Msa0817270 MtrunA17_Chr7g0242311 31.230 317 160 8 45 360 98 357 1.40e-38 141
Msa0817270 MtrunA17_Chr7g0242311 28.571 196 115 7 27 219 180 353 1.77e-12 68.2
Msa0817270 MtrunA17_Chr3g0131501 29.607 331 173 10 34 359 205 480 3.14e-37 140
Msa0817270 MtrunA17_Chr3g0131501 32.663 199 115 5 27 219 292 477 7.78e-20 90.5
Msa0817270 MtrunA17_Chr3g0131501 26.449 276 138 8 92 356 157 378 3.98e-17 82.4
Msa0817270 MtrunA17_Chr2g0296061 28.451 355 186 10 36 364 17 329 1.90e-36 134
Msa0817270 MtrunA17_Chr2g0296061 28.641 206 124 5 35 225 129 326 9.45e-17 80.5
Msa0817270 MtrunA17_Chr7g0252401 29.762 336 163 10 34 359 207 479 9.76e-36 135
Msa0817270 MtrunA17_Chr7g0252401 32.323 198 114 5 27 220 296 477 8.48e-23 99.4
Msa0817270 MtrunA17_Chr4g0006851 30.915 317 161 9 45 360 100 359 2.67e-35 132
Msa0817270 MtrunA17_Chr4g0006851 27.143 210 128 7 26 232 181 368 8.05e-14 72.0
Msa0817270 MtrunA17_Chr3g0137941 29.261 352 186 10 12 361 105 395 8.20e-35 132
Msa0817270 MtrunA17_Chr3g0137941 29.224 219 137 6 15 229 196 400 9.43e-22 95.5
Msa0817270 MtrunA17_Chr1g0149111 29.429 333 175 10 30 359 135 410 4.28e-34 130
Msa0817270 MtrunA17_Chr1g0149111 28.708 209 131 6 15 219 213 407 6.09e-19 87.8
Msa0817270 MtrunA17_Chr8g0385571 28.701 331 176 8 34 359 227 502 5.85e-34 131
Msa0817270 MtrunA17_Chr8g0385571 33.166 199 114 6 27 219 314 499 4.21e-21 94.4
Msa0817270 MtrunA17_Chr4g0063561 27.327 333 186 6 30 361 119 396 1.49e-32 125
Msa0817270 MtrunA17_Chr4g0063561 29.302 215 131 7 19 226 198 398 3.14e-19 88.2
Msa0817270 MtrunA17_Chr3g0115801 28.529 333 196 8 29 359 111 403 2.33e-31 122
Msa0817270 MtrunA17_Chr3g0135801 28.743 334 185 11 33 358 33 321 1.67e-28 113
Msa0817270 MtrunA17_Chr8g0382201 27.246 334 201 8 28 359 189 482 1.09e-26 110
Msa0817270 MtrunA17_Chr7g0269701 27.052 329 189 10 36 359 24 306 2.15e-22 96.3
Msa0817270 MtrunA17_Chr7g0269701 31.351 185 116 6 48 229 137 313 2.03e-15 76.3
Msa0817270 MtrunA17_Chr7g0269701 30.736 231 114 8 138 361 17 208 4.32e-15 75.5
Msa0817270 MtrunA17_Chr5g0423111 30.655 336 182 12 29 359 16 305 1.05e-21 94.7
Msa0817270 MtrunA17_Chr4g0000261 22.222 342 202 7 31 359 63 353 6.54e-21 92.8
Msa0817270 MtrunA17_Chr6g0488341 24.286 280 156 5 81 359 7 231 4.64e-19 85.5
Msa0817270 MtrunA17_Chr8g0393031 22.291 323 197 8 33 347 17 293 5.24e-19 86.7
Msa0817270 MtrunA17_Chr1g0195101 26.398 322 188 9 46 363 31 307 8.55e-19 85.9
Msa0817270 MtrunA17_Chr1g0195101 30.481 187 115 5 48 229 134 310 1.67e-16 79.3
Msa0817270 MtrunA17_Chr3g0088301 23.563 348 203 9 24 359 83 379 1.31e-18 86.3
Msa0817270 MtrunA17_Chr4g0040341 24.642 349 203 11 23 359 61 361 1.40e-17 83.2
Msa0817270 MtrunA17_Chr8g0352031 23.209 349 204 9 24 359 58 355 1.59e-17 82.8
Msa0817270 MtrunA17_Chr8g0386871 28.000 200 126 3 25 222 404 587 4.32e-17 82.8
Msa0817270 MtrunA17_Chr2g0328891 24.138 348 206 9 23 359 52 352 9.29e-17 80.9
Msa0817270 MtrunA17_Chr1g0201361 29.592 196 120 4 25 219 123 301 3.23e-16 78.6
Msa0817270 MtrunA17_Chr4g0004571 28.365 208 137 4 21 227 101 297 3.54e-16 78.2
Msa0817270 MtrunA17_Chr8g0383321 28.713 202 128 4 25 226 124 309 6.00e-16 77.8
Msa0817270 MtrunA17_Chr2g0331771 30.968 155 101 2 49 202 264 413 1.34e-15 77.8
Msa0817270 MtrunA17_Chr1g0196921 20.588 340 202 6 30 356 10 294 1.74e-14 73.2
Msa0817270 MtrunA17_Chr5g0431531 33.537 164 100 3 75 233 167 326 2.32e-14 73.2
Msa0817270 MtrunA17_Chr4g0028531 32.338 201 120 7 27 218 106 299 3.63e-13 69.7
Msa0817270 MtrunA17_Chr6g0463351 24.062 320 178 7 47 359 80 341 5.16e-13 69.7
Msa0817270 MtrunA17_Chr1g0196161 30.435 184 110 5 40 219 3 172 6.07e-13 66.6
Msa0817270 MtrunA17_Chr6g0463041 27.273 176 113 5 58 229 83 247 3.16e-12 65.9
Msa0817270 MtrunA17_Chr8g0372531 26.923 208 133 7 33 228 112 312 1.11e-11 65.1
Msa0817270 MtrunA17_Chr3g0133111 22.222 216 153 3 14 221 101 309 1.79e-11 64.3
Msa0817270 MtrunA17_Chr8g0366791 27.189 217 145 5 10 220 86 295 4.96e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0817270 AT3G55640.1 63.315 368 91 3 1 364 3 330 1.83e-162 458
Msa0817270 AT3G55640.4 63.315 368 91 3 1 364 3 330 1.83e-162 458
Msa0817270 AT3G53940.1 57.250 400 92 3 4 362 2 363 8.61e-157 445
Msa0817270 AT2G37890.1 57.373 373 110 2 1 362 1 335 9.58e-149 423
Msa0817270 AT3G55640.2 68.651 252 73 2 1 248 3 252 1.63e-121 351
Msa0817270 AT3G55640.3 68.651 252 73 2 1 248 3 252 1.63e-121 351
Msa0817270 AT3G53940.2 58.392 286 78 2 4 248 2 287 6.25e-113 331
Msa0817270 AT4G01100.1 33.623 345 168 7 34 359 42 344 2.21e-54 182
Msa0817270 AT4G01100.2 32.591 359 167 8 34 359 42 358 1.66e-51 176
Msa0817270 AT4G01100.3 32.440 336 166 7 43 359 1 294 4.59e-50 170
Msa0817270 AT5G51050.1 32.432 333 158 10 34 359 223 495 7.47e-40 147
Msa0817270 AT5G51050.1 31.959 194 121 3 27 220 311 493 3.16e-20 92.4
Msa0817270 AT4G26180.1 28.736 348 171 8 32 359 19 309 1.11e-37 138
Msa0817270 AT4G26180.1 30.144 209 124 5 24 219 107 306 6.77e-17 81.3
Msa0817270 AT4G32400.1 31.437 334 171 8 30 361 110 387 2.58e-36 136
Msa0817270 AT4G32400.1 31.163 215 128 6 20 228 191 391 2.72e-21 94.7
Msa0817270 AT5G48970.1 29.683 347 173 11 36 353 24 328 5.16e-35 131
Msa0817270 AT5G48970.1 25.581 215 128 5 34 227 135 338 2.92e-13 70.5
Msa0817270 AT5G61810.2 28.701 331 170 8 34 360 65 333 7.90e-35 130
Msa0817270 AT5G61810.2 30.052 193 123 4 27 219 149 329 3.12e-19 87.8
Msa0817270 AT3G51870.1 28.391 317 169 6 45 360 102 361 9.04e-35 132
Msa0817270 AT3G51870.1 27.570 214 124 8 26 230 183 374 2.20e-13 71.2
Msa0817270 AT3G21390.2 28.696 345 178 8 36 353 43 346 1.14e-34 130
Msa0817270 AT3G21390.1 28.696 345 178 8 36 353 21 324 1.23e-34 130
Msa0817270 AT5G61810.1 28.701 331 170 8 34 360 208 476 6.37e-34 131
Msa0817270 AT5G61810.1 30.052 193 123 4 27 219 292 472 6.78e-19 88.2
Msa0817270 AT1G14560.1 28.571 336 166 9 42 356 35 317 1.64e-33 127
Msa0817270 AT1G14560.1 29.646 226 131 7 16 223 105 320 8.26e-21 92.4
