Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663230 | XP_003604324.2 | 76.596 | 188 | 37 | 4 | 1 | 186 | 1 | 183 | 1.24e-87 | 273 |
| Msa0663230 | XP_003604324.2 | 90.052 | 191 | 17 | 2 | 187 | 375 | 16 | 206 | 2.73e-110 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663230 | sp|Q9T072|BH025_ARATH | 40.244 | 164 | 84 | 5 | 223 | 373 | 163 | 325 | 8.46e-23 | 100 |
| Msa0663230 | sp|Q9T072|BH025_ARATH | 40.972 | 144 | 71 | 5 | 57 | 187 | 163 | 305 | 1.43e-20 | 94.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663230 | G7JFR2 | 76.596 | 188 | 37 | 4 | 1 | 186 | 1 | 183 | 5.94e-88 | 273 |
| Msa0663230 | G7JFR2 | 90.052 | 191 | 17 | 2 | 187 | 375 | 16 | 206 | 1.31e-110 | 331 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0071250 | Msa0663230 | 0.802409 | 5.688246e-49 | -8.615850e-47 |
| Msa0106620 | Msa0663230 | 0.806322 | 8.702406e-50 | -8.615850e-47 |
| Msa0626690 | Msa0663230 | 0.899604 | 1.681813e-77 | -8.615850e-47 |
| Msa0663230 | Msa0709160 | 0.807299 | 5.410546e-50 | -8.615850e-47 |
| Msa0663230 | Msa0721280 | 0.815461 | 9.134528e-52 | -8.615850e-47 |
| Msa0663230 | Msa0773590 | 0.805356 | 1.388729e-49 | -8.615850e-47 |
| Msa0663230 | Msa0789560 | 0.806166 | 9.384003e-50 | -8.615850e-47 |
| Msa0663230 | Msa0811040 | 0.810421 | 1.162341e-50 | -8.615850e-47 |
| Msa0663230 | Msa0866400 | 0.801297 | 9.620749e-49 | -8.615850e-47 |
| Msa0663230 | Msa0866410 | 0.802083 | 6.638376e-49 | -8.615850e-47 |
| Msa0663230 | Msa0867980 | 0.898060 | 7.679205e-77 | -8.615850e-47 |
| Msa0663230 | Msa0958030 | 0.804308 | 2.299073e-49 | -8.615850e-47 |
| Msa0663230 | Msa0992580 | 0.806240 | 9.054965e-50 | -8.615850e-47 |
| Msa0663230 | Msa1008750 | 0.801695 | 7.976228e-49 | -8.615850e-47 |
| Msa0663230 | Msa1040980 | 0.804277 | 2.333717e-49 | -8.615850e-47 |
| Msa0663230 | Msa1063420 | 0.816310 | 5.908222e-52 | -8.615850e-47 |
| Msa0663230 | Msa1130530 | 0.806568 | 7.724093e-50 | -8.615850e-47 |
| Msa0663230 | Msa1208790 | 0.820448 | 6.821346e-53 | -8.615850e-47 |
| Msa0663230 | Msa1258980 | 0.822970 | 1.781619e-53 | -8.615850e-47 |
| Msa0663230 | Msa1262010 | 0.807226 | 5.604732e-50 | -8.615850e-47 |
| Msa0663230 | Msa1320820 | 0.805341 | 1.398954e-49 | -8.615850e-47 |
| Msa0663230 | Msa1330630 | 0.823751 | 1.170330e-53 | -8.615850e-47 |
| Msa0663230 | Msa1337170 | 0.819316 | 1.238491e-52 | -8.615850e-47 |
| Msa0663230 | Msa1341490 | 0.816932 | 4.286086e-52 | -8.615850e-47 |
| Msa0663230 | Msa1357890 | 0.811680 | 6.201469e-51 | -8.615850e-47 |
| Msa0663230 | Msa1391750 | 0.808790 | 2.604807e-50 | -8.615850e-47 |
| Msa0663230 | Msa1398090 | 0.824379 | 8.331480e-54 | -8.615850e-47 |
| Msa0207030 | Msa0663230 | 0.811842 | 5.718311e-51 | -8.615850e-47 |
| Msa0366210 | Msa0663230 | 0.805902 | 1.066820e-49 | -8.615850e-47 |
| Msa0389910 | Msa0663230 | 0.813473 | 2.514413e-51 | -8.615850e-47 |
| Msa0440510 | Msa0663230 | 0.801890 | 7.273131e-49 | -8.615850e-47 |
| Msa0249310 | Msa0663230 | 0.805476 | 1.310857e-49 | -8.615850e-47 |
| Msa0287790 | Msa0663230 | 0.817540 | 3.127716e-52 | -8.615850e-47 |
| Msa0321690 | Msa0663230 | 0.809777 | 1.600301e-50 | -8.615850e-47 |
| Msa0491000 | Msa0663230 | 0.804303 | 2.304635e-49 | -8.615850e-47 |
| Msa0506830 | Msa0663230 | 0.817054 | 4.023838e-52 | -8.615850e-47 |
| Msa0530710 | Msa0663230 | 0.805596 | 1.236867e-49 | -8.615850e-47 |
| Msa0586680 | Msa0663230 | 0.971106 | 1.210581e-132 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663230 | MtrunA17_Chr4g0002831 | 90.052 | 191 | 17 | 2 | 187 | 375 | 16 | 206 | 2.51e-114 | 331 |
| Msa0663230 | MtrunA17_Chr4g0002831 | 76.596 | 188 | 37 | 4 | 1 | 186 | 1 | 183 | 1.14e-91 | 273 |
| Msa0663230 | MtrunA17_Chr4g0002851 | 83.871 | 186 | 19 | 2 | 1 | 186 | 1 | 175 | 6.02e-103 | 302 |
| Msa0663230 | MtrunA17_Chr4g0002851 | 73.958 | 192 | 39 | 2 | 187 | 375 | 15 | 198 | 2.51e-90 | 270 |
| Msa0663230 | MtrunA17_Chr7g0233441 | 82.796 | 186 | 21 | 2 | 1 | 186 | 1 | 175 | 1.35e-99 | 293 |
| Msa0663230 | MtrunA17_Chr7g0233441 | 78.836 | 189 | 35 | 2 | 187 | 375 | 15 | 198 | 2.63e-96 | 285 |
| Msa0663230 | MtrunA17_Chr2g0333621 | 48.485 | 165 | 67 | 4 | 223 | 372 | 149 | 310 | 1.81e-36 | 134 |
| Msa0663230 | MtrunA17_Chr2g0333621 | 45.139 | 144 | 63 | 4 | 57 | 186 | 149 | 290 | 2.88e-25 | 104 |
| Msa0663230 | MtrunA17_Chr4g0002801 | 45.833 | 168 | 74 | 4 | 222 | 372 | 162 | 329 | 7.51e-35 | 130 |
| Msa0663230 | MtrunA17_Chr4g0002801 | 35.052 | 194 | 92 | 5 | 12 | 186 | 131 | 309 | 1.32e-21 | 94.4 |
