Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586680 | XP_003604324.2 | 76.596 | 188 | 37 | 4 | 1 | 186 | 1 | 183 | 1.24e-87 | 273 |
| Msa0586680 | XP_003604324.2 | 90.052 | 191 | 17 | 2 | 187 | 375 | 16 | 206 | 2.73e-110 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586680 | sp|Q9T072|BH025_ARATH | 40.244 | 164 | 84 | 5 | 223 | 373 | 163 | 325 | 8.46e-23 | 100 |
| Msa0586680 | sp|Q9T072|BH025_ARATH | 40.972 | 144 | 71 | 5 | 57 | 187 | 163 | 305 | 1.43e-20 | 94.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586680 | G7JFR2 | 76.596 | 188 | 37 | 4 | 1 | 186 | 1 | 183 | 5.94e-88 | 273 |
| Msa0586680 | G7JFR2 | 90.052 | 191 | 17 | 2 | 187 | 375 | 16 | 206 | 1.31e-110 | 331 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0207030 | Msa0586680 | 0.803761 | 2.986906e-49 | -8.615850e-47 |
| Msa0506830 | Msa0586680 | 0.809915 | 1.494365e-50 | -8.615850e-47 |
| Msa0586680 | Msa0626690 | 0.889338 | 2.649334e-73 | -8.615850e-47 |
| Msa0586680 | Msa0663230 | 0.971106 | 1.210581e-132 | -8.615850e-47 |
| Msa0586680 | Msa0721280 | 0.811562 | 6.579251e-51 | -8.615850e-47 |
| Msa0586680 | Msa0811040 | 0.800558 | 1.362468e-48 | -8.615850e-47 |
| Msa0586680 | Msa0867980 | 0.880782 | 4.133287e-70 | -8.615850e-47 |
| Msa0586680 | Msa1040980 | 0.806845 | 6.748789e-50 | -8.615850e-47 |
| Msa0586680 | Msa1063420 | 0.804300 | 2.307986e-49 | -8.615850e-47 |
| Msa0586680 | Msa1208790 | 0.816301 | 5.933834e-52 | -8.615850e-47 |
| Msa0586680 | Msa1258980 | 0.821375 | 4.174305e-53 | -8.615850e-47 |
| Msa0586680 | Msa1330630 | 0.823210 | 1.565577e-53 | -8.615850e-47 |
| Msa0586680 | Msa1337170 | 0.812894 | 3.369305e-51 | -8.615850e-47 |
| Msa0586680 | Msa1341490 | 0.812296 | 4.554297e-51 | -8.615850e-47 |
| Msa0586680 | Msa1357890 | 0.809040 | 2.303262e-50 | -8.615850e-47 |
| Msa0586680 | Msa1391750 | 0.814601 | 1.417732e-51 | -8.615850e-47 |
| Msa0586680 | Msa1398090 | 0.820509 | 6.605363e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586680 | MtrunA17_Chr4g0002831 | 90.052 | 191 | 17 | 2 | 187 | 375 | 16 | 206 | 2.51e-114 | 331 |
| Msa0586680 | MtrunA17_Chr4g0002831 | 76.596 | 188 | 37 | 4 | 1 | 186 | 1 | 183 | 1.14e-91 | 273 |
| Msa0586680 | MtrunA17_Chr4g0002851 | 83.871 | 186 | 19 | 2 | 1 | 186 | 1 | 175 | 6.02e-103 | 302 |
| Msa0586680 | MtrunA17_Chr4g0002851 | 73.958 | 192 | 39 | 2 | 187 | 375 | 15 | 198 | 2.51e-90 | 270 |
| Msa0586680 | MtrunA17_Chr7g0233441 | 82.796 | 186 | 21 | 2 | 1 | 186 | 1 | 175 | 1.35e-99 | 293 |
| Msa0586680 | MtrunA17_Chr7g0233441 | 78.836 | 189 | 35 | 2 | 187 | 375 | 15 | 198 | 2.63e-96 | 285 |
| Msa0586680 | MtrunA17_Chr2g0333621 | 48.485 | 165 | 67 | 4 | 223 | 372 | 149 | 310 | 1.81e-36 | 134 |
| Msa0586680 | MtrunA17_Chr2g0333621 | 45.139 | 144 | 63 | 4 | 57 | 186 | 149 | 290 | 2.88e-25 | 104 |
| Msa0586680 | MtrunA17_Chr4g0002801 | 45.833 | 168 | 74 | 4 | 222 | 372 | 162 | 329 | 7.51e-35 | 130 |
| Msa0586680 | MtrunA17_Chr4g0002801 | 35.052 | 194 | 92 | 5 | 12 | 186 | 131 | 309 | 1.32e-21 | 94.4 |
| Msa0586680 | MtrunA17_Chr5g0400621 | 42.708 | 192 | 80 | 5 | 197 | 370 | 147 | 326 | 5.18e-33 | 125 |
| Msa0586680 | MtrunA17_Chr5g0400621 | 44.882 | 127 | 60 | 2 | 70 | 186 | 182 | 308 | 5.95e-21 | 92.4 |
| Msa0586680 | MtrunA17_Chr4g0002781 | 44.848 | 165 | 77 | 3 | 222 | 372 | 184 | 348 | 1.48e-32 | 125 |
| Msa0586680 | MtrunA17_Chr4g0002781 | 40.816 | 147 | 69 | 4 | 56 | 186 | 184 | 328 | 3.37e-22 | 96.3 |
| Msa0586680 | MtrunA17_Chr2g0333641 | 43.030 | 165 | 79 | 3 | 223 | 375 | 148 | 309 | 1.89e-29 | 115 |
| Msa0586680 | MtrunA17_Chr2g0333641 | 40.845 | 142 | 69 | 3 | 57 | 186 | 148 | 286 | 1.72e-18 | 85.1 |
| Msa0586680 | MtrunA17_Chr8g0336681 | 42.683 | 164 | 76 | 3 | 224 | 369 | 168 | 331 | 2.86e-28 | 113 |
| Msa0586680 | MtrunA17_Chr8g0336681 | 38.411 | 151 | 67 | 4 | 58 | 186 | 168 | 314 | 2.66e-19 | 88.2 |
| Msa0586680 | MtrunA17_Chr2g0333611 | 45.223 | 157 | 77 | 5 | 222 | 369 | 55 | 211 | 2.23e-27 | 107 |
| Msa0586680 | MtrunA17_Chr2g0333611 | 43.357 | 143 | 66 | 6 | 56 | 186 | 55 | 194 | 2.30e-21 | 91.3 |
| Msa0586680 | MtrunA17_Chr5g0400661 | 40.230 | 174 | 80 | 3 | 223 | 372 | 160 | 333 | 6.38e-27 | 109 |
| Msa0586680 | MtrunA17_Chr5g0400661 | 41.304 | 138 | 58 | 3 | 71 | 185 | 175 | 312 | 2.85e-20 | 90.5 |
| Msa0586680 | MtrunA17_Chr4g0054581 | 42.236 | 161 | 61 | 4 | 234 | 371 | 221 | 372 | 1.92e-26 | 108 |
| Msa0586680 | MtrunA17_Chr4g0054581 | 36.691 | 139 | 56 | 5 | 70 | 185 | 223 | 352 | 1.48e-14 | 74.3 |
| Msa0586680 | MtrunA17_Chr4g0054621 | 40.288 | 139 | 78 | 3 | 237 | 371 | 198 | 335 | 1.38e-24 | 102 |
| Msa0586680 | MtrunA17_Chr4g0054621 | 34.454 | 119 | 73 | 2 | 71 | 185 | 198 | 315 | 1.63e-12 | 67.8 |
| Msa0586680 | MtrunA17_Chr2g0280161 | 37.195 | 164 | 91 | 3 | 223 | 374 | 188 | 351 | 7.80e-24 | 100 |
| Msa0586680 | MtrunA17_Chr2g0280161 | 38.583 | 127 | 67 | 2 | 71 | 186 | 203 | 329 | 2.01e-18 | 85.5 |
| Msa0586680 | MtrunA17_Chr4g0033391 | 39.216 | 153 | 72 | 2 | 234 | 372 | 170 | 315 | 8.18e-24 | 100 |
| Msa0586680 | MtrunA17_Chr4g0033391 | 34.899 | 149 | 75 | 3 | 53 | 186 | 154 | 295 | 6.61e-16 | 77.8 |
| Msa0586680 | MtrunA17_Chr4g0054561 | 39.623 | 159 | 87 | 6 | 223 | 372 | 166 | 324 | 7.50e-23 | 97.8 |
| Msa0586680 | MtrunA17_Chr4g0054561 | 39.200 | 125 | 68 | 4 | 70 | 186 | 180 | 304 | 5.04e-14 | 72.4 |
| Msa0586680 | MtrunA17_Chr4g0033291 | 37.838 | 148 | 81 | 2 | 234 | 372 | 178 | 323 | 1.08e-22 | 97.4 |
| Msa0586680 | MtrunA17_Chr4g0033291 | 32.639 | 144 | 85 | 3 | 53 | 186 | 162 | 303 | 4.24e-15 | 75.5 |
| Msa0586680 | MtrunA17_Chr2g0307131 | 38.961 | 154 | 68 | 3 | 234 | 369 | 202 | 347 | 1.17e-21 | 95.1 |
| Msa0586680 | MtrunA17_Chr2g0307131 | 36.567 | 134 | 61 | 3 | 70 | 186 | 204 | 330 | 2.32e-14 | 73.6 |
| Msa0586680 | MtrunA17_Chr2g0333541 | 37.952 | 166 | 88 | 5 | 224 | 375 | 106 | 270 | 1.26e-21 | 93.6 |
| Msa0586680 | MtrunA17_Chr2g0333541 | 33.775 | 151 | 85 | 4 | 50 | 186 | 98 | 247 | 1.38e-13 | 70.5 |
| Msa0586680 | MtrunA17_Chr2g0307141 | 37.662 | 154 | 70 | 3 | 234 | 369 | 206 | 351 | 2.85e-21 | 94.0 |
| Msa0586680 | MtrunA17_Chr2g0307141 | 34.328 | 134 | 64 | 3 | 70 | 186 | 208 | 334 | 3.97e-13 | 70.1 |
| Msa0586680 | MtrunA17_Chr4g0049331 | 35.758 | 165 | 91 | 4 | 223 | 374 | 146 | 308 | 3.32e-21 | 92.8 |
| Msa0586680 | MtrunA17_Chr4g0049331 | 35.433 | 127 | 72 | 2 | 70 | 186 | 160 | 286 | 3.22e-16 | 78.6 |
| Msa0586680 | MtrunA17_Chr5g0400641 | 38.060 | 134 | 73 | 2 | 236 | 359 | 23 | 156 | 5.09e-21 | 89.0 |
| Msa0586680 | MtrunA17_Chr5g0400641 | 38.583 | 127 | 68 | 2 | 70 | 186 | 23 | 149 | 3.44e-19 | 84.0 |
| Msa0586680 | MtrunA17_Chr7g0249811 | 37.580 | 157 | 82 | 3 | 222 | 369 | 175 | 324 | 2.42e-20 | 90.9 |
| Msa0586680 | MtrunA17_Chr4g0054551 | 38.365 | 159 | 89 | 6 | 223 | 372 | 166 | 324 | 2.59e-20 | 90.9 |
| Msa0586680 | MtrunA17_Chr4g0054551 | 38.400 | 125 | 69 | 4 | 70 | 186 | 180 | 304 | 1.15e-12 | 68.2 |
| Msa0586680 | MtrunA17_Chr4g0033281 | 37.241 | 145 | 85 | 1 | 234 | 372 | 176 | 320 | 5.80e-20 | 89.7 |
| Msa0586680 | MtrunA17_Chr4g0033281 | 34.043 | 141 | 86 | 2 | 53 | 186 | 160 | 300 | 1.09e-13 | 71.2 |
| Msa0586680 | MtrunA17_Chr6g0468491 | 36.667 | 150 | 79 | 3 | 234 | 370 | 160 | 306 | 7.15e-20 | 89.4 |
| Msa0586680 | MtrunA17_Chr6g0468491 | 36.691 | 139 | 62 | 5 | 70 | 191 | 162 | 291 | 3.82e-13 | 69.7 |
| Msa0586680 | MtrunA17_Chr5g0400671 | 29.744 | 195 | 120 | 3 | 198 | 375 | 131 | 325 | 3.01e-19 | 87.8 |
| Msa0586680 | MtrunA17_Chr5g0400671 | 39.200 | 125 | 67 | 3 | 70 | 186 | 179 | 302 | 1.56e-17 | 82.8 |
| Msa0586680 | MtrunA17_Chr4g0054571 | 37.952 | 166 | 85 | 5 | 223 | 370 | 161 | 326 | 4.62e-16 | 78.6 |
| Msa0586680 | MtrunA17_Chr4g0054571 | 35.811 | 148 | 77 | 5 | 57 | 186 | 161 | 308 | 6.85e-12 | 65.9 |
| Msa0586680 | MtrunA17_Chr7g0225901 | 36.090 | 133 | 61 | 4 | 71 | 186 | 114 | 239 | 1.19e-15 | 76.3 |
| Msa0586680 | MtrunA17_Chr7g0225901 | 35.036 | 137 | 65 | 4 | 234 | 353 | 111 | 240 | 2.82e-14 | 72.0 |
| Msa0586680 | MtrunA17_Chr6g0468461 | 29.825 | 171 | 84 | 4 | 45 | 186 | 147 | 310 | 1.97e-12 | 67.8 |
| Msa0586680 | MtrunA17_Chr6g0468461 | 32.867 | 143 | 83 | 3 | 234 | 373 | 196 | 328 | 1.69e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0586680 | AT4G37850.2 | 40.244 | 164 | 84 | 5 | 223 | 373 | 163 | 325 | 8.60e-24 | 100 |