Msa0817270 AT4G26180.2 27.879 330 161 8 32 341 19 291 3.82e-32 122
Msa0817270 AT4G26180.2 29.381 194 115 5 24 204 107 291 5.44e-12 66.2
Msa0817270 AT5G64970.1 28.829 333 197 8 28 359 129 422 4.28e-31 122
Msa0817270 AT5G64970.2 28.528 326 193 8 35 359 12 298 2.39e-30 118
Msa0817270 AT5G48970.2 29.801 302 150 8 82 363 8 267 6.17e-30 116
Msa0817270 AT5G48970.2 25.581 215 128 5 34 227 64 267 3.14e-13 69.7
Msa0817270 AT5G01500.1 36.994 173 97 3 45 216 130 291 2.40e-28 114
Msa0817270 AT5G07320.1 29.268 328 160 11 40 360 215 477 2.48e-28 115
Msa0817270 AT5G07320.1 32.821 195 117 5 27 220 293 474 2.97e-19 89.4
Msa0817270 AT1G14560.2 27.673 318 156 9 45 341 38 302 5.43e-28 112
Msa0817270 AT1G14560.2 27.536 207 123 6 16 204 105 302 2.48e-13 70.5
Msa0817270 AT5G56450.1 28.090 356 194 13 20 359 16 325 1.83e-27 110
Msa0817270 AT1G78180.1 28.571 350 205 8 10 359 111 415 7.93e-27 110
Msa0817270 AT5G64970.3 28.254 315 186 8 28 341 129 404 1.54e-25 106
Msa0817270 AT1G14560.3 29.699 266 118 8 112 356 2 219 8.61e-24 98.6
Msa0817270 AT1G14560.3 29.646 226 131 7 16 223 7 222 1.75e-21 92.4
Msa0817270 AT4G11440.1 25.680 331 184 7 35 360 331 604 1.19e-20 94.0
Msa0817270 AT4G11440.1 28.283 198 130 3 25 220 414 601 4.40e-15 77.0
Msa0817270 AT4G11440.2 25.680 331 184 7 35 360 331 604 1.19e-20 94.0
Msa0817270 AT4G11440.2 28.283 198 130 3 25 220 414 601 4.40e-15 77.0
Msa0817270 AT1G25380.1 27.673 318 182 8 42 355 29 302 1.55e-19 89.4
Msa0817270 AT1G25380.1 28.497 193 121 6 47 229 134 319 2.02e-17 83.2
Msa0817270 AT1G25380.1 31.132 212 99 8 157 362 37 207 7.93e-12 66.2
Msa0817270 AT1G25380.2 27.673 318 182 8 42 355 29 302 1.55e-19 89.4
Msa0817270 AT1G25380.2 28.497 193 121 6 47 229 134 319 2.02e-17 83.2
Msa0817270 AT1G25380.2 31.132 212 99 8 157 362 37 207 7.93e-12 66.2
Msa0817270 AT1G07030.1 24.012 329 201 7 34 362 40 319 1.76e-19 88.6
Msa0817270 AT1G07030.1 34.756 164 94 4 75 231 168 325 4.39e-16 78.6
Msa0817270 AT3G08580.2 24.702 336 197 10 33 359 83 371 3.14e-19 88.6
Msa0817270 AT3G08580.1 24.702 336 197 10 33 359 83 371 3.14e-19 88.6
Msa0817270 AT3G20240.1 22.029 345 205 8 33 364 51 344 8.35e-19 87.0
Msa0817270 AT4G28390.1 23.864 352 209 11 19 359 66 369 1.01e-17 84.0
Msa0817270 AT4G28390.2 23.864 352 209 11 19 359 66 369 1.01e-17 84.0
Msa0817270 AT1G34065.2 29.469 207 127 5 25 230 147 335 1.46e-17 83.2
Msa0817270 AT1G34065.1 29.469 207 127 5 25 230 154 342 1.76e-17 83.2
Msa0817270 AT5G13490.1 23.235 340 197 9 33 359 87 375 4.58e-17 82.0
Msa0817270 AT5G13490.2 23.235 340 197 9 33 359 87 375 4.58e-17 82.0
Msa0817270 AT1G79900.1 30.256 195 119 5 37 229 112 291 1.13e-16 80.1
Msa0817270 AT5G66380.1 26.786 336 197 11 36 364 12 305 6.66e-16 77.8
Msa0817270 AT5G66380.1 29.268 205 123 9 26 218 102 296 1.93e-12 67.8
Msa0817270 AT4G39460.2 29.808 208 122 5 25 228 130 317 9.10e-16 77.8
Msa0817270 AT4G39460.1 29.808 208 122 5 25 228 130 317 9.10e-16 77.8
Msa0817270 AT4G39460.3 29.808 208 122 5 25 228 130 317 9.10e-16 77.8
Msa0817270 AT2G47490.1 28.947 190 123 7 48 233 131 312 9.28e-15 74.7
Msa0817270 AT2G47490.1 24.781 343 202 9 24 359 7 300 4.42e-14 72.8
Msa0817270 AT5G17400.1 23.242 327 191 9 32 347 12 289 2.11e-14 73.6
Msa0817270 AT4G03115.5 26.425 193 121 4 33 221 62 237 7.93e-14 70.9
Msa0817270 AT4G03115.6 26.425 193 121 4 33 221 70 245 8.44e-14 70.9
Msa0817270 AT4G03115.1 26.425 193 121 4 33 221 133 308 8.83e-14 71.6
Msa0817270 AT4G03115.3 26.425 193 121 4 33 221 165 340 1.40e-13 71.6
Msa0817270 AT5G46800.2 30.348 201 124 5 30 220 103 297 3.33e-13 70.1
Msa0817270 AT5G46800.3 30.348 201 124 5 30 220 103 297 3.33e-13 70.1
Msa0817270 AT5G46800.1 30.348 201 124 5 30 220 103 297 3.33e-13 70.1
Msa0817270 AT2G30160.1 33.987 153 95 3 75 222 170 321 3.55e-13 70.1
Msa0817270 AT5G09470.1 25.926 189 133 2 31 219 148 329 1.62e-12 68.2
Msa0817270 AT1G14140.1 25.926 189 132 3 32 219 116 297 3.67e-12 67.0
Msa0817270 AT1G14140.1 21.569 357 206 9 16 358 3 299 7.92e-12 65.9
Msa0817270 AT2G33820.2 25.424 177 131 1 41 216 43 219 3.89e-11 62.8
Msa0817270 AT3G54110.1 24.868 189 133 2 33 221 117 296 6.43e-11 63.2

Find 147 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGCTTGTGGCAGTCTTTC+AGG 0.123605 5_3:+52270781 Msa0817270:CDS
TTCTGATGTGTGGTGGAATT+TGG 0.155049 5_3:-52268344 None:intergenic
TAATATTAGGCTGTTACTTA+TGG 0.183522 5_3:+52272711 Msa0817270:three_prime_UTR
TGCCTCAAGAGGAGTGTTTA+AGG 0.215352 5_3:-52268426 None:intergenic
CTTGAACAACATTTAATATT+AGG 0.219324 5_3:+52272698 Msa0817270:three_prime_UTR
GAAGAAGATAGGGGTAAAAT+TGG 0.225505 5_3:+52268616 Msa0817270:five_prime_UTR
AAGGACTCTGGATTTGTTAT+AGG 0.228760 5_3:+52273025 Msa0817270:three_prime_UTR
TAATCCATGAAGAGGGGTTT+AGG 0.243240 5_3:+52269826 Msa0817270:CDS
TCTGATGTGTGGTGGAATTT+GGG 0.266119 5_3:-52268343 None:intergenic
GAGAAGCTGATTGCTATATT+TGG 0.270991 5_3:-52270582 None:intergenic
ATAGGGGTAAAATTGGAATT+TGG 0.273103 5_3:+52268623 Msa0817270:five_prime_UTR
GGGATTACTCGGCCTTTATA+AGG 0.273893 5_3:+52270447 Msa0817270:CDS
ATATTGATATTGATAATATA+TGG 0.279903 5_3:-52271700 None:intergenic
AAAATAGAGAAGAAGAAGAT+AGG 0.303818 5_3:+52268605 Msa0817270:five_prime_UTR
TCTGACAAAATTCTTCAAAT+AGG 0.306711 5_3:+52273098 Msa0817270:three_prime_UTR
CTTTGAGGAAAGCGAGTATA+TGG 0.320572 5_3:+52269787 Msa0817270:CDS
AATATTAGGCTGTTACTTAT+GGG 0.322912 5_3:+52272712 Msa0817270:three_prime_UTR
ATGAAAGCTTGCGATCGTTT+TGG 0.327150 5_3:+52270610 Msa0817270:CDS
AATCCATGAAGAGGGGTTTA+GGG 0.337988 5_3:+52269827 Msa0817270:CDS
TTTACTTACTATAGAGGTAT+TGG 0.338091 5_3:+52270394 Msa0817270:CDS
TTCAACTGTTGTTGTTAGTC+TGG 0.353204 5_3:+52270762 Msa0817270:CDS
ATTCTAATGTTGCAACTTTG+AGG 0.359407 5_3:+52269772 Msa0817270:CDS
AAGCCCTAAACCCCTCTTCA+TGG 0.361238 5_3:-52269830 None:intergenic
TGTGGTGGAATTTGGGGTTA+AGG 0.361792 5_3:-52268336 None:intergenic
AAATAGAGAAGAAGAAGATA+GGG 0.362728 5_3:+52268606 Msa0817270:five_prime_UTR