| Msa0663230 | MtrunA17_Chr5g0400621 | 42.708 | 192 | 80 | 5 | 197 | 370 | 147 | 326 | 5.18e-33 | 125 |
| Msa0663230 | MtrunA17_Chr5g0400621 | 44.882 | 127 | 60 | 2 | 70 | 186 | 182 | 308 | 5.95e-21 | 92.4 |
| Msa0663230 | MtrunA17_Chr4g0002781 | 44.848 | 165 | 77 | 3 | 222 | 372 | 184 | 348 | 1.48e-32 | 125 |
| Msa0663230 | MtrunA17_Chr4g0002781 | 40.816 | 147 | 69 | 4 | 56 | 186 | 184 | 328 | 3.37e-22 | 96.3 |
| Msa0663230 | MtrunA17_Chr2g0333641 | 43.030 | 165 | 79 | 3 | 223 | 375 | 148 | 309 | 1.89e-29 | 115 |
| Msa0663230 | MtrunA17_Chr2g0333641 | 40.845 | 142 | 69 | 3 | 57 | 186 | 148 | 286 | 1.72e-18 | 85.1 |
| Msa0663230 | MtrunA17_Chr8g0336681 | 42.683 | 164 | 76 | 3 | 224 | 369 | 168 | 331 | 2.86e-28 | 113 |
| Msa0663230 | MtrunA17_Chr8g0336681 | 38.411 | 151 | 67 | 4 | 58 | 186 | 168 | 314 | 2.66e-19 | 88.2 |
| Msa0663230 | MtrunA17_Chr2g0333611 | 45.223 | 157 | 77 | 5 | 222 | 369 | 55 | 211 | 2.23e-27 | 107 |
| Msa0663230 | MtrunA17_Chr2g0333611 | 43.357 | 143 | 66 | 6 | 56 | 186 | 55 | 194 | 2.30e-21 | 91.3 |
| Msa0663230 | MtrunA17_Chr5g0400661 | 40.230 | 174 | 80 | 3 | 223 | 372 | 160 | 333 | 6.38e-27 | 109 |
| Msa0663230 | MtrunA17_Chr5g0400661 | 41.304 | 138 | 58 | 3 | 71 | 185 | 175 | 312 | 2.85e-20 | 90.5 |
| Msa0663230 | MtrunA17_Chr4g0054581 | 42.236 | 161 | 61 | 4 | 234 | 371 | 221 | 372 | 1.92e-26 | 108 |
| Msa0663230 | MtrunA17_Chr4g0054581 | 36.691 | 139 | 56 | 5 | 70 | 185 | 223 | 352 | 1.48e-14 | 74.3 |
| Msa0663230 | MtrunA17_Chr4g0054621 | 40.288 | 139 | 78 | 3 | 237 | 371 | 198 | 335 | 1.38e-24 | 102 |
| Msa0663230 | MtrunA17_Chr4g0054621 | 34.454 | 119 | 73 | 2 | 71 | 185 | 198 | 315 | 1.63e-12 | 67.8 |
| Msa0663230 | MtrunA17_Chr2g0280161 | 37.195 | 164 | 91 | 3 | 223 | 374 | 188 | 351 | 7.80e-24 | 100 |
| Msa0663230 | MtrunA17_Chr2g0280161 | 38.583 | 127 | 67 | 2 | 71 | 186 | 203 | 329 | 2.01e-18 | 85.5 |
| Msa0663230 | MtrunA17_Chr4g0033391 | 39.216 | 153 | 72 | 2 | 234 | 372 | 170 | 315 | 8.18e-24 | 100 |
| Msa0663230 | MtrunA17_Chr4g0033391 | 34.899 | 149 | 75 | 3 | 53 | 186 | 154 | 295 | 6.61e-16 | 77.8 |
| Msa0663230 | MtrunA17_Chr4g0054561 | 39.623 | 159 | 87 | 6 | 223 | 372 | 166 | 324 | 7.50e-23 | 97.8 |
| Msa0663230 | MtrunA17_Chr4g0054561 | 39.200 | 125 | 68 | 4 | 70 | 186 | 180 | 304 | 5.04e-14 | 72.4 |
| Msa0663230 | MtrunA17_Chr4g0033291 | 37.838 | 148 | 81 | 2 | 234 | 372 | 178 | 323 | 1.08e-22 | 97.4 |
| Msa0663230 | MtrunA17_Chr4g0033291 | 32.639 | 144 | 85 | 3 | 53 | 186 | 162 | 303 | 4.24e-15 | 75.5 |
| Msa0663230 | MtrunA17_Chr2g0307131 | 38.961 | 154 | 68 | 3 | 234 | 369 | 202 | 347 | 1.17e-21 | 95.1 |
| Msa0663230 | MtrunA17_Chr2g0307131 | 36.567 | 134 | 61 | 3 | 70 | 186 | 204 | 330 | 2.32e-14 | 73.6 |
| Msa0663230 | MtrunA17_Chr2g0333541 | 37.952 | 166 | 88 | 5 | 224 | 375 | 106 | 270 | 1.26e-21 | 93.6 |
| Msa0663230 | MtrunA17_Chr2g0333541 | 33.775 | 151 | 85 | 4 | 50 | 186 | 98 | 247 | 1.38e-13 | 70.5 |
| Msa0663230 | MtrunA17_Chr2g0307141 | 37.662 | 154 | 70 | 3 | 234 | 369 | 206 | 351 | 2.85e-21 | 94.0 |
| Msa0663230 | MtrunA17_Chr2g0307141 | 34.328 | 134 | 64 | 3 | 70 | 186 | 208 | 334 | 3.97e-13 | 70.1 |
| Msa0663230 | MtrunA17_Chr4g0049331 | 35.758 | 165 | 91 | 4 | 223 | 374 | 146 | 308 | 3.32e-21 | 92.8 |
| Msa0663230 | MtrunA17_Chr4g0049331 | 35.433 | 127 | 72 | 2 | 70 | 186 | 160 | 286 | 3.22e-16 | 78.6 |
| Msa0663230 | MtrunA17_Chr5g0400641 | 38.060 | 134 | 73 | 2 | 236 | 359 | 23 | 156 | 5.09e-21 | 89.0 |
| Msa0663230 | MtrunA17_Chr5g0400641 | 38.583 | 127 | 68 | 2 | 70 | 186 | 23 | 149 | 3.44e-19 | 84.0 |
| Msa0663230 | MtrunA17_Chr7g0249811 | 37.580 | 157 | 82 | 3 | 222 | 369 | 175 | 324 | 2.42e-20 | 90.9 |
| Msa0663230 | MtrunA17_Chr4g0054551 | 38.365 | 159 | 89 | 6 | 223 | 372 | 166 | 324 | 2.59e-20 | 90.9 |
| Msa0663230 | MtrunA17_Chr4g0054551 | 38.400 | 125 | 69 | 4 | 70 | 186 | 180 | 304 | 1.15e-12 | 68.2 |
| Msa0663230 | MtrunA17_Chr4g0033281 | 37.241 | 145 | 85 | 1 | 234 | 372 | 176 | 320 | 5.80e-20 | 89.7 |
| Msa0663230 | MtrunA17_Chr4g0033281 | 34.043 | 141 | 86 | 2 | 53 | 186 | 160 | 300 | 1.09e-13 | 71.2 |
| Msa0663230 | MtrunA17_Chr6g0468491 | 36.667 | 150 | 79 | 3 | 234 | 370 | 160 | 306 | 7.15e-20 | 89.4 |
| Msa0663230 | MtrunA17_Chr6g0468491 | 36.691 | 139 | 62 | 5 | 70 | 191 | 162 | 291 | 3.82e-13 | 69.7 |
| Msa0663230 | MtrunA17_Chr5g0400671 | 29.744 | 195 | 120 | 3 | 198 | 375 | 131 | 325 | 3.01e-19 | 87.8 |
| Msa0663230 | MtrunA17_Chr5g0400671 | 39.200 | 125 | 67 | 3 | 70 | 186 | 179 | 302 | 1.56e-17 | 82.8 |
| Msa0663230 | MtrunA17_Chr4g0054571 | 37.952 | 166 | 85 | 5 | 223 | 370 | 161 | 326 | 4.62e-16 | 78.6 |
| Msa0663230 | MtrunA17_Chr4g0054571 | 35.811 | 148 | 77 | 5 | 57 | 186 | 161 | 308 | 6.85e-12 | 65.9 |
| Msa0663230 | MtrunA17_Chr7g0225901 | 36.090 | 133 | 61 | 4 | 71 | 186 | 114 | 239 | 1.19e-15 | 76.3 |
| Msa0663230 | MtrunA17_Chr7g0225901 | 35.036 | 137 | 65 | 4 | 234 | 353 | 111 | 240 | 2.82e-14 | 72.0 |
| Msa0663230 | MtrunA17_Chr6g0468461 | 29.825 | 171 | 84 | 4 | 45 | 186 | 147 | 310 | 1.97e-12 | 67.8 |
| Msa0663230 | MtrunA17_Chr6g0468461 | 32.867 | 143 | 83 | 3 | 234 | 373 | 196 | 328 | 1.69e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0663230 | AT4G37850.2 | 40.244 | 164 | 84 | 5 | 223 | 373 | 163 | 325 | 8.60e-24 | 100 |
| Msa0663230 | AT4G37850.2 | 40.972 | 144 | 71 | 5 | 57 | 187 | 163 | 305 | 1.45e-21 | 94.7 |
| Msa0663230 | AT4G37850.1 | 40.244 | 164 | 84 | 5 | 223 | 373 | 163 | 325 | 8.60e-24 | 100 |
| Msa0663230 | AT4G37850.1 | 40.972 | 144 | 71 | 5 | 57 | 187 | 163 | 305 | 1.45e-21 | 94.7 |
| Msa0663230 | AT2G22770.1 | 35.556 | 180 | 86 | 4 | 222 | 373 | 142 | 319 | 3.53e-21 | 93.6 |
| Msa0663230 | AT2G22770.1 | 35.032 | 157 | 76 | 3 | 56 | 186 | 142 | 298 | 9.93e-16 | 77.8 |
| Msa0663230 | AT2G22760.1 | 36.364 | 165 | 90 | 6 | 223 | 372 | 130 | 294 | 5.16e-21 | 92.4 |
| Msa0663230 | AT2G22760.1 | 38.462 | 130 | 67 | 3 | 70 | 186 | 144 | 273 | 5.07e-19 | 87.0 |
| Msa0663230 | AT2G22760.2 | 37.681 | 138 | 73 | 3 | 70 | 194 | 144 | 281 | 3.60e-20 | 90.1 |
| Msa0663230 | AT2G22760.2 | 37.241 | 145 | 77 | 5 | 223 | 353 | 130 | 274 | 3.43e-17 | 81.3 |
| Msa0663230 | AT2G22750.2 | 34.731 | 167 | 92 | 4 | 223 | 373 | 137 | 302 | 1.52e-15 | 77.0 |
| Msa0663230 | AT2G22750.2 | 36.054 | 147 | 77 | 4 | 57 | 187 | 137 | 282 | 1.15e-12 | 68.6 |
| Msa0663230 | AT2G22750.3 | 34.731 | 167 | 92 | 4 | 223 | 373 | 165 | 330 | 1.71e-15 | 77.0 |
| Msa0663230 | AT2G22750.3 | 36.054 | 147 | 77 | 4 | 57 | 187 | 165 | 310 | 1.42e-12 | 68.6 |
| Msa0663230 | AT2G22750.5 | 34.731 | 167 | 92 | 4 | 223 | 373 | 161 | 326 | 1.99e-15 | 77.0 |
| Msa0663230 | AT2G22750.5 | 36.054 | 147 | 77 | 4 | 57 | 187 | 161 | 306 | 1.59e-12 | 68.2 |
| Msa0663230 | AT2G22750.1 | 34.731 | 167 | 91 | 5 | 223 | 373 | 137 | 301 | 3.07e-14 | 73.2 |
| Msa0663230 | AT2G22750.1 | 36.301 | 146 | 76 | 4 | 57 | 186 | 137 | 281 | 1.29e-12 | 68.2 |
| Msa0663230 | AT2G22750.4 | 34.731 | 167 | 91 | 5 | 223 | 373 | 165 | 329 | 3.64e-14 | 73.2 |
| Msa0663230 | AT2G22750.4 | 36.301 | 146 | 76 | 4 | 57 | 186 | 165 | 309 | 1.81e-12 | 68.2 |
Find 72 sgRNAs with CRISPR-Local
Find 513 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAGTAGTGTCTTGCAATT+TGG | 0.242766 | 4_4:-1911159 | Msa0663230:CDS |
| AATAGTAGTGTCTTGCAATT+TGG | 0.242766 | 4_4:-1918336 | Msa0663230:CDS |
| ATTACCTTACATAATATTCT+TGG | 0.253091 | 4_4:-1921568 | Msa0663230:five_prime_UTR |
| TTGGCCTTCTAATTCTGATT+TGG | 0.292992 | 4_4:-1921482 | Msa0663230:intron |
| CTATTATATAACGTTAGTTT+TGG | 0.314460 | 4_4:+1921544 | None:intergenic |
| GAGAAGGGTGGTTGAGGTTG+TGG | 0.332790 | 4_4:+1921662 | None:intergenic |
| GTCCATTGTGAGAAACAAAA+TGG | 0.346102 | 4_4:-1911234 | Msa0663230:CDS |
| TTTACCAAATCAGAATTAGA+AGG | 0.359501 | 4_4:+1921478 | None:intergenic |
| GACACTCTTGCTTTGACCTC+TGG | 0.373738 | 4_4:+1911279 | None:intergenic |
| AAGGAACTTTCAGATGTCAT+AGG | 0.393216 | 4_4:-1912904 | Msa0663230:CDS |
| TGGAGGAGTCGGGAGAAAAT+TGG | 0.405975 | 4_4:-1921501 | Msa0663230:CDS |
| CACAAAATTAATGGAGGAGT+CGG | 0.417820 | 4_4:-1921512 | Msa0663230:exon |
| ACGAACCTTCTTTAAGCCTA+TGG | 0.424699 | 4_4:+1921186 | None:intergenic |
| GAGTAATATAATGAGTACTA+TGG | 0.431589 | 4_4:+1921689 | None:intergenic |
| GTCCAATGTGAGGAACAAAA+TGG | 0.442895 | 4_4:-1918411 | Msa0663230:CDS |
| TGTGATGATGAGGATCAAAT+TGG | 0.444244 | 4_4:-1912982 | Msa0663230:CDS |
| TGGTCCAAGAATATTATGTA+AGG | 0.448009 | 4_4:+1921564 | None:intergenic |
| AAACAAGAGAAGGGTGGTTG+AGG | 0.454672 | 4_4:+1921656 | None:intergenic |
| GACACTCTTGCTTTAACCTC+TGG | 0.454730 | 4_4:+1918456 | None:intergenic |
| GATGGACGACACTTCGATCC+TGG | 0.456139 | 4_4:-1911442 | Msa0663230:CDS |
| CATAGTCTTTAGCTTTCTCC+AGG | 0.461758 | 4_4:+1911424 | None:intergenic |
| ATTATGTACCTTAGCAATGA+TGG | 0.465279 | 4_4:+1911116 | None:intergenic |
| AGATTCTCCATCTTTAAGAA+TGG | 0.468345 | 4_4:+1921330 | None:intergenic |
| CCAACATTTGTACTAACAAA+AGG | 0.472387 | 4_4:-1918530 | Msa0663230:CDS |
| CAAACATTTGTAGCAACAAA+AGG | 0.474862 | 4_4:-1911353 | Msa0663230:CDS |
| GAAAAGAAGAAAACAAGAGA+AGG | 0.477030 | 4_4:+1921646 | None:intergenic |
| GCATCCCTTTGTATCATCTG+TGG | 0.493551 | 4_4:+1912954 | None:intergenic |
| GTACTCATCTGAATTCACTT+TGG | 0.493682 | 4_4:+1911329 | None:intergenic |
| CATCCCTTTGTATCATCTGT+GGG | 0.500625 | 4_4:+1912955 | None:intergenic |
| TGAGGAACAAAATGGTATCC+TGG | 0.505887 | 4_4:-1918403 | Msa0663230:CDS |
| GATGAAGCCATTCTTAAAGA+TGG | 0.508496 | 4_4:-1921337 | Msa0663230:CDS |
| ACAAAATTAATGGAGGAGTC+GGG | 0.511241 | 4_4:-1921511 | Msa0663230:exon |
| GTAGTAATTTGAACTCACTT+TGG | 0.517586 | 4_4:+1918506 | None:intergenic |
| AGACGCCATAGGCTTAAAGA+AGG | 0.520059 | 4_4:-1921191 | Msa0663230:intron |
| AGATGTCATAGGCTTAAAGA+AGG | 0.521799 | 4_4:-1912893 | Msa0663230:intron |
| GGAGATCACAGAGATGTTGA+AGG | 0.529175 | 4_4:-1921221 | Msa0663230:CDS |
| AGAGAGCTAGAACAAGTAGC+TGG | 0.532657 | 4_4:-1911378 | Msa0663230:CDS |
| AAAAGAAGAAAACAAGAGAA+GGG | 0.535404 | 4_4:+1921647 | None:intergenic |
| GGAGATAACAGAGAGATTGA+AGG | 0.538887 | 4_4:-1912923 | Msa0663230:CDS |
| AGAGAGCTAGAACAAGAAGC+TGG | 0.540149 | 4_4:-1918555 | Msa0663230:CDS |
| AGTTCAAATTACTACAATTG+TGG | 0.544671 | 4_4:-1918498 | Msa0663230:CDS |
| AAGGAACTTTCAGACGCCAT+AGG | 0.546154 | 4_4:-1921202 | Msa0663230:CDS |
| TATACAATGCAGATGGGTGA+TGG | 0.560778 | 4_4:-1910591 | Msa0663230:intron |
| GAAAGTATAGTGTGGATAAG+TGG | 0.563513 | 4_4:+1921604 | None:intergenic |
| GGAGAAAGCTAAAGACTATG+TGG | 0.566262 | 4_4:-1911421 | Msa0663230:CDS |
| TACAAAGGAAAATAATGAGA+AGG | 0.566751 | 4_4:-1921242 | Msa0663230:CDS |
| AAGGGTGGTTGAGGTTGTGG+AGG | 0.572193 | 4_4:+1921665 | None:intergenic |
| AATTCAGATGAGTACAATTG+TGG | 0.580271 | 4_4:-1911321 | Msa0663230:CDS |
| ATTAGTGAAAACTCTGAGAA+TGG | 0.589791 | 4_4:-1910547 | Msa0663230:CDS |
| AAGATGAAGATTTGCAAGGT+GGG | 0.590601 | 4_4:+1911191 | None:intergenic |
| GATCCCACAGATGATACAAA+GGG | 0.591275 | 4_4:-1912958 | Msa0663230:CDS |
| TGACATCACCATCATTGCTA+AGG | 0.597498 | 4_4:-1911124 | Msa0663230:intron |
| TGACATCACCATCGTTGCCA+AGG | 0.604175 | 4_4:-1918301 | Msa0663230:intron |
| TACAAAGGGATGCAATGAGA+AGG | 0.614231 | 4_4:-1912944 | Msa0663230:CDS |
| TGGCAACGATGGTGATGTCA+AGG | 0.614449 | 4_4:+1918304 | None:intergenic |
| CTGAAAGATGAAGATTTGCA+AGG | 0.619476 | 4_4:+1911187 | None:intergenic |
| AGAAGAAAACAAGAGAAGGG+TGG | 0.625567 | 4_4:+1921650 | None:intergenic |
| AGATCCCACAGATGATACAA+AGG | 0.632403 | 4_4:-1912959 | Msa0663230:CDS |
| TGAATCTGTGTGTGATGATG+AGG | 0.633660 | 4_4:-1912992 | Msa0663230:CDS |
| TATTATGTAAGGTAATTGTG+TGG | 0.636240 | 4_4:+1921575 | None:intergenic |
| ATCTGTATGTGATGATGATG+AGG | 0.647394 | 4_4:-1921305 | Msa0663230:CDS |
| AAAGATGAAGATTTGCAAGG+TGG | 0.649158 | 4_4:+1911190 | None:intergenic |
| GGAAGAATGAAAGTATAGTG+TGG | 0.650077 | 4_4:+1921596 | None:intergenic |
| TAGCAATGATGGTGATGTCA+AGG | 0.650596 | 4_4:+1911127 | None:intergenic |
| AAGTGATATTACTCTTCCAG+AGG | 0.654563 | 4_4:-1918472 | Msa0663230:CDS |
| AATGATGGTGATGTCAAGGA+TGG | 0.654787 | 4_4:+1911131 | None:intergenic |
| GGCAACGATGGTGATGTCAA+GGG | 0.669209 | 4_4:+1918305 | None:intergenic |
| TATATGTACCTTGGCAACGA+TGG | 0.684253 | 4_4:+1918293 | None:intergenic |
| AAGTGATAATACTCTTCCAG+AGG | 0.687795 | 4_4:-1911295 | Msa0663230:CDS |
| AGATCCCACAGATAATACAA+AGG | 0.692675 | 4_4:-1921257 | Msa0663230:CDS |
| TCTTGTCATAGTCCAATGTG+AGG | 0.694778 | 4_4:-1918421 | Msa0663230:CDS |
| AACGATGGTGATGTCAAGGG+TGG | 0.703274 | 4_4:+1918308 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTATAATAATATAATA+TGG | - | chr4_4:1916980-1916999 | Msa0663230:intron | 0.0% |
| !! | ATCATATGTATTATATTAAT+AGG | + | chr4_4:1910716-1910735 | None:intergenic | 10.0% |
| !!! | ATGTTTACTATATTTAATTT+AGG | + | chr4_4:1911017-1911036 | None:intergenic | 10.0% |
| !! | CATATTTATATTTAAATGAA+CGG | - | chr4_4:1911034-1911053 | Msa0663230:intron | 10.0% |
| !!! | TAATTTTTTTAGTATAAAGA+AGG | + | chr4_4:1911166-1911185 | None:intergenic | 10.0% |
| !!! | TTATTATTTTTTTTAAAACC+AGG | - | chr4_4:1911983-1912002 | Msa0663230:intron | 10.0% |
| !!! | TATTAAGATTATGTTTTTTA+TGG | - | chr4_4:1912045-1912064 | Msa0663230:intron | 10.0% |
| !!! | ATTAAGATTATGTTTTTTAT+GGG | - | chr4_4:1912046-1912065 | Msa0663230:intron | 10.0% |
| !!! | TAATTTTGTAACAAAAAATT+CGG | - | chr4_4:1912102-1912121 | Msa0663230:intron | 10.0% |
| !! | TTTCATTAATTTATAATTTG+TGG | - | chr4_4:1912673-1912692 | Msa0663230:intron | 10.0% |
| !!! | TTCATTAATTTATAATTTGT+GGG | - | chr4_4:1912674-1912693 | Msa0663230:intron | 10.0% |
| !! | TTCTGAATAATTATATAAAA+AGG | - | chr4_4:1913325-1913344 | Msa0663230:intron | 10.0% |
| !! | ATTATAATGTAAATCTAAAA+TGG | - | chr4_4:1914234-1914253 | Msa0663230:intron | 10.0% |
| !! | TAATTAATATTTATGAACAA+AGG | + | chr4_4:1914564-1914583 | None:intergenic | 10.0% |
| !!! | TGTAAAAAACATTATTTTAA+TGG | + | chr4_4:1915417-1915436 | None:intergenic | 10.0% |
| !! | TACATAATAAAATTTATTCA+TGG | - | chr4_4:1916218-1916237 | Msa0663230:intron | 10.0% |
| !! | TATAAAAATAATTAGTATCA+TGG | - | chr4_4:1916433-1916452 | Msa0663230:intron | 10.0% |
| !! | GAATAATATTAATGATATAA+CGG | - | chr4_4:1917511-1917530 | Msa0663230:intron | 10.0% |
| !! | ACATATTACAAATTAAATTT+AGG | - | chr4_4:1919309-1919328 | Msa0663230:intron | 10.0% |
| !! | AAAATTAAAGAGAAAATAAA+TGG | + | chr4_4:1919756-1919775 | None:intergenic | 10.0% |
| !! | TATATATGTATGTATTTATA+TGG | - | chr4_4:1920554-1920573 | Msa0663230:intron | 10.0% |
| !!! | TAAATTCTAAATATGAATTT+TGG | + | chr4_4:1921066-1921085 | None:intergenic | 10.0% |
| !! | ATTAAATAGTAAAAATTCAA+GGG | + | chr4_4:1921468-1921487 | None:intergenic | 10.0% |
| !! | AATTAAATAGTAAAAATTCA+AGG | + | chr4_4:1921469-1921488 | None:intergenic | 10.0% |
| !!! | CATAATTTTCACAAAATTAA+TGG | - | chr4_4:1910628-1910647 | Msa0663230:intron | 15.0% |
| !! | CTTAACGAAATTAATAAATA+AGG | + | chr4_4:1911548-1911567 | None:intergenic | 15.0% |
| !!! | AAATTTAGAGTCAAAATTTT+AGG | + | chr4_4:1911636-1911655 | None:intergenic | 15.0% |
| !!! | TATTTAAATTTGTTACAAAC+AGG | - | chr4_4:1911896-1911915 | Msa0663230:intron | 15.0% |
| !!! | ATTTAAATTTGTTACAAACA+GGG | - | chr4_4:1911897-1911916 | Msa0663230:intron | 15.0% |
| !! | AACAAAACCTAAAAAAATTA+GGG | + | chr4_4:1912256-1912275 | None:intergenic | 15.0% |
| !! | TAACAAAACCTAAAAAAATT+AGG | + | chr4_4:1912257-1912276 | None:intergenic | 15.0% |
| !!! | ATAATTATGTTAGTTGTTTT+GGG | - | chr4_4:1912463-1912482 | Msa0663230:intron | 15.0% |
| !!! | TCATTAATTTATAATTTGTG+GGG | - | chr4_4:1912675-1912694 | Msa0663230:intron | 15.0% |
| !! | ATGACATTAAAATTATAAGT+TGG | - | chr4_4:1912807-1912826 | Msa0663230:intron | 15.0% |
| !! | TGACATTAAAATTATAAGTT+GGG | - | chr4_4:1912808-1912827 | Msa0663230:intron | 15.0% |
| !!! | TTCTTTTATTATCTATGTAA+TGG | - | chr4_4:1912984-1913003 | Msa0663230:CDS | 15.0% |
| !!! | TCCAATTAATTTTTTGAAAA+GGG | + | chr4_4:1913118-1913137 | None:intergenic | 15.0% |
| !!! | ATCCAATTAATTTTTTGAAA+AGG | + | chr4_4:1913119-1913138 | None:intergenic | 15.0% |
| !! | TATATGCACTTATAAATAAT+AGG | - | chr4_4:1913467-1913486 | Msa0663230:intron | 15.0% |
| !! | ATATGCACTTATAAATAATA+GGG | - | chr4_4:1913468-1913487 | Msa0663230:intron | 15.0% |
| !! | ATTAATATGTCAATGTAATT+TGG | - | chr4_4:1914296-1914315 | Msa0663230:intron | 15.0% |
| !!! | ATGGAATAAGATTTTTATAA+TGG | + | chr4_4:1914393-1914412 | None:intergenic | 15.0% |
| !! | AACAAAAAATCAATCTAAAA+TGG | + | chr4_4:1914412-1914431 | None:intergenic | 15.0% |
| !! | TAATTATAGATCTAAGAATT+AGG | - | chr4_4:1915028-1915047 | Msa0663230:intron | 15.0% |
| !!! | ATTCTAAACATATTTTCATT+CGG | - | chr4_4:1915207-1915226 | Msa0663230:intron | 15.0% |
| !! | TTATTATGTAAAAAGGAAAA+AGG | + | chr4_4:1916208-1916227 | None:intergenic | 15.0% |
| !!! | ATTTTCATAACAAATGAATT+GGG | + | chr4_4:1916334-1916353 | None:intergenic | 15.0% |
| !!! | TATTTTCATAACAAATGAAT+TGG | + | chr4_4:1916335-1916354 | None:intergenic | 15.0% |
| !!! | TTTTATATTTAGTTGGAATT+GGG | + | chr4_4:1916420-1916439 | None:intergenic | 15.0% |
| !!! | TTTTTATATTTAGTTGGAAT+TGG | + | chr4_4:1916421-1916440 | None:intergenic | 15.0% |
| !!! | TTTTTGTTGTGAATAATAAT+AGG | + | chr4_4:1916756-1916775 | None:intergenic | 15.0% |
| !!! | ACAAAAATCTCTATTTTTTT+TGG | - | chr4_4:1916769-1916788 | Msa0663230:intron | 15.0% |
| !!! | TAAATATTAGGCTTTTTTAA+GGG | + | chr4_4:1916907-1916926 | None:intergenic | 15.0% |
| !!! | ATAAATATTAGGCTTTTTTA+AGG | + | chr4_4:1916908-1916927 | None:intergenic | 15.0% |
| !! | TAAAACTATGAATTATTGAA+CGG | - | chr4_4:1917456-1917475 | Msa0663230:intron | 15.0% |
| !! | TTGGTAAATATATTTAGTTA+TGG | - | chr4_4:1917771-1917790 | Msa0663230:intron | 15.0% |
| !!! | ACTTTTTCTTTGTAAATTTA+TGG | + | chr4_4:1918381-1918400 | None:intergenic | 15.0% |
| !! | TAAATTTACAAAGAAAAAGT+AGG | - | chr4_4:1918381-1918400 | Msa0663230:CDS | 15.0% |
| !!! | CATAATTTTCACAAAATTAA+TGG | - | chr4_4:1910628-1910647 | Msa0663230:intron | 15.0% |
| !! | TAGCATATGTATTAAATAAT+AGG | + | chr4_4:1919020-1919039 | None:intergenic | 15.0% |
| !! | AGTATATAATACTAAATGAA+TGG | - | chr4_4:1919332-1919351 | Msa0663230:intron | 15.0% |
| !! | TCAACAAAAAATAATGTATT+TGG | - | chr4_4:1919595-1919614 | Msa0663230:intron | 15.0% |
| !!! | TTCTAAAATGTAAGTAAAAA+TGG | + | chr4_4:1919658-1919677 | None:intergenic | 15.0% |
| !! | TACTTAATTAAGTTTACTTA+TGG | - | chr4_4:1919687-1919706 | Msa0663230:intron | 15.0% |
| !!! | ATTTTTCGAAAATTCAATAA+TGG | - | chr4_4:1920155-1920174 | Msa0663230:intron | 15.0% |
| !! | TTTGTAAAAAATAAAGAAGT+AGG | - | chr4_4:1920259-1920278 | Msa0663230:intron | 15.0% |
| !! | TTGTAAAAAATAAAGAAGTA+GGG | - | chr4_4:1920260-1920279 | Msa0663230:intron | 15.0% |
| !!! | ATATCTAACATTTTTTCTAA+CGG | + | chr4_4:1921231-1921250 | None:intergenic | 15.0% |
| !! | TTAGAAAAAATGTTAGATAT+AGG | - | chr4_4:1921231-1921250 | Msa0663230:CDS | 15.0% |
| !! | TAGAAAAAATGTTAGATATA+GGG | - | chr4_4:1921232-1921251 | Msa0663230:CDS | 15.0% |
| !!! | TTACTAAAATATCTGAATTT+TGG | - | chr4_4:1921272-1921291 | Msa0663230:CDS | 15.0% |
| !! | ATTACCTTACATAATATTCT+TGG | - | chr4_4:1910581-1910600 | Msa0663230:CDS | 20.0% |
| !!! | CTATTATATAACGTTAGTTT+TGG | + | chr4_4:1910608-1910627 | None:intergenic | 20.0% |
| !!! | AATTTTCACAAAATTAATGG+AGG | - | chr4_4:1910631-1910650 | Msa0663230:intron | 20.0% |
| !!! | TGTTTTTTGCATTTATTCAT+AGG | - | chr4_4:1910781-1910800 | Msa0663230:intron | 20.0% |
| !!! | TTAAATTTAACTTAAGAGTG+TGG | - | chr4_4:1911466-1911485 | Msa0663230:intron | 20.0% |
| !! | TAACTTTCAAAAATAGTGTT+TGG | + | chr4_4:1911774-1911793 | None:intergenic | 20.0% |
| !!! | TTAGATTTTTTTTTAGATCC+TGG | + | chr4_4:1912004-1912023 | None:intergenic | 20.0% |
| !!! | AATTAACTAGTTTTTTTACC+CGG | + | chr4_4:1912184-1912203 | None:intergenic | 20.0% |
| !!! | AAAAAATTAGGGTTAGTATT+AGG | + | chr4_4:1912245-1912264 | None:intergenic | 20.0% |
| !!! | ATACTAACCCTAATTTTTTT+AGG | - | chr4_4:1912246-1912265 | Msa0663230:intron | 20.0% |
| !!! | TTGCTTGTTAAAATATTTGA+GGG | + | chr4_4:1912299-1912318 | None:intergenic | 20.0% |
| !! | TACCATCAATCTAATTTATT+CGG | - | chr4_4:1912438-1912457 | Msa0663230:intron | 20.0% |
| !! | CAAAACAACTAACATAATTA+TGG | + | chr4_4:1912464-1912483 | None:intergenic | 20.0% |
| !!! | CATAATTATGTTAGTTGTTT+TGG | - | chr4_4:1912462-1912481 | Msa0663230:intron | 20.0% |
| !!! | TTTTTTAACGAAAGAGATTT+TGG | + | chr4_4:1912709-1912728 | None:intergenic | 20.0% |
| !! | TCTCTTTCGTTAAAAAATTA+TGG | - | chr4_4:1912712-1912731 | Msa0663230:intron | 20.0% |
| !! | AAAGAATTAAGAACATACAA+TGG | + | chr4_4:1912970-1912989 | None:intergenic | 20.0% |
| !!! | TCCCTTTTCAAAAAATTAAT+TGG | - | chr4_4:1913114-1913133 | Msa0663230:intron | 20.0% |
| !!! | GACAATGATTTTTTTTTCAT+TGG | + | chr4_4:1913206-1913225 | None:intergenic | 20.0% |
| !! | ATGAAAAAAAAATCATTGTC+AGG | - | chr4_4:1913206-1913225 | Msa0663230:intron | 20.0% |
| !! | TGAAAAAAAAATCATTGTCA+GGG | - | chr4_4:1913207-1913226 | Msa0663230:intron | 20.0% |
| !!! | TATATTAATTTGTCAACGTA+AGG | - | chr4_4:1914202-1914221 | Msa0663230:intron | 20.0% |
| !! | CACAAAAAATCAATCTAAAA+TGG | - | chr4_4:1914339-1914358 | Msa0663230:intron | 20.0% |
| !!! | TAATTAATTTCTTATTGGCT+AGG | - | chr4_4:1914578-1914597 | Msa0663230:intron | 20.0% |
| !!! | AATTAATTTCTTATTGGCTA+GGG | - | chr4_4:1914579-1914598 | Msa0663230:intron | 20.0% |
| !! | AAATACATGATAAAATGTCA+AGG | + | chr4_4:1914636-1914655 | None:intergenic | 20.0% |
| !! | AAAAAATTAAATTCTGCAGA+TGG | - | chr4_4:1914702-1914721 | Msa0663230:intron | 20.0% |
| !!! | CATTTTGCAATTATATTTCT+TGG | - | chr4_4:1915142-1915161 | Msa0663230:intron | 20.0% |
| !!! | AAATATGTTTAGAATTCAGT+AGG | + | chr4_4:1915202-1915221 | None:intergenic | 20.0% |
| !! | CATTATTAACATGAAATAAG+TGG | - | chr4_4:1915305-1915324 | Msa0663230:intron | 20.0% |
| !!! | TTTTAGAAGAAGTTCATAAA+AGG | - | chr4_4:1915710-1915729 | Msa0663230:intron | 20.0% |
| !! | TTTAGAAGAAGTTCATAAAA+GGG | - | chr4_4:1915711-1915730 | Msa0663230:intron | 20.0% |
| !! | AACATGTTAAATGAATCAAT+TGG | - | chr4_4:1915870-1915889 | Msa0663230:intron | 20.0% |
| !!! | GAAAAAGTATATTAAGCTAT+GGG | + | chr4_4:1916161-1916180 | None:intergenic | 20.0% |
| !!! | AGAAAAAGTATATTAAGCTA+TGG | + | chr4_4:1916162-1916181 | None:intergenic | 20.0% |
| !!! | ACTAAACATCAAGATTTTTT+TGG | + | chr4_4:1916824-1916843 | None:intergenic | 20.0% |
| !!! | AAATATTAGGCTTTTTTAAG+GGG | + | chr4_4:1916906-1916925 | None:intergenic | 20.0% |
| !! | GAATTTATCCAATTTATTTG+AGG | + | chr4_4:1917050-1917069 | None:intergenic | 20.0% |
| !! | TAATGAAAATATTCGAAGTA+GGG | + | chr4_4:1917107-1917126 | None:intergenic | 20.0% |
| !! | TTAATGAAAATATTCGAAGT+AGG | + | chr4_4:1917108-1917127 | None:intergenic | 20.0% |
| !! | TAATATTAATGATATAACGG+TGG | - | chr4_4:1917514-1917533 | Msa0663230:intron | 20.0% |
| !!! | AACTGTACTTTTTTTTTTGA+CGG | - | chr4_4:1917594-1917613 | Msa0663230:intron | 20.0% |
| !!! | ACTCATTAATTATTTTTGAG+AGG | + | chr4_4:1917712-1917731 | None:intergenic | 20.0% |
| !! | ATAAAAAAAACCTAAAACGT+TGG | - | chr4_4:1917752-1917771 | Msa0663230:intron | 20.0% |
| !!! | AATATATTTACCAACGTTTT+AGG | + | chr4_4:1917765-1917784 | None:intergenic | 20.0% |
| !! | AATAATAAGAGCAGATAAAT+AGG | + | chr4_4:1917838-1917857 | None:intergenic | 20.0% |
| !! | ACATATTAAGAAACCAATTA+AGG | - | chr4_4:1917878-1917897 | Msa0663230:intron | 20.0% |
| !! | TGAAATAATTCTACCTTAAT+TGG | + | chr4_4:1917894-1917913 | None:intergenic | 20.0% |
| !!! | TTTTTTTATATACTCTCATG+AGG | + | chr4_4:1917933-1917952 | None:intergenic | 20.0% |
| !! | TCAATCTTAACTAATTAAGT+TGG | - | chr4_4:1918164-1918183 | Msa0663230:intron | 20.0% |
| !!! | TTCTATATTCCTTTTTTTAG+GGG | + | chr4_4:1918201-1918220 | None:intergenic | 20.0% |
| !!! | GTTCTATATTCCTTTTTTTA+GGG | + | chr4_4:1918202-1918221 | None:intergenic | 20.0% |
| !!! | TGTTCTATATTCCTTTTTTT+AGG | + | chr4_4:1918203-1918222 | None:intergenic | 20.0% |
| !! | AAACACCTTATAAAAAATTG+AGG | - | chr4_4:1918312-1918331 | Msa0663230:CDS | 20.0% |
| !!! | TGTTATTTGAATAACCATTT+GGG | - | chr4_4:1918337-1918356 | Msa0663230:CDS | 20.0% |
| !! | TCACAAAAATTGTTACAAAA+TGG | - | chr4_4:1918474-1918493 | Msa0663230:CDS | 20.0% |
| !!! | AGTCTTTCTAAAAAAGTAAT+TGG | - | chr4_4:1918646-1918665 | Msa0663230:intron | 20.0% |
| !!! | GTCTTTCTAAAAAAGTAATT+GGG | - | chr4_4:1918647-1918666 | Msa0663230:intron | 20.0% |
| !! | TACCTTACATATATATTTCT+TGG | - | chr4_4:1918896-1918915 | Msa0663230:intron | 20.0% |
| !!! | AATTTTCACAAAATTAATGG+AGG | - | chr4_4:1910631-1910650 | Msa0663230:intron | 20.0% |
| !! | AAATAATAGGTTATTGCAAT+TGG | + | chr4_4:1919007-1919026 | None:intergenic | 20.0% |
| !!! | TGTTGTTTTCATTTATACAT+AGG | - | chr4_4:1919097-1919116 | Msa0663230:intron | 20.0% |
| !! | TGTTTGAGGAAAAATATAAA+AGG | - | chr4_4:1919467-1919486 | Msa0663230:intron | 20.0% |
| !! | TCAACATAAATTGATGTATT+CGG | + | chr4_4:1919634-1919653 | None:intergenic | 20.0% |
| !! | TTAATATGATTGAGAGTAAA+TGG | - | chr4_4:1919983-1920002 | Msa0663230:intron | 20.0% |
| !! | ATGGAAAAAAAAAAAAACTG+AGG | - | chr4_4:1920174-1920193 | Msa0663230:intron | 20.0% |
| !! | TAGACAAATTAAAATGGAAA+TGG | + | chr4_4:1920204-1920223 | None:intergenic | 20.0% |
| !!! | ATTTCCATTTTAATTTGTCT+AGG | - | chr4_4:1920203-1920222 | Msa0663230:intron | 20.0% |
| !!! | GATAGTACATTTTTAAATTG+CGG | + | chr4_4:1921171-1921190 | None:intergenic | 20.0% |
| !! | TAAAAATACATCTACACATT+CGG | + | chr4_4:1921679-1921698 | None:intergenic | 20.0% |
| ! | GAGTAATATAATGAGTACTA+TGG | + | chr4_4:1910463-1910482 | None:intergenic | 25.0% |
| ! | AAAAGAAGAAAACAAGAGAA+GGG | + | chr4_4:1910505-1910524 | None:intergenic | 25.0% |
| ! | TATTATGTAAGGTAATTGTG+TGG | + | chr4_4:1910577-1910596 | None:intergenic | 25.0% |
| ! | TTTACCAAATCAGAATTAGA+AGG | + | chr4_4:1910674-1910693 | None:intergenic | 25.0% |
| !! | TTTTCCTTTGTATTATCTGT+GGG | + | chr4_4:1910899-1910918 | None:intergenic | 25.0% |
| !! | ATTTTCCTTTGTATTATCTG+TGG | + | chr4_4:1910900-1910919 | None:intergenic | 25.0% |
| ! | TACAAAGGAAAATAATGAGA+AGG | - | chr4_4:1910907-1910926 | Msa0663230:intron | 25.0% |
| !!! | TTTTTTAGTATAAAGAAGGC+TGG | + | chr4_4:1911162-1911181 | None:intergenic | 25.0% |
| !!! | ATTTTAGAGCCAAGATTTTA+GGG | + | chr4_4:1911683-1911702 | None:intergenic | 25.0% |
| !!! | AATTTTAGAGCCAAGATTTT+AGG | + | chr4_4:1911684-1911703 | None:intergenic | 25.0% |
| !!! | TGGTAGTATGAATTTTTTAG+TGG | + | chr4_4:1911754-1911773 | None:intergenic | 25.0% |
| ! | TTGACATTCAAAAATCATAC+TGG | + | chr4_4:1911801-1911820 | None:intergenic | 25.0% |
| !!! | AAGATTATGTTTTTTATGGG+AGG | - | chr4_4:1912049-1912068 | Msa0663230:intron | 25.0% |
| !!! | AGATTATGTTTTTTATGGGA+GGG | - | chr4_4:1912050-1912069 | Msa0663230:intron | 25.0% |
| ! | CTTAATTATATGTCTAACCT+GGG | - | chr4_4:1912153-1912172 | Msa0663230:intron | 25.0% |
| !! | GTTGCTTGTTAAAATATTTG+AGG | + | chr4_4:1912300-1912319 | None:intergenic | 25.0% |
| !! | AAGCAACAAATTTTACTACT+AGG | - | chr4_4:1912313-1912332 | Msa0663230:intron | 25.0% |
| !! | AACAAATTTTACTACTAGGA+TGG | - | chr4_4:1912317-1912336 | Msa0663230:intron | 25.0% |
| !! | ACAAATTTTACTACTAGGAT+GGG | - | chr4_4:1912318-1912337 | Msa0663230:intron | 25.0% |
| ! | TTGACGTATGATAATTTACA+AGG | - | chr4_4:1912539-1912558 | Msa0663230:intron | 25.0% |
| ! | GAAAAAAAAATCATTGTCAG+GGG | - | chr4_4:1913208-1913227 | Msa0663230:intron | 25.0% |
| !! | GTTGGTTCATTATATTCTAA+AGG | - | chr4_4:1913233-1913252 | Msa0663230:intron | 25.0% |
| ! | TCTCTATATAAATGTGTAGA+TGG | - | chr4_4:1913512-1913531 | Msa0663230:intron | 25.0% |
| ! | AGTTCAAATTACTACAATTG+TGG | - | chr4_4:1913651-1913670 | Msa0663230:intron | 25.0% |
| ! | CATATATTGTATATGTACCT+TGG | + | chr4_4:1913868-1913887 | None:intergenic | 25.0% |
| ! | TGAAGATCATAATTGATTGA+TGG | + | chr4_4:1913938-1913957 | None:intergenic | 25.0% |
| !! | TGTGTGTAGTTCATTTTATA+AGG | + | chr4_4:1914094-1914113 | None:intergenic | 25.0% |
| ! | TTGGAATGAATGAATATGTT+TGG | - | chr4_4:1914808-1914827 | Msa0663230:intron | 25.0% |
| ! | GGTACTTAAGAGTTAATTAT+AGG | - | chr4_4:1914991-1915010 | Msa0663230:intron | 25.0% |
| ! | TTGCAAAGTTATTGAAAATC+TGG | + | chr4_4:1915273-1915292 | None:intergenic | 25.0% |
| !! | AAGAATGTGTTGGTATTTAT+AGG | - | chr4_4:1915760-1915779 | Msa0663230:intron | 25.0% |
| !! | AGAATGTGTTGGTATTTATA+GGG | - | chr4_4:1915761-1915780 | Msa0663230:intron | 25.0% |
| ! | TGAAAATAAATTCATTTGCG+TGG | + | chr4_4:1916082-1916101 | None:intergenic | 25.0% |
| ! | GTAAAAAGGAAAAAGGTTTA+AGG | + | chr4_4:1916201-1916220 | None:intergenic | 25.0% |
| !! | TCAACTAAGAACTTCTTTTA+AGG | - | chr4_4:1916282-1916301 | Msa0663230:intron | 25.0% |
| ! | GAGATATTATCATTACGATT+TGG | + | chr4_4:1916473-1916492 | None:intergenic | 25.0% |
| ! | GTTTGGTAGATATTAAAAGA+AGG | + | chr4_4:1916575-1916594 | None:intergenic | 25.0% |
| !! | AATAAATGTAGCATTGAGTT+TGG | + | chr4_4:1916592-1916611 | None:intergenic | 25.0% |
| ! | TTTATCCAATTTATTTGAGG+TGG | + | chr4_4:1917047-1917066 | None:intergenic | 25.0% |
| ! | ATTGGATAAATTCAGTTAGT+TGG | - | chr4_4:1917057-1917076 | Msa0663230:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr4_4:1917249-1917268 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr4_4:1917262-1917281 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr4_4:1917261-1917280 | Msa0663230:intron | 25.0% |
| !!! | ATAATTCATAGTTTTACACG+TGG | + | chr4_4:1917452-1917471 | None:intergenic | 25.0% |
| !! | TTTTAAACTGTACTTGTCTT+TGG | - | chr4_4:1917622-1917641 | Msa0663230:intron | 25.0% |
| ! | GATAAGAATGCACTAAAATA+AGG | + | chr4_4:1918022-1918041 | None:intergenic | 25.0% |
| ! | TTCATATCTCATAGATATCT+AGG | + | chr4_4:1918124-1918143 | None:intergenic | 25.0% |
| ! | TATATACAACCCCTAAAAAA+AGG | - | chr4_4:1918189-1918208 | Msa0663230:intron | 25.0% |
| !!! | TCATCTCTAGTTTTTATGAA+TGG | - | chr4_4:1918223-1918242 | Msa0663230:intron | 25.0% |
| !!! | CATCTCTAGTTTTTATGAAT+GGG | - | chr4_4:1918224-1918243 | Msa0663230:intron | 25.0% |
| !!! | ATGAATGGGTATTTTAACAA+TGG | - | chr4_4:1918238-1918257 | Msa0663230:intron | 25.0% |
| !!! | ACACACCTCAATTTTTTATA+AGG | + | chr4_4:1918320-1918339 | None:intergenic | 25.0% |
| !!! | GTGTTATTTGAATAACCATT+TGG | - | chr4_4:1918336-1918355 | Msa0663230:CDS | 25.0% |
| !!! | ACTCACTTATTTTTTTCAAG+AGG | + | chr4_4:1918514-1918533 | None:intergenic | 25.0% |
| ! | CCATAATTTCTAAACATAAG+TGG | + | chr4_4:1918574-1918593 | None:intergenic | 25.0% |
| ! | CCACTTATGTTTAGAAATTA+TGG | - | chr4_4:1918571-1918590 | Msa0663230:CDS | 25.0% |
| ! | ATATATGTAAGGTAATTGTG+TGG | + | chr4_4:1918890-1918909 | None:intergenic | 25.0% |
| ! | TGCCAAGAAATATATATGTA+AGG | + | chr4_4:1918901-1918920 | None:intergenic | 25.0% |
| !!! | TAATGAAGTTTTGTTGTTTG+AGG | - | chr4_4:1919453-1919472 | Msa0663230:intron | 25.0% |
| ! | TGTGATCAAAACCAATATAT+AGG | + | chr4_4:1919720-1919739 | None:intergenic | 25.0% |
| ! | CTCTCAATCATATTAATGAA+CGG | + | chr4_4:1919979-1919998 | None:intergenic | 25.0% |
| ! | GAGAATTAACTTCAAATTCT+TGG | - | chr4_4:1920036-1920055 | Msa0663230:intron | 25.0% |
| !!! | TTTTTTTTCCATCCGAAAAT+AGG | + | chr4_4:1920117-1920136 | None:intergenic | 25.0% |
| ! | TCATAATTGAATAAGCACAT+GGG | + | chr4_4:1920313-1920332 | None:intergenic | 25.0% |
| ! | TTCATAATTGAATAAGCACA+TGG | + | chr4_4:1920314-1920333 | None:intergenic | 25.0% |
| ! | TTTAAGAGACTTGAAATTGA+AGG | - | chr4_4:1920335-1920354 | Msa0663230:intron | 25.0% |
| !!! | ATTTTAATGTATTGAACGTG+TGG | - | chr4_4:1920497-1920516 | Msa0663230:intron | 25.0% |
| ! | TTTCAATATGAACTTGTAGA+TGG | - | chr4_4:1920689-1920708 | Msa0663230:intron | 25.0% |
| ! | TATGATATATACAATGCAGