AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0817260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0817260 MtrunA17_Chr5g0436041 96.960 329 8 1 1 329 1 327 0.0 645
Msa0817260 MtrunA17_Chr7g0240341 68.012 322 94 4 7 325 1 316 9.76e-154 434
Msa0817260 MtrunA17_Chr5g0396801 37.500 320 176 8 22 323 25 338 2.96e-59 194
Msa0817260 MtrunA17_Chr8g0347451 34.451 328 189 8 16 323 32 353 2.88e-57 189
Msa0817260 MtrunA17_Chr6g0488081 32.459 305 176 7 33 323 18 306 6.54e-44 153
Msa0817260 MtrunA17_Chr6g0488081 27.826 230 139 8 16 231 97 313 2.66e-14 72.4
Msa0817260 MtrunA17_Chr6g0488081 30.151 199 121 6 140 325 18 211 4.48e-14 72.0
Msa0817260 MtrunA17_Chr3g0131501 33.898 295 171 11 34 323 205 480 8.39e-42 151
Msa0817260 MtrunA17_Chr3g0131501 29.707 239 141 8 92 320 157 378 7.29e-19 87.0
Msa0817260 MtrunA17_Chr3g0131501 30.693 202 119 7 27 222 292 478 1.29e-15 77.4
Msa0817260 MtrunA17_Chr3g0135861 31.447 318 175 9 31 324 32 330 8.55e-42 148
Msa0817260 MtrunA17_Chr3g0135861 28.704 216 133 4 129 325 19 232 2.15e-17 81.6
Msa0817260 MtrunA17_Chr7g0252401 33.667 300 162 11 34 323 207 479 7.48e-40 146
Msa0817260 MtrunA17_Chr7g0252401 30.000 200 118 7 27 222 296 477 3.77e-18 85.1
Msa0817260 MtrunA17_Chr7g0252401 32.258 186 112 5 140 320 206 382 1.52e-17 83.2
Msa0817260 MtrunA17_Chr4g0067231 30.675 326 192 11 22 319 2 321 3.71e-39 140
Msa0817260 MtrunA17_Chr4g0067231 29.293 198 114 7 143 320 16 207 1.39e-16 79.3
Msa0817260 MtrunA17_Chr3g0137941 32.278 316 187 11 12 325 105 395 3.90e-38 140
Msa0817260 MtrunA17_Chr3g0137941 29.101 189 113 6 144 326 125 298 8.98e-14 71.6
Msa0817260 MtrunA17_Chr8g0385571 32.082 293 179 8 34 323 227 502 3.80e-37 139
Msa0817260 MtrunA17_Chr8g0385571 33.871 186 111 6 140 322 226 402 4.63e-18 84.7
Msa0817260 MtrunA17_Chr8g0385571 30.693 202 119 8 27 222 314 500 2.27e-16 79.7
Msa0817260 MtrunA17_Chr1g0149111 32.660 297 176 11 30 323 135 410 5.56e-37 137
Msa0817260 MtrunA17_Chr1g0149111 28.947 190 118 6 141 326 139 315 2.80e-16 79.3
Msa0817260 MtrunA17_Chr7g0242311 31.802 283 167 9 45 324 98 357 2.94e-36 134
Msa0817260 MtrunA17_Chr2g0296061 30.094 319 191 11 36 328 17 329 3.73e-36 133
Msa0817260 MtrunA17_Chr2g0296061 27.885 208 125 7 35 227 129 326 8.52e-13 68.2
Msa0817260 MtrunA17_Chr4g0063561 30.303 297 187 7 30 325 119 396 1.50e-35 132
Msa0817260 MtrunA17_Chr4g0006851 32.740 281 167 9 45 324 100 359 4.46e-34 128
Msa0817260 MtrunA17_Chr3g0135801 30.464 302 185 10 33 322 33 321 2.39e-30 117
Msa0817260 MtrunA17_Chr3g0115801 29.653 317 177 9 29 323 111 403 3.99e-29 115
Msa0817260 MtrunA17_Chr7g0269701 29.766 299 183 10 36 323 24 306 2.48e-25 103
Msa0817260 MtrunA17_Chr8g0382201 27.215 316 188 8 28 323 189 482 4.84e-25 105
Msa0817260 MtrunA17_Chr6g0488341 27.600 250 149 6 81 323 7 231 9.74e-24 97.8
Msa0817260 MtrunA17_Chr5g0423111 32.026 306 181 11 29 323 16 305 2.11e-23 99.0
Msa0817260 MtrunA17_Chr3g0088301 26.129 310 206 9 24 323 83 379 1.73e-22 97.1
Msa0817260 MtrunA17_Chr4g0000261 23.856 306 205 8 31 323 63 353 1.03e-21 94.4
Msa0817260 MtrunA17_Chr8g0352031 25.723 311 207 9 24 323 58 355 1.38e-21 94.0
Msa0817260 MtrunA17_Chr1g0195101 28.425 292 184 9 46 327 31 307 2.38e-21 92.4
Msa0817260 MtrunA17_Chr4g0040341 26.752 314 204 10 23 323 61 361 5.28e-21 92.4
Msa0817260 MtrunA17_Chr7g0275411 27.586 261 165 8 81 325 85 337 1.99e-20 90.5
Msa0817260 MtrunA17_Chr2g0328891 27.070 314 203 10 23 323 52 352 2.51e-20 90.5
Msa0817260 MtrunA17_Chr8g0386871 26.645 304 195 9 24 324 310 588 2.57e-20 91.7
Msa0817260 MtrunA17_Chr8g0393031 24.042 287 200 7 33 311 17 293 3.78e-20 89.4
Msa0817260 MtrunA17_Chr6g0463041 26.400 250 135 6 112 323 2 240 1.12e-19 86.7
Msa0817260 MtrunA17_Chr1g0196921 22.403 308 207 5 26 320 6 294 7.70e-19 85.5
Msa0817260 MtrunA17_Chr3g0126331 25.784 287 179 7 62 323 110 387 5.19e-17 81.3
Msa0817260 MtrunA17_Chr4g0028531 25.685 292 183 12 35 313 23 293 8.19e-17 79.7
Msa0817260 MtrunA17_Chr5g0431531 26.014 296 187 11 34 320 39 311 1.19e-16 79.3
Msa0817260 MtrunA17_Chr5g0431531 28.877 187 122 4 142 327 40 216 1.58e-14 73.2
Msa0817260 MtrunA17_Chr8g0366791 24.759 311 204 9 28 323 2 297 1.91e-16 78.6
Msa0817260 MtrunA17_Chr8g0366791 29.902 204 126 6 132 324 4 201 1.66e-13 70.1
Msa0817260 MtrunA17_Chr8g0372531 29.249 253 152 8 86 323 65 305 2.65e-16 78.2
Msa0817260 MtrunA17_Chr3g0133111 24.242 330 195 13 31 325 3 312 1.97e-14 72.8
Msa0817260 MtrunA17_Chr1g0201361 23.667 300 175 8 35 325 52 306 2.56e-14 72.4
Msa0817260 MtrunA17_Chr1g0201361 28.736 174 106 4 25 197 123 279 5.99e-12 65.5
Msa0817260 MtrunA17_Chr6g0463351 25.352 284 183 7 47 323 80 341 3.51e-14 72.8
Msa0817260 MtrunA17_Chr5g0411411 26.471 204 133 6 132 324 4 201 2.02e-13 69.7
Msa0817260 MtrunA17_Chr5g0411411 23.279 305 205 9 33 323 8 297 1.82e-12 67.0
Msa0817260 MtrunA17_Chr4g0004571 29.213 178 114 4 21 197 101 267 2.83e-13 69.3
Msa0817260 MtrunA17_Chr4g0004571 30.319 188 119 6 140 323 15 194 4.71e-13 68.9
Msa0817260 MtrunA17_Chr8g0383321 26.791 321 172 14 19 325 36 307 3.62e-13 69.3
Msa0817260 MtrunA17_Chr8g0383321 26.471 204 132 5 25 228 124 309 6.52e-12 65.5
Msa0817260 MtrunA17_Chr2g0331771 30.000 150 99 2 49 197 264 408 7.33e-13 68.9
Msa0817260 MtrunA17_Chr6g0455381 23.372 261 171 6 82 325 60 308 1.01e-12 67.8
Msa0817260 MtrunA17_Chr3g0086811 23.263 331 192 10 33 325 27 333 1.44e-12 67.8
Msa0817260 MtrunA17_Chr4g0008061 23.569 297 188 9 40 320 21 294 7.35e-12 65.1
Msa0817260 MtrunA17_Chr4g0051841 26.984 189 114 6 139 317 27 201 2.39e-11 63.9
Msa0817260 MtrunA17_Chr7g0241521 22.295 305 198 9 40 328 23 304 3.50e-11 63.2
Msa0817260 MtrunA17_Chr8g0385891 24.514 257 170 8 36 282 74 316 7.29e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0817260 AT3G55640.1 68.072 332 98 3 1 328 3 330 1.64e-161 454
Msa0817260 AT3G55640.4 68.072 332 98 3 1 328 3 330 1.64e-161 454
Msa0817260 AT3G53940.1 60.989 364 99 3 4 326 2 363 6.06e-156 441
Msa0817260 AT2G37890.1 61.424 337 117 2 1 326 1 335 1.01e-147 419
Msa0817260 AT3G55640.2 65.354 254 80 3 1 250 3 252 4.92e-113 328