GGCACAACCTTATAGTATTC+AGG 0.364759 5_3:-52272424 None:intergenic
GTGGTGGAATTTGGGGTTAA+GGG 0.367067 5_3:-52268335 None:intergenic
TTTGTTGGTGGTGGGTTGGC+AGG 0.370802 5_3:+52270089 Msa0817270:CDS
AGGACTCTGGATTTGTTATA+GGG 0.385533 5_3:+52273026 Msa0817270:three_prime_UTR
AATAACAGAAAGTGGTGTTA+AGG 0.391872 5_3:+52268581 Msa0817270:five_prime_UTR
AATCGATAAATATAACTTAA+CGG 0.395467 5_3:-52272594 None:intergenic
CGATCGCAAGCTTTCATATA+CGG 0.396542 5_3:-52270604 None:intergenic
TTTCCTAGATTCTCATGGTT+GGG 0.404016 5_3:+52272627 Msa0817270:three_prime_UTR
TATCATTGCTATAGGAAGAA+TGG 0.405778 5_3:-52272896 None:intergenic
CTCGGCCTTTATAAGGGACT+TGG 0.408288 5_3:+52270454 Msa0817270:CDS
TCAGGCATTGCATCATCAAC+AGG 0.416081 5_3:+52270799 Msa0817270:CDS
GCCTCAAGAGGAGTGTTTAA+GGG 0.417164 5_3:-52268425 None:intergenic
ATGGTGCACAACACTGCAAC+GGG 0.419445 5_3:-52272853 None:intergenic
AAGTTACTTATTCATGCAAA+AGG 0.422848 5_3:+52272564 Msa0817270:three_prime_UTR
AAGAACGCGGCTTGCTGCAC+AGG 0.423096 5_3:+52270151 Msa0817270:CDS
CTTCTCGCCGGAGGAGTTGC+CGG 0.423493 5_3:+52268747 Msa0817270:CDS
ACAAACAATTGTCAAGGAAG+AGG 0.426240 5_3:+52270426 Msa0817270:CDS
TTGTAAAATCTGTCTCCTTA+AGG 0.427445 5_3:-52272809 None:intergenic
GGATTACTCGGCCTTTATAA+GGG 0.437307 5_3:+52270448 Msa0817270:CDS
AACTGCAACTCAGTGCCTTA+AGG 0.438783 5_3:+52272794 Msa0817270:three_prime_UTR
ATAACAGAAAGTGGTGTTAA+GGG 0.438835 5_3:+52268582 Msa0817270:five_prime_UTR
TAGTTCCAAGTCCCTTATAA+AGG 0.439391 5_3:-52270459 None:intergenic
ATGATTACACCCATCAACTT+TGG 0.439933 5_3:+52272513 Msa0817270:exon
ATTTCCTAGATTCTCATGGT+TGG 0.444299 5_3:+52272626 Msa0817270:three_prime_UTR
TGACAATTTCATTTATCCAT+TGG 0.446257 5_3:-52271634 None:intergenic
AAAACGGTAGCGTATTAAGA+AGG 0.449560 5_3:-52268452 None:intergenic
TAACGGTGGACGGTGGTGTT+CGG 0.453198 5_3:+52268673 Msa0817270:CDS
GCACAACACTGCAACGGGAC+TGG 0.455922 5_3:-52272848 None:intergenic
CAACCACCGCCGCAACAGAT+TGG 0.456851 5_3:+52268711 Msa0817270:CDS
GTTCCAATCTGTTGCGGCGG+TGG 0.457668 5_3:-52268714 None:intergenic
TAAAAGTTAACAGAAGAGTA+AGG 0.459944 5_3:-52269891 None:intergenic
TCAATTTCAATAACAGAAAG+TGG 0.465691 5_3:+52268573 Msa0817270:five_prime_UTR
GAATTTATCACTTTCACTAC+GGG 0.467120 5_3:-52272996 None:intergenic
TGCTACATCTACTTATCCCT+TGG 0.467252 5_3:+52270121 Msa0817270:CDS
ATCATTGCTATAGGAAGAAT+GGG 0.467323 5_3:-52272895 None:intergenic
GTACATTCAAGCATATATTC+CGG 0.468396 5_3:+52272365 Msa0817270:CDS
TTCAAGAATAATCCATGAAG+AGG 0.469893 5_3:+52269818 Msa0817270:CDS
TGGAGATGCAAACGGAAGCT+AGG 0.470661 5_3:+52268643 Msa0817270:exon
TGGTGCTAATGCAGACTGTT+GGG 0.472674 5_3:+52270559 Msa0817270:intron
CATGTAACTATCATTGCTAT+AGG 0.473503 5_3:-52272904 None:intergenic
ATATGCAGCAACGTTTCCAT+TGG 0.474353 5_3:+52272270 Msa0817270:intron
AAATTCATTATCAAGGACTC+TGG 0.476399 5_3:+52273013 Msa0817270:three_prime_UTR
TTGCCCAACCATGAGAATCT+AGG 0.477342 5_3:-52272630 None:intergenic
CAGGTAAAATTCCTCTGTAA+AGG 0.481174 5_3:-52272405 None:intergenic
ATTATCAATATCAATATCAA+TGG 0.483478 5_3:+52271706 Msa0817270:CDS
GTGTACAATACAGGTCTCTT+TGG 0.487805 5_3:+52272343 Msa0817270:CDS
CTGGTGCTAATGCAGACTGT+TGG 0.488868 5_3:+52270558 Msa0817270:intron
TTGGAATTTGGAGATGCAAA+CGG 0.491470 5_3:+52268635 Msa0817270:exon
CAAAGCTCCGGCAACTCCTC+CGG 0.494245 5_3:-52268754 None:intergenic
TGGTGGAATTTGGGGTTAAG+GGG 0.494385 5_3:-52268334 None:intergenic
CAAACAATTGTCAAGGAAGA+GGG 0.494902 5_3:+52270427 Msa0817270:CDS
CGAGCGCGTGTGTACAATAC+AGG 0.494967 5_3:+52272334 Msa0817270:CDS
AACCATCTTCAGTGTCTCAT+AGG 0.501803 5_3:-52272470 None:intergenic
GACCTATGAGACACTGAAGA+TGG 0.501950 5_3:+52272468 Msa0817270:CDS
TCTCTATTACTTTGCAGTTG+CGG 0.504953 5_3:-52270038 None:intergenic
TGAATTTATCACTTTCACTA+CGG 0.509175 5_3:-52272997 None:intergenic
AGATCAGACTCCAAAGTTGA+TGG 0.510404 5_3:-52272523 None:intergenic
CGACGTCGCTTAATAGCAAA+AGG 0.510987 5_3:+52268496 Msa0817270:five_prime_UTR
TGTTGTTCAAGTGTCTGTAC+AGG 0.520385 5_3:-52272686 None:intergenic
TTCTTATGAGCATTACAAGA+AGG 0.522188 5_3:+52269914 Msa0817270:CDS
AAGTGATAAATTCATTATCA+AGG 0.526499 5_3:+52273006 Msa0817270:three_prime_UTR
AGTTACTTATTCATGCAAAA+GGG 0.528314 5_3:+52272565 Msa0817270:three_prime_UTR
TATAAGGTTGTGCCTGGTGT+AGG 0.529307 5_3:+52272433 Msa0817270:CDS
CTGATGTGTGGTGGAATTTG+GGG 0.530755 5_3:-52268342 None:intergenic
TAACAGAAGAGTAAGGTAAA+CGG 0.531609 5_3:-52269884 None:intergenic
GGAAGCTAGGGTTGGTGTAA+CGG 0.532148 5_3:+52268656 Msa0817270:CDS
CTCCGTCTAACAAGATCCAA+TGG 0.539106 5_3:-52272286 None:intergenic
TCTCATTTCCTAGATTCTCA+TGG 0.539490 5_3:+52272622 Msa0817270:three_prime_UTR
TCAAGAATAATCCATGAAGA+GGG 0.543154 5_3:+52269819 Msa0817270:CDS
TCCCTTAAACACTCCTCTTG+AGG 0.543408 5_3:+52268424 Msa0817270:five_prime_UTR
ATAAATGAAATTGTCAACAT+AGG 0.544961 5_3:+52271641 Msa0817270:CDS
ATCTAATGCGGTTGGTTGCA+AGG 0.545109 5_3:-52268383 None:intergenic
ACGATTCGGTTTGTTCAAAA+CGG 0.549474 5_3:-52268468 None:intergenic
AGGGTTGGTGTAACGGTGGA+CGG 0.554866 5_3:+52268663 Msa0817270:CDS
GGAGATGCAAACGGAAGCTA+GGG 0.555939 5_3:+52268644 Msa0817270:exon
AACAACAACAGTTGAATCAT+CGG 0.558241 5_3:-52270755 None:intergenic
AAACGGTAGCGTATTAAGAA+GGG 0.559225 5_3:-52268451 None:intergenic
GTCAAGGAAGAGGGATTACT+CGG 0.560113 5_3:+52270436 Msa0817270:CDS
ACTATTTCTCAGCTTCTCGC+CGG 0.561608 5_3:+52268735 Msa0817270:CDS
AAGCATATATTCCGGTCAGA+AGG 0.563525 5_3:+52272373 Msa0817270:CDS
TTCCATTGGATCTTGTTAGA+CGG 0.564464 5_3:+52272284 Msa0817270:CDS
TAAGAAGGGTTTGCCTCAAG+AGG 0.564466 5_3:-52268437 None:intergenic
GTTTAAGGGATTAAAAGTGT+TGG 0.567117 5_3:-52268411 None:intergenic
CAACGTTGTAGTGCTACTGT+GGG 0.571966 5_3:+52272650 Msa0817270:three_prime_UTR
GGGACTTGGAACTACCCTCT+TGG 0.572235 5_3:+52270468 Msa0817270:CDS
AGTTGATGGGTGTAATCATA+CGG 0.572720 5_3:-52272509 None:intergenic
CCGCGTTCTTACAAGATCCA+AGG 0.576326 5_3:-52270138 None:intergenic
TGCTTTACAAACAATTGTCA+AGG 0.578320 5_3:+52270420 Msa0817270:CDS
AGACGGAGGAAGCAACTTGA+GGG 0.579075 5_3:+52272301 Msa0817270:CDS
AATAGAGAAGAAGAAGATAG+GGG 0.579487 5_3:+52268607 Msa0817270:five_prime_UTR
GATCAGACTCCAAAGTTGAT+GGG 0.580419 5_3:-52272522 None:intergenic
CGCGTTCTTACAAGATCCAA+GGG 0.583255 5_3:-52270137 None:intergenic
GGCCACGCAAACCTTCTGAC+CGG 0.592865 5_3:-52272384 None:intergenic
TAGACGGAGGAAGCAACTTG+AGG 0.593462 5_3:+52272300 Msa0817270:CDS
CATGGTGCACAACACTGCAA+CGG 0.595976 5_3:-52272854 None:intergenic
TCACTTCTCAAAAGATTACA+TGG 0.596401 5_3:-52272872 None:intergenic
TCAATATCAATATCAATGGA+TGG 0.598855 5_3:+52271710 Msa0817270:CDS
GCAACGTTGTAGTGCTACTG+TGG 0.600874 5_3:+52272649 Msa0817270:three_prime_UTR
ATTTCTCAGCTTCTCGCCGG+AGG 0.601058 5_3:+52268738 Msa0817270:CDS
GAATACTATAAGGTTGTGCC+TGG 0.602847 5_3:+52272427 Msa0817270:CDS
ATGCAAACGGAAGCTAGGGT+TGG 0.605982 5_3:+52268648 Msa0817270:CDS
AATGAAATTACTATATAGCA+AGG 0.608367 5_3:+52272767 Msa0817270:three_prime_UTR
CCTTGGATCTTGTAAGAACG+CGG 0.611552 5_3:+52270138 Msa0817270:CDS
TGGTAGTGATCTAATGCGGT+TGG 0.614102 5_3:-52268391 None:intergenic
TTGCTCATGATAAAAGCCAA+TGG 0.614171 5_3:+52271618 Msa0817270:CDS
TTCCGGTCAGAAGGTTTGCG+TGG 0.617988 5_3:+52272382 Msa0817270:CDS
TACGGGCCAAATGAAAACAA+TGG 0.624377 5_3:-52272979 None:intergenic
CATTGGATCTTGTTAGACGG+AGG 0.625988 5_3:+52272287 Msa0817270:CDS
GAAATAGTTCCAATCTGTTG+CGG 0.634856 5_3:-52268720 None:intergenic
GGTTTGCGTGGCCTTTACAG+AGG 0.639547 5_3:+52272394 Msa0817270:CDS
CAAGAATAATCCATGAAGAG+GGG 0.640978 5_3:+52269820 Msa0817270:CDS
GTTGTTGTTAGTCTGGCTTG+TGG 0.646435 5_3:+52270769 Msa0817270:CDS
AGCTAGGGTTGGTGTAACGG+TGG 0.654947 5_3:+52268659 Msa0817270:CDS
ACGGAGGAAGCAACTTGAGG+GGG 0.659118 5_3:+52272303 Msa0817270:CDS
GTTGGTGTAACGGTGGACGG+TGG 0.659448 5_3:+52268666 Msa0817270:CDS
GACGGAGGAAGCAACTTGAG+GGG 0.659793 5_3:+52272302 Msa0817270:CDS
ATAGTTCCAATCTGTTGCGG+CGG 0.660860 5_3:-52268717 None:intergenic
ATAAAACAAATGCCTACACC+AGG 0.667613 5_3:-52272445 None:intergenic
AGGATTGTGAGTCTAGCAAG+TGG 0.683649 5_3:-52268795 None:intergenic
ATAATAACATCATACCAAGA+GGG 0.684442 5_3:-52270482 None:intergenic
AACGTTGTAGTGCTACTGTG+GGG 0.690126 5_3:+52272651 Msa0817270:three_prime_UTR
GTGTTGGTAGTGATCTAATG+CGG 0.786066 5_3:-52268395 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTCATTTTGTTAT+TGG + chr5_3:52268871-52268890 Msa0817270:intron 10.0%
!!! TTTTTATTCATTTTGTTATT+GGG + chr5_3:52268872-52268891 Msa0817270:intron 10.0%
!!! ATATTGATATTGATAATATA+TGG - chr5_3:52271703-52271722 None:intergenic 10.0%
!! TCAAAAAAAAAAAAAATGAA+AGG + chr5_3:52272742-52272761 Msa0817270:three_prime_UTR 10.0%
!!! TTAGTAATTTTGTTGTATTT+TGG + chr5_3:52268897-52268916 Msa0817270:intron 15.0%
!!! TTTTGAATTGAGATAATTTT+GGG + chr5_3:52268991-52269010 Msa0817270:intron 15.0%
!! TTATGAAAATAAGGTAAAAA+TGG + chr5_3:52269221-52269240 Msa0817270:intron 15.0%
!!! ATAATAATTCTAGAAAACTA+AGG - chr5_3:52269708-52269727 None:intergenic 15.0%
!!! TTCTTCAATTTTTATTTAAC+TGG - chr5_3:52271055-52271074 None:intergenic 15.0%
!! ATTATCAATATCAATATCAA+TGG + chr5_3:52271706-52271725 Msa0817270:CDS 15.0%
!! AATCGATAAATATAACTTAA+CGG - chr5_3:52272597-52272616 None:intergenic 15.0%
!! TAAAAATGTTGTCAATTTAT+AGG + chr5_3:52273066-52273085 Msa0817270:three_prime_UTR 15.0%
!! AAAAATGTTGTCAATTTATA+GGG + chr5_3:52273067-52273086 Msa0817270:three_prime_UTR 15.0%
!!! ATAAATTTTTCACCTGAAAA+AGG - chr5_3:52268818-52268837 None:intergenic 20.0%
!! ACTGTATGAGTTAATTAATT+TGG + chr5_3:52268968-52268987 Msa0817270:intron 20.0%
!!! GTTTTGAATTGAGATAATTT+TGG + chr5_3:52268990-52269009 Msa0817270:intron 20.0%
!!! TTTGAATTGAGATAATTTTG+GGG + chr5_3:52268992-52269011 Msa0817270:intron 20.0%
!! ATAAGTTGTTTATCCAAATA+GGG + chr5_3:52269470-52269489 Msa0817270:intron 20.0%
!!! TTATAATTTTTGCAGATTCA+AGG + chr5_3:52269744-52269763 Msa0817270:intron 20.0%
!!! TATAATTTTTGCAGATTCAA+GGG + chr5_3:52269745-52269764 Msa0817270:intron 20.0%
!! TTTCCAAAATTGAAATTAAG+AGG - chr5_3:52270242-52270261 None:intergenic 20.0%
!! TATGAATATACATGAATTAG+AGG - chr5_3:52270694-52270713 None:intergenic 20.0%
!! AAATTATCAGGAATATGTAT+AGG - chr5_3:52270916-52270935 None:intergenic 20.0%
!! AAATTCAATAGTTTGACTAA+AGG - chr5_3:52271079-52271098 None:intergenic 20.0%
!! TAATAAATTTCCTGAAAAAC+AGG - chr5_3:52271280-52271299 None:intergenic 20.0%
!! CATGTCATAAAATAAAACTT+GGG - chr5_3:52271335-52271354 None:intergenic 20.0%
!! ACATGTCATAAAATAAAACT+TGG - chr5_3:52271336-52271355 None:intergenic 20.0%
!! ATAAATGAAATTGTCAACAT+AGG + chr5_3:52271641-52271660 Msa0817270:CDS 20.0%
!!! AACATAATTTGTTATTGAAG+TGG - chr5_3:52272070-52272089 None:intergenic 20.0%
!! TTCAAATATGATTAGATTTC+TGG + chr5_3:52272109-52272128 Msa0817270:intron 20.0%
!!! TATAACATTACTTGATTTGA+TGG + chr5_3:52272162-52272181 Msa0817270:intron 20.0%
!!! AATTTTACCTGAATACTATA+AGG + chr5_3:52272417-52272436 Msa0817270:CDS 20.0%
!! CTTGAACAACATTTAATATT+AGG + chr5_3:52272698-52272717 Msa0817270:three_prime_UTR 20.0%
!! AATGAAATTACTATATAGCA+AGG + chr5_3:52272767-52272786 Msa0817270:three_prime_UTR 20.0%
!! ACAAAAATAAAGAAAAGCAA+AGG - chr5_3:52272934-52272953 None:intergenic 20.0%
!! AAGTGATAAATTCATTATCA+AGG + chr5_3:52273006-52273025 Msa0817270:three_prime_UTR 20.0%
! TCAATTTCAATAACAGAAAG+TGG + chr5_3:52268573-52268592 Msa0817270:five_prime_UTR 25.0%
! AAAATAGAGAAGAAGAAGAT+AGG + chr5_3:52268605-52268624 Msa0817270:five_prime_UTR 25.0%
! AAATAGAGAAGAAGAAGATA+GGG + chr5_3:52268606-52268625 Msa0817270:five_prime_UTR 25.0%
! TTAGCGAGTTTATGAAAATA+AGG + chr5_3:52269212-52269231 Msa0817270:intron 25.0%
! AATAAGGTAAAAATGGTATG+TGG + chr5_3:52269228-52269247 Msa0817270:intron 25.0%
! ATAAGGTAAAAATGGTATGT+GGG + chr5_3:52269229-52269248 Msa0817270:intron 25.0%
! GATAAGTTGTTTATCCAAAT+AGG + chr5_3:52269469-52269488 Msa0817270:intron 25.0%
!! TATAATTTTTGTCACTGTGT+TGG + chr5_3:52269610-52269629 Msa0817270:intron 25.0%
! TAAAAGTTAACAGAAGAGTA+AGG - chr5_3:52269894-52269913 None:intergenic 25.0%
! TTACAAGAAGGTAAGAATAT+TGG + chr5_3:52269926-52269945 Msa0817270:intron 25.0%
!! GATCTTTGTATACATTTTGT+TGG + chr5_3:52270074-52270093 Msa0817270:CDS 25.0%
!! CATCCTCTTAATTTCAATTT+TGG + chr5_3:52270236-52270255 Msa0817270:intron 25.0%
!! ACGAATTTTACTTACTATAG+AGG + chr5_3:52270388-52270407 Msa0817270:CDS 25.0%
!! TTTACTTACTATAGAGGTAT+TGG + chr5_3:52270394-52270413 Msa0817270:CDS 25.0%
! ATAATAACATCATACCAAGA+GGG - chr5_3:52270485-52270504 None:intergenic 25.0%
! ACATCAAAAGGTAAATTATC+AGG - chr5_3:52270928-52270947 None:intergenic 25.0%
!! TTTTGATGTTTCTTGCAATT+GGG + chr5_3:52270939-52270958 Msa0817270:intron 25.0%
! AAAGAAGTTAATATCTGTAG+TGG + chr5_3:52271117-52271136 Msa0817270:intron 25.0%
!! TGCCATTTGAAAATTTAGTA+AGG + chr5_3:52271231-52271250 Msa0817270:intron 25.0%
! GCCATTTGAAAATTTAGTAA+GGG + chr5_3:52271232-52271251 Msa0817270:intron 25.0%
!! TCCCTTACTAAATTTTCAAA+TGG - chr5_3:52271236-52271255 None:intergenic 25.0%
!! AATCACAATTTTCTTCGTTT+AGG - chr5_3:52271582-52271601 None:intergenic 25.0%
! TGACAATTTCATTTATCCAT+TGG - chr5_3:52271637-52271656 None:intergenic 25.0%
!! ATATGGTTTTCTTTCTTTGA+AGG - chr5_3:52271686-52271705 None:intergenic 25.0%
! TCAATATCAATATCAATGGA+TGG + chr5_3:52271710-52271729 Msa0817270:CDS 25.0%
! AAAACATACTATTGCTGTAT+TGG - chr5_3:52271796-52271815 None:intergenic 25.0%
!!! TATGATTAGATTTCTGGTTT+TGG + chr5_3:52272115-52272134 Msa0817270:intron 25.0%
! AAGTTACTTATTCATGCAAA+AGG + chr5_3:52272564-52272583 Msa0817270:three_prime_UTR 25.0%
! AGTTACTTATTCATGCAAAA+GGG + chr5_3:52272565-52272584 Msa0817270:three_prime_UTR 25.0%
!! TAATATTAGGCTGTTACTTA+TGG + chr5_3:52272711-52272730 Msa0817270:three_prime_UTR 25.0%
!! AATATTAGGCTGTTACTTAT+GGG + chr5_3:52272712-52272731 Msa0817270:three_prime_UTR 25.0%
! TGAATTTATCACTTTCACTA+CGG - chr5_3:52273000-52273019 None:intergenic 25.0%
! TCTGACAAAATTCTTCAAAT+AGG + chr5_3:52273098-52273117 Msa0817270:three_prime_UTR 25.0%
! GTTTAAGGGATTAAAAGTGT+TGG - chr5_3:52268414-52268433 None:intergenic 30.0%
! AATAACAGAAAGTGGTGTTA+AGG + chr5_3:52268581-52268600 Msa0817270:five_prime_UTR 30.0%
! ATAACAGAAAGTGGTGTTAA+GGG + chr5_3:52268582-52268601 Msa0817270:five_prime_UTR 30.0%
AATAGAGAAGAAGAAGATAG+GGG + chr5_3:52268607-52268626 Msa0817270:five_prime_UTR 30.0%
ATAGGGGTAAAATTGGAATT+TGG + chr5_3:52268623-52268642 Msa0817270:five_prime_UTR 30.0%
TCATAACTCATAAGCTGTTT+GGG + chr5_3:52269256-52269275 Msa0817270:intron 30.0%
ACTGTTATCATTAGCTATCT+TGG - chr5_3:52269347-52269366 None:intergenic 30.0%
! CTCTCGAATTTCGATAATTT+TGG + chr5_3:52269567-52269586 Msa0817270:intron 30.0%
ATTCTAATGTTGCAACTTTG+AGG + chr5_3:52269772-52269791 Msa0817270:CDS 30.0%
TTCAAGAATAATCCATGAAG+AGG + chr5_3:52269818-52269837 Msa0817270:CDS 30.0%
TCAAGAATAATCCATGAAGA+GGG + chr5_3:52269819-52269838 Msa0817270:CDS 30.0%
TAACAGAAGAGTAAGGTAAA+CGG - chr5_3:52269887-52269906 None:intergenic 30.0%
TTCTTATGAGCATTACAAGA+AGG + chr5_3:52269914-52269933 Msa0817270:CDS 30.0%
! TTGATATGCACTTTTGTTCT+CGG + chr5_3:52269962-52269981 Msa0817270:intron 30.0%
! CTTTGTATACATTTTGTTGG+TGG + chr5_3:52270077-52270096 Msa0817270:CDS 30.0%
TGCTTTACAAACAATTGTCA+AGG + chr5_3:52270420-52270439 Msa0817270:CDS 30.0%
GATAATAACATCATACCAAG+AGG - chr5_3:52270486-52270505 None:intergenic 30.0%
! GGAATATATGCTTTGAGTAA+TGG - chr5_3:52270515-52270534 None:intergenic 30.0%
AAGCATATATTCCTTTCTTG+TGG + chr5_3:52270522-52270541 Msa0817270:intron 30.0%
ATGAATTAGAGGAAAATCAG+TGG - chr5_3:52270683-52270702 None:intergenic 30.0%
AACAACAACAGTTGAATCAT+CGG - chr5_3:52270758-52270777 None:intergenic 30.0%
! TCAACAGGTTAGTTATCAAA+AGG + chr5_3:52270814-52270833 Msa0817270:intron 30.0%
! TCTTGATTGTTGAACTTTTG+AGG + chr5_3:52270882-52270901 Msa0817270:intron 30.0%
CAATTGCAAGAAACATCAAA+AGG - chr5_3:52270940-52270959 None:intergenic 30.0%
! CTTTTGATGTTTCTTGCAAT+TGG + chr5_3:52270938-52270957 Msa0817270:intron 30.0%
TTTGATGTTTCTTGCAATTG+GGG + chr5_3:52270940-52270959 Msa0817270:intron 30.0%
! TTGGGGTTTGTATATTCTTT+TGG + chr5_3:52270957-52270976 Msa0817270:intron 30.0%
ATAAAATAACAACTCCATCC+CGG - chr5_3:52271210-52271229 None:intergenic 30.0%
ATATCAATATCAATGGATGG+TGG + chr5_3:52271713-52271732 Msa0817270:intron 30.0%
TTCTATTGACACTAACTACT+TGG + chr5_3:52271753-52271772 Msa0817270:intron 30.0%
!!! TTTTGGAATTAGTTCTCACT+GGG + chr5_3:52272132-52272151 Msa0817270:intron 30.0%
ATGGTGCATTTCACATAAAA+AGG + chr5_3:52272181-52272200 Msa0817270:intron 30.0%
TGGTGCATTTCACATAAAAA+GGG + chr5_3:52272182-52272201 Msa0817270:intron 30.0%
ATTTCACATAAAAAGGGATC+AGG + chr5_3:52272188-52272207 Msa0817270:intron 30.0%
GTACATTCAAGCATATATTC+CGG + chr5_3:52272365-52272384 Msa0817270:CDS 30.0%
TTGTAAAATCTGTCTCCTTA+AGG - chr5_3:52272812-52272831 None:intergenic 30.0%
! GATTTTACAAGTGCATTTGA+AGG + chr5_3:52272822-52272841 Msa0817270:three_prime_UTR 30.0%
TCACTTCTCAAAAGATTACA+TGG - chr5_3:52272875-52272894 None:intergenic 30.0%
ATCATTGCTATAGGAAGAAT+GGG - chr5_3:52272898-52272917 None:intergenic 30.0%
TATCATTGCTATAGGAAGAA+TGG - chr5_3:52272899-52272918 None:intergenic 30.0%
CATGTAACTATCATTGCTAT+AGG - chr5_3:52272907-52272926 None:intergenic 30.0%
! TGTAGTCCATTGTTTTCATT+TGG + chr5_3:52272973-52272992 Msa0817270:three_prime_UTR 30.0%
GAATTTATCACTTTCACTAC+GGG - chr5_3:52272999-52273018 None:intergenic 30.0%
AAATTCATTATCAAGGACTC+TGG + chr5_3:52273013-52273032 Msa0817270:three_prime_UTR 30.0%
! TGTGTTTCTTTTCTGATGTG+TGG - chr5_3:52268357-52268376 None:intergenic 35.0%
AAACGGTAGCGTATTAAGAA+GGG - chr5_3:52268454-52268473 None:intergenic 35.0%
AAAACGGTAGCGTATTAAGA+AGG - chr5_3:52268455-52268474 None:intergenic 35.0%
!! ACGATTCGGTTTGTTCAAAA+CGG - chr5_3:52268471-52268490 None:intergenic 35.0%
GAAGAAGATAGGGGTAAAAT+TGG + chr5_3:52268616-52268635 Msa0817270:five_prime_UTR 35.0%
TTGGAATTTGGAGATGCAAA+CGG + chr5_3:52268635-52268654 Msa0817270:exon 35.0%
GAAATAGTTCCAATCTGTTG+CGG - chr5_3:52268723-52268742 None:intergenic 35.0%
! ACAAGTTTTACTCAAAGCTC+CGG - chr5_3:52268769-52268788 None:intergenic 35.0%
! TAGACTCACAATCCTTTTTC+AGG + chr5_3:52268803-52268822 Msa0817270:CDS 35.0%
!! GATAATTTTGGGGACTGAAT+TGG + chr5_3:52269002-52269021 Msa0817270:intron 35.0%
!! GGTTGTTGCTTATGATTTTG+TGG + chr5_3:52269023-52269042 Msa0817270:intron 35.0%
GTCATAACTCATAAGCTGTT+TGG + chr5_3:52269255-52269274 Msa0817270:intron 35.0%
TGTAAGACTATGACCCTATT+TGG - chr5_3:52269486-52269505 None:intergenic 35.0%
AGTCAATCAAAACATGCACT+AGG + chr5_3:52269537-52269556 Msa0817270:intron 35.0%
! TCAAAACATGCACTAGGTTT+TGG + chr5_3:52269543-52269562 Msa0817270:intron 35.0%
AACAATGATTGAGAGAGAGA+TGG + chr5_3:52269646-52269665 Msa0817270:intron 35.0%
CAAGAATAATCCATGAAGAG+GGG + chr5_3:52269820-52269839 Msa0817270:CDS 35.0%
! TTTTATACGTGCAGTTTCTG+AGG + chr5_3:52270009-52270028 Msa0817270:intron 35.0%
TCTCTATTACTTTGCAGTTG+CGG - chr5_3:52270041-52270060 None:intergenic 35.0%
!! TGTATACATTTTGTTGGTGG+TGG + chr5_3:52270080-52270099 Msa0817270:CDS 35.0%
!!! GTATACATTTTGTTGGTGGT+GGG + chr5_3:52270081-52270100 Msa0817270:CDS 35.0%
!! TTTTGGAAACTTGCAAGACT+TGG + chr5_3:52270253-52270272 Msa0817270:intron 35.0%
ACAAACAATTGTCAAGGAAG+AGG + chr5_3:52270426-52270445 Msa0817270:CDS 35.0%
CAAACAATTGTCAAGGAAGA+GGG + chr5_3:52270427-52270446 Msa0817270:CDS 35.0%
TAGTTCCAAGTCCCTTATAA+AGG - chr5_3:52270462-52270481 None:intergenic 35.0%
GAGAAGCTGATTGCTATATT+TGG - chr5_3:52270585-52270604 None:intergenic 35.0%
! TTCAACTGTTGTTGTTAGTC+TGG + chr5_3:52270762-52270781 Msa0817270:CDS 35.0%
! TTACCTTTTTCCTACATCTC+TGG + chr5_3:52270983-52271002 Msa0817270:intron 35.0%
!! TCACACTTTTCCTGTTTTTC+AGG + chr5_3:52271267-52271286 Msa0817270:intron 35.0%
CAAGAAATGACCTTATGTGA+CGG - chr5_3:52271382-52271401 None:intergenic 35.0%
ATGAACCTATATCATTCCCT+CGG + chr5_3:52271403-52271422 Msa0817270:intron 35.0%
! TACTTGTTCACATGTTTCTG+AGG + chr5_3:52271516-52271535 Msa0817270:intron 35.0%
TTGCTCATGATAAAAGCCAA+TGG + chr5_3:52271618-52271637 Msa0817270:CDS 35.0%
GTTGTCAAATGGACAAGATA+TGG - chr5_3:52271935-52271954 None:intergenic 35.0%
GTCCATTTGACAACAAATTG+CGG + chr5_3:52271941-52271960 Msa0817270:intron 35.0%
CACTGGACAATTACATTTAC+AGG - chr5_3:52272017-52272036 None:intergenic 35.0%
TAAATGTAATTGTCCAGTGC+AGG + chr5_3:52272018-52272037 Msa0817270:intron 35.0%
!!! GTTTTGGAATTAGTTCTCAC+TGG + chr5_3:52272131-52272150 Msa0817270:intron 35.0%
! TTTGGAATTAGTTCTCACTG+GGG + chr5_3:52272133-52272152 Msa0817270:intron 35.0%
TAACAGATGAATTCAACCGT+AGG - chr5_3:52272243-52272262 None:intergenic 35.0%
TTCCATTGGATCTTGTTAGA+CGG + chr5_3:52272284-52272303 Msa0817270:CDS 35.0%
CAGGTAAAATTCCTCTGTAA+AGG - chr5_3:52272408-52272427 None:intergenic 35.0%
ATAAAACAAATGCCTACACC+AGG - chr5_3:52272448-52272467 None:intergenic 35.0%
!! AGTTGATGGGTGTAATCATA+CGG - chr5_3:52272512-52272531 None:intergenic 35.0%
ATGATTACACCCATCAACTT+TGG + chr5_3:52272513-52272532 Msa0817270:exon 35.0%
TCTCATTTCCTAGATTCTCA+TGG + chr5_3:52272622-52272641 Msa0817270:three_prime_UTR 35.0%
ATTTCCTAGATTCTCATGGT+TGG + chr5_3:52272626-52272645 Msa0817270:three_prime_UTR 35.0%
TTTCCTAGATTCTCATGGTT+GGG + chr5_3:52272627-52272646 Msa0817270:three_prime_UTR 35.0%
!! AAGGACTCTGGATTTGTTAT+AGG + chr5_3:52273025-52273044 Msa0817270:three_prime_UTR 35.0%
!! AGGACTCTGGATTTGTTATA+GGG + chr5_3:52273026-52273045 Msa0817270:three_prime_UTR 35.0%
! TCTGATGTGTGGTGGAATTT+GGG - chr5_3:52268346-52268365 None:intergenic 40.0%
! TTCTGATGTGTGGTGGAATT+TGG - chr5_3:52268347-52268366 None:intergenic 40.0%
! GTTTCTTTTCTGATGTGTGG+TGG - chr5_3:52268354-52268373 None:intergenic 40.0%
!! GTGTTGGTAGTGATCTAATG+CGG - chr5_3:52268398-52268417 None:intergenic 40.0%
AATGATTGAGAGAGAGATGG+TGG + chr5_3:52269649-52269668 Msa0817270:intron 40.0%
ATGATTGAGAGAGAGATGGT+GGG + chr5_3:52269650-52269669 Msa0817270:intron 40.0%
! CTTTGAGGAAAGCGAGTATA+TGG + chr5_3:52269787-52269806 Msa0817270:CDS 40.0%
TAATCCATGAAGAGGGGTTT+AGG + chr5_3:52269826-52269845 Msa0817270:CDS 40.0%
AATCCATGAAGAGGGGTTTA+GGG + chr5_3:52269827-52269846 Msa0817270:CDS 40.0%
!! GGTTTAGGGCTTTTTGGAAA+GGG + chr5_3:52269841-52269860 Msa0817270:CDS 40.0%
TGCTACATCTACTTATCCCT+TGG + chr5_3:52270121-52270140 Msa0817270:CDS 40.0%
GGATTACTCGGCCTTTATAA+GGG + chr5_3:52270448-52270467 Msa0817270:CDS 40.0%
CGATCGCAAGCTTTCATATA+CGG - chr5_3:52270607-52270626 None:intergenic 40.0%
! ATGAAAGCTTGCGATCGTTT+TGG + chr5_3:52270610-52270629 Msa0817270:CDS 40.0%
!! GATCGTTTTGGATGTCAAAC+AGG + chr5_3:52270622-52270641 Msa0817270:CDS 40.0%
AACAGTTGAATCATCGGATC+TGG - chr5_3:52270752-52270771 None:intergenic 40.0%
ATGCCAGAGATGTAGGAAAA+AGG - chr5_3:52270989-52271008 None:intergenic 40.0%
CGTCACATAAGGTCATTTCT+TGG + chr5_3:52271380-52271399 Msa0817270:intron 40.0%
ACATACAGTTGTTGTAGCAG+TGG - chr5_3:52271823-52271842 None:intergenic 40.0%
GCTACAACAACTGTATGTTC+AGG + chr5_3:52271825-52271844 Msa0817270:intron 40.0%
!! CTCCGCAATTTGTTGTCAAA+TGG - chr5_3:52271946-52271965 None:intergenic 40.0%
TAAGAAAGACAGCACTACAC+AGG - chr5_3:52271987-52272006 None:intergenic 40.0%
TGTGTAGTGCTGTCTTTCTT+AGG + chr5_3:52271986-52272005 Msa0817270:intron 40.0%
CTTGTAGACTAGAATGCCTA+CGG + chr5_3:52272224-52272243 Msa0817270:intron 40.0%
ATATGCAGCAACGTTTCCAT+TGG + chr5_3:52272270-52272289 Msa0817270:intron 40.0%
GTGTACAATACAGGTCTCTT+TGG + chr5_3:52272343-52272362 Msa0817270:CDS 40.0%
AAGCATATATTCCGGTCAGA+AGG + chr5_3:52272373-52272392 Msa0817270:CDS 40.0%
GGCACAACCTTATAGTATTC+AGG - chr5_3:52272427-52272446 None:intergenic 40.0%
GAATACTATAAGGTTGTGCC+TGG + chr5_3:52272427-52272446 Msa0817270:CDS 40.0%
AACCATCTTCAGTGTCTCAT+AGG - chr5_3:52272473-52272492 None:intergenic 40.0%
!!! GACACTGAAGATGGTTTTAG+CGG + chr5_3:52272477-52272496 Msa0817270:CDS 40.0%
! GATCAGACTCCAAAGTTGAT+GGG - chr5_3:52272525-52272544 None:intergenic 40.0%
AGATCAGACTCCAAAGTTGA+TGG - chr5_3:52272526-52272545 None:intergenic 40.0%
TGTTGTTCAAGTGTCTGTAC+AGG - chr5_3:52272689-52272708 None:intergenic 40.0%
TACGGGCCAAATGAAAACAA+TGG - chr5_3:52272982-52273001 None:intergenic 40.0%
! TGTGGTGGAATTTGGGGTTA+AGG - chr5_3:52268339-52268358 None:intergenic 45.0%
! CTGATGTGTGGTGGAATTTG+GGG - chr5_3:52268345-52268364 None:intergenic 45.0%
! ATCTAATGCGGTTGGTTGCA+AGG - chr5_3:52268386-52268405 None:intergenic 45.0%
! TGGTAGTGATCTAATGCGGT+TGG - chr5_3:52268394-52268413 None:intergenic 45.0%
TCCCTTAAACACTCCTCTTG+AGG + chr5_3:52268424-52268443 Msa0817270:five_prime_UTR 45.0%
!! GCCTCAAGAGGAGTGTTTAA+GGG - chr5_3:52268428-52268447 None:intergenic 45.0%
!! TGCCTCAAGAGGAGTGTTTA+AGG - chr5_3:52268429-52268448 None:intergenic 45.0%
TAAGAAGGGTTTGCCTCAAG+AGG - chr5_3:52268440-52268459 None:intergenic 45.0%
!!! GCGACGTCGTTTTTACGATT+CGG - chr5_3:52268485-52268504 None:intergenic 45.0%
CGACGTCGCTTAATAGCAAA+AGG + chr5_3:52268496-52268515 Msa0817270:five_prime_UTR 45.0%
ATAGTTCCAATCTGTTGCGG+CGG - chr5_3:52268720-52268739 None:intergenic 45.0%
! ACTATTTCTCAGCTTCTCGC+CGG + chr5_3:52268735-52268754 Msa0817270:CDS 45.0%
AGGATTGTGAGTCTAGCAAG+TGG - chr5_3:52268798-52268817 None:intergenic 45.0%
TGATTGAGAGAGAGATGGTG+GGG + chr5_3:52269651-52269670 Msa0817270:intron 45.0%
!! AAGAGGGGTTTAGGGCTTTT+TGG + chr5_3:52269835-52269854 Msa0817270:CDS 45.0%
!! GGGTTTAGGGCTTTTTGGAA+AGG + chr5_3:52269840-52269859 Msa0817270:CDS 45.0%
!!! ACATTTTGTTGGTGGTGGGT+TGG + chr5_3:52270085-52270104 Msa0817270:CDS 45.0%
CGCGTTCTTACAAGATCCAA+GGG - chr5_3:52270140-52270159 None:intergenic 45.0%
CCTTGGATCTTGTAAGAACG+CGG + chr5_3:52270138-52270157 Msa0817270:CDS 45.0%
GTCAAGGAAGAGGGATTACT+CGG + chr5_3:52270436-52270455 Msa0817270:CDS 45.0%
GGGATTACTCGGCCTTTATA+AGG + chr5_3:52270447-52270466 Msa0817270:CDS 45.0%
AGTGGCTAAGTCCACAAGAA+AGG - chr5_3:52270536-52270555 None:intergenic 45.0%
TTGTGGACTTAGCCACTTAC+TGG + chr5_3:52270539-52270558 Msa0817270:intron 45.0%
TCTGCATTAGCACCAGTAAG+TGG - chr5_3:52270554-52270573 None:intergenic 45.0%
! TGGTGCTAATGCAGACTGTT+GGG + chr5_3:52270559-52270578 Msa0817270:intron 45.0%
! GTTGTTGTTAGTCTGGCTTG+TGG + chr5_3:52270769-52270788 Msa0817270:CDS 45.0%
! TCAGGCATTGCATCATCAAC+AGG + chr5_3:52270799-52270818 Msa0817270:CDS 45.0%
ACACTTGATGCCAGAGATGT+AGG - chr5_3:52270996-52271015 None:intergenic 45.0%
GGAATCAGCTGCATAACTTG+GGG - chr5_3:52271361-52271380 None:intergenic 45.0%
CGGAATCAGCTGCATAACTT+GGG - chr5_3:52271362-52271381 None:intergenic 45.0%
ACGGAATCAGCTGCATAACT+TGG - chr5_3:52271363-52271382 None:intergenic 45.0%
GGTAACCGAGGGAATGATAT+AGG - chr5_3:52271411-52271430 None:intergenic 45.0%
! CTCTCACATTTGGTAACCGA+GGG - chr5_3:52271422-52271441 None:intergenic 45.0%
AAGAGGACACCTCTCACATT+TGG - chr5_3:52271432-52271451 None:intergenic 45.0%
! GTGAGAAGCATACCTCAAAG+AGG - chr5_3:52271449-52271468 None:intergenic 45.0%
TTGAGGTATGCTTCTCACCT+AGG + chr5_3:52271451-52271470 Msa0817270:intron 45.0%
ACATCAGGTGAAGGTAACCT+AGG - chr5_3:52271471-52271490 None:intergenic 45.0%
GGTTACCTTCACCTGATGTT+TGG + chr5_3:52271472-52271491 Msa0817270:intron 45.0%
ACCTTCACCTGATGTTTGGA+CGG + chr5_3:52271476-52271495 Msa0817270:intron 45.0%
CTGATATCCGTCCAAACATC+AGG - chr5_3:52271486-52271505 None:intergenic 45.0%
CAACAACTGTATGTTCAGGC+AGG + chr5_3:52271829-52271848 Msa0817270:intron 45.0%
CTCCGTCTAACAAGATCCAA+TGG - chr5_3:52272289-52272308 None:intergenic 45.0%
CATTGGATCTTGTTAGACGG+AGG + chr5_3:52272287-52272306 Msa0817270:CDS 45.0%
TATAAGGTTGTGCCTGGTGT+AGG + chr5_3:52272433-52272452 Msa0817270:CDS 45.0%
GACCTATGAGACACTGAAGA+TGG + chr5_3:52272468-52272487 Msa0817270:CDS 45.0%
TTGCCCAACCATGAGAATCT+AGG - chr5_3:52272633-52272652 None:intergenic 45.0%
! CAACGTTGTAGTGCTACTGT+GGG + chr5_3:52272650-52272669 Msa0817270:three_prime_UTR 45.0%
! AACGTTGTAGTGCTACTGTG+GGG + chr5_3:52272651-52272670 Msa0817270:three_prime_UTR 45.0%
AACTGCAACTCAGTGCCTTA+AGG + chr5_3:52272794-52272813 Msa0817270:three_prime_UTR 45.0%
TGGAGATGCAAACGGAAGCT+AGG + chr5_3:52268643-52268662 Msa0817270:exon 50.0%
GGAGATGCAAACGGAAGCTA+GGG + chr5_3:52268644-52268663 Msa0817270:exon 50.0%
ATGCAAACGGAAGCTAGGGT+TGG + chr5_3:52268648-52268667 Msa0817270:CDS 50.0%
!! GGAAGCTAGGGTTGGTGTAA+CGG + chr5_3:52268656-52268675 Msa0817270:CDS 50.0%
! GATTGAGAGAGAGATGGTGG+GGG + chr5_3:52269652-52269671 Msa0817270:intron 50.0%
! GGTGGGGGTACAGGTTATTT+AGG + chr5_3:52269667-52269686 Msa0817270:intron 50.0%
AAGCCCTAAACCCCTCTTCA+TGG - chr5_3:52269833-52269852 None:intergenic 50.0%
CCGCGTTCTTACAAGATCCA+AGG - chr5_3:52270141-52270160 None:intergenic 50.0%
CTCGGCCTTTATAAGGGACT+TGG + chr5_3:52270454-52270473 Msa0817270:CDS 50.0%
! CTGGTGCTAATGCAGACTGT+TGG + chr5_3:52270558-52270577 Msa0817270:intron 50.0%
! GCAGCTGATTCCGTCACATA+AGG + chr5_3:52271369-52271388 Msa0817270:intron 50.0%
! CCTCTCACATTTGGTAACCG+AGG - chr5_3:52271423-52271442 None:intergenic 50.0%
CCTCGGTTACCAAATGTGAG+AGG + chr5_3:52271420-52271439 Msa0817270:intron 50.0%
!! TGTGAGAGGTGTCCTCTTTG+AGG + chr5_3:52271434-52271453 Msa0817270:intron 50.0%
TCCGTCCAAACATCAGGTGA+AGG - chr5_3:52271480-52271499 None:intergenic 50.0%
TGTATGTTCAGGCAGGCTTG+TGG + chr5_3:52271836-52271855 Msa0817270:intron 50.0%
ACAAATTGCGGAGAGTCTCG+TGG + chr5_3:52271953-52271972 Msa0817270:intron 50.0%
ACAAAGTTGCAAGCCTGCAC+TGG - chr5_3:52272034-52272053 None:intergenic 50.0%
TAGACGGAGGAAGCAACTTG+AGG + chr5_3:52272300-52272319 Msa0817270:CDS 50.0%
AGACGGAGGAAGCAACTTGA+GGG + chr5_3:52272301-52272320 Msa0817270:CDS 50.0%
! GCAACGTTGTAGTGCTACTG+TGG + chr5_3:52272649-52272668 Msa0817270:three_prime_UTR 50.0%
ATGGTGCACAACACTGCAAC+GGG - chr5_3:52272856-52272875 None:intergenic 50.0%
CATGGTGCACAACACTGCAA+CGG - chr5_3:52272857-52272876 None:intergenic 50.0%
!! AGCTAGGGTTGGTGTAACGG+TGG + chr5_3:52268659-52268678 Msa0817270:CDS 55.0%
!! AGGGTTGGTGTAACGGTGGA+CGG + chr5_3:52268663-52268682 Msa0817270:CDS 55.0%
TAACGGTGGACGGTGGTGTT+CGG + chr5_3:52268673-52268692 Msa0817270:CDS 55.0%
ATTTCTCAGCTTCTCGCCGG+AGG + chr5_3:52268738-52268757 Msa0817270:CDS 55.0%
!! TTTGTTGGTGGTGGGTTGGC+AGG + chr5_3:52270089-52270108 Msa0817270:CDS 55.0%
GGGACTTGGAACTACCCTCT+TGG + chr5_3:52270468-52270487 Msa0817270:CDS 55.0%
! CTGGCTTGTGGCAGTCTTTC+AGG + chr5_3:52270781-52270800 Msa0817270:CDS 55.0%
!! TCTGGTTCTAGGGGTCAGTC+TGG - chr5_3:52271185-52271204 None:intergenic 55.0%
TGACCCCTAGAACCAGAGAC+CGG + chr5_3:52271188-52271207 Msa0817270:intron 55.0%
!! ATCCCGGTCTCTGGTTCTAG+GGG - chr5_3:52271194-52271213 None:intergenic 55.0%
!! CATCCCGGTCTCTGGTTCTA+GGG - chr5_3:52271195-52271214 None:intergenic 55.0%
AACAACTCCATCCCGGTCTC+TGG - chr5_3:52271203-52271222 None:intergenic 55.0%
GACGGAGGAAGCAACTTGAG+GGG + chr5_3:52272302-52272321 Msa0817270:CDS 55.0%
ACGGAGGAAGCAACTTGAGG+GGG + chr5_3:52272303-52272322 Msa0817270:CDS 55.0%
CGAGCGCGTGTGTACAATAC+AGG + chr5_3:52272334-52272353 Msa0817270:CDS 55.0%
TTCCGGTCAGAAGGTTTGCG+TGG + chr5_3:52272382-52272401 Msa0817270:CDS 55.0%
GGTTTGCGTGGCCTTTACAG+AGG + chr5_3:52272394-52272413 Msa0817270:CDS 55.0%
GTTGGTGTAACGGTGGACGG+TGG + chr5_3:52268666-52268685 Msa0817270:CDS 60.0%
CAACCACCGCCGCAACAGAT+TGG + chr5_3:52268711-52268730 Msa0817270:CDS 60.0%
GTTCCAATCTGTTGCGGCGG+TGG - chr5_3:52268717-52268736 None:intergenic 60.0%
CAAAGCTCCGGCAACTCCTC+CGG - chr5_3:52268757-52268776 None:intergenic 60.0%
!! GAGAGAGATGGTGGGGGTAC+AGG + chr5_3:52269658-52269677 Msa0817270:intron 60.0%
!! AAGAACGCGGCTTGCTGCAC+AGG + chr5_3:52270151-52270170 Msa0817270:CDS 60.0%
GACCCCTAGAACCAGAGACC+GGG + chr5_3:52271189-52271208 Msa0817270:intron 60.0%
!! CCATCCCGGTCTCTGGTTCT+AGG - chr5_3:52271196-52271215 None:intergenic 60.0%
CCTAGAACCAGAGACCGGGA+TGG + chr5_3:52271193-52271212 Msa0817270:intron 60.0%
AGGAAGCAACTTGAGGGGGC+TGG + chr5_3:52272307-52272326 Msa0817270:CDS 60.0%
AAGCAACTTGAGGGGGCTGG+TGG + chr5_3:52272310-52272329 Msa0817270:CDS 60.0%
! AGCAACTTGAGGGGGCTGGT+GGG + chr5_3:52272311-52272330 Msa0817270:CDS 60.0%
GGCCACGCAAACCTTCTGAC+CGG - chr5_3:52272387-52272406 None:intergenic 60.0%
GCACAACACTGCAACGGGAC+TGG - chr5_3:52272851-52272870 None:intergenic 60.0%
CTTCTCGCCGGAGGAGTTGC+CGG + chr5_3:52268747-52268766 Msa0817270:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 52268336 52273126 52268336 ID=Msa0817270;Name=Msa0817270
chr5_3 mRNA 52268336 52273126 52268336 ID=Msa0817270-mRNA-1;Parent=Msa0817270;Name=Msa0817270-mRNA-1;_AED=0.22;_eAED=0.22;_QI=312|0.71|0.87|1|1|1|8|610|365
chr5_3 exon 52268336 52268824 52268336 ID=Msa0817270-mRNA-1:exon:15699;Parent=Msa0817270-mRNA-1
chr5_3 exon 52269759 52269935 52269759 ID=Msa0817270-mRNA-1:exon:15700;Parent=Msa0817270-mRNA-1
chr5_3 exon 52270023 52270172 52270023 ID=Msa0817270-mRNA-1:exon:15701;Parent=Msa0817270-mRNA-1
chr5_3 exon 52270388 52270489 52270388 ID=Msa0817270-mRNA-1:exon:15702;Parent=Msa0817270-mRNA-1
chr5_3 exon 52270573 52270643 52270573 ID=Msa0817270-mRNA-1:exon:15703;Parent=Msa0817270-mRNA-1
chr5_3 exon 52270753 52270820 52270753 ID=Msa0817270-mRNA-1:exon:15704;Parent=Msa0817270-mRNA-1
chr5_3 exon 52271618 52271731 52271618 ID=Msa0817270-mRNA-1:exon:15705;Parent=Msa0817270-mRNA-1
chr5_3 exon 52272278 52273126 52272278 ID=Msa0817270-mRNA-1:exon:15706;Parent=Msa0817270-mRNA-1
chr5_3 five_prime_UTR 52268336 52268647 52268336 ID=Msa0817270-mRNA-1:five_prime_utr;Parent=Msa0817270-mRNA-1
chr5_3 CDS 52268648 52268824 52268648 ID=Msa0817270-mRNA-1:cds;Parent=Msa0817270-mRNA-1
chr5_3 CDS 52269759 52269935 52269759 ID=Msa0817270-mRNA-1:cds;Parent=Msa0817270-mRNA-1
chr5_3 CDS 52270023 52270172 52270023 ID=Msa0817270-mRNA-1:cds;Parent=Msa0817270-mRNA-1
chr5_3 CDS 52270388 52270489 52270388 ID=Msa0817270-mRNA-1:cds;Parent=Msa0817270-mRNA-1
chr5_3 CDS 52270573 52270643 52270573 ID=Msa0817270-mRNA-1:cds;Parent=Msa0817270-mRNA-1
chr5_3 CDS 52270753 52270820 52270753 ID=Msa0817270-mRNA-1:cds;Parent=Msa0817270-mRNA-1
chr5_3 CDS 52271618 52271731 52271618 ID=Msa0817270-mRNA-1:cds;Parent=Msa0817270-mRNA-1
chr5_3 CDS 52272278 52272516 52272278 ID=Msa0817270-mRNA-1:cds;Parent=Msa0817270-mRNA-1
chr5_3 three_prime_UTR 52272517 52273126 52272517 ID=Msa0817270-mRNA-1:three_prime_utr;Parent=Msa0817270-mRNA-1
Gene Sequence

>Msa0817270

ATGCAAACGGAAGCTAGGGTTGGTGTAACGGTGGACGGTGGTGTTCGGAAGTTAGTTAAACAACAACCACCGCCGCAACAGATTGGAACTATTTCTCAGCTTCTCGCCGGAGGAGTTGCCGGAGCTTTGAGTAAAACTTGTACTGCGCCACTTGCTAGACTCACAATCCTTTTTCAGATTCAAGGGATGCATTCTAATGTTGCAACTTTGAGGAAAGCGAGTATATGGAATGAAGCTTCAAGAATAATCCATGAAGAGGGGTTTAGGGCTTTTTGGAAAGGGAATCTAGTTACAATTGCTCACCGTTTACCTTACTCTTCTGTTAACTTTTATTCTTATGAGCATTACAAGAAGTTTCTGAGGACGATTCCGCAACTGCAAAGTAATAGAGATAATATCAGTGCAGATCTTTGTATACATTTTGTTGGTGGTGGGTTGGCAGGCATAACTGCTGCTACATCTACTTATCCCTTGGATCTTGTAAGAACGCGGCTTGCTGCACAGACGAATTTTACTTACTATAGAGGTATTGGACATGCTTTACAAACAATTGTCAAGGAAGAGGGATTACTCGGCCTTTATAAGGGACTTGGAACTACCCTCTTGACTGTTGGGCCAAATATAGCAATCAGCTTCTCCGTATATGAAAGCTTGCGATCGTTTTGGATGTCAAACAGATCCGATGATTCAACTGTTGTTGTTAGTCTGGCTTGTGGCAGTCTTTCAGGCATTGCATCATCAACAGTTGCTCATGATAAAAGCCAATGGATAAATGAAATTGTCAACATAGGATACAAAAGATCTAGAGTTCCTTCAAAGAAAGAAAACCATATATTATCAATATCAATATCAATGGATGCAACGTTTCCATTGGATCTTGTTAGACGGAGGAAGCAACTTGAGGGGGCTGGTGGGCGAGCGCGTGTGTACAATACAGGTCTCTTTGGTACATTCAAGCATATATTCCGGTCAGAAGGTTTGCGTGGCCTTTACAGAGGAATTTTACCTGAATACTATAAGGTTGTGCCTGGTGTAGGCATTTGTTTTATGACCTATGAGACACTGAAGATGGTTTTAGCGGAGATTACTACCGTATGA
Protein sequence

>Msa0817270

MQTEARVGVTVDGGVRKLVKQQPPPQQIGTISQLLAGGVAGALSKTCTAPLARLTILFQIQGMHSNVATLRKASIWNEASRIIHEEGFRAFWKGNLVTIAHRLPYSSVNFYSYEHYKKFLRTIPQLQSNRDNISADLCIHFVGGGLAGITAATSTYPLDLVRTRLAAQTNFTYYRGIGHALQTIVKEEGLLGLYKGLGTTLLTVGPNIAISFSVYESLRSFWMSNRSDDSTVVVSLACGSLSGIASSTVAHDKSQWINEIVNIGYKRSRVPSKKENHILSISISMDATFPLDLVRRRKQLEGAGGRARVYNTGLFGTFKHIFRSEGLRGLYRGILPEYYKVVPGVGICFMTYETLKMVLAEITTV*