| Msa0586680 | AT4G37850.2 | 40.972 | 144 | 71 | 5 | 57 | 187 | 163 | 305 | 1.45e-21 | 94.7 |
| Msa0586680 | AT4G37850.1 | 40.244 | 164 | 84 | 5 | 223 | 373 | 163 | 325 | 8.60e-24 | 100 |
| Msa0586680 | AT4G37850.1 | 40.972 | 144 | 71 | 5 | 57 | 187 | 163 | 305 | 1.45e-21 | 94.7 |
| Msa0586680 | AT2G22770.1 | 35.556 | 180 | 86 | 4 | 222 | 373 | 142 | 319 | 3.53e-21 | 93.6 |
| Msa0586680 | AT2G22770.1 | 35.032 | 157 | 76 | 3 | 56 | 186 | 142 | 298 | 9.93e-16 | 77.8 |
| Msa0586680 | AT2G22760.1 | 36.364 | 165 | 90 | 6 | 223 | 372 | 130 | 294 | 5.16e-21 | 92.4 |
| Msa0586680 | AT2G22760.1 | 38.462 | 130 | 67 | 3 | 70 | 186 | 144 | 273 | 5.07e-19 | 87.0 |
| Msa0586680 | AT2G22760.2 | 37.681 | 138 | 73 | 3 | 70 | 194 | 144 | 281 | 3.60e-20 | 90.1 |
| Msa0586680 | AT2G22760.2 | 37.241 | 145 | 77 | 5 | 223 | 353 | 130 | 274 | 3.43e-17 | 81.3 |
| Msa0586680 | AT2G22750.2 | 34.731 | 167 | 92 | 4 | 223 | 373 | 137 | 302 | 1.52e-15 | 77.0 |
| Msa0586680 | AT2G22750.2 | 36.054 | 147 | 77 | 4 | 57 | 187 | 137 | 282 | 1.15e-12 | 68.6 |
| Msa0586680 | AT2G22750.3 | 34.731 | 167 | 92 | 4 | 223 | 373 | 165 | 330 | 1.71e-15 | 77.0 |
| Msa0586680 | AT2G22750.3 | 36.054 | 147 | 77 | 4 | 57 | 187 | 165 | 310 | 1.42e-12 | 68.6 |
| Msa0586680 | AT2G22750.5 | 34.731 | 167 | 92 | 4 | 223 | 373 | 161 | 326 | 1.99e-15 | 77.0 |
| Msa0586680 | AT2G22750.5 | 36.054 | 147 | 77 | 4 | 57 | 187 | 161 | 306 | 1.59e-12 | 68.2 |
| Msa0586680 | AT2G22750.1 | 34.731 | 167 | 91 | 5 | 223 | 373 | 137 | 301 | 3.07e-14 | 73.2 |
| Msa0586680 | AT2G22750.1 | 36.301 | 146 | 76 | 4 | 57 | 186 | 137 | 281 | 1.29e-12 | 68.2 |
| Msa0586680 | AT2G22750.4 | 34.731 | 167 | 91 | 5 | 223 | 373 | 165 | 329 | 3.64e-14 | 73.2 |
| Msa0586680 | AT2G22750.4 | 36.301 | 146 | 76 | 4 | 57 | 186 | 165 | 309 | 1.81e-12 | 68.2 |
Find 72 sgRNAs with CRISPR-Local
Find 543 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAGTAGTGTCTTGCAATT+TGG | 0.242766 | 4_2:+7969461 | Msa0586680:CDS |
| AATAGTAGTGTCTTGCAATT+TGG | 0.242766 | 4_2:+7976931 | Msa0586680:CDS |
| ATTACCTTACATAATATTCT+TGG | 0.253091 | 4_2:+7966231 | Msa0586680:five_prime_UTR |
| TTGGCCTTCTAATTCTGATT+TGG | 0.292992 | 4_2:+7966317 | Msa0586680:CDS |
| CTATTATATAACGTTAGTTT+TGG | 0.314460 | 4_2:-7966255 | None:intergenic |
| GAGAAGGGTGGTTGAGGTTG+TGG | 0.332790 | 4_2:-7966129 | None:intergenic |
| GTCCATTGTGAGAAACAAAA+TGG | 0.346102 | 4_2:+7976856 | Msa0586680:CDS |
| TTTACCAAATCAGAATTAGA+AGG | 0.359501 | 4_2:-7966321 | None:intergenic |
| GACACTCTTGCTTTGACCTC+TGG | 0.373738 | 4_2:-7976811 | None:intergenic |
| AAGGAACTTTCAGATGTCAT+AGG | 0.393216 | 4_2:+7975185 | Msa0586680:CDS |
| TGGAGGAGTCGGGAGAAAAT+TGG | 0.405975 | 4_2:+7966298 | Msa0586680:CDS |
| CACAAAATTAATGGAGGAGT+CGG | 0.417820 | 4_2:+7966287 | Msa0586680:exon |
| ACGAACCTTCTTTAAGCCTA+TGG | 0.424699 | 4_2:-7966613 | None:intergenic |
| GTCCAATGTGAGGAACAAAA+TGG | 0.442895 | 4_2:+7969386 | Msa0586680:CDS |
| TGTGATGATGAGGATCAAAT+TGG | 0.444244 | 4_2:+7975107 | Msa0586680:CDS |
| TGGTCCAAGAATATTATGTA+AGG | 0.448009 | 4_2:-7966235 | None:intergenic |
| AAACAAGAGAAGGGTGGTTG+AGG | 0.454672 | 4_2:-7966135 | None:intergenic |
| GACACTCTTGCTTTAACCTC+TGG | 0.454730 | 4_2:-7969341 | None:intergenic |
| GATGGACGACACTTCGATCC+TGG | 0.456139 | 4_2:+7976648 | Msa0586680:intron |
| CATAGTCTTTAGCTTTCTCC+AGG | 0.461758 | 4_2:-7976666 | None:intergenic |
| ATTATGTACCTTAGCAATGA+TGG | 0.465279 | 4_2:-7976974 | None:intergenic |
| AGATTCTCCATCTTTAAGAA+TGG | 0.468345 | 4_2:-7966469 | None:intergenic |
| CCAACATTTGTACTAACAAA+AGG | 0.472387 | 4_2:+7969267 | Msa0586680:CDS |
| CAAACATTTGTAGCAACAAA+AGG | 0.474862 | 4_2:+7976737 | Msa0586680:CDS |
| GAAAAGAAGAAAACAAGAGA+AGG | 0.477030 | 4_2:-7966145 | None:intergenic |
| GCATCCCTTTGTATCATCTG+TGG | 0.493551 | 4_2:-7975135 | None:intergenic |
| GTACTCATCTGAATTCACTT+TGG | 0.493682 | 4_2:-7976761 | None:intergenic |
| CATCCCTTTGTATCATCTGT+GGG | 0.500625 | 4_2:-7975134 | None:intergenic |
| TGAGGAACAAAATGGTATCC+TGG | 0.505887 | 4_2:+7969394 | Msa0586680:CDS |
| GATGAAGCCATTCTTAAAGA+TGG | 0.508496 | 4_2:+7966462 | Msa0586680:CDS |
| ACAAAATTAATGGAGGAGTC+GGG | 0.511241 | 4_2:+7966288 | Msa0586680:exon |
| GTAGTAATTTGAACTCACTT+TGG | 0.517586 | 4_2:-7969291 | None:intergenic |
| AGACGCCATAGGCTTAAAGA+AGG | 0.520059 | 4_2:+7966608 | Msa0586680:CDS |
| AGATGTCATAGGCTTAAAGA+AGG | 0.521799 | 4_2:+7975196 | Msa0586680:CDS |
| GGAGATCACAGAGATGTTGA+AGG | 0.529175 | 4_2:+7966578 | Msa0586680:CDS |
| AGAGAGCTAGAACAAGTAGC+TGG | 0.532657 | 4_2:+7976712 | Msa0586680:CDS |
| AAAAGAAGAAAACAAGAGAA+GGG | 0.535404 | 4_2:-7966144 | None:intergenic |
| GGAGATAACAGAGAGATTGA+AGG | 0.538887 | 4_2:+7975166 | Msa0586680:CDS |
| AGAGAGCTAGAACAAGAAGC+TGG | 0.540149 | 4_2:+7969242 | Msa0586680:CDS |
| AGTTCAAATTACTACAATTG+TGG | 0.544671 | 4_2:+7969299 | Msa0586680:CDS |
| AAGGAACTTTCAGACGCCAT+AGG | 0.546154 | 4_2:+7966597 | Msa0586680:CDS |
| TATACAATGCAGATGGGTGA+TGG | 0.560778 | 4_2:+7977499 | Msa0586680:intron |
| GGAGAAAGCTAAAGACTATG+TGG | 0.566262 | 4_2:+7976669 | Msa0586680:CDS |
| TACAAAGGAAAATAATGAGA+AGG | 0.566751 | 4_2:+7966557 | Msa0586680:CDS |
| AAGGGTGGTTGAGGTTGTGG+AGG | 0.572193 | 4_2:-7966126 | None:intergenic |
| AATTCAGATGAGTACAATTG+TGG | 0.580271 | 4_2:+7976769 | Msa0586680:CDS |
| GAAAGTATAGTGTGGATAAG+TGG | 0.585411 | 4_2:-7966187 | None:intergenic |
| GAAACTATGAAAGTATAGTG+TGG | 0.589397 | 4_2:-7966195 | None:intergenic |
| ATTAGTGAAAACTCTGAGAA+TGG | 0.589791 | 4_2:+7977543 | Msa0586680:CDS |
| AAGATGAAGATTTGCAAGGT+GGG | 0.590601 | 4_2:-7976899 | None:intergenic |
| GATCCCACAGATGATACAAA+GGG | 0.591275 | 4_2:+7975131 | Msa0586680:CDS |
| TGACATCACCATCATTGCTA+AGG | 0.597498 | 4_2:+7976966 | Msa0586680:CDS |
| TGACATCACCATCGTTGCCA+AGG | 0.604175 | 4_2:+7969496 | Msa0586680:CDS |
| TACAAAGGGATGCAATGAGA+AGG | 0.614231 | 4_2:+7975145 | Msa0586680:CDS |
| TGGCAACGATGGTGATGTCA+AGG | 0.614449 | 4_2:-7969493 | None:intergenic |
| CTGAAAGATGAAGATTTGCA+AGG | 0.619476 | 4_2:-7976903 | None:intergenic |
| AGAAGAAAACAAGAGAAGGG+TGG | 0.625567 | 4_2:-7966141 | None:intergenic |
| AGATCCCACAGATGATACAA+AGG | 0.632403 | 4_2:+7975130 | Msa0586680:CDS |
| TGAATCTGTGTGTGATGATG+AGG | 0.633660 | 4_2:+7975097 | Msa0586680:CDS |
| TATTATGTAAGGTAATTGTG+TGG | 0.636240 | 4_2:-7966224 | None:intergenic |
| ATCTGTATGTGATGATGATG+AGG | 0.647394 | 4_2:+7966494 | Msa0586680:CDS |
| AAAGATGAAGATTTGCAAGG+TGG | 0.649158 | 4_2:-7976900 | None:intergenic |
| TAGCAATGATGGTGATGTCA+AGG | 0.650596 | 4_2:-7976963 | None:intergenic |
| AAGTGATATTACTCTTCCAG+AGG | 0.654563 | 4_2:+7969325 | Msa0586680:CDS |
| AATGATGGTGATGTCAAGGA+TGG | 0.654787 | 4_2:-7976959 | None:intergenic |
| GAGTAATATAATGAGTACGA+TGG | 0.660552 | 4_2:-7966102 | None:intergenic |
| GGCAACGATGGTGATGTCAA+GGG | 0.669209 | 4_2:-7969492 | None:intergenic |
| TATATGTACCTTGGCAACGA+TGG | 0.684253 | 4_2:-7969504 | None:intergenic |
| AAGTGATAATACTCTTCCAG+AGG | 0.687795 | 4_2:+7976795 | Msa0586680:CDS |
| AGATCCCACAGATAATACAA+AGG | 0.692675 | 4_2:+7966542 | Msa0586680:CDS |
| TCTTGTCATAGTCCAATGTG+AGG | 0.694778 | 4_2:+7969376 | Msa0586680:CDS |
| AACGATGGTGATGTCAAGGG+TGG | 0.703274 | 4_2:-7969489 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTATAATAATATAATA+TGG | + | chr4_2:7972920-7972939 | Msa0586680:intron | 0.0% |
| !! | ATCATATGTATTATATTAAT+AGG | - | chr4_2:7966366-7966385 | None:intergenic | 10.0% |
| !!! | ATGTTTACTATATTTAATTT+AGG | - | chr4_2:7966667-7966686 | None:intergenic | 10.0% |
| !! | CATATTTATATTTAAATGAA+CGG | + | chr4_2:7966684-7966703 | Msa0586680:intron | 10.0% |
| !!! | TAATTTTTTTAGTATAAAGA+AGG | - | chr4_2:7966816-7966835 | None:intergenic | 10.0% |
| !!! | TTATTATTTTTTTTAAAACC+AGG | + | chr4_2:7967643-7967662 | Msa0586680:intron | 10.0% |
| !!! | TATTAAGATTATGTTTTTTA+TGG | + | chr4_2:7967704-7967723 | Msa0586680:intron | 10.0% |
| !!! | ATTAAGATTATGTTTTTTAT+GGG | + | chr4_2:7967705-7967724 | Msa0586680:intron | 10.0% |
| !!! | TAATTTTGTAACAAAAAATT+CGG | + | chr4_2:7967761-7967780 | Msa0586680:intron | 10.0% |
| !! | TTTCATTAATTTATAATTTG+TGG | + | chr4_2:7968332-7968351 | Msa0586680:intron | 10.0% |
| !!! | TTCATTAATTTATAATTTGT+GGG | + | chr4_2:7968333-7968352 | Msa0586680:intron | 10.0% |
| !! | TTCTGAATAATTATATAAAA+AGG | + | chr4_2:7968974-7968993 | Msa0586680:intron | 10.0% |
| !! | TATATGCATTATAAATAATA+GGG | + | chr4_2:7969116-7969135 | Msa0586680:intron | 10.0% |
| !! | ATTATAATGTAAATCTAAAA+TGG | + | chr4_2:7969882-7969901 | Msa0586680:intron | 10.0% |
| !! | TAATTAATATTTATGAACAA+AGG | - | chr4_2:7970212-7970231 | None:intergenic | 10.0% |
| !! | TACATAATAAAATTTATTCA+TGG | + | chr4_2:7972158-7972177 | Msa0586680:intron | 10.0% |
| !! | TATAAAAATAATTAGTATCA+TGG | + | chr4_2:7972373-7972392 | Msa0586680:intron | 10.0% |
| !! | GAATAATATTAATGATATAA+CGG | + | chr4_2:7973451-7973470 | Msa0586680:intron | 10.0% |
| !! | ACATATTACAAATTAAATTT+AGG | + | chr4_2:7975249-7975268 | Msa0586680:intron | 10.0% |
| !! | AAAATTAAAGAGAAAATAAA+TGG | - | chr4_2:7975696-7975715 | None:intergenic | 10.0% |
| !! | TATATATGTATGTATTTATA+TGG | + | chr4_2:7976495-7976514 | Msa0586680:intron | 10.0% |
| !!! | TAAATTCTAAATATGAATTT+TGG | - | chr4_2:7977007-7977026 | None:intergenic | 10.0% |
| !! | ATTAAATAGTAAAAATTCAA+GGG | - | chr4_2:7977409-7977428 | None:intergenic | 10.0% |
| !! | AATTAAATAGTAAAAATTCA+AGG | - | chr4_2:7977410-7977429 | None:intergenic | 10.0% |
| !!! | CATAATTTTCACAAAATTAA+TGG | + | chr4_2:7966278-7966297 | Msa0586680:exon | 15.0% |
| !! | CTTAACGAAATTAATAAATA+AGG | - | chr4_2:7967209-7967228 | None:intergenic | 15.0% |
| !!! | TATTTAAATTTGTTACAAAC+AGG | + | chr4_2:7967556-7967575 | Msa0586680:intron | 15.0% |
| !!! | ATTTAAATTTGTTACAAACA+GGG | + | chr4_2:7967557-7967576 | Msa0586680:intron | 15.0% |
| !! | AACAAAACCTAAAAAAATTA+GGG | - | chr4_2:7967915-7967934 | None:intergenic | 15.0% |
| !! | TAACAAAACCTAAAAAAATT+AGG | - | chr4_2:7967916-7967935 | None:intergenic | 15.0% |
| !!! | ATAATTATGTTAGTTGTTTT+GGG | + | chr4_2:7968122-7968141 | Msa0586680:intron | 15.0% |
| !!! | TCATTAATTTATAATTTGTG+GGG | + | chr4_2:7968334-7968353 | Msa0586680:intron | 15.0% |
| !! | ATGACATTAAAATTATAAGT+TGG | + | chr4_2:7968466-7968485 | Msa0586680:intron | 15.0% |
| !! | TGACATTAAAATTATAAGTT+GGG | + | chr4_2:7968467-7968486 | Msa0586680:intron | 15.0% |
| !!! | TTCTTTTATTATCTATGTAA+TGG | + | chr4_2:7968643-7968662 | Msa0586680:intron | 15.0% |
| !!! | TCCAATTAATTTTTTGAAAA+GGG | - | chr4_2:7968777-7968796 | None:intergenic | 15.0% |
| !!! | ATCCAATTAATTTTTTGAAA+AGG | - | chr4_2:7968778-7968797 | None:intergenic | 15.0% |
| !! | GTATATGCATTATAAATAAT+AGG | + | chr4_2:7969115-7969134 | Msa0586680:intron | 15.0% |
| !! | ATTAATATGTCAATGTAATT+TGG | + | chr4_2:7969944-7969963 | Msa0586680:intron | 15.0% |
| !!! | ATGGAATAAGATTTTTATAA+TGG | - | chr4_2:7970041-7970060 | None:intergenic | 15.0% |
| !! | AACAAAAAATCAATCTAAAA+TGG | - | chr4_2:7970060-7970079 | None:intergenic | 15.0% |
| !! | TAATTATAGATCTAAGAATT+AGG | + | chr4_2:7970675-7970694 | Msa0586680:intron | 15.0% |
| !!! | ATTCTAAACATATTTTCATT+CGG | + | chr4_2:7970854-7970873 | Msa0586680:intron | 15.0% |
| !! | TTATTATGTAAAAAGGAAAA+AGG | - | chr4_2:7972148-7972167 | None:intergenic | 15.0% |
| !!! | ATTTTCATAACAAATGAATT+GGG | - | chr4_2:7972274-7972293 | None:intergenic | 15.0% |
| !!! | TATTTTCATAACAAATGAAT+TGG | - | chr4_2:7972275-7972294 | None:intergenic | 15.0% |
| !!! | TTTTATATTTAGTTGGAATT+GGG | - | chr4_2:7972360-7972379 | None:intergenic | 15.0% |
| !!! | TTTTTATATTTAGTTGGAAT+TGG | - | chr4_2:7972361-7972380 | None:intergenic | 15.0% |
| !!! | TTTTTGTTGTGAATAATAAT+AGG | - | chr4_2:7972696-7972715 | None:intergenic | 15.0% |
| !!! | ACAAAAATCTCTATTTTTTT+TGG | + | chr4_2:7972709-7972728 | Msa0586680:intron | 15.0% |
| !!! | TAAATATTAGGCTTTTTTAA+GGG | - | chr4_2:7972847-7972866 | None:intergenic | 15.0% |
| !!! | ATAAATATTAGGCTTTTTTA+AGG | - | chr4_2:7972848-7972867 | None:intergenic | 15.0% |
| !! | TAAAACTATGAATTATTGAA+CGG | + | chr4_2:7973396-7973415 | Msa0586680:intron | 15.0% |
| !! | TTGGTAAATATATTTAGTTA+TGG | + | chr4_2:7973710-7973729 | Msa0586680:intron | 15.0% |
| !!! | ACTTTTTCTTTGTAAATTTA+TGG | - | chr4_2:7974321-7974340 | None:intergenic | 15.0% |
| !! | TAAATTTACAAAGAAAAAGT+AGG | + | chr4_2:7974321-7974340 | Msa0586680:intron | 15.0% |
| !!! | CATAATTTTCACAAAATTAA+TGG | + | chr4_2:7966278-7966297 | Msa0586680:exon | 15.0% |
| !! | TAGCATATGTATTAAATAAT+AGG | - | chr4_2:7974960-7974979 | None:intergenic | 15.0% |
| !! | AGTATATAATACTAAATGAA+TGG | + | chr4_2:7975272-7975291 | Msa0586680:intron | 15.0% |
| !! | TCAACAAAAAATAATGTATT+TGG | + | chr4_2:7975535-7975554 | Msa0586680:intron | 15.0% |
| !!! | TTCTAAAATGTAAGTAAAAA+TGG | - | chr4_2:7975598-7975617 | None:intergenic | 15.0% |
| !! | TACTTAATTAAGTTTACTTA+TGG | + | chr4_2:7975627-7975646 | Msa0586680:intron | 15.0% |
| !!! | ATTTTTCGAAAATTCAATAA+TGG | + | chr4_2:7976094-7976113 | Msa0586680:intron | 15.0% |
| !! | TTTGTAAAAAATAAAGAAGT+AGG | + | chr4_2:7976199-7976218 | Msa0586680:intron | 15.0% |
| !! | TTGTAAAAAATAAAGAAGTA+GGG | + | chr4_2:7976200-7976219 | Msa0586680:intron | 15.0% |
| !!! | ATATCTAACATTTTTTCTAA+CGG | - | chr4_2:7977172-7977191 | None:intergenic | 15.0% |
| !! | TTAGAAAAAATGTTAGATAT+AGG | + | chr4_2:7977172-7977191 | Msa0586680:intron | 15.0% |
| !! | TAGAAAAAATGTTAGATATA+GGG | + | chr4_2:7977173-7977192 | Msa0586680:intron | 15.0% |
| !!! | TTACTAAAATATCTGAATTT+TGG | + | chr4_2:7977213-7977232 | Msa0586680:intron | 15.0% |
| !! | ATTACCTTACATAATATTCT+TGG | + | chr4_2:7966231-7966250 | Msa0586680:five_prime_UTR | 20.0% |
| !!! | CTATTATATAACGTTAGTTT+TGG | - | chr4_2:7966258-7966277 | None:intergenic | 20.0% |
| !!! | AATTTTCACAAAATTAATGG+AGG | + | chr4_2:7966281-7966300 | Msa0586680:exon | 20.0% |
| !!! | TGTTTTTTGCATTTATTCAT+AGG | + | chr4_2:7966431-7966450 | Msa0586680:intron | 20.0% |
| !!! | TTAAATTTAACTTAAGAGTG+TGG | + | chr4_2:7967126-7967145 | Msa0586680:intron | 20.0% |
| !!! | AAATTTAGAGCCAAAATTTT+AGG | - | chr4_2:7967297-7967316 | None:intergenic | 20.0% |
| !! | TAACTTTCAAAAATAGTGTT+TGG | - | chr4_2:7967435-7967454 | None:intergenic | 20.0% |
| !!! | TTTAGATTTTTTTTAGATCC+TGG | - | chr4_2:7967664-7967683 | None:intergenic | 20.0% |
| !!! | AATTAACTAGTTTTTTTACC+CGG | - | chr4_2:7967843-7967862 | None:intergenic | 20.0% |
| !!! | AAAAAATTAGGGTTAGTATT+AGG | - | chr4_2:7967904-7967923 | None:intergenic | 20.0% |
| !!! | ATACTAACCCTAATTTTTTT+AGG | + | chr4_2:7967905-7967924 | Msa0586680:intron | 20.0% |
| !!! | TTGCTTGTTAAAATATTTGA+GGG | - | chr4_2:7967958-7967977 | None:intergenic | 20.0% |
| !! | TACCATCAATCTAATTTATT+CGG | + | chr4_2:7968097-7968116 | Msa0586680:intron | 20.0% |
| !! | CAAAACAACTAACATAATTA+TGG | - | chr4_2:7968123-7968142 | None:intergenic | 20.0% |
| !!! | CATAATTATGTTAGTTGTTT+TGG | + | chr4_2:7968121-7968140 | Msa0586680:intron | 20.0% |
| !!! | TTTTTTAACGAAAGAGATTT+TGG | - | chr4_2:7968368-7968387 | None:intergenic | 20.0% |
| !! | TCTCTTTCGTTAAAAAATTA+TGG | + | chr4_2:7968371-7968390 | Msa0586680:intron | 20.0% |
| !! | AAAGAATTAAGAACATACAA+TGG | - | chr4_2:7968629-7968648 | None:intergenic | 20.0% |
| !!! | TCCCTTTTCAAAAAATTAAT+TGG | + | chr4_2:7968773-7968792 | Msa0586680:intron | 20.0% |
| !!! | TGACAATGATTTTTTTTCAT+TGG | - | chr4_2:7968865-7968884 | None:intergenic | 20.0% |
| !! | AATGAAAAAAAATCATTGTC+AGG | + | chr4_2:7968864-7968883 | Msa0586680:intron | 20.0% |
| !! | ATGAAAAAAAATCATTGTCA+GGG | + | chr4_2:7968865-7968884 | Msa0586680:intron | 20.0% |
| !!! | TATATTAATTTGTCAACGTA+AGG | + | chr4_2:7969850-7969869 | Msa0586680:intron | 20.0% |
| !! | CACAAAAAATCAATCTAAAA+TGG | + | chr4_2:7969987-7970006 | Msa0586680:intron | 20.0% |
| !!! | TAATTAATTTCTTATTGGCT+AGG | + | chr4_2:7970226-7970245 | Msa0586680:intron | 20.0% |
| !!! | AATTAATTTCTTATTGGCTA+GGG | + | chr4_2:7970227-7970246 | Msa0586680:intron | 20.0% |
| !! | AAATACATGATAAAATGTCA+AGG | - | chr4_2:7970284-7970303 | None:intergenic | 20.0% |
| !! | AAAAAATTAAATTCTGCAGA+TGG | + | chr4_2:7970349-7970368 | Msa0586680:intron | 20.0% |
| !!! | CATTTTGCAATTATATTTCT+TGG | + | chr4_2:7970789-7970808 | Msa0586680:intron | 20.0% |
| !!! | AAATATGTTTAGAATTCAGT+AGG | - | chr4_2:7970849-7970868 | None:intergenic | 20.0% |
| !! | CATTATTAACATGAAATAAG+TGG | + | chr4_2:7970952-7970971 | Msa0586680:intron | 20.0% |
| !!! | TTTTAGAAGAAGTTCATAAA+AGG | + | chr4_2:7971570-7971589 | Msa0586680:intron | 20.0% |
| !! | TTTAGAAGAAGTTCATAAAA+GGG | + | chr4_2:7971571-7971590 | Msa0586680:intron | 20.0% |
| !! | AACATGTTAAATGAATCAAT+TGG | + | chr4_2:7971730-7971749 | Msa0586680:intron | 20.0% |
| !!! | GAAAAAGTATATTAAGCTAT+GGG | - | chr4_2:7972101-7972120 | None:intergenic | 20.0% |
| !!! | AGAAAAAGTATATTAAGCTA+TGG | - | chr4_2:7972102-7972121 | None:intergenic | 20.0% |
| !!! | ACTAAACATCAAGATTTTTT+TGG | - | chr4_2:7972764-7972783 | None:intergenic | 20.0% |
| !!! | AAATATTAGGCTTTTTTAAG+GGG | - | chr4_2:7972846-7972865 | None:intergenic | 20.0% |
| !! | GAATTTATCCAATTTATTTG+AGG | - | chr4_2:7972990-7973009 | None:intergenic | 20.0% |
| !! | TAATGAAAATATTCGAAGTA+GGG | - | chr4_2:7973047-7973066 | None:intergenic | 20.0% |
| !! | TTAATGAAAATATTCGAAGT+AGG | - | chr4_2:7973048-7973067 | None:intergenic | 20.0% |
| !! | TAATATTAATGATATAACGG+TGG | + | chr4_2:7973454-7973473 | Msa0586680:intron | 20.0% |
| !!! | AACTGTACTTTTTTTTTTGA+CGG | + | chr4_2:7973533-7973552 | Msa0586680:intron | 20.0% |
| !!! | ACTCATTAATTATTTTTGAG+AGG | - | chr4_2:7973651-7973670 | None:intergenic | 20.0% |
| !! | ATAAAAAAAACCTAAAACGT+TGG | + | chr4_2:7973691-7973710 | Msa0586680:intron | 20.0% |
| !!! | AATATATTTACCAACGTTTT+AGG | - | chr4_2:7973704-7973723 | None:intergenic | 20.0% |
| !! | AATAATAAGAGCAGATAAAT+AGG | - | chr4_2:7973777-7973796 | None:intergenic | 20.0% |
| !! | ACATATTAAGAAACCAATTA+AGG | + | chr4_2:7973817-7973836 | Msa0586680:intron | 20.0% |
| !! | TGAAATAATTCTACCTTAAT+TGG | - | chr4_2:7973833-7973852 | None:intergenic | 20.0% |
| !!! | TTTTTTTATATACTCTCATG+AGG | - | chr4_2:7973872-7973891 | None:intergenic | 20.0% |
| !! | TCAATCTTAACTAATTAAGT+TGG | + | chr4_2:7974104-7974123 | Msa0586680:intron | 20.0% |
| !!! | TTCTATATTCCTTTTTTTAG+GGG | - | chr4_2:7974141-7974160 | None:intergenic | 20.0% |
| !!! | GTTCTATATTCCTTTTTTTA+GGG | - | chr4_2:7974142-7974161 | None:intergenic | 20.0% |
| !!! | TGTTCTATATTCCTTTTTTT+AGG | - | chr4_2:7974143-7974162 | None:intergenic | 20.0% |
| !! | AAACACCTTATAAAAAATTG+AGG | + | chr4_2:7974252-7974271 | Msa0586680:intron | 20.0% |
| !!! | TGTTATTTGAATAACCATTT+GGG | + | chr4_2:7974277-7974296 | Msa0586680:intron | 20.0% |
| !! | TCACAAAAATTGTTACAAAA+TGG | + | chr4_2:7974414-7974433 | Msa0586680:intron | 20.0% |
| !!! | AGTCTTTCTAAAAAAGTAAT+TGG | + | chr4_2:7974586-7974605 | Msa0586680:intron | 20.0% |
| !!! | GTCTTTCTAAAAAAGTAATT+GGG | + | chr4_2:7974587-7974606 | Msa0586680:intron | 20.0% |
| !! | TACCTTACATATATATTTCT+TGG | + | chr4_2:7974836-7974855 | Msa0586680:intron | 20.0% |
| !!! | AATTTTCACAAAATTAATGG+AGG | + | chr4_2:7966281-7966300 | Msa0586680:exon | 20.0% |
| !! | AAATAATAGGTTATTGCAAT+TGG | - | chr4_2:7974947-7974966 | None:intergenic | 20.0% |
| !!! | TGTTGTTTTCATTTATACAT+AGG | + | chr4_2:7975037-7975056 | Msa0586680:intron | 20.0% |
| !! | TGTTTGAGGAAAAATATAAA+AGG | + | chr4_2:7975407-7975426 | Msa0586680:intron | 20.0% |
| !! | TCAACATAAATTGATGTATT+CGG | - | chr4_2:7975574-7975593 | None:intergenic | 20.0% |
| !! | TTAATATGATTGAGAGTAAA+TGG | + | chr4_2:7975922-7975941 | Msa0586680:intron | 20.0% |
| !! | TGGAAAAAAAAAAAAAACTG+AGG | + | chr4_2:7976114-7976133 | Msa0586680:intron | 20.0% |
| !! | TAGACAAATTAAAATGGAAA+TGG | - | chr4_2:7976144-7976163 | None:intergenic | 20.0% |
| !!! | ATTTCCATTTTAATTTGTCT+AGG | + | chr4_2:7976143-7976162 | Msa0586680:intron | 20.0% |
| !!! | GATAGTACATTTTTAAATTG+CGG | - | chr4_2:7977112-7977131 | None:intergenic | 20.0% |
| !! | TAAAAATACATCTACACATT+CGG | - | chr4_2:7977620-7977639 | None:intergenic | 20.0% |
| ! | AAAAGAAGAAAACAAGAGAA+GGG | - | chr4_2:7966147-7966166 | None:intergenic | 25.0% |
| ! | TATTATGTAAGGTAATTGTG+TGG | - | chr4_2:7966227-7966246 | None:intergenic | 25.0% |
| ! | TTTACCAAATCAGAATTAGA+AGG | - | chr4_2:7966324-7966343 | None:intergenic | 25.0% |
| !! | TTTTCCTTTGTATTATCTGT+GGG | - | chr4_2:7966549-7966568 | None:intergenic | 25.0% |
| !! | ATTTTCCTTTGTATTATCTG+TGG | - | chr4_2:7966550-7966569 | None:intergenic | 25.0% |
| ! | TACAAAGGAAAATAATGAGA+AGG | + | chr4_2:7966557-7966576 | Msa0586680:CDS | 25.0% |
| !!! | TTTTTTAGTATAAAGAAGGC+TGG | - | chr4_2:7966812-7966831 | None:intergenic | 25.0% |
| !! | ACAACTCAATCCTAAAATTT+TGG | + | chr4_2:7967284-7967303 | Msa0586680:intron | 25.0% |
| !!! | ATTTTAGAGCCAAGATTTTA+GGG | - | chr4_2:7967344-7967363 | None:intergenic | 25.0% |
| !!! | AATTTTAGAGCCAAGATTTT+AGG | - | chr4_2:7967345-7967364 | None:intergenic | 25.0% |
| !!! | TGGTAGTATGAATTTTTTAG+TGG | - | chr4_2:7967415-7967434 | None:intergenic | 25.0% |
| ! | TTGACATTCAAAAATCATAC+TGG | - | chr4_2:7967462-7967481 | None:intergenic | 25.0% |
| !!! | AAGATTATGTTTTTTATGGG+AGG | + | chr4_2:7967708-7967727 | Msa0586680:intron | 25.0% |
| !!! | AGATTATGTTTTTTATGGGA+GGG | + | chr4_2:7967709-7967728 | Msa0586680:intron | 25.0% |
| ! | CTTAATTATATGTCTAACCT+GGG | + | chr4_2:7967812-7967831 | Msa0586680:intron | 25.0% |
| !! | GTTGCTTGTTAAAATATTTG+AGG | - | chr4_2:7967959-7967978 | None:intergenic | 25.0% |
| !! | AAGCAACAAATTTTACTACT+AGG | + | chr4_2:7967972-7967991 | Msa0586680:intron | 25.0% |
| !! | AACAAATTTTACTACTAGGA+TGG | + | chr4_2:7967976-7967995 | Msa0586680:intron | 25.0% |
| !! | ACAAATTTTACTACTAGGAT+GGG | + | chr4_2:7967977-7967996 | Msa0586680:intron | 25.0% |
| ! | TTGACGTATGATAATTTACA+AGG | + | chr4_2:7968198-7968217 | Msa0586680:intron | 25.0% |
| ! | TGAAAAAAAATCATTGTCAG+GGG | + | chr4_2:7968866-7968885 | Msa0586680:intron | 25.0% |
| !! | GTTGGTTCATTATATTCTAA+AGG | + | chr4_2:7968891-7968910 | Msa0586680:intron | 25.0% |
| ! | TCTCTATATAAATGTGTAGA+TGG | + | chr4_2:7969160-7969179 | Msa0586680:intron | 25.0% |
| ! | AGTTCAAATTACTACAATTG+TGG | + | chr4_2:7969299-7969318 | Msa0586680:CDS | 25.0% |
| ! | CATATATTGTATATGTACCT+TGG | - | chr4_2:7969516-7969535 | None:intergenic | 25.0% |
| ! | TGAAGATCATAATTGATTGA+TGG | - | chr4_2:7969586-7969605 | None:intergenic | 25.0% |
| !! | TGTGTGTAGTTCATTTTATA+AGG | - | chr4_2:7969742-7969761 | None:intergenic | 25.0% |
| ! | TTGGAATGAATGAATATGTT+TGG | + | chr4_2:7970455-7970474 | Msa0586680:intron | 25.0% |
| ! | GGTACTTAAGAGTTAATTAT+AGG | + | chr4_2:7970638-7970657 | Msa0586680:intron | 25.0% |
| ! | TTGCAAAGTTATTGAAAATC+TGG | - | chr4_2:7970920-7970939 | None:intergenic | 25.0% |
| !! | AAGAATGTGTTGGTATTTAT+AGG | + | chr4_2:7971620-7971639 | Msa0586680:intron | 25.0% |
| !! | AGAATGTGTTGGTATTTATA+GGG | + | chr4_2:7971621-7971640 | Msa0586680:intron | 25.0% |
| ! | ATCAAGAAAGTTATCAAAGA+AGG | + | chr4_2:7971911-7971930 | Msa0586680:intron | 25.0% |
| ! | TGAAAATAAATTCATTTGCG+TGG | - | chr4_2:7972022-7972041 | None:intergenic | 25.0% |
| ! | GTAAAAAGGAAAAAGGTTTA+AGG | - | chr4_2:7972141-7972160 | None:intergenic | 25.0% |
| !! | TCAACTAAGAACTTCTTTTA+AGG | + | chr4_2:7972222-7972241 | Msa0586680:intron | 25.0% |
| ! | GAGATATTATCATTACGATT+TGG | - | chr4_2:7972413-7972432 | None:intergenic | 25.0% |
| ! | GTTTGGTAGATATTAAAAGA+AGG | - | chr4_2:7972515-7972534 | None:intergenic | 25.0% |
| !! | AATAAATGTAGCATTGAGTT+TGG | - | chr4_2:7972532-7972551 | None:intergenic | 25.0% |
| ! | TTTATCCAATTTATTTGAGG+TGG | - | chr4_2:7972987-7973006 | None:intergenic | 25.0% |
| ! | ATTGGATAAATTCAGTTAGT+TGG | + | chr4_2:7972997-7973016 | Msa0586680:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr4_2:7973189-7973208 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr4_2:7973202-7973221 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | + | chr4_2:7973201-7973220 | Msa0586680:intron | 25.0% |
| !!! | ATAATTCATAGTTTTACACG+TGG | - | chr4_2:7973392-7973411 | None:intergenic | 25.0% |
| !! | TTTTAAACTGTACTTGTCTT+TGG | + | chr4_2:7973561-7973580 | Msa0586680:intron | 25.0% |
| ! | GATAAGAATGCACTAAAATA+AGG | - | chr4_2:7973962-7973981 | None:intergenic | 25.0% |
| ! | TTCATATCTCATAGATATCT+AGG | - | chr4_2:7974064-7974083 | None:intergenic | 25.0% |
| ! | TATATACAACCCCTAAAAAA+AGG | + | chr4_2:7974129-7974148 | Msa0586680:intron | 25.0% |
| !!! | TCATCTCTAGTTTTTATGAA+TGG | + | chr4_2:7974163-7974182 | Msa0586680:intron | 25.0% |
| !!! | CATCTCTAGTTTTTATGAAT+GGG | + | chr4_2:7974164-7974183 | Msa0586680:intron | 25.0% |
| !!! | ATGAATGGGTATTTTAACAA+TGG | + | chr4_2:7974178-7974197 | Msa0586680:intron | 25.0% |
| !!! | ACACACCTCAATTTTTTATA+AGG | - | chr4_2:7974260-7974279 | None:intergenic | 25.0% |
| !!! | GTGTTATTTGAATAACCATT+TGG | + | chr4_2:7974276-7974295 | Msa0586680:intron | 25.0% |
| !!! | ACTCACTTATTTTTTTCAAG+AGG | - | chr4_2:7974454-7974473 | None:intergenic | 25.0% |
| ! | CCATAATTTCTAAACATAAG+TGG | - | chr4_2:7974514-7974533 | None:intergenic | 25.0% |
| ! | CCACTTATGTTTAGAAATTA+TGG | + | chr4_2:7974511-7974530 | Msa0586680:intron | 25.0% |
| ! | ATATATGTAAGGTAATTGTG+TGG | - | chr4_2:7974830-7974849 | None:intergenic | 25.0% |
| ! | TGCCAAGAAATATATATGTA+AGG | - | chr4_2:7974841-7974860 | None:intergenic | 25.0% |
| !!! | TAATGAAGTTTTGTTGTTTG+AGG | + | chr4_2:7975393-7975412 | Msa0586680:intron | 25.0% |
| ! | TGTGATCAAAACCAATATAT+AGG | - | chr4_2:7975660-7975679 | None:intergenic | 25.0% |
| ! | CTCTCAATCATATTAATGAA+CGG | - | chr4_2:7975918-7975937 | None:intergenic | 25.0% |
| ! | GAGAATTAACTTCAAATTCT+TGG | + | chr4_2:7975975-7975994 | Msa0586680:intron | 25.0% |
| !!! | TTTTTTTTCCATCCGAAAAT+AGG | - | chr4_2:7976056-7976075 | None:intergenic | 25.0% |
| ! | TCATAATTGAATAAGCACAT+GGG | - | chr4_2:7976253-7976272 | None:intergenic | 25.0% |
| ! | TTCATAATTGAATAAGCACA+TGG | - | chr4_2:7976254-7976273 | None:intergenic | 25.0% |
| ! | TTTAAGAGACTTGAAATTGA+AGG | + | chr4_2:7976275-7976294 | Msa0586680:intron | 25.0% |
| !!! | ATTTTAATGTATTGAACGTG+TGG | + | chr4_2:7976438-7976457 | Msa0586680:intron | 25.0% |
| ! | TTTCAATATGAACTTGTAGA+TGG | + | chr4_2:7976630-7976649 | Msa0586680:intron | 25.0% |
| ! | TATGATATATACAATGCAGA+TGG | + | chr4_2:7977492-7977511 | Msa0586680:intron | 25.0% |
| ! | ATGATATATACAATGCAGAT+GGG | + | chr4_2:7977493-7977512 | Msa0586680:intron | 25.0% |
| GAGTAATATAATGAGTACGA+TGG | - | chr4_2:7966105-7966124 | None:intergenic | 30.0% | |
| GAAAAGAAGAAAACAAGAGA+AGG | - | chr4_2:7966148-7966167 | None:intergenic | 30.0% | |
| ! | GAAACTATGAAAGTATAGTG+TGG | - | chr4_2:7966198-7966217 | None:intergenic | 30.0% |
| TGGTCCAAGAATATTATGTA+AGG | - | chr4_2:7966238-7966257 | None:intergenic | 30.0% | |
| ! | AGATTCTCCATCTTTAAGAA+TGG | - | chr4_2:7966472-7966491 | None:intergenic | 30.0% |
| !!! | GGATCATTATTTTGAAGATC+AGG | + | chr4_2:7966515-7966534 | Msa0586680:CDS | 30.0% |
| !!! | CATTATTTTGAAGATCAGGT+TGG | + | chr4_2:7966519-7966538 | Msa0586680:CDS | 30.0% |
| TTAAGAATTCGAAGTGACTT+AGG | + | chr4_2:7967024-7967043 | Msa0586680:intron | 30.0% | |
| ! | TTAAGAGTGTGGTTAAACAA+AGG | + | chr4_2:7967137-7967156 | Msa0586680:intron | 30.0% |
| ATTAGTGGAGGGAAAAAATT+AGG | - | chr4_2:7967247-7967266 | None:intergenic | 30.0% | |
| AGTTGTTGCAAACCTAATAA+GGG | - | chr4_2:7967270-7967289 | None:intergenic | 30.0% | |
| !!! | GATTATGTTTTTTATGGGAG+GGG | + | chr4_2:7967710-7967729 | Msa0586680:intron | 30.0% |
| !!! | ATTATGTTTTTTATGGGAGG+GGG | + | chr4_2:7967711-7967730 | Msa0586680:intron | 30.0% |
| CCAGGTTAGACATATAATTA+AGG | - | chr4_2:7967814-7967833 | None:intergenic | 30.0% | |
| CCTTAATTATATGTCTAACC+TGG | + | chr4_2:7967811-7967830 | Msa0586680:intron | 30.0% | |
| ! | AATTAGGGTTAGTATTAGGA+GGG | - | chr4_2:7967900-7967919 | None:intergenic | 30.0% |
| ! | AAATTAGGGTTAGTATTAGG+AGG | - | chr4_2:7967901-7967920 | None:intergenic | 30.0% |
| CATATTACTATAACAAGCAG+TGG | + | chr4_2:7968152-7968171 | Msa0586680:intron | 30.0% | |
| CTTATACACTACATTTGAAG+TGG | - | chr4_2:7968581-7968600 | None:intergenic | 30.0% | |
| CACTTCAAATGTAGTGTATA+AGG | + | chr4_2:7968579-7968598 | Msa0586680:intron | 30.0% | |
| ! | CCTTTTGTTAGTACAAATGT+TGG | - | chr4_2:7969270-7969289 | None:intergenic | 30.0% |
| CCAACATTTGTACTAACAAA+AGG | + | chr4_2:7969267-7969286 | Msa0586680:CDS | 30.0% | |
| GTAGTAATTTGAACTCACTT+TGG | - | chr4_2:7969294-7969313 | None:intergenic | 30.0% | |
| !! | AAGATGAAGATTTTCAAGGT+TGG | - | chr4_2:7969432-7969451 | None:intergenic | 30.0% |
| ! | CTGAAAGATGAAGATTTTCA+AGG | - | chr4_2:7969436-7969455 | None:intergenic | 30.0% |
| AATAGTAGTGTCTTGCAATT+TGG | + | chr4_2:7969461-7969480 | Msa0586680:CDS | 30.0% | |
| TCTAATCAATCTTCAACGTA+AGG | - | chr4_2:7969775-7969794 | None:intergenic | 30.0% | |
| TCTAATCAATCTTCATCGTA+AGG | - | chr4_2:7969815-7969834 | None:intergenic | 30.0% | |
| ATAGATTGTGAAATCTGACT+TGG | + | chr4_2:7970436-7970455 | Msa0586680:intron | 30.0% | |
| TGTTATTGTCTTACTCAGAA+AGG | + | chr4_2:7970510-7970529 | Msa0586680:intron | 30.0% | |
| GTTATTGTCTTACTCAGAAA+GGG | + | chr4_2:7970511-7970530 | Msa0586680:intron | 30.0% | |
| TTATACAATTGCACACAGTA+TGG | - | chr4_2:7970732-7970751 | None:intergenic | 30.0% | |
| AATGAGCTCAAAATGTTGTT+CGG | - | chr4_2:7970892-7970911 | None:intergenic | 30.0% | |
| GGATAGTATGAATGGTAAAA+GGG | - | chr4_2:7971291-7971310 | None:intergenic | 30.0% | |
| TGGATAGTATGAATGGTAAA+AGG | - | chr4_2:7971292-7971311 | None:intergenic | 30.0% | |
| TCTTGTATGGATAGTATGAA+TGG | - | chr4_2:7971299-7971318 | None:intergenic | 30.0% | |
| GGATAGTATGAATGGTAAAA+GGG | - | chr4_2:7971291-7971310 | None:intergenic | 30.0% | |
| TGGATAGTATGAATGGTAAA+AGG | - | chr4_2:7971292-7971311 | None:intergenic | 30.0% | |
| TCTTGTATGGATAGTATGAA+TGG | - | chr4_2:7971299-7971318 | None:intergenic | 30.0% | |
| !! | CTTCTAAAATGTTCTGCTAT+TGG | - | chr4_2:7971559-7971578 | None:intergenic | 30.0% |
| AGAATTTGTGAAGAATGTGT+TGG | + | chr4_2:7971610-7971629 | Msa0586680:intron | 30.0% | |
| ! | GAATGTGTTGGTATTTATAG+GGG | + | chr4_2:7971622-7971641 | Msa0586680:intron | 30.0% |
| GACTGACATTACACTATATA+TGG | - | chr4_2:7971656-7971675 | None:intergenic | 30.0% | |
| ! | AACTTTCTTGATAACTTCTC+TGG | - | chr4_2:7971903-7971922 | None:intergenic | 30.0% |
| !! | ATCAAGCTTTAAGTTGTAGA+TGG | - | chr4_2:7972189-7972208 | None:intergenic | 30.0% |
| AAAAGAAGTTCTTAGTTGAC+AGG | - | chr4_2:7972221-7972240 | None:intergenic | 30.0% | |
| !! | TTTTGGATTGATTCATGGAT+TGG | - | chr4_2:7972328-7972347 | None:intergenic | 30.0% |
| ! | GCTTTAGATAAATCTTGCTT+CGG | - | chr4_2:7972491-7972510 | None:intergenic | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | + | chr4_2:7973104-7973123 | Msa0586680:intron | 30.0% |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr4_2:7973176-7973195 | None:intergenic | 30.0% | |
| ! | AAAGATAAGCACAAGTATTG+TGG | - | chr4_2:7973483-7973502 | None:intergenic | 30.0% |
| AACAATGGATCTTACATCTT+AGG | + | chr4_2:7974193-7974212 | Msa0586680:intron | 30.0% | |
| !! | AGAAAAAGTAGGTATTGACA+CGG | + | chr4_2:7974332-7974351 | Msa0586680:intron | 30.0% |
| AAATTATGGTTTAGCAGCAA+AGG | + | chr4_2:7974525-7974544 | Msa0586680:intron | 30.0% | |
| !! | TATTGGTGTTCTAAAGTGAA+GGG | - | chr4_2:7974715-7974734 | None:intergenic | 30.0% |
| !! | ATATTGGTGTTCTAAAGTGA+AGG | - | chr4_2:7974716-7974735 | None:intergenic | 30.0% |
| GGGAAACAGAAATTCAATAT+TGG | - | chr4_2:7974732-7974751 | None:intergenic | 30.0% | |
| TGAAAGAGTGATGAAAAGAA+GGG | - | chr4_2:7974752-7974771 | None:intergenic | 30.0% | |
| ATGAAAGAGTGATGAAAAGA+AGG | - | chr4_2:7974753-7974772 | None:intergenic | 30.0% | |
| !!! | GATGAAGTCATTTTTGAAGA+TGG | + | chr4_2:7975068-7975087 | Msa0586680:CDS | 30.0% |
| CGGTTATAACAAGTATTCAT+CGG | + | chr4_2:7975488-7975507 | Msa0586680:intron | 30.0% | |
| ATGGAAGTAGTCCTATATAT+TGG | + | chr4_2:7975646-7975665 | Msa0586680:intron | 30.0% | |
| TGTGGCTAAAAAATAGAAAG+TGG | + | chr4_2:7975811-7975830 | Msa0586680:intron | 30.0% | |
| !!! | AGAATTTTTCAAGACACATG+TGG | - | chr4_2:7975864-7975883 | None:intergenic | 30.0% |
| CATGATACTTAAGAGTTTGA+TGG | - | chr4_2:7976032-7976051 | None:intergenic | 30.0% | |
| CATCAAACTCTTAAGTATCA+TGG | + | chr4_2:7976030-7976049 | Msa0586680:intron | 30.0% | |
| ! | TAAGTATCATGGCCTATTTT+CGG | + | chr4_2:7976041-7976060 | Msa0586680:intron | 30.0% |
| CCTTCCTAGACAAATTAAAA+TGG | - | chr4_2:7976150-7976169 | None:intergenic | 30.0% | |
| !!! | CCATTTTAATTTGTCTAGGA+AGG | + | chr4_2:7976147-7976166 | Msa0586680:intron | 30.0% |
| CAAACATTTGTAGCAACAAA+AGG | + | chr4_2:7976737-7976756 | Msa0586680:CDS | 30.0% | |
| AATTCAGATGAGTACAATTG+TGG | + | chr4_2:7976769-7976788 | Msa0586680:CDS | 30.0% | |
| !! | TACCATTTTGTTTCTCACAA+TGG | - | chr4_2:7976861-7976880 | None:intergenic | 30.0% |
| AATAGTAGTGTCTTGCAATT+TGG | + | chr4_2:7969461-7969480 | Msa0586680:CDS | 30.0% | |
| ATTATGTACCTTAGCAATGA+TGG | - | chr4_2:7976977-7976996 | None:intergenic | 30.0% | |
| CATTGCTAAGGTACATAATA+TGG | + | chr4_2:7976978-7976997 | Msa0586680:intron | 30.0% | |
| TTATCGCATAAAATTCAGTG+TGG | + | chr4_2:7977083-7977102 | Msa0586680:intron | 30.0% | |
| TATCGCATAAAATTCAGTGT+GGG | + | chr4_2:7977084-7977103 | Msa0586680:intron | 30.0% | |
| TAAAAAGAGCAACTTTGCAT+TGG | - | chr4_2:7977347-7977366 | None:intergenic | 30.0% | |
| ! | AATGCAAAGTTGCTCTTTTT+AGG | + | chr4_2:7977346-7977365 | Msa0586680:intron | 30.0% |
| TCGTGTATTGAATAATGATG+AGG | + | chr4_2:7977445-7977464 | Msa0586680:intron | 30.0% | |
| ! | ATTAGTGAAAACTCTGAGAA+TGG | + | chr4_2:7977543-7977562 | Msa0586680:CDS | 30.0% |
| ! | GAAAGTATAGTGTGGATAAG+TGG | - | chr4_2:7966190-7966209 | None:intergenic | 35.0% |
| CACAAAATTAATGGAGGAGT+CGG | + | chr4_2:7966287-7966306 | Msa0586680:exon | 35.0% | |
| ACAAAATTAATGGAGGAGTC+GGG | + | chr4_2:7966288-7966307 | Msa0586680:exon | 35.0% | |
| ! | TTGGCCTTCTAATTCTGATT+TGG | + | chr4_2:7966317-7966336 | Msa0586680:CDS | 35.0% |
| AATAGGTACGTGATTGCAAT+TGG | - | chr4_2:7966349-7966368 | None:intergenic | 35.0% | |
| GATGAAGCCATTCTTAAAGA+TGG | + | chr4_2:7966462-7966481 | Msa0586680:CDS | 35.0% | |
| ! | ATCTGTATGTGATGATGATG+AGG | + | chr4_2:7966494-7966513 | Msa0586680:CDS | 35.0% |
| AGATCCCACAGATAATACAA+AGG | + | chr4_2:7966542-7966561 | Msa0586680:CDS | 35.0% | |
| CAAACCTAATAAGGGATTAG+TGG | - | chr4_2:7967262-7967281 | None:intergenic | 35.0% | |
| GAGTTGTTGCAAACCTAATA+AGG | - | chr4_2:7967271-7967290 | None:intergenic | 35.0% | |
| AATCCTCAACCCTAAAATCT+TGG | + | chr4_2:7967332-7967351 | Msa0586680:intron | 35.0% | |
| TTTGTTACAAACAGGGTCTA+TGG | + | chr4_2:7967564-7967583 | Msa0586680:intron | 35.0% | |
| TTGTTACAAACAGGGTCTAT+GGG | + | chr4_2:7967565-7967584 | Msa0586680:intron | 35.0% | |
| !!! | TTATGTTTTTTATGGGAGGG+GGG | + | chr4_2:7967712-7967731 | Msa0586680:intron | 35.0% |
| TGAGTGAAATTCGCTATGTA+TGG | - | chr4_2:7967790-7967809 | None:intergenic | 35.0% | |
| GGCCGAATAAATTAGATTGA+TGG | - | chr4_2:7968102-7968121 | None:intergenic | 35.0% | |
| TTACTATAACAAGCAGTGGT+AGG | + | chr4_2:7968156-7968175 | Msa0586680:intron | 35.0% | |
| !!! | CTTCTCCATTTTTTATGACC+CGG | + | chr4_2:7968686-7968705 | Msa0586680:intron | 35.0% |
| !!! | TTCTCCATTTTTTATGACCC+GGG | + | chr4_2:7968687-7968706 | Msa0586680:intron | 35.0% |
| ! | AAGCTACACTCTTTTTGTAG+AGG | - | chr4_2:7968816-7968835 | None:intergenic | 35.0% |
| TGTAGCTTAAGCAAAGTGAA+AGG | + | chr4_2:7968828-7968847 | Msa0586680:intron | 35.0% | |
| AAGTGATATTACTCTTCCAG+AGG | + | chr4_2:7969325-7969344 | Msa0586680:CDS | 35.0% | |
| ! | TACCATTTTGTTCCTCACAT+TGG | - | chr4_2:7969391-7969410 | None:intergenic | 35.0% |
| ! | TAATTTCTTATTGGCTAGGG+TGG | + | chr4_2:7970230-7970249 | Msa0586680:intron | 35.0% |
| TAAATTCTGCAGATGGATGA+TGG | + | chr4_2:7970356-7970375 | Msa0586680:intron | 35.0% | |
| TGATGGCTATAACCTTAAAG+TGG | + | chr4_2:7970373-7970392 | Msa0586680:intron | 35.0% | |
| TCACTAGTTCATCCACTTTA+AGG | - | chr4_2:7970388-7970407 | None:intergenic | 35.0% | |
| CGCATGCAAAAAAAATAGAG+TGG | - | chr4_2:7970825-7970844 | None:intergenic | 35.0% | |
| AAACATGTGCTACAAGAAGA+TGG | + | chr4_2:7971108-7971127 | Msa0586680:intron | 35.0% | |
| AAGGTTCTTCTCATCTTGTA+TGG | - | chr4_2:7971312-7971331 | None:intergenic | 35.0% | |
| AAGGTTCTTCTCATCTTGTA+TGG | - | chr4_2:7971312-7971331 | None:intergenic | 35.0% | |
| TATAGTGTAATGTCAGTCGA+TGG | + | chr4_2:7971658-7971677 | Msa0586680:intron | 35.0% | |
| AAAAACGTGGTCAATAGAGT+CGG | + | chr4_2:7971688-7971707 | Msa0586680:intron | 35.0% | |
| !! | CTTTCAGATGTGTTTCTAGT+AGG | - | chr4_2:7972060-7972079 | None:intergenic | 35.0% |
| !! | TTCATGGATTGGTGATCATT+TGG | - | chr4_2:7972317-7972336 | None:intergenic | 35.0% |
| ! | ATTTAGTTGGAATTGGGTTG+TGG | - | chr4_2:7972354-7972373 | None:intergenic | 35.0% |
| AAATCTTGCTTCGGTAGAAT+GGG | - | chr4_2:7972482-7972501 | None:intergenic | 35.0% | |
| TAAATCTTGCTTCGGTAGAA+TGG | - | chr4_2:7972483-7972502 | None:intergenic | 35.0% | |
| TTGTAAATCCACATGAACAG+TGG | + | chr4_2:7972945-7972964 | Msa0586680:intron | 35.0% | |
| GATCTCCACCTCAAATAAAT+TGG | + | chr4_2:7972979-7972998 | Msa0586680:intron | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | - | chr4_2:7973109-7973128 | None:intergenic | 35.0% | |
| GATTACTCCATCATCAACTT+GGG | - | chr4_2:7974649-7974668 | None:intergenic | 35.0% | |
| TGATTACTCCATCATCAACT+TGG | - | chr4_2:7974650-7974669 | None:intergenic | 35.0% | |
| ! | GAAAGTATAGTGTGGATAAG+AGG | - | chr4_2:7966190-7966209 | None:intergenic | 35.0% |
| ! | GGAAGAATGAAAGTATAGTG+TGG | - | chr4_2:7974809-7974828 | None:intergenic | 35.0% |
| ACAAAATTAATGGAGGAGTC+AGG | + | chr4_2:7966288-7966307 | Msa0586680:exon | 35.0% | |
| ACCAAATCAGAATCATGAGA+AGG | - | chr4_2:7974919-7974938 | None:intergenic | 35.0% | |
| ! | TGTGATGATGAGGATCAAAT+TGG | + | chr4_2:7975107-7975126 | Msa0586680:CDS | 35.0% |
| AAGGAACTTTCAGATGTCAT+AGG | + | chr4_2:7975185-7975204 | Msa0586680:CDS | 35.0% | |
| AGATGTCATAGGCTTAAAGA+AGG | + | chr4_2:7975196-7975215 | Msa0586680:CDS | 35.0% | |
| ACCGTTAGTTGAAAAGTTGA+CGG | - | chr4_2:7975472-7975491 | None:intergenic | 35.0% | |
| ! | GGAAGAAGAGAAAAAAGCAT+AGG | + | chr4_2:7976168-7976187 | Msa0586680:intron | 35.0% |
| ATACCGAAACACTGGTAAAA+GGG | - | chr4_2:7976362-7976381 | None:intergenic | 35.0% | |
| TATACCGAAACACTGGTAAA+AGG | - | chr4_2:7976363-7976382 | None:intergenic | 35.0% | |
| ! | TAAAGAGTATACCGAAACAC+TGG | - | chr4_2:7976370-7976389 | None:intergenic | 35.0% |
| GTACTCATCTGAATTCACTT+TGG | - | chr4_2:7976764-7976783 | None:intergenic | 35.0% | |
| AAGTGATAATACTCTTCCAG+AGG | + | chr4_2:7976795-7976814 | Msa0586680:CDS | 35.0% | |
| GTCCATTGTGAGAAACAAAA+TGG | + | chr4_2:7976856-7976875 | Msa0586680:CDS | 35.0% | |
| AAGATGAAGATTTGCAAGGT+GGG | - | chr4_2:7976902-7976921 | None:intergenic | 35.0% | |
| AAAGATGAAGATTTGCAAGG+TGG | - | chr4_2:7976903-7976922 | None:intergenic | 35.0% | |
| CTGAAAGATGAAGATTTGCA+AGG | - | chr4_2:7976906-7976925 | None:intergenic | 35.0% | |
| !!! | TAACATTTTTTCTAACGGCC+AGG | - | chr4_2:7977167-7977186 | None:intergenic | 35.0% |
| TTGTTTAACATGTGCCCTAA+GGG | + | chr4_2:7977369-7977388 | Msa0586680:intron | 35.0% | |
| AGAAGAAAACAAGAGAAGGG+TGG | - | chr4_2:7966144-7966163 | None:intergenic | 40.0% | |
| ACGAACCTTCTTTAAGCCTA+TGG | - | chr4_2:7966616-7966635 | None:intergenic | 40.0% | |
| TCGAAGTGACTTAGGATTGA+AGG | + | chr4_2:7967032-7967051 | Msa0586680:intron | 40.0% | |
| ! | CCTAATAAGGGATTAGTGGA+GGG | - | chr4_2:7967258-7967277 | None:intergenic | 40.0% |
| ! | ACCTAATAAGGGATTAGTGG+AGG | - | chr4_2:7967259-7967278 | None:intergenic | 40.0% |
| TGTTACAAACAGGGTCTATG+GGG | + | chr4_2:7967566-7967585 | Msa0586680:intron | 40.0% | |
| GTGGTAGGATGATTTACAGT+AGG | + | chr4_2:7968171-7968190 | Msa0586680:intron | 40.0% | |
| TCTTGTCATAGTCCAATGTG+AGG | + | chr4_2:7969376-7969395 | Msa0586680:CDS | 40.0% | |
| GTCCAATGTGAGGAACAAAA+TGG | + | chr4_2:7969386-7969405 | Msa0586680:CDS | 40.0% | |
| TGAGGAACAAAATGGTATCC+TGG | + | chr4_2:7969394-7969413 | Msa0586680:CDS | 40.0% | |
| !!! | GGTTGGTCAATATTTTGACC+AGG | - | chr4_2:7969415-7969434 | None:intergenic | 40.0% |
| TATATGTACCTTGGCAACGA+TGG | - | chr4_2:7969507-7969526 | None:intergenic | 40.0% | |
| ! | TGTCGAGATTGCTATTCTCA+GGG | - | chr4_2:7970414-7970433 | None:intergenic | 40.0% |
| TGAAATTCTCCCCCAAAGTA+CGG | - | chr4_2:7970540-7970559 | None:intergenic | 40.0% | |
| ACCAAAGTGCATGTCTTTGT+TGG | + | chr4_2:7970617-7970636 | Msa0586680:intron | 40.0% | |
| ACCAACAAAGACATGCACTT+TGG | - | chr4_2:7970621-7970640 | None:intergenic | 40.0% | |
| AATTGCACACAGTATGGACT+GGG | - | chr4_2:7970726-7970745 | None:intergenic | 40.0% | |
| ATGTGCTACAAGAAGATGGA+GGG | + | chr4_2:7971112-7971131 | Msa0586680:intron | 40.0% | |
| CATCCTCAGAAAGGGAAAAT+GGG | + | chr4_2:7971211-7971230 | Msa0586680:intron | 40.0% | |
| GAAGAACCTTTGCATGAAGA+TGG | + | chr4_2:7971322-7971341 | Msa0586680:intron | 40.0% | |
| AACCTTTGCATGAAGATGGA+GGG | + | chr4_2:7971326-7971345 | Msa0586680:intron | 40.0% | |
| GAGAAGAACCTTTGCATGAA+AGG | + | chr4_2:7971320-7971339 | Msa0586680:intron | 40.0% | |
| TGTAATGTCAGTCGATGGAA+GGG | + | chr4_2:7971663-7971682 | Msa0586680:intron | 40.0% | |
| TGTTGCTCTTGAAGCTTCTT+GGG | - | chr4_2:7971817-7971836 | None:intergenic | 40.0% | |
| TTGTTGCTCTTGAAGCTTCT+TGG | - | chr4_2:7971818-7971837 | None:intergenic | 40.0% | |
| !! | ATTATCTATCCGAAAGCACC+AGG | + | chr4_2:7971837-7971856 | Msa0586680:intron | 40.0% |
| !! | TTATCTATCCGAAAGCACCA+GGG | + | chr4_2:7971838-7971857 | Msa0586680:intron | 40.0% |
| ! | CTCTTTTGAATTTGAACCCC+TGG | - | chr4_2:7971858-7971877 | None:intergenic | 40.0% |
| !! | ATGGATTGGTGATCATTTGG+TGG | - | chr4_2:7972314-7972333 | None:intergenic | 40.0% |
| !!! | GGTGGTTTTGGATTGATTCA+TGG | - | chr4_2:7972333-7972352 | None:intergenic | 40.0% |
| ! | AGAAACGTGTTGATCAGAGT+CGG | + | chr4_2:7972561-7972580 | Msa0586680:intron | 40.0% |
| AATGAGTACCACTGTTCATG+TGG | - | chr4_2:7972956-7972975 | None:intergenic | 40.0% | |
| ! | CGATGTGAGGATTTTGTTGA+TGG | - | chr4_2:7974026-7974045 | None:intergenic | 40.0% |
| TGAATCATGATGTCGATGTG+AGG | - | chr4_2:7974039-7974058 | None:intergenic | 40.0% | |
| ! | ACCATTTGGGTGACAACTTT+TGG | + | chr4_2:7974290-7974309 | Msa0586680:intron | 40.0% |
| ! | CCATTTGGGTGACAACTTTT+GGG | + | chr4_2:7974291-7974310 | Msa0586680:intron | 40.0% |
| GGTGTAAGTAAGCAGCTATA+GGG | - | chr4_2:7974493-7974512 | None:intergenic | 40.0% | |
| TGGTGTAAGTAAGCAGCTAT+AGG | - | chr4_2:7974494-7974513 | None:intergenic | 40.0% | |
| TTATGGTTTAGCAGCAAAGG+TGG | + | chr4_2:7974528-7974547 | Msa0586680:intron | 40.0% | |
| ! | TCTAAAGTGAAGGGTAGCTA+AGG | - | chr4_2:7974706-7974725 | None:intergenic | 40.0% |
| TATAGTGTGGATAAGAGGTG+GGG | - | chr4_2:7974796-7974815 | None:intergenic | 40.0% | |
| GTATAGTGTGGATAAGAGGT+GGG | - | chr4_2:7974797-7974816 | None:intergenic | 40.0% | |
| AGTATAGTGTGGATAAGAGG+TGG | - | chr4_2:7974798-7974817 | None:intergenic | 40.0% | |
| GCCTTCTCATGATTCTGATT+TGG | + | chr4_2:7974915-7974934 | Msa0586680:intron | 40.0% | |
| ! | TGAATCTGTGTGTGATGATG+AGG | + | chr4_2:7975097-7975116 | Msa0586680:CDS | 40.0% |
| AGATCCCACAGATGATACAA+AGG | + | chr4_2:7975130-7975149 | Msa0586680:CDS | 40.0% | |
| GATCCCACAGATGATACAAA+GGG | + | chr4_2:7975131-7975150 | Msa0586680:CDS | 40.0% | |
| CATCCCTTTGTATCATCTGT+GGG | - | chr4_2:7975137-7975156 | None:intergenic | 40.0% | |
| TACAAAGGGATGCAATGAGA+AGG | + | chr4_2:7975145-7975164 | Msa0586680:CDS | 40.0% | |
| GGAGATAACAGAGAGATTGA+AGG | + | chr4_2:7975166-7975185 | Msa0586680:CDS | 40.0% | |
| GTCATAGGCTTAAAGAAGGT+TGG | + | chr4_2:7975200-7975219 | Msa0586680:intron | 40.0% | |
| ! | GCCGTCAACTTTTCAACTAA+CGG | + | chr4_2:7975468-7975487 | Msa0586680:intron | 40.0% |
| GGCAAATAGTGCATTGTGAT+TGG | - | chr4_2:7975777-7975796 | None:intergenic | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | + | chr4_2:7975785-7975804 | Msa0586680:intron | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | + | chr4_2:7975788-7975807 | Msa0586680:intron | 40.0% | |
| GTTTGATGGAGATGCAAGTA+TGG | - | chr4_2:7976018-7976037 | None:intergenic | 40.0% | |
| ! | TATCATGGCCTATTTTCGGA+TGG | + | chr4_2:7976045-7976064 | Msa0586680:intron | 40.0% |
| !! | CATAGTCTTTAGCTTTCTCC+AGG | - | chr4_2:7976669-7976688 | None:intergenic | 40.0% |
| GGAGAAAGCTAAAGACTATG+TGG | + | chr4_2:7976669-7976688 | Msa0586680:CDS | 40.0% | |
| ! | AATGATGGTGATGTCAAGGA+TGG | - | chr4_2:7976962-7976981 | None:intergenic | 40.0% |
| ! | TAGCAATGATGGTGATGTCA+AGG | - | chr4_2:7976966-7976985 | None:intergenic | 40.0% |
| TGACATCACCATCATTGCTA+AGG | + | chr4_2:7976966-7976985 | Msa0586680:CDS | 40.0% | |
| TTCTTAACATGTGCCCTTGA+GGG | - | chr4_2:7977255-7977274 | None:intergenic | 40.0% | |
| TTTCTTAACATGTGCCCTTG+AGG | - | chr4_2:7977256-7977275 | None:intergenic | 40.0% | |
| GTTGTTTAACATGTGCCCTA+AGG | + | chr4_2:7977368-7977387 | Msa0586680:intron | 40.0% | |
| TATACAATGCAGATGGGTGA+TGG | + | chr4_2:7977499-7977518 | Msa0586680:intron | 40.0% | |
| AAACAAGAGAAGGGTGGTTG+AGG | - | chr4_2:7966138-7966157 | None:intergenic | 45.0% | |
| GGAGATCACAGAGATGTTGA+AGG | + | chr4_2:7966578-7966597 | Msa0586680:CDS | 45.0% | |
| AAGGAACTTTCAGACGCCAT+AGG | + | chr4_2:7966597-7966616 | Msa0586680:CDS | 45.0% | |
| AGACGCCATAGGCTTAAAGA+AGG | + | chr4_2:7966608-7966627 | Msa0586680:CDS | 45.0% | |
| CCCTCCACTAATCCCTTATT+AGG | + | chr4_2:7967255-7967274 | Msa0586680:intron | 45.0% | |
| !!! | GAGCCAAGATTTTAGGGTTG+AGG | - | chr4_2:7967338-7967357 | None:intergenic | 45.0% |
| !!! | TCCATTTTTTATGACCCGGG+CGG | + | chr4_2:7968690-7968709 | Msa0586680:intron | 45.0% |
| AAATCATTGTCAGGGGTCGT+TGG | + | chr4_2:7968873-7968892 | Msa0586680:intron | 45.0% | |
| AGAGAGCTAGAACAAGAAGC+TGG | + | chr4_2:7969242-7969261 | Msa0586680:CDS | 45.0% | |
| GACACTCTTGCTTTAACCTC+TGG | - | chr4_2:7969344-7969363 | None:intergenic | 45.0% | |
| ! | GTGTCGAGATTGCTATTCTC+AGG | - | chr4_2:7970415-7970434 | None:intergenic | 45.0% |
| GGATTGAGCTACGTAAGTGT+AGG | + | chr4_2:7970696-7970715 | Msa0586680:intron | 45.0% | |
| CAATTGCACACAGTATGGAC+TGG | - | chr4_2:7970727-7970746 | None:intergenic | 45.0% | |
| CATGTGCTACAAGAAGATGG+AGG | + | chr4_2:7971111-7971130 | Msa0586680:intron | 45.0% | |
| TGTGCTACAAGAAGATGGAG+GGG | + | chr4_2:7971113-7971132 | Msa0586680:intron | 45.0% | |
| ACATCCTAAGAAGGAGAGGA+GGG | + | chr4_2:7971167-7971186 | Msa0586680:intron | 45.0% | |
| GCATCCTCAGAAAGGGAAAA+TGG | + | chr4_2:7971210-7971229 | Msa0586680:intron | 45.0% | |
| ! | TCTCCCATTTTCCCTTTCTG+AGG | - | chr4_2:7971217-7971236 | None:intergenic | 45.0% |
| GAACCTTTGCATGAAGATGG+AGG | + | chr4_2:7971325-7971344 | Msa0586680:intron | 45.0% | |
| ACCTTTGCATGAAGATGGAG+GGG | + | chr4_2:7971327-7971346 | Msa0586680:intron | 45.0% | |
| ACATCCTAAGAAGGAGAGGA+GGG | + | chr4_2:7971167-7971186 | Msa0586680:intron | 45.0% | |
| GCATCCTCAGAAAGGGAAAT+GGG | + | chr4_2:7971424-7971443 | Msa0586680:intron | 45.0% | |
| TTCTCCCATTTCCCTTTCTG+AGG | - | chr4_2:7971431-7971450 | None:intergenic | 45.0% | |
| !! | GCTATTGGCCTTTCATGCAA+AGG | - | chr4_2:7971544-7971563 | None:intergenic | 45.0% |
| GTGTAATGTCAGTCGATGGA+AGG | + | chr4_2:7971662-7971681 | Msa0586680:intron | 45.0% | |
| CGATGGAAGGGAAAAAAACG+TGG | + | chr4_2:7971675-7971694 | Msa0586680:intron | 45.0% | |
| ! | ATGTTTTCCCTTCCATCGAC+TGG | - | chr4_2:7971715-7971734 | None:intergenic | 45.0% |
| ! | AATCTTCGAGTGGCGGTTTT+TGG | - | chr4_2:7971793-7971812 | None:intergenic | 45.0% |
| CTTCTTGGGTAATCTTCGAG+TGG | - | chr4_2:7971803-7971822 | None:intergenic | 45.0% | |
| !! | TATCTATCCGAAAGCACCAG+GGG | + | chr4_2:7971839-7971858 | Msa0586680:intron | 45.0% |
| ATTTGAACCCCTGGTGCTTT+CGG | - | chr4_2:7971849-7971868 | None:intergenic | 45.0% | |
| !! | GAATTGGGTTGTGGTGGTTT+TGG | - | chr4_2:7972345-7972364 | None:intergenic | 45.0% |
| ! | TAGTTGGAATTGGGTTGTGG+TGG | - | chr4_2:7972351-7972370 | None:intergenic | 45.0% |
| ACCTTCCCATGCTTCAAACA+TGG | + | chr4_2:7973352-7973371 | Msa0586680:intron | 45.0% | |
| ! | ACCATGTTTGAAGCATGGGA+AGG | - | chr4_2:7973356-7973375 | None:intergenic | 45.0% |
| ! | AGCGACCATGTTTGAAGCAT+GGG | - | chr4_2:7973360-7973379 | None:intergenic | 45.0% |
| ! | TAGCGACCATGTTTGAAGCA+TGG | - | chr4_2:7973361-7973380 | None:intergenic | 45.0% |
| CTTCAAACATGGTCGCTATC+TGG | + | chr4_2:7973363-7973382 | Msa0586680:intron | 45.0% | |
| CCCAAAAGTTGTCACCCAAA+TGG | - | chr4_2:7974294-7974313 | None:intergenic | 45.0% | |
| !! | GACTCATCCCAAGTTGATGA+TGG | + | chr4_2:7974639-7974658 | Msa0586680:intron | 45.0% |
| AGGTTGTGAGGTGAGTAGTA+TGG | - | chr4_2:7974686-7974705 | None:intergenic | 45.0% | |
| TAAGAGGTGGGGTTGTGTAT+AGG | - | chr4_2:7974785-7974804 | None:intergenic | 45.0% | |
| TGGAGGAGTCAGGAGAAAAT+TGG | + | chr4_2:7974893-7974912 | Msa0586680:intron | 45.0% | |
| GCATCCCTTTGTATCATCTG+TGG | - | chr4_2:7975138-7975157 | None:intergenic | 45.0% | |
| ! | CAGCCCTTTTACCAGTGTTT+CGG | + | chr4_2:7976356-7976375 | Msa0586680:intron | 45.0% |
| AGAGAGCTAGAACAAGTAGC+TGG | + | chr4_2:7976712-7976731 | Msa0586680:CDS | 45.0% | |
| GACTCACATAAGTTTCAGCC+TGG | + | chr4_2:7977146-7977165 | Msa0586680:intron | 45.0% | |
| ! | TCTGCTAACTTGTGCCCTTA+GGG | - | chr4_2:7977386-7977405 | None:intergenic | 45.0% |
| !!! | ATTATTTTTTTAAATAAAGT+AGG | + | chr4_2:7966887-7966906 | Msa0586680:intron | 5.0% |
| !!! | TTATTTTTTTAAATAAAGTA+GGG | + | chr4_2:7966888-7966907 | Msa0586680:intron | 5.0% |
| !!! | TAGTTATATTTTAATTTTAA+AGG | + | chr4_2:7968731-7968750 | Msa0586680:intron | 5.0% |
| !!! | TTTTAATAATTTACTAAAAA+GGG | - | chr4_2:7970177-7970196 | None:intergenic | 5.0% |
| !!! | ATTTTAATAATTTACTAAAA+AGG | - | chr4_2:7970178-7970197 | None:intergenic | 5.0% |
| !! | AATATTAATTAATTTCTTAT+TGG | + | chr4_2:7970221-7970240 | Msa0586680:intron | 5.0% |
| !!! | ATAAATTTTATTATGTAAAA+AGG | - | chr4_2:7972155-7972174 | None:intergenic | 5.0% |
| !!! | TAATTATTTTTATATTTAGT+TGG | - | chr4_2:7972367-7972386 | None:intergenic | 5.0% |
| !!! | TTTTATATAAGATAAATATT+AGG | - | chr4_2:7972859-7972878 | None:intergenic | 5.0% |
| TGGAGGAGTCGGGAGAAAAT+TGG | + | chr4_2:7966298-7966317 | Msa0586680:CDS | 50.0% | |
| GATGATAGATGCCCCATGTG+CGG | + | chr4_2:7966962-7966981 | Msa0586680:intron | 50.0% | |
| ACAGAAAGCCATCCGCACAT+GGG | - | chr4_2:7966977-7966996 | None:intergenic | 50.0% | |
| ACCGCCCGGGTCATAAAAAA+TGG | - | chr4_2:7968694-7968713 | None:intergenic | 50.0% | |
| ! | AACGATGGTGATGTCAAGGG+TGG | - | chr4_2:7969492-7969511 | None:intergenic | 50.0% |
| ! | GGCAACGATGGTGATGTCAA+GGG | - | chr4_2:7969495-7969514 | None:intergenic | 50.0% |
| ! | TGGCAACGATGGTGATGTCA+AGG | - | chr4_2:7969496-7969515 | None:intergenic | 50.0% |
| TGACATCACCATCGTTGCCA+AGG | + | chr4_2:7969496-7969515 | Msa0586680:CDS | 50.0% | |
| AGAAAGGGCCACCGTACTTT+GGG | + | chr4_2:7970526-7970545 | Msa0586680:intron | 50.0% | |
| AATTCTCCCCCAAAGTACGG+TGG | - | chr4_2:7970537-7970556 | None:intergenic | 50.0% | |
| GTGCTACAAGAAGATGGAGG+GGG | + | chr4_2:7971114-7971133 | Msa0586680:intron | 50.0% | |
| TCCTCTCGCACATCCTAAGA+AGG | + | chr4_2:7971158-7971177 | Msa0586680:intron | 50.0% | |
| TCCTTCTTAGGATGTGCGAG+AGG | - | chr4_2:7971162-7971181 | None:intergenic | 50.0% | |
| TCGCACATCCTAAGAAGGAG+AGG | + | chr4_2:7971163-7971182 | Msa0586680:intron | 50.0% | |
| CACATCCTAAGAAGGAGAGG+AGG | + | chr4_2:7971166-7971185 | Msa0586680:intron | 50.0% | |
| CATCCTAAGAAGGAGAGGAG+GGG | + | chr4_2:7971168-7971187 | Msa0586680:intron | 50.0% | |
| ATCCTAAGAAGGAGAGGAGG+GGG | + | chr4_2:7971169-7971188 | Msa0586680:intron | 50.0% | |
| TCTCTCACGCATCCTCAGAA+AGG | + | chr4_2:7971202-7971221 | Msa0586680:intron | 50.0% | |
| CTCTCACGCATCCTCAGAAA+GGG | + | chr4_2:7971203-7971222 | Msa0586680:intron | 50.0% | |
| CCTTTGCATGAAGATGGAGG+GGG | + | chr4_2:7971328-7971347 | Msa0586680:intron | 50.0% | |
| TCCTCTCGCACATCCTAAGA+AGG | + | chr4_2:7971158-7971177 | Msa0586680:intron | 50.0% | |
| TCCTTCTTAGGATGTGCGAG+AGG | - | chr4_2:7971162-7971181 | None:intergenic | 50.0% | |
| TCGCACATCCTAAGAAGGAG+AGG | + | chr4_2:7971163-7971182 | Msa0586680:intron | 50.0% | |
| CACATCCTAAGAAGGAGAGG+AGG | + | chr4_2:7971166-7971185 | Msa0586680:intron | 50.0% | |
| CATCCTAAGAAGGAGAGGAG+GGG | + | chr4_2:7971168-7971187 | Msa0586680:intron | 50.0% | |
| ATCCTAAGAAGGAGAGGAGG+GGG | + | chr4_2:7971169-7971188 | Msa0586680:intron | 50.0% | |
| TCTCTCACGCATCCTCAGAA+AGG | + | chr4_2:7971202-7971221 | Msa0586680:intron | 50.0% | |
| CTCTCACGCATCCTCAGAAA+GGG | + | chr4_2:7971203-7971222 | Msa0586680:intron | 50.0% | |
| CGCATCCTCAGAAAGGGAAA+TGG | + | chr4_2:7971209-7971228 | Msa0586680:intron | 50.0% | |
| AATAGAGTCGGACCAGTCGA+TGG | + | chr4_2:7971700-7971719 | Msa0586680:intron | 50.0% | |
| GCTGAGTCTTTCGAGCTTCT+TGG | - | chr4_2:7971759-7971778 | None:intergenic | 50.0% | |
| CTTGGGTAATCTTCGAGTGG+CGG | - | chr4_2:7971800-7971819 | None:intergenic | 50.0% | |
| GAAGGGTAGCTAAGGTTGTG+AGG | - | chr4_2:7974698-7974717 | None:intergenic | 50.0% | |
| AGGTGGGGTTGTGTATAGGT+GGG | - | chr4_2:7974781-7974800 | None:intergenic | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | + | chr4_2:7975793-7975812 | Msa0586680:intron | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | - | chr4_2:7975798-7975817 | None:intergenic | 50.0% | |
| GACACTCTTGCTTTGACCTC+TGG | - | chr4_2:7976814-7976833 | None:intergenic | 50.0% | |
| ! | ACTGCTAACTTGTGCCCTCA+AGG | + | chr4_2:7977238-7977257 | Msa0586680:intron | 50.0% |
| ! | CTGCTAACTTGTGCCCTCAA+GGG | + | chr4_2:7977239-7977258 | Msa0586680:intron | 50.0% |
| ! | GTCTGCTAACTTGTGCCCTT+AGG | - | chr4_2:7977387-7977406 | None:intergenic | 50.0% |
| AAGGGTGGTTGAGGTTGTGG+AGG | - | chr4_2:7966129-7966148 | None:intergenic | 55.0% | |
| GAGAAGGGTGGTTGAGGTTG+TGG | - | chr4_2:7966132-7966151 | None:intergenic | 55.0% | |
| ATAGATGCCCCATGTGCGGA+TGG | + | chr4_2:7966966-7966985 | Msa0586680:intron | 55.0% | |
| CAGAAAGCCATCCGCACATG+GGG | - | chr4_2:7966976-7966995 | None:intergenic | 55.0% | |
| CACAGAAAGCCATCCGCACA+TGG | - | chr4_2:7966978-7966997 | None:intergenic | 55.0% | |
| ATGTCTAACCTGGGCAACGC+CGG | + | chr4_2:7967821-7967840 | Msa0586680:intron | 55.0% | |
| !!! | TTTTTTACCCGGCGTTGCCC+AGG | - | chr4_2:7967832-7967851 | None:intergenic | 55.0% |
| CAGAAAGGGCCACCGTACTT+TGG | + | chr4_2:7970525-7970544 | Msa0586680:intron | 55.0% | |
| GAAAGGGCCACCGTACTTTG+GGG | + | chr4_2:7970527-7970546 | Msa0586680:intron | 55.0% | |
| AAAGGGCCACCGTACTTTGG+GGG | + | chr4_2:7970528-7970547 | Msa0586680:intron | 55.0% | |
| CCCCCTCCATCTTCATGCAA+AGG | - | chr4_2:7971331-7971350 | None:intergenic | 55.0% | |
| AGTCGGACCAGTCGATGGAA+GGG | + | chr4_2:7971705-7971724 | Msa0586680:intron | 55.0% | |
| !! | CTTCGAGTGGCGGTTTTTGG+AGG | - | chr4_2:7971790-7971809 | None:intergenic | 55.0% |
| GAGGTGAGTAGTATGGTGCG+TGG | - | chr4_2:7974679-7974698 | None:intergenic | 55.0% | |
| GAGGTGGGGTTGTGTATAGG+TGG | - | chr4_2:7974782-7974801 | None:intergenic | 55.0% | |
| GATGGACGACACTTCGATCC+TGG | + | chr4_2:7976648-7976667 | Msa0586680:intron | 55.0% | |
| TGTCTAACCTGGGCAACGCC+GGG | + | chr4_2:7967822-7967841 | Msa0586680:intron | 60.0% | |
| TTATGACCCGGGCGGTAGCA+CGG | + | chr4_2:7968698-7968717 | Msa0586680:intron | 60.0% | |
| ! | TTTTACCCGTGCTACCGCCC+GGG | - | chr4_2:7968707-7968726 | None:intergenic | 60.0% |
| ! | CTTTTACCCGTGCTACCGCC+CGG | - | chr4_2:7968708-7968727 | None:intergenic | 60.0% |
| CTCCCCCTCCTCTCCTTCTT+AGG | - | chr4_2:7971174-7971193 | None:intergenic | 60.0% | |
| CTCCCCCTCCTCTCCTTCTT+AGG | - | chr4_2:7971174-7971193 | None:intergenic | 60.0% | |
| GAGTCGGACCAGTCGATGGA+AGG | + | chr4_2:7971704-7971723 | Msa0586680:intron | 60.0% | |
| TGAAGCATGGGAAGGTCGCG+TGG | - | chr4_2:7973348-7973367 | None:intergenic | 60.0% | |
| TATGACCCGGGCGGTAGCAC+GGG | + | chr4_2:7968699-7968718 | Msa0586680:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 7966083 | 7977765 | 7966083 | ID=Msa0586680;Name=Msa0586680 |
| chr4_2 | mRNA | 7966083 | 7977765 | 7966083 | ID=Msa0586680-mRNA-1;Parent=Msa0586680;Name=Msa0586680-mRNA-1;_AED=0.24;_eAED=0.24;_QI=214|0.8|1|1|1|1|6|183|375 |
| chr4_2 | exon | 7966083 | 7966338 | 7966083 | ID=Msa0586680-mRNA-1:exon:2094;Parent=Msa0586680-mRNA-1 |
| chr4_2 | exon | 7966453 | 7966629 | 7966453 | ID=Msa0586680-mRNA-1:exon:2095;Parent=Msa0586680-mRNA-1 |
| chr4_2 | exon | 7969179 | 7969517 | 7969179 | ID=Msa0586680-mRNA-1:exon:2096;Parent=Msa0586680-mRNA-1 |
| chr4_2 | exon | 7975059 | 7975217 | 7975059 | ID=Msa0586680-mRNA-1:exon:2097;Parent=Msa0586680-mRNA-1 |
| chr4_2 | exon | 7976649 | 7976987 | 7976649 | ID=Msa0586680-mRNA-1:exon:2098;Parent=Msa0586680-mRNA-1 |
| chr4_2 | exon | 7977511 | 7977765 | 7977511 | ID=Msa0586680-mRNA-1:exon:2099;Parent=Msa0586680-mRNA-1 |
| chr4_2 | five_prime_UTR | 7966083 | 7966296 | 7966083 | ID=Msa0586680-mRNA-1:five_prime_utr;Parent=Msa0586680-mRNA-1 |
| chr4_2 | CDS | 7966297 | 7966338 | 7966297 | ID=Msa0586680-mRNA-1:cds;Parent=Msa0586680-mRNA-1 |
| chr4_2 | CDS | 7966453 | 7966629 | 7966453 | ID=Msa0586680-mRNA-1:cds;Parent=Msa0586680-mRNA-1 |
| chr4_2 | CDS | 7969179 | 7969517 | 7969179 | ID=Msa0586680-mRNA-1:cds;Parent=Msa0586680-mRNA-1 |
| chr4_2 | CDS | 7975059 | 7975217 | 7975059 | ID=Msa0586680-mRNA-1:cds;Parent=Msa0586680-mRNA-1 |
| chr4_2 | CDS | 7976649 | 7976987 | 7976649 | ID=Msa0586680-mRNA-1:cds;Parent=Msa0586680-mRNA-1 |
| chr4_2 | CDS | 7977511 | 7977582 | 7977511 | ID=Msa0586680-mRNA-1:cds;Parent=Msa0586680-mRNA-1 |
| chr4_2 | three_prime_UTR | 7977583 | 7977765 | 7977583 | ID=Msa0586680-mRNA-1:three_prime_utr;Parent=Msa0586680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