Msa0817260 AT3G55640.2 30.583 206 123 7 127 320 26 223 8.70e-16 76.3
Msa0817260 AT3G55640.3 65.354 254 80 3 1 250 3 252 4.92e-113 328
Msa0817260 AT3G55640.3 30.583 206 123 7 127 320 26 223 8.70e-16 76.3
Msa0817260 AT3G53940.2 55.556 288 85 3 4 250 2 287 1.09e-104 308
Msa0817260 AT3G53940.2 27.727 220 136 5 113 320 50 258 3.75e-16 77.8
Msa0817260 AT4G01100.1 37.864 309 167 8 34 323 42 344 4.12e-58 191
Msa0817260 AT4G01100.1 31.606 193 120 5 136 320 37 225 1.64e-17 82.8
Msa0817260 AT4G01100.2 36.533 323 166 9 34 323 42 358 2.96e-55 184
Msa0817260 AT4G01100.2 30.435 207 118 6 136 320 37 239 9.26e-16 77.8
Msa0817260 AT4G01100.3 36.667 300 165 8 43 323 1 294 1.04e-53 178
Msa0817260 AT5G51050.1 34.754 305 168 11 26 323 215 495 4.16e-42 152
Msa0817260 AT4G26180.1 32.372 312 170 9 32 323 19 309 1.31e-41 147
Msa0817260 AT4G32400.1 35.235 298 171 9 30 325 110 387 2.22e-39 143
Msa0817260 AT5G61810.2 32.203 295 170 9 34 324 65 333 9.55e-38 137
Msa0817260 AT5G61810.2 29.082 196 125 6 27 222 149 330 5.57e-17 80.9
Msa0817260 AT5G61810.1 32.203 295 170 9 34 324 208 476 1.28e-36 137
Msa0817260 AT5G61810.1 29.082 196 125 6 27 222 292 473 1.56e-16 80.5
Msa0817260 AT4G26180.2 31.633 294 160 9 32 305 19 291 7.43e-36 131
Msa0817260 AT4G26180.2 29.381 194 119 6 140 320 20 208 1.37e-14 73.6
Msa0817260 AT5G48970.1 31.511 311 178 11 36 317 24 328 4.24e-35 130
Msa0817260 AT5G48970.1 30.256 195 112 7 144 320 25 213 7.77e-17 80.5
Msa0817260 AT3G21390.1 30.421 309 183 9 36 317 21 324 1.78e-34 129
Msa0817260 AT3G21390.1 29.016 193 115 7 144 320 22 208 1.00e-15 77.4
Msa0817260 AT3G21390.2 30.421 309 183 9 36 317 43 346 1.79e-34 129
Msa0817260 AT3G21390.2 28.866 194 116 7 143 320 43 230 1.14e-15 77.4
Msa0817260 AT1G14560.1 30.976 297 167 10 45 320 38 317 4.79e-34 127
Msa0817260 AT1G14560.1 29.386 228 131 8 16 225 105 320 2.84e-18 84.7
Msa0817260 AT3G51870.1 31.818 286 163 10 45 324 102 361 2.17e-33 127
Msa0817260 AT5G01500.1 30.961 281 172 7 45 324 130 389 3.65e-33 127
Msa0817260 AT5G64970.1 29.747 316 180 9 28 323 129 422 6.59e-31 121
Msa0817260 AT5G07320.1 31.488 289 162 12 43 324 218 477 1.56e-30 120
Msa0817260 AT5G07320.1 31.980 197 118 7 27 222 293 474 1.07e-15 78.2
Msa0817260 AT5G48970.2 32.812 256 146 9 82 317 8 257 5.66e-30 115
Msa0817260 AT5G48970.2 32.877 146 88 6 179 320 3 142 1.52e-13 70.1
Msa0817260 AT5G64970.2 29.450 309 176 9 35 323 12 298 5.75e-30 116
Msa0817260 AT5G56450.1 28.750 320 202 10 20 323 16 325 1.06e-29 116
Msa0817260 AT1G14560.2 30.142 282 159 10 45 305 38 302 2.79e-28 112
Msa0817260 AT1G78180.1 29.341 334 187 8 10 323 111 415 3.12e-27 110
Msa0817260 AT5G64970.3 29.195 298 169 9 28 305 129 404 3.39e-25 105
Msa0817260 AT1G14560.3 33.043 230 121 9 112 320 2 219 8.80e-24 97.8
Msa0817260 AT1G14560.3 29.386 228 131 8 16 225 7 222 7.83e-19 84.3
Msa0817260 AT4G11440.1 28.188 298 182 8 35 324 331 604 3.06e-23 100
Msa0817260 AT4G11440.2 28.188 298 182 8 35 324 331 604 3.06e-23 100
Msa0817260 AT3G08580.2 26.821 302 197 9 33 323 83 371 1.13e-22 97.8
Msa0817260 AT3G08580.1 26.821 302 197 9 33 323 83 371 1.13e-22 97.8
Msa0817260 AT1G25380.1 30.175 285 173 9 46 319 33 302 1.79e-21 94.0
Msa0817260 AT1G25380.1 27.143 210 134 7 32 231 119 319 6.13e-12 66.2
Msa0817260 AT1G25380.2 30.175 285 173 9 46 319 33 302 1.79e-21 94.0
Msa0817260 AT1G25380.2 27.143 210 134 7 32 231 119 319 6.13e-12 66.2
Msa0817260 AT4G28390.1 25.868 317 210 10 19 323 66 369 2.59e-21 94.0
Msa0817260 AT4G28390.2 25.868 317 210 10 19 323 66 369 2.59e-21 94.0
Msa0817260 AT4G27940.1 28.626 262 161 6 80 323 154 407 5.35e-21 93.2
Msa0817260 AT5G13490.1 25.667 300 203 8 33 323 87 375 9.52e-21 92.4
Msa0817260 AT5G13490.2 25.667 300 203 8 33 323 87 375 9.52e-21 92.4
Msa0817260 AT1G07030.1 27.551 294 186 8 34 320 40 313 3.91e-20 89.7
Msa0817260 AT1G07030.1 33.728 169 91 6 75 233 168 325 4.98e-14 72.4
Msa0817260 AT2G30160.1 26.733 303 192 9 34 326 42 324 8.49e-20 89.0
Msa0817260 AT3G20240.1 22.785 316 202 9 33 328 51 344 8.36e-19 86.3
Msa0817260 AT2G47490.1 26.384 307 206 9 24 323 7 300 5.68e-17 80.5
Msa0817260 AT5G01340.1 24.590 305 196 10 20 313 8 289 1.72e-16 79.3
Msa0817260 AT1G34065.2 28.076 317 173 13 19 325 59 330 2.03e-16 79.3
Msa0817260 AT1G34065.2 27.273 209 131 6 25 232 147 335 3.12e-12 67.0
Msa0817260 AT1G34065.1 28.302 318 171 15 19 325 66 337 2.32e-16 79.3
Msa0817260 AT1G34065.1 27.273 209 131 6 25 232 154 342 4.04e-12 66.6
Msa0817260 AT5G66380.1 27.157 313 189 10 36 328 12 305 2.78e-16 78.6
Msa0817260 AT1G14140.1 23.453 307 202 7 30 322 12 299 3.43e-16 78.2
Msa0817260 AT5G46800.2 24.839 310 197 9 33 323 7 299 1.02e-15 77.0
Msa0817260 AT5G46800.2 26.961 204 133 4 135 324 2 203 1.01e-12 68.2
Msa0817260 AT5G46800.3 24.839 310 197 9 33 323 7 299 1.02e-15 77.0
Msa0817260 AT5G46800.3 26.961 204 133 4 135 324 2 203 1.01e-12 68.2
Msa0817260 AT5G46800.1 24.839 310 197 9 33 323 7 299 1.02e-15 77.0
Msa0817260 AT5G46800.1 26.961 204 133 4 135 324 2 203 1.01e-12 68.2
Msa0817260 AT5G17400.1 24.138 290 198 8 32 311 12 289 9.66e-15 73.9
Msa0817260 AT5G58970.1 25.697 323 187 11 24 323 6 298 5.62e-14 72.0
Msa0817260 AT1G79900.1 30.864 162 96 4 37 197 112 258 1.74e-13 70.5
Msa0817260 AT2G33820.1 25.478 314 200 12 26 322 10 306 2.78e-13 70.1
Msa0817260 AT3G54110.1 22.517 302 197 8 40 326 21 300 1.54e-12 67.8
Msa0817260 AT4G39460.2 26.557 305 162 14 34 325 58 313 2.35e-12 67.4
Msa0817260 AT4G39460.2 27.189 217 118 7 25 230 130 317 8.40e-12 65.5
Msa0817260 AT4G39460.1 26.557 305 162 14 34 325 58 313 2.35e-12 67.4
Msa0817260 AT4G39460.1 27.189 217 118 7 25 230 130 317 8.40e-12 65.5
Msa0817260 AT4G39460.3 26.557 305 162 14 34 325 58 313 2.35e-12 67.4
Msa0817260 AT4G39460.3 27.189 217 118 7 25 230 130 317 8.40e-12 65.5
Msa0817260 AT2G46320.1 25.000 260 159 6 81 320 109 352 1.23e-11 65.5
Msa0817260 AT1G74240.1 23.284 335 208 8 16 320 18 333 6.69e-11 63.2
Msa0817260 AT2G33820.3 24.845 322 200 13 26 322 10 314 9.78e-11 62.4

Find 142 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGGCTTGTGGCAGTCTTTC+AGG 0.123605 5_3:-52234418 Msa0817260:CDS
TTCTGATGTGTGGTGGAATT+TGG 0.155049 5_3:+52236851 None:intergenic
TAATATTAGGCTGTTACTTA+TGG 0.183522 5_3:-52232488 Msa0817260:three_prime_UTR
TGCCTCAAGAGGAGTGTTTA+AGG 0.215352 5_3:+52236769 None:intergenic
CTTGAACAACATTTAATATT+AGG 0.219324 5_3:-52232501 Msa0817260:three_prime_UTR
GAAGAAGATAGGGGTAAAAT+TGG 0.225505 5_3:-52236579 Msa0817260:five_prime_UTR
AAGGACTCTGGATTTGTTAT+AGG 0.228760 5_3:-52232173 Msa0817260:three_prime_UTR
TAATCCATGAAGAGGGGTTT+AGG 0.243240 5_3:-52235372 Msa0817260:CDS
TCTGATGTGTGGTGGAATTT+GGG 0.266119 5_3:+52236852 None:intergenic
GAGAAGCTGATTGCTATATT+TGG 0.270991 5_3:+52234616 None:intergenic
ATAGGGGTAAAATTGGAATT+TGG 0.273103 5_3:-52236572 Msa0817260:five_prime_UTR
AGGGATTACTCGGCCTTATA+AGG 0.276756 5_3:-52234751 Msa0817260:CDS
AAAATAGAGAAGAAGAAGAT+AGG 0.303818 5_3:-52236590 Msa0817260:five_prime_UTR
TCTGACAAAATTCTTCAAAT+AGG 0.306711 5_3:-52232100 Msa0817260:three_prime_UTR
CTTTGAGGAAAGCGAGTATA+TGG 0.320572 5_3:-52235411 Msa0817260:CDS
AATATTAGGCTGTTACTTAT+GGG 0.322912 5_3:-52232487 Msa0817260:three_prime_UTR
ATGAAAGCTTGCGATCGTTT+TGG 0.327150 5_3:-52234588 Msa0817260:CDS
AATCCATGAAGAGGGGTTTA+GGG 0.337988 5_3:-52235371 Msa0817260:CDS
TTTACTTACTATAGAGGTAT+TGG 0.338091 5_3:-52234803 Msa0817260:CDS
TTCAACTGTTGTTGTTAGTC+TGG 0.353204 5_3:-52234437 Msa0817260:CDS
ATTCTAATGTTGCAACTTTG+AGG 0.359407 5_3:-52235426 Msa0817260:CDS
AAGCCCTAAACCCCTCTTCA+TGG 0.361238 5_3:+52235368 None:intergenic
TGTGGTGGAATTTGGGGTTA+AGG 0.361792 5_3:+52236859 None:intergenic
AAATAGAGAAGAAGAAGATA+GGG 0.362728 5_3:-52236589 Msa0817260:five_prime_UTR
GGCACAACCTTATAGTATTC+AGG 0.364759 5_3:+52232775 None:intergenic
GTGGTGGAATTTGGGGTTAA+GGG 0.367067 5_3:+52236860 None:intergenic
TTTGTTGGTGGTGGGTTGGC+AGG 0.370802 5_3:-52235108 Msa0817260:CDS
AGGACTCTGGATTTGTTATA+GGG 0.385533 5_3:-52232172 Msa0817260:three_prime_UTR
AATAACAGAAAGTGGTGTTA+AGG 0.391872 5_3:-52236614 Msa0817260:five_prime_UTR
AATCGATAAATATAACTTAA+CGG 0.395467 5_3:+52232605 None:intergenic
CGATCGCAAGCTTTCATATA+CGG 0.396542 5_3:+52234594 None:intergenic
TTTCCTAGATTCTCATGGTT+GGG 0.404016 5_3:-52232572 Msa0817260:three_prime_UTR
TATCATTGCTATAGGAAGAA+TGG 0.405778 5_3:+52232302 None:intergenic
TCAGGCATTGCATCATCAAC+AGG 0.416081 5_3:-52234400 Msa0817260:intron
GCCTCAAGAGGAGTGTTTAA+GGG 0.417164 5_3:+52236770 None:intergenic
ATGGTGCACAACACTGCAAC+GGG 0.419445 5_3:+52232345 None:intergenic
AAGTTACTTATTCATGCAAA+AGG 0.422848 5_3:-52232635 Msa0817260:three_prime_UTR
AAGAACGCGGCTTGCTGCAC+AGG 0.423096 5_3:-52235046 Msa0817260:intron
CTTCTCGCCGGAGGAGTTGC+CGG 0.423493 5_3:-52236448 Msa0817260:CDS
ACAAACAATTGTCAAGGAAG+AGG 0.426240 5_3:-52234771 Msa0817260:CDS
TTGTAAAATCTGTCTCCTTA+AGG 0.427445 5_3:+52232389 None:intergenic
AACTGCAACTCAGTGCCTTA+AGG 0.438783 5_3:-52232404 Msa0817260:three_prime_UTR
ATAACAGAAAGTGGTGTTAA+GGG 0.438835 5_3:-52236613 Msa0817260:five_prime_UTR
ATGATTACACCCATCAACTT+TGG 0.439933 5_3:-52232686 Msa0817260:exon
ATTTCCTAGATTCTCATGGT+TGG 0.444299 5_3:-52232573 Msa0817260:three_prime_UTR
GTAGTTCCAAGTCCCTTATA+AGG 0.445585 5_3:+52234738 None:intergenic
AAAACGGTAGCGTATTAAGA+AGG 0.449560 5_3:+52236743 None:intergenic
TAACGGTGGACGGTGGTGTT+CGG 0.453198 5_3:-52236522 Msa0817260:CDS
GCACAACACTGCAACGGGAC+TGG 0.455922 5_3:+52232350 None:intergenic
CAACCACCGCCGCAACAGAT+TGG 0.456851 5_3:-52236484 Msa0817260:CDS
GTTCCAATCTGTTGCGGCGG+TGG 0.457668 5_3:+52236481 None:intergenic
TAAAAGTTAACAGAAGAGTA+AGG 0.459944 5_3:+52235307 None:intergenic
TCAATTTCAATAACAGAAAG+TGG 0.465691 5_3:-52236622 Msa0817260:five_prime_UTR
GAATTTATCACTTTCACTAC+GGG 0.467120 5_3:+52232202 None:intergenic
TGCTACATCTACTTATCCCT+TGG 0.467252 5_3:-52235076 Msa0817260:CDS
ATCATTGCTATAGGAAGAAT+GGG 0.467323 5_3:+52232303 None:intergenic
GTACATTCAAGCATATATTC+CGG 0.468396 5_3:-52232834 Msa0817260:CDS
TTCAAGAATAATCCATGAAG+AGG 0.469893 5_3:-52235380 Msa0817260:CDS
TGGAGATGCAAACGGAAGCT+AGG 0.470661 5_3:-52236552 Msa0817260:exon
TGGTGCTAATGCAGACTGTT+GGG 0.472674 5_3:-52234639 Msa0817260:intron
CATGTAACTATCATTGCTAT+AGG 0.473503 5_3:+52232294 None:intergenic
ATATGCAGCAACGTTTCCAT+TGG 0.474353 5_3:-52232929 Msa0817260:intron
GGGATTACTCGGCCTTATAA+GGG 0.476028 5_3:-52234750 Msa0817260:CDS
AAATTCATTATCAAGGACTC+TGG 0.476399 5_3:-52232185 Msa0817260:three_prime_UTR
TTGCCCAACCATGAGAATCT+AGG 0.477342 5_3:+52232569 None:intergenic
CAGGTAAAATTCCTCTGTAA+AGG 0.481174 5_3:+52232794 None:intergenic
GTGTACAATACAGGTCTCTT+TGG 0.487805 5_3:-52232856 Msa0817260:CDS
CTGGTGCTAATGCAGACTGT+TGG 0.488868 5_3:-52234640 Msa0817260:intron
TTGGAATTTGGAGATGCAAA+CGG 0.491470 5_3:-52236560 Msa0817260:exon
CAAAGCTCCGGCAACTCCTC+CGG 0.494245 5_3:+52236441 None:intergenic
TGGTGGAATTTGGGGTTAAG+GGG 0.494385 5_3:+52236861 None:intergenic
CAAACAATTGTCAAGGAAGA+GGG 0.494902 5_3:-52234770 Msa0817260:CDS
CGAGCGCGTGTGTACAATAC+AGG 0.494967 5_3:-52232865 Msa0817260:CDS
AACCATCTTCAGTGTCTCAT+AGG 0.501803 5_3:+52232729 None:intergenic
GACCTATGAGACACTGAAGA+TGG 0.501950 5_3:-52232731 Msa0817260:CDS
TCTCTATTACTTTGCAGTTG+CGG 0.504953 5_3:+52235159 None:intergenic
TGAATTTATCACTTTCACTA+CGG 0.509175 5_3:+52232201 None:intergenic
AGATCAGACTCCAAAGTTGA+TGG 0.510404 5_3:+52232676 None:intergenic
CGACGTCGCTTAATAGCAAA+AGG 0.510987 5_3:-52236699 Msa0817260:five_prime_UTR
TGTTGTTCAAGTGTCTGTAC+AGG 0.520385 5_3:+52232513 None:intergenic
TTCTTATGAGCATTACAAGA+AGG 0.522188 5_3:-52235284 Msa0817260:intron
AAGTGATAAATTCATTATCA+AGG 0.526499 5_3:-52232192 Msa0817260:three_prime_UTR
AGTTACTTATTCATGCAAAA+GGG 0.528314 5_3:-52232634 Msa0817260:three_prime_UTR
TATAAGGTTGTGCCTGGTGT+AGG 0.529307 5_3:-52232766 Msa0817260:CDS
CTGATGTGTGGTGGAATTTG+GGG 0.530755 5_3:+52236853 None:intergenic
TAACAGAAGAGTAAGGTAAA+CGG 0.531609 5_3:+52235314 None:intergenic
GGAAGCTAGGGTTGGTGTAA+CGG 0.532148 5_3:-52236539 Msa0817260:CDS
CTCCGTCTAACAAGATCCAA+TGG 0.539106 5_3:+52232913 None:intergenic
TCTCATTTCCTAGATTCTCA+TGG 0.539490 5_3:-52232577 Msa0817260:three_prime_UTR
ACTCGGCCTTATAAGGGACT+TGG 0.542679 5_3:-52234744 Msa0817260:CDS
TCAAGAATAATCCATGAAGA+GGG 0.543154 5_3:-52235379 Msa0817260:CDS
TCCCTTAAACACTCCTCTTG+AGG 0.543408 5_3:-52236771 Msa0817260:five_prime_UTR
ATCTAATGCGGTTGGTTGCA+AGG 0.545109 5_3:+52236812 None:intergenic
GATAATAACATCATACCAAG+AGG 0.547655 5_3:+52234715 None:intergenic
ACGATTCGGTTTGTTCAAAA+CGG 0.549474 5_3:+52236727 None:intergenic
AGGGTTGGTGTAACGGTGGA+CGG 0.554866 5_3:-52236532 Msa0817260:CDS
GGAGATGCAAACGGAAGCTA+GGG 0.555939 5_3:-52236551 Msa0817260:exon
AACAACAACAGTTGAATCAT+CGG 0.558241 5_3:+52234444 None:intergenic
AAACGGTAGCGTATTAAGAA+GGG 0.559225 5_3:+52236744 None:intergenic
GTCAAGGAAGAGGGATTACT+CGG 0.560113 5_3:-52234761 Msa0817260:CDS
ACTATTTCTCAGCTTCTCGC+CGG 0.561608 5_3:-52236460 Msa0817260:CDS
AAGCATATATTCCGGTCAGA+AGG 0.563525 5_3:-52232826 Msa0817260:CDS
TTCCATTGGATCTTGTTAGA+CGG 0.564464 5_3:-52232915 Msa0817260:CDS
TAAGAAGGGTTTGCCTCAAG+AGG 0.564466 5_3:+52236758 None:intergenic
GTTTAAGGGATTAAAAGTGT+TGG 0.567117 5_3:+52236784 None:intergenic
CAACGTTGTAGTGCTACTGT+GGG 0.571966 5_3:-52232549 Msa0817260:three_prime_UTR
GGGACTTGGAACTACCCTCT+TGG 0.572235 5_3:-52234730 Msa0817260:CDS
AGTTGATGGGTGTAATCATA+CGG 0.572720 5_3:+52232690 None:intergenic
CCGCGTTCTTACAAGATCCA+AGG 0.576326 5_3:+52235059 None:intergenic
TGCTTTACAAACAATTGTCA+AGG 0.578320 5_3:-52234777 Msa0817260:CDS
AGACGGAGGAAGCAACTTGA+GGG 0.579075 5_3:-52232898 Msa0817260:CDS
AATAGAGAAGAAGAAGATAG+GGG 0.579487 5_3:-52236588 Msa0817260:five_prime_UTR
GATCAGACTCCAAAGTTGAT+GGG 0.580419 5_3:+52232677 None:intergenic
CGCGTTCTTACAAGATCCAA+GGG 0.583255 5_3:+52235060 None:intergenic
GGCCACGCAAACCTTCTGAC+CGG 0.592865 5_3:+52232815 None:intergenic
TAGACGGAGGAAGCAACTTG+AGG 0.593462 5_3:-52232899 Msa0817260:CDS
CATGGTGCACAACACTGCAA+CGG 0.595976 5_3:+52232344 None:intergenic
TCACTTCTCAAAAGATTACA+TGG 0.596401 5_3:+52232326 None:intergenic
GCAACGTTGTAGTGCTACTG+TGG 0.600874 5_3:-52232550 Msa0817260:three_prime_UTR
ATTTCTCAGCTTCTCGCCGG+AGG 0.601058 5_3:-52236457 Msa0817260:CDS
GAATACTATAAGGTTGTGCC+TGG 0.602847 5_3:-52232772 Msa0817260:CDS
ATGCAAACGGAAGCTAGGGT+TGG 0.605982 5_3:-52236547 Msa0817260:CDS
AATGAAATTACTATATAGCA+AGG 0.608367 5_3:-52232431 Msa0817260:three_prime_UTR
CCTTGGATCTTGTAAGAACG+CGG 0.611552 5_3:-52235059 Msa0817260:CDS
TGGTAGTGATCTAATGCGGT+TGG 0.614102 5_3:+52236804 None:intergenic
TTCCGGTCAGAAGGTTTGCG+TGG 0.617988 5_3:-52232817 Msa0817260:CDS
TACGGGCCAAATGAAAACAA+TGG 0.624377 5_3:+52232219 None:intergenic
CATTGGATCTTGTTAGACGG+AGG 0.625988 5_3:-52232912 Msa0817260:CDS
GAAATAGTTCCAATCTGTTG+CGG 0.634856 5_3:+52236475 None:intergenic
GGTTTGCGTGGCCTTTACAG+AGG 0.639547 5_3:-52232805 Msa0817260:CDS
CAAGAATAATCCATGAAGAG+GGG 0.640978 5_3:-52235378 Msa0817260:CDS
GTTGTTGTTAGTCTGGCTTG+TGG 0.646435 5_3:-52234430 Msa0817260:CDS
AGCTAGGGTTGGTGTAACGG+TGG 0.654947 5_3:-52236536 Msa0817260:CDS
ACGGAGGAAGCAACTTGAGG+GGG 0.659118 5_3:-52232896 Msa0817260:CDS
GTTGGTGTAACGGTGGACGG+TGG 0.659448 5_3:-52236529 Msa0817260:CDS
GACGGAGGAAGCAACTTGAG+GGG 0.659793 5_3:-52232897 Msa0817260:CDS
ATAGTTCCAATCTGTTGCGG+CGG 0.660860 5_3:+52236478 None:intergenic
ATAAAACAAATGCCTACACC+AGG 0.667613 5_3:+52232754 None:intergenic
AGGATTGTGAGTCTAGCAAG+TGG 0.683649 5_3:+52236400 None:intergenic
ATAATAACATCATACCAAGA+GGG 0.684442 5_3:+52234716 None:intergenic
AACGTTGTAGTGCTACTGTG+GGG 0.690126 5_3:-52232548 Msa0817260:three_prime_UTR
GTGTTGGTAGTGATCTAATG+CGG 0.786066 5_3:+52236800 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTCATTTTGTTAT+TGG - chr5_3:52232629-52232648 Msa0817260:three_prime_UTR 10.0%
!!! TTTTTATTCATTTTGTTATT+GGG - chr5_3:52232630-52232649 Msa0817260:three_prime_UTR 10.0%
!!! ATATTGATATTGATAATATA+TGG + chr5_3:52235457-52235476 None:intergenic 10.0%
!! CAAAAAAAAAAAAAAATGAA+AGG - chr5_3:52236497-52236516 Msa0817260:CDS 10.0%
!!! TTAGTAATTTTGTTGTATTT+TGG - chr5_3:52232655-52232674 Msa0817260:three_prime_UTR 15.0%
!!! TTTTGAATTGAGATAATTTT+GGG - chr5_3:52232749-52232768 Msa0817260:CDS 15.0%
!! TTATGAAAATAAGGTAAAAA+TGG - chr5_3:52232976-52232995 Msa0817260:intron 15.0%
!!! ATAATAATTCTAGAAAACTA+AGG + chr5_3:52233463-52233482 None:intergenic 15.0%
!!! TTCTTCAATTTTTATTTAAC+TGG + chr5_3:52234809-52234828 None:intergenic 15.0%
!! ATTATCAATATCAATATCAA+TGG - chr5_3:52235460-52235479 Msa0817260:intron 15.0%
!! AATCGATAAATATAACTTAA+CGG + chr5_3:52236351-52236370 None:intergenic 15.0%
!! TAAAAATGTTGTCAATTTAT+AGG - chr5_3:52236821-52236840 Msa0817260:five_prime_UTR 15.0%
!! AAAAATGTTGTCAATTTATA+GGG - chr5_3:52236822-52236841 Msa0817260:five_prime_UTR 15.0%
!!! ATAAATTTTTCACCTGAAAA+AGG + chr5_3:52232576-52232595 None:intergenic 20.0%
!! ACTGTATGAGTTAATTAATT+TGG - chr5_3:52232726-52232745 Msa0817260:CDS 20.0%
!!! GTTTTGAATTGAGATAATTT+TGG - chr5_3:52232748-52232767 Msa0817260:CDS 20.0%
!!! TTTGAATTGAGATAATTTTG+GGG - chr5_3:52232750-52232769 Msa0817260:CDS 20.0%
!! ATAAGTTGTTTATCCAAATA+GGG - chr5_3:52233225-52233244 Msa0817260:intron 20.0%
!!! TTATAATTTTTGCAGATTCA+AGG - chr5_3:52233499-52233518 Msa0817260:intron 20.0%
!!! TATAATTTTTGCAGATTCAA+GGG - chr5_3:52233500-52233519 Msa0817260:intron 20.0%
!! TTTCCAAAATTGAAATTAAG+AGG + chr5_3:52233998-52234017 None:intergenic 20.0%
!! TATGAATATACATGAATTAG+AGG + chr5_3:52234449-52234468 None:intergenic 20.0%
!! AAATTATCAGGAATATGTAT+AGG + chr5_3:52234670-52234689 None:intergenic 20.0%
!! AAATTCAATAGTTTGACTAA+AGG + chr5_3:52234833-52234852 None:intergenic 20.0%
!! TAATAAATTTCCTGAAAAAC+AGG + chr5_3:52235034-52235053 None:intergenic 20.0%
!! CATGTCATAAAATAAAACTT+GGG + chr5_3:52235089-52235108 None:intergenic 20.0%
!! ACATGTCATAAAATAAAACT+TGG + chr5_3:52235090-52235109 None:intergenic 20.0%
!! ATAAATGAAATTGTCAACAT+AGG - chr5_3:52235395-52235414 Msa0817260:CDS 20.0%
!!! AACATAATTTGTTATTGAAG+TGG + chr5_3:52235824-52235843 None:intergenic 20.0%
!! TTCAAATATGATTAGATTTC+TGG - chr5_3:52235863-52235882 Msa0817260:intron 20.0%
!!! TATAACATTACTTGATTTGA+TGG - chr5_3:52235916-52235935 Msa0817260:intron 20.0%
!!! AATTTTACCTGAATACTATA+AGG - chr5_3:52236171-52236190 Msa0817260:intron 20.0%
!! CTTGAACAACATTTAATATT+AGG - chr5_3:52236452-52236471 Msa0817260:CDS 20.0%
!! AATGAAATTACTATATAGCA+AGG - chr5_3:52236522-52236541 Msa0817260:CDS 20.0%
!! ACAAAAATAAAGAAAAGCAA+AGG + chr5_3:52236689-52236708 None:intergenic 20.0%
!! AAGTGATAAATTCATTATCA+AGG - chr5_3:52236761-52236780 Msa0817260:five_prime_UTR 20.0%
! TCAATTTCAATAACAGAAAG+TGG - chr5_3:52232331-52232350 Msa0817260:three_prime_UTR 25.0%
! AAAATAGAGAAGAAGAAGAT+AGG - chr5_3:52232363-52232382 Msa0817260:three_prime_UTR 25.0%
! AAATAGAGAAGAAGAAGATA+GGG - chr5_3:52232364-52232383 Msa0817260:three_prime_UTR 25.0%
! TTAGCGAGTTTATGAAAATA+AGG - chr5_3:52232967-52232986 Msa0817260:intron 25.0%
! AATAAGGTAAAAATGGTATG+TGG - chr5_3:52232983-52233002 Msa0817260:intron 25.0%
! ATAAGGTAAAAATGGTATGT+GGG - chr5_3:52232984-52233003 Msa0817260:intron 25.0%
! GATAAGTTGTTTATCCAAAT+AGG - chr5_3:52233224-52233243 Msa0817260:intron 25.0%
!! TATAATTTTTGTCACTGTGT+TGG - chr5_3:52233365-52233384 Msa0817260:intron 25.0%
! TAAAAGTTAACAGAAGAGTA+AGG + chr5_3:52233649-52233668 None:intergenic 25.0%
! TTACAAGAAGGTAAGAATAT+TGG - chr5_3:52233681-52233700 Msa0817260:intron 25.0%
!! GATCTTTGTATACATTTTGT+TGG - chr5_3:52233830-52233849 Msa0817260:intron 25.0%
!! CATCCTCTTAATTTCAATTT+TGG - chr5_3:52233992-52234011 Msa0817260:intron 25.0%
!! ACGAATTTTACTTACTATAG+AGG - chr5_3:52234144-52234163 Msa0817260:intron 25.0%
!! TTTACTTACTATAGAGGTAT+TGG - chr5_3:52234150-52234169 Msa0817260:intron 25.0%
! ATAATAACATCATACCAAGA+GGG + chr5_3:52234240-52234259 None:intergenic 25.0%
! ACATCAAAAGGTAAATTATC+AGG + chr5_3:52234682-52234701 None:intergenic 25.0%
!! TTTTGATGTTTCTTGCAATT+GGG - chr5_3:52234693-52234712 Msa0817260:intron 25.0%
! AAAGAAGTTAATATCTGTAG+TGG - chr5_3:52234871-52234890 Msa0817260:intron 25.0%
!! TGCCATTTGAAAATTTAGTA+AGG - chr5_3:52234985-52235004 Msa0817260:intron 25.0%
! GCCATTTGAAAATTTAGTAA+GGG - chr5_3:52234986-52235005 Msa0817260:intron 25.0%
!! TCCCTTACTAAATTTTCAAA+TGG + chr5_3:52234990-52235009 None:intergenic 25.0%
!! AATCACAATTTTCTTCGTTT+AGG + chr5_3:52235336-52235355 None:intergenic 25.0%
! TGACAATTTCATTTATCCAT+TGG + chr5_3:52235391-52235410 None:intergenic 25.0%
!! ATATGGTTTTCTTTCTTTGA+AGG + chr5_3:52235440-52235459 None:intergenic 25.0%
! TCAATATCAATATCAATGGA+TGG - chr5_3:52235464-52235483 Msa0817260:intron 25.0%
! AAAACATACTATTGCTGTAT+TGG + chr5_3:52235550-52235569 None:intergenic 25.0%
!!! TATGATTAGATTTCTGGTTT+TGG - chr5_3:52235869-52235888 Msa0817260:intron 25.0%
! AAGTTACTTATTCATGCAAA+AGG - chr5_3:52236318-52236337 Msa0817260:intron 25.0%
! AGTTACTTATTCATGCAAAA+GGG - chr5_3:52236319-52236338 Msa0817260:intron 25.0%
!! TAATATTAGGCTGTTACTTA+TGG - chr5_3:52236465-52236484 Msa0817260:CDS 25.0%
!! AATATTAGGCTGTTACTTAT+GGG - chr5_3:52236466-52236485 Msa0817260:CDS 25.0%
! TGAATTTATCACTTTCACTA+CGG + chr5_3:52236755-52236774 None:intergenic 25.0%
! TCTGACAAAATTCTTCAAAT+AGG - chr5_3:52236853-52236872 Msa0817260:five_prime_UTR 25.0%
! GTTTAAGGGATTAAAAGTGT+TGG + chr5_3:52232172-52232191 None:intergenic 30.0%
! AATAACAGAAAGTGGTGTTA+AGG - chr5_3:52232339-52232358 Msa0817260:three_prime_UTR 30.0%
! ATAACAGAAAGTGGTGTTAA+GGG - chr5_3:52232340-52232359 Msa0817260:three_prime_UTR 30.0%
AATAGAGAAGAAGAAGATAG+GGG - chr5_3:52232365-52232384 Msa0817260:three_prime_UTR 30.0%
ATAGGGGTAAAATTGGAATT+TGG - chr5_3:52232381-52232400 Msa0817260:three_prime_UTR 30.0%
TCATAACTCATAAGCTGTTT+GGG - chr5_3:52233011-52233030 Msa0817260:intron 30.0%
ACTGTTATCATTAGCTATCT+TGG + chr5_3:52233102-52233121 None:intergenic 30.0%
! CTCTCGAATTTCGATAATTT+TGG - chr5_3:52233322-52233341 Msa0817260:intron 30.0%
ATTCTAATGTTGCAACTTTG+AGG - chr5_3:52233527-52233546 Msa0817260:intron 30.0%
TTCAAGAATAATCCATGAAG+AGG - chr5_3:52233573-52233592 Msa0817260:intron 30.0%
TCAAGAATAATCCATGAAGA+GGG - chr5_3:52233574-52233593 Msa0817260:intron 30.0%
TAACAGAAGAGTAAGGTAAA+CGG + chr5_3:52233642-52233661 None:intergenic 30.0%
TTCTTATGAGCATTACAAGA+AGG - chr5_3:52233669-52233688 Msa0817260:intron 30.0%
! TTGATATGCACTTTTGTTCT+CGG - chr5_3:52233717-52233736 Msa0817260:intron 30.0%
! CTTTGTATACATTTTGTTGG+TGG - chr5_3:52233833-52233852 Msa0817260:intron 30.0%
TGCTTTACAAACAATTGTCA+AGG - chr5_3:52234176-52234195 Msa0817260:intron 30.0%
GATAATAACATCATACCAAG+AGG + chr5_3:52234241-52234260 None:intergenic 30.0%
! GGAATATATGCTTTGAGTAA+TGG + chr5_3:52234270-52234289 None:intergenic 30.0%
AAGCATATATTCCTTTCTTG+TGG - chr5_3:52234277-52234296 Msa0817260:intron 30.0%
ATGAATTAGAGGAAAATCAG+TGG + chr5_3:52234438-52234457 None:intergenic 30.0%
AACAACAACAGTTGAATCAT+CGG + chr5_3:52234512-52234531 None:intergenic 30.0%
! TCAACAGGTTAGTTATCAAA+AGG - chr5_3:52234568-52234587 Msa0817260:intron 30.0%
! TCTTGATTGTTGAACTTTTG+AGG - chr5_3:52234636-52234655 Msa0817260:intron 30.0%
CAATTGCAAGAAACATCAAA+AGG + chr5_3:52234694-52234713 None:intergenic 30.0%
! CTTTTGATGTTTCTTGCAAT+TGG - chr5_3:52234692-52234711 Msa0817260:intron 30.0%
TTTGATGTTTCTTGCAATTG+GGG - chr5_3:52234694-52234713 Msa0817260:intron 30.0%
! TTGGGGTTTGTATATTCTTT+TGG - chr5_3:52234711-52234730 Msa0817260:intron 30.0%
ATAAAATAACAACTCCATCC+CGG + chr5_3:52234964-52234983 None:intergenic 30.0%
ATATCAATATCAATGGATGG+TGG - chr5_3:52235467-52235486 Msa0817260:intron 30.0%
TTCTATTGACACTAACTACT+TGG - chr5_3:52235507-52235526 Msa0817260:intron 30.0%
!!! TTTTGGAATTAGTTCTCACT+GGG - chr5_3:52235886-52235905 Msa0817260:intron 30.0%
ATGGTGCATTTCACATAAAA+AGG - chr5_3:52235935-52235954 Msa0817260:intron 30.0%
TGGTGCATTTCACATAAAAA+GGG - chr5_3:52235936-52235955 Msa0817260:intron 30.0%
ATTTCACATAAAAAGGGATC+AGG - chr5_3:52235942-52235961 Msa0817260:intron 30.0%
GTACATTCAAGCATATATTC+CGG - chr5_3:52236119-52236138 Msa0817260:intron 30.0%
TTGTAAAATCTGTCTCCTTA+AGG + chr5_3:52236567-52236586 None:intergenic 30.0%
! GATTTTACAAGTGCATTTGA+AGG - chr5_3:52236577-52236596 Msa0817260:five_prime_UTR 30.0%
TCACTTCTCAAAAGATTACA+TGG + chr5_3:52236630-52236649 None:intergenic 30.0%
ATCATTGCTATAGGAAGAAT+GGG + chr5_3:52236653-52236672 None:intergenic 30.0%
TATCATTGCTATAGGAAGAA+TGG + chr5_3:52236654-52236673 None:intergenic 30.0%
CATGTAACTATCATTGCTAT+AGG + chr5_3:52236662-52236681 None:intergenic 30.0%
! TGTAGTCCATTGTTTTCATT+TGG - chr5_3:52236728-52236747 Msa0817260:five_prime_UTR 30.0%
GAATTTATCACTTTCACTAC+GGG + chr5_3:52236754-52236773 None:intergenic 30.0%
AAATTCATTATCAAGGACTC+TGG - chr5_3:52236768-52236787 Msa0817260:five_prime_UTR 30.0%
! TGTGTTTCTTTTCTGATGTG+TGG + chr5_3:52232115-52232134 None:intergenic 35.0%
AAACGGTAGCGTATTAAGAA+GGG + chr5_3:52232212-52232231 None:intergenic 35.0%
AAAACGGTAGCGTATTAAGA+AGG + chr5_3:52232213-52232232 None:intergenic 35.0%
!! ACGATTCGGTTTGTTCAAAA+CGG + chr5_3:52232229-52232248 None:intergenic 35.0%
GAAGAAGATAGGGGTAAAAT+TGG - chr5_3:52232374-52232393 Msa0817260:three_prime_UTR 35.0%
TTGGAATTTGGAGATGCAAA+CGG - chr5_3:52232393-52232412 Msa0817260:three_prime_UTR 35.0%
GAAATAGTTCCAATCTGTTG+CGG + chr5_3:52232481-52232500 None:intergenic 35.0%
! ACAAGTTTTACTCAAAGCTC+CGG + chr5_3:52232527-52232546 None:intergenic 35.0%
! TAGACTCACAATCCTTTTTC+AGG - chr5_3:52232561-52232580 Msa0817260:three_prime_UTR 35.0%
!! GATAATTTTGGGGACTGAAT+TGG - chr5_3:52232760-52232779 Msa0817260:CDS 35.0%
!! GGTTGTTGCTTATGATTTTG+TGG - chr5_3:52232781-52232800 Msa0817260:CDS 35.0%
GTCATAACTCATAAGCTGTT+TGG - chr5_3:52233010-52233029 Msa0817260:intron 35.0%
TGTAAGACTATGACCCTATT+TGG + chr5_3:52233241-52233260 None:intergenic 35.0%
AGTCAATCAAAACATGCACT+AGG - chr5_3:52233292-52233311 Msa0817260:intron 35.0%
! TCAAAACATGCACTAGGTTT+TGG - chr5_3:52233298-52233317 Msa0817260:intron 35.0%
AACAATGATTGAGAGAGAGA+TGG - chr5_3:52233401-52233420 Msa0817260:intron 35.0%
CAAGAATAATCCATGAAGAG+GGG - chr5_3:52233575-52233594 Msa0817260:intron 35.0%
! TTTTATACGTGCAGTTTCTG+AGG - chr5_3:52233765-52233784 Msa0817260:intron 35.0%
TCTCTATTACTTTGCAGTTG+CGG + chr5_3:52233797-52233816 None:intergenic 35.0%
!! TGTATACATTTTGTTGGTGG+TGG - chr5_3:52233836-52233855 Msa0817260:intron 35.0%
!!! GTATACATTTTGTTGGTGGT+GGG - chr5_3:52233837-52233856 Msa0817260:intron 35.0%
!! TTTTGGAAACTTGCAAGACT+TGG - chr5_3:52234009-52234028 Msa0817260:intron 35.0%
ACAAACAATTGTCAAGGAAG+AGG - chr5_3:52234182-52234201 Msa0817260:intron 35.0%
CAAACAATTGTCAAGGAAGA+GGG - chr5_3:52234183-52234202 Msa0817260:intron 35.0%
GAGAAGCTGATTGCTATATT+TGG + chr5_3:52234340-52234359 None:intergenic 35.0%
! TTCAACTGTTGTTGTTAGTC+TGG - chr5_3:52234516-52234535 Msa0817260:intron 35.0%
! TTACCTTTTTCCTACATCTC+TGG - chr5_3:52234737-52234756 Msa0817260:CDS 35.0%
!! TCACACTTTTCCTGTTTTTC+AGG - chr5_3:52235021-52235040 Msa0817260:intron 35.0%
CAAGAAATGACCTTATGTGA+CGG + chr5_3:52235136-52235155 None:intergenic 35.0%
ATGAACCTATATCATTCCCT+CGG - chr5_3:52235157-52235176 Msa0817260:CDS 35.0%
! TACTTGTTCACATGTTTCTG+AGG - chr5_3:52235270-52235289 Msa0817260:intron 35.0%
TTGCTCATGATAAAAGCCAA+TGG - chr5_3:52235372-52235391 Msa0817260:CDS 35.0%
GTTGTCAAATGGACAAGATA+TGG + chr5_3:52235689-52235708 None:intergenic 35.0%
GTCCATTTGACAACAAATTG+CGG - chr5_3:52235695-52235714 Msa0817260:intron 35.0%
CACTGGACAATTACATTTAC+AGG + chr5_3:52235771-52235790 None:intergenic 35.0%
TAAATGTAATTGTCCAGTGC+AGG - chr5_3:52235772-52235791 Msa0817260:intron 35.0%
!!! GTTTTGGAATTAGTTCTCAC+TGG - chr5_3:52235885-52235904 Msa0817260:intron 35.0%
! TTTGGAATTAGTTCTCACTG+GGG - chr5_3:52235887-52235906 Msa0817260:intron 35.0%
TAACAGATGAATTCAACCGT+AGG + chr5_3:52235997-52236016 None:intergenic 35.0%
TTCCATTGGATCTTGTTAGA+CGG - chr5_3:52236038-52236057 Msa0817260:intron 35.0%
CAGGTAAAATTCCTCTGTAA+AGG + chr5_3:52236162-52236181 None:intergenic 35.0%
ATAAAACAAATGCCTACACC+AGG + chr5_3:52236202-52236221 None:intergenic 35.0%
!! AGTTGATGGGTGTAATCATA+CGG + chr5_3:52236266-52236285 None:intergenic 35.0%
ATGATTACACCCATCAACTT+TGG - chr5_3:52236267-52236286 Msa0817260:intron 35.0%
TCTCATTTCCTAGATTCTCA+TGG - chr5_3:52236376-52236395 Msa0817260:intron 35.0%
ATTTCCTAGATTCTCATGGT+TGG - chr5_3:52236380-52236399 Msa0817260:intron 35.0%
TTTCCTAGATTCTCATGGTT+GGG - chr5_3:52236381-52236400 Msa0817260:intron 35.0%
!! AAGGACTCTGGATTTGTTAT+AGG - chr5_3:52236780-52236799 Msa0817260:five_prime_UTR 35.0%
!! AGGACTCTGGATTTGTTATA+GGG - chr5_3:52236781-52236800 Msa0817260:five_prime_UTR 35.0%
! TCTGATGTGTGGTGGAATTT+GGG + chr5_3:52232104-52232123 None:intergenic 40.0%
! TTCTGATGTGTGGTGGAATT+TGG + chr5_3:52232105-52232124 None:intergenic 40.0%
! GTTTCTTTTCTGATGTGTGG+TGG + chr5_3:52232112-52232131 None:intergenic 40.0%
!! GTGTTGGTAGTGATCTAATG+CGG + chr5_3:52232156-52232175 None:intergenic 40.0%
AATGATTGAGAGAGAGATGG+TGG - chr5_3:52233404-52233423 Msa0817260:intron 40.0%
ATGATTGAGAGAGAGATGGT+GGG - chr5_3:52233405-52233424 Msa0817260:intron 40.0%
! CTTTGAGGAAAGCGAGTATA+TGG - chr5_3:52233542-52233561 Msa0817260:intron 40.0%
TAATCCATGAAGAGGGGTTT+AGG - chr5_3:52233581-52233600 Msa0817260:intron 40.0%
AATCCATGAAGAGGGGTTTA+GGG - chr5_3:52233582-52233601 Msa0817260:intron 40.0%
!! GGTTTAGGGCTTTTTGGAAA+GGG - chr5_3:52233596-52233615 Msa0817260:intron 40.0%
TGCTACATCTACTTATCCCT+TGG - chr5_3:52233877-52233896 Msa0817260:intron 40.0%
GTAGTTCCAAGTCCCTTATA+AGG + chr5_3:52234218-52234237 None:intergenic 40.0%
CGATCGCAAGCTTTCATATA+CGG + chr5_3:52234362-52234381 None:intergenic 40.0%
! ATGAAAGCTTGCGATCGTTT+TGG - chr5_3:52234365-52234384 Msa0817260:intron 40.0%
!! GATCGTTTTGGATGTCAAAC+AGG - chr5_3:52234377-52234396 Msa0817260:intron 40.0%
AACAGTTGAATCATCGGATC+TGG + chr5_3:52234506-52234525 None:intergenic 40.0%
ATGCCAGAGATGTAGGAAAA+AGG + chr5_3:52234743-52234762 None:intergenic 40.0%
CGTCACATAAGGTCATTTCT+TGG - chr5_3:52235134-52235153 Msa0817260:CDS 40.0%
ACATACAGTTGTTGTAGCAG+TGG + chr5_3:52235577-52235596 None:intergenic 40.0%
GCTACAACAACTGTATGTTC+AGG - chr5_3:52235579-52235598 Msa0817260:intron 40.0%
!! CTCCGCAATTTGTTGTCAAA+TGG + chr5_3:52235700-52235719 None:intergenic 40.0%
TAAGAAAGACAGCACTACAC+AGG + chr5_3:52235741-52235760 None:intergenic 40.0%
TGTGTAGTGCTGTCTTTCTT+AGG - chr5_3:52235740-52235759 Msa0817260:intron 40.0%
CTTGTAGACTAGAATGCCTA+CGG - chr5_3:52235978-52235997 Msa0817260:intron 40.0%
ATATGCAGCAACGTTTCCAT+TGG - chr5_3:52236024-52236043 Msa0817260:intron 40.0%
GTGTACAATACAGGTCTCTT+TGG - chr5_3:52236097-52236116 Msa0817260:intron 40.0%
AAGCATATATTCCGGTCAGA+AGG - chr5_3:52236127-52236146 Msa0817260:intron 40.0%
GGCACAACCTTATAGTATTC+AGG + chr5_3:52236181-52236200 None:intergenic 40.0%
GAATACTATAAGGTTGTGCC+TGG - chr5_3:52236181-52236200 Msa0817260:intron 40.0%
AACCATCTTCAGTGTCTCAT+AGG + chr5_3:52236227-52236246 None:intergenic 40.0%
!!! GACACTGAAGATGGTTTTAG+CGG - chr5_3:52236231-52236250 Msa0817260:intron 40.0%
! GATCAGACTCCAAAGTTGAT+GGG + chr5_3:52236279-52236298 None:intergenic 40.0%
AGATCAGACTCCAAAGTTGA+TGG + chr5_3:52236280-52236299 None:intergenic 40.0%
TGTTGTTCAAGTGTCTGTAC+AGG + chr5_3:52236443-52236462 None:intergenic 40.0%
TACGGGCCAAATGAAAACAA+TGG + chr5_3:52236737-52236756 None:intergenic 40.0%
! TGTGGTGGAATTTGGGGTTA+AGG + chr5_3:52232097-52232116 None:intergenic 45.0%
! CTGATGTGTGGTGGAATTTG+GGG + chr5_3:52232103-52232122 None:intergenic 45.0%
! ATCTAATGCGGTTGGTTGCA+AGG + chr5_3:52232144-52232163 None:intergenic 45.0%
! TGGTAGTGATCTAATGCGGT+TGG + chr5_3:52232152-52232171 None:intergenic 45.0%
TCCCTTAAACACTCCTCTTG+AGG - chr5_3:52232182-52232201 Msa0817260:three_prime_UTR 45.0%
!! GCCTCAAGAGGAGTGTTTAA+GGG + chr5_3:52232186-52232205 None:intergenic 45.0%
!! TGCCTCAAGAGGAGTGTTTA+AGG + chr5_3:52232187-52232206 None:intergenic 45.0%
TAAGAAGGGTTTGCCTCAAG+AGG + chr5_3:52232198-52232217 None:intergenic 45.0%
!!! GCGACGTCGTTTTTACGATT+CGG + chr5_3:52232243-52232262 None:intergenic 45.0%
CGACGTCGCTTAATAGCAAA+AGG - chr5_3:52232254-52232273 Msa0817260:three_prime_UTR 45.0%
ATAGTTCCAATCTGTTGCGG+CGG + chr5_3:52232478-52232497 None:intergenic 45.0%
! ACTATTTCTCAGCTTCTCGC+CGG - chr5_3:52232493-52232512 Msa0817260:three_prime_UTR 45.0%
AGGATTGTGAGTCTAGCAAG+TGG + chr5_3:52232556-52232575 None:intergenic 45.0%
TGATTGAGAGAGAGATGGTG+GGG - chr5_3:52233406-52233425 Msa0817260:intron 45.0%
!! AAGAGGGGTTTAGGGCTTTT+TGG - chr5_3:52233590-52233609 Msa0817260:intron 45.0%
!! GGGTTTAGGGCTTTTTGGAA+AGG - chr5_3:52233595-52233614 Msa0817260:intron 45.0%
!!! ACATTTTGTTGGTGGTGGGT+TGG - chr5_3:52233841-52233860 Msa0817260:intron 45.0%
CGCGTTCTTACAAGATCCAA+GGG + chr5_3:52233896-52233915 None:intergenic 45.0%
CCTTGGATCTTGTAAGAACG+CGG - chr5_3:52233894-52233913 Msa0817260:intron 45.0%
GTCAAGGAAGAGGGATTACT+CGG - chr5_3:52234192-52234211 Msa0817260:intron 45.0%
! AGGGATTACTCGGCCTTATA+AGG - chr5_3:52234202-52234221 Msa0817260:intron 45.0%
! GGGATTACTCGGCCTTATAA+GGG - chr5_3:52234203-52234222 Msa0817260:intron 45.0%
AGTGGCTAAGTCCACAAGAA+AGG + chr5_3:52234291-52234310 None:intergenic 45.0%
TTGTGGACTTAGCCACTTAC+TGG - chr5_3:52234294-52234313 Msa0817260:intron 45.0%
TCTGCATTAGCACCAGTAAG+TGG + chr5_3:52234309-52234328 None:intergenic 45.0%
! TGGTGCTAATGCAGACTGTT+GGG - chr5_3:52234314-52234333 Msa0817260:intron 45.0%
! GTTGTTGTTAGTCTGGCTTG+TGG - chr5_3:52234523-52234542 Msa0817260:intron 45.0%
! TCAGGCATTGCATCATCAAC+AGG - chr5_3:52234553-52234572 Msa0817260:intron 45.0%
ACACTTGATGCCAGAGATGT+AGG + chr5_3:52234750-52234769 None:intergenic 45.0%
GGAATCAGCTGCATAACTTG+GGG + chr5_3:52235115-52235134 None:intergenic 45.0%
CGGAATCAGCTGCATAACTT+GGG + chr5_3:52235116-52235135 None:intergenic 45.0%
ACGGAATCAGCTGCATAACT+TGG + chr5_3:52235117-52235136 None:intergenic 45.0%
GGTAACCGAGGGAATGATAT+AGG + chr5_3:52235165-52235184 None:intergenic 45.0%
! CTCTCACATTTGGTAACCGA+GGG + chr5_3:52235176-52235195 None:intergenic 45.0%
AAGAGGACACCTCTCACATT+TGG + chr5_3:52235186-52235205 None:intergenic 45.0%
! GTGAGAAGCATACCTCAAAG+AGG + chr5_3:52235203-52235222 None:intergenic 45.0%
TTGAGGTATGCTTCTCACCT+AGG - chr5_3:52235205-52235224 Msa0817260:intron 45.0%
ACATCAGGTGAAGGTAACCT+AGG + chr5_3:52235225-52235244 None:intergenic 45.0%
GGTTACCTTCACCTGATGTT+TGG - chr5_3:52235226-52235245 Msa0817260:intron 45.0%
ACCTTCACCTGATGTTTGGA+CGG - chr5_3:52235230-52235249 Msa0817260:intron 45.0%
CTGATATCCGTCCAAACATC+AGG + chr5_3:52235240-52235259 None:intergenic 45.0%
CAACAACTGTATGTTCAGGC+AGG - chr5_3:52235583-52235602 Msa0817260:intron 45.0%
CTCCGTCTAACAAGATCCAA+TGG + chr5_3:52236043-52236062 None:intergenic 45.0%
CATTGGATCTTGTTAGACGG+AGG - chr5_3:52236041-52236060 Msa0817260:intron 45.0%
TATAAGGTTGTGCCTGGTGT+AGG - chr5_3:52236187-52236206 Msa0817260:intron 45.0%
GACCTATGAGACACTGAAGA+TGG - chr5_3:52236222-52236241 Msa0817260:intron 45.0%
TTGCCCAACCATGAGAATCT+AGG + chr5_3:52236387-52236406 None:intergenic 45.0%
! CAACGTTGTAGTGCTACTGT+GGG - chr5_3:52236404-52236423 Msa0817260:CDS 45.0%
! AACGTTGTAGTGCTACTGTG+GGG - chr5_3:52236405-52236424 Msa0817260:CDS 45.0%
AACTGCAACTCAGTGCCTTA+AGG - chr5_3:52236549-52236568 Msa0817260:CDS 45.0%
TGGAGATGCAAACGGAAGCT+AGG - chr5_3:52232401-52232420 Msa0817260:three_prime_UTR 50.0%
GGAGATGCAAACGGAAGCTA+GGG - chr5_3:52232402-52232421 Msa0817260:three_prime_UTR 50.0%
ATGCAAACGGAAGCTAGGGT+TGG - chr5_3:52232406-52232425 Msa0817260:three_prime_UTR 50.0%
!! GGAAGCTAGGGTTGGTGTAA+CGG - chr5_3:52232414-52232433 Msa0817260:three_prime_UTR 50.0%
! GATTGAGAGAGAGATGGTGG+GGG - chr5_3:52233407-52233426 Msa0817260:intron 50.0%
! GGTGGGGGTACAGGTTATTT+AGG - chr5_3:52233422-52233441 Msa0817260:intron 50.0%
AAGCCCTAAACCCCTCTTCA+TGG + chr5_3:52233588-52233607 None:intergenic 50.0%
CCGCGTTCTTACAAGATCCA+AGG + chr5_3:52233897-52233916 None:intergenic 50.0%
! ACTCGGCCTTATAAGGGACT+TGG - chr5_3:52234209-52234228 Msa0817260:intron 50.0%
! CTGGTGCTAATGCAGACTGT+TGG - chr5_3:52234313-52234332 Msa0817260:intron 50.0%
! GCAGCTGATTCCGTCACATA+AGG - chr5_3:52235123-52235142 Msa0817260:CDS 50.0%
! CCTCTCACATTTGGTAACCG+AGG + chr5_3:52235177-52235196 None:intergenic 50.0%
CCTCGGTTACCAAATGTGAG+AGG - chr5_3:52235174-52235193 Msa0817260:CDS 50.0%
!! TGTGAGAGGTGTCCTCTTTG+AGG - chr5_3:52235188-52235207 Msa0817260:intron 50.0%
TCCGTCCAAACATCAGGTGA+AGG + chr5_3:52235234-52235253 None:intergenic 50.0%
TGTATGTTCAGGCAGGCTTG+TGG - chr5_3:52235590-52235609 Msa0817260:intron 50.0%
ACAAATTGCGGAGAGTCTCG+TGG - chr5_3:52235707-52235726 Msa0817260:intron 50.0%
ACAAAGTTGCAAGCCTGCAC+TGG + chr5_3:52235788-52235807 None:intergenic 50.0%
TAGACGGAGGAAGCAACTTG+AGG - chr5_3:52236054-52236073 Msa0817260:intron 50.0%
AGACGGAGGAAGCAACTTGA+GGG - chr5_3:52236055-52236074 Msa0817260:intron 50.0%
! GCAACGTTGTAGTGCTACTG+TGG - chr5_3:52236403-52236422 Msa0817260:CDS 50.0%
ATGGTGCACAACACTGCAAC+GGG + chr5_3:52236611-52236630 None:intergenic 50.0%
CATGGTGCACAACACTGCAA+CGG + chr5_3:52236612-52236631 None:intergenic 50.0%
!! AGCTAGGGTTGGTGTAACGG+TGG - chr5_3:52232417-52232436 Msa0817260:three_prime_UTR 55.0%
!! AGGGTTGGTGTAACGGTGGA+CGG - chr5_3:52232421-52232440 Msa0817260:three_prime_UTR 55.0%
TAACGGTGGACGGTGGTGTT+CGG - chr5_3:52232431-52232450 Msa0817260:three_prime_UTR 55.0%
ATTTCTCAGCTTCTCGCCGG+AGG - chr5_3:52232496-52232515 Msa0817260:three_prime_UTR 55.0%
!! TTTGTTGGTGGTGGGTTGGC+AGG - chr5_3:52233845-52233864 Msa0817260:intron 55.0%
GGGACTTGGAACTACCCTCT+TGG - chr5_3:52234223-52234242 Msa0817260:intron 55.0%
! CTGGCTTGTGGCAGTCTTTC+AGG - chr5_3:52234535-52234554 Msa0817260:intron 55.0%
!! TCTGGTTCTAGGGGTCAGTC+TGG + chr5_3:52234939-52234958 None:intergenic 55.0%
TGACCCCTAGAACCAGAGAC+CGG - chr5_3:52234942-52234961 Msa0817260:intron 55.0%
!! ATCCCGGTCTCTGGTTCTAG+GGG + chr5_3:52234948-52234967 None:intergenic 55.0%
!! CATCCCGGTCTCTGGTTCTA+GGG + chr5_3:52234949-52234968 None:intergenic 55.0%
AACAACTCCATCCCGGTCTC+TGG + chr5_3:52234957-52234976 None:intergenic 55.0%
GACGGAGGAAGCAACTTGAG+GGG - chr5_3:52236056-52236075 Msa0817260:intron 55.0%
ACGGAGGAAGCAACTTGAGG+GGG - chr5_3:52236057-52236076 Msa0817260:intron 55.0%
CGAGCGCGTGTGTACAATAC+AGG - chr5_3:52236088-52236107 Msa0817260:intron 55.0%
TTCCGGTCAGAAGGTTTGCG+TGG - chr5_3:52236136-52236155 Msa0817260:intron 55.0%
GGTTTGCGTGGCCTTTACAG+AGG - chr5_3:52236148-52236167 Msa0817260:intron 55.0%
GTTGGTGTAACGGTGGACGG+TGG - chr5_3:52232424-52232443 Msa0817260:three_prime_UTR 60.0%
CAACCACCGCCGCAACAGAT+TGG - chr5_3:52232469-52232488 Msa0817260:three_prime_UTR 60.0%
GTTCCAATCTGTTGCGGCGG+TGG + chr5_3:52232475-52232494 None:intergenic 60.0%
CAAAGCTCCGGCAACTCCTC+CGG + chr5_3:52232515-52232534 None:intergenic 60.0%
!! GAGAGAGATGGTGGGGGTAC+AGG - chr5_3:52233413-52233432 Msa0817260:intron 60.0%
!! AAGAACGCGGCTTGCTGCAC+AGG - chr5_3:52233907-52233926 Msa0817260:intron 60.0%
GACCCCTAGAACCAGAGACC+GGG - chr5_3:52234943-52234962 Msa0817260:intron 60.0%
!! CCATCCCGGTCTCTGGTTCT+AGG + chr5_3:52234950-52234969 None:intergenic 60.0%
CCTAGAACCAGAGACCGGGA+TGG - chr5_3:52234947-52234966 Msa0817260:intron 60.0%
AGGAAGCAACTTGAGGGGGC+TGG - chr5_3:52236061-52236080 Msa0817260:intron 60.0%
AAGCAACTTGAGGGGGCTGG+TGG - chr5_3:52236064-52236083 Msa0817260:intron 60.0%
! AGCAACTTGAGGGGGCTGGT+GGG - chr5_3:52236065-52236084 Msa0817260:intron 60.0%
GGCCACGCAAACCTTCTGAC+CGG + chr5_3:52236141-52236160 None:intergenic 60.0%
GCACAACACTGCAACGGGAC+TGG + chr5_3:52236606-52236625 None:intergenic 60.0%
CTTCTCGCCGGAGGAGTTGC+CGG - chr5_3:52232505-52232524 Msa0817260:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 52232094 52236881 52232094 ID=Msa0817260;Name=Msa0817260
chr5_3 mRNA 52232094 52236881 52232094 ID=Msa0817260-mRNA-1;Parent=Msa0817260;Name=Msa0817260-mRNA-1;_AED=0.24;_eAED=0.24;_QI=312|0.83|0.85|1|1|1|7|611|329
chr5_3 exon 52232094 52232943 52232094 ID=Msa0817260-mRNA-1:exon:15742;Parent=Msa0817260-mRNA-1
chr5_3 exon 52234401 52234468 52234401 ID=Msa0817260-mRNA-1:exon:15741;Parent=Msa0817260-mRNA-1
chr5_3 exon 52234577 52234647 52234577 ID=Msa0817260-mRNA-1:exon:15740;Parent=Msa0817260-mRNA-1
chr5_3 exon 52234724 52234831 52234724 ID=Msa0817260-mRNA-1:exon:15739;Parent=Msa0817260-mRNA-1
chr5_3 exon 52235047 52235196 52235047 ID=Msa0817260-mRNA-1:exon:15738;Parent=Msa0817260-mRNA-1
chr5_3 exon 52235285 52235461 52235285 ID=Msa0817260-mRNA-1:exon:15737;Parent=Msa0817260-mRNA-1
chr5_3 exon 52236393 52236881 52236393 ID=Msa0817260-mRNA-1:exon:15736;Parent=Msa0817260-mRNA-1
chr5_3 five_prime_UTR 52236570 52236881 52236570 ID=Msa0817260-mRNA-1:five_prime_utr;Parent=Msa0817260-mRNA-1
chr5_3 CDS 52236393 52236569 52236393 ID=Msa0817260-mRNA-1:cds;Parent=Msa0817260-mRNA-1
chr5_3 CDS 52235285 52235461 52235285 ID=Msa0817260-mRNA-1:cds;Parent=Msa0817260-mRNA-1
chr5_3 CDS 52235047 52235196 52235047 ID=Msa0817260-mRNA-1:cds;Parent=Msa0817260-mRNA-1
chr5_3 CDS 52234724 52234831 52234724 ID=Msa0817260-mRNA-1:cds;Parent=Msa0817260-mRNA-1
chr5_3 CDS 52234577 52234647 52234577 ID=Msa0817260-mRNA-1:cds;Parent=Msa0817260-mRNA-1
chr5_3 CDS 52234401 52234468 52234401 ID=Msa0817260-mRNA-1:cds;Parent=Msa0817260-mRNA-1
chr5_3 CDS 52232705 52232943 52232705 ID=Msa0817260-mRNA-1:cds;Parent=Msa0817260-mRNA-1
chr5_3 three_prime_UTR 52232094 52232704 52232094 ID=Msa0817260-mRNA-1:three_prime_utr;Parent=Msa0817260-mRNA-1
Gene Sequence

>Msa0817260

ATGCAAACGGAAGCTAGGGTTGGTGTAACGGTGGACGGTGGTGTTCGGAAGTTAGTTAAACAACAACCACCGCCGCAACAGATTGGAACTATTTCTCAGCTTCTCGCCGGAGGAGTTGCCGGAGCTTTGAGTAAAACTTGTACTGCGCCACTTGCTAGACTCACAATCCTTTTTCAGATTCAAGGGATGCATTCTAATGTTGCAACTTTGAGGAAAGCGAGTATATGGAATGAAGCTTCAAGAATAATCCATGAAGAGGGGTTTAGGGCTTTTTGGAAAGGGAATCTAGTTACAATTGCTCACCGTTTACCTTACTCTTCTGTTAACTTTTATTCTTATGAGCATTACAAGAAGTTTCTGAGGACGATTCCGCAACTGCAAAGTAATAGAGATAATATCAGTGCAGATCTTTGTATACATTTTGTTGGTGGTGGGTTGGCAGGCATAACTGCTGCTACATCTACTTATCCCTTGGATCTTGTAAGAACGCGGCTTGCTGCACAGACGAATTTTACTTACTATAGAGGTATTGGACATGCTTTACAAACAATTGTCAAGGAAGAGGGATTACTCGGCCTTATAAGGGACTTGGAACTACCCTCTTGGTATGATACTGTTGGGCCAAATATAGCAATCAGCTTCTCCGTATATGAAAGCTTGCGATCGTTTTGGATGTCAAACAGATCCGATGATTCAACTGTTGTTGTTAGTCTGGCTTGTGGCAGTCTTTCAGGCATTGCATCATCAACAGCAACGTTTCCATTGGATCTTGTTAGACGGAGGAAGCAACTTGAGGGGGCTGGTGGGCGAGCGCGTGTGTACAATACAGGTCTCTTTGGTACATTCAAGCATATATTCCGGTCAGAAGGTTTGCGTGGCCTTTACAGAGGAATTTTACCTGAATACTATAAGGTTGTGCCTGGTGTAGGCATTTGTTTTATGACCTATGAGACACTGAAGATGGTTTTAGCGGAGATTACTACCGTATGA
Protein sequence

>Msa0817260

MQTEARVGVTVDGGVRKLVKQQPPPQQIGTISQLLAGGVAGALSKTCTAPLARLTILFQIQGMHSNVATLRKASIWNEASRIIHEEGFRAFWKGNLVTIAHRLPYSSVNFYSYEHYKKFLRTIPQLQSNRDNISADLCIHFVGGGLAGITAATSTYPLDLVRTRLAAQTNFTYYRGIGHALQTIVKEEGLLGLIRDLELPSWYDTVGPNIAISFSVYESLRSFWMSNRSDDSTVVVSLACGSLSGIASSTATFPLDLVRRRKQLEGAGGRARVYNTGLFGTFKHIFRSEGLRGLYRGILPEYYKVVPGVGICFMTYETLKMVLAEITTV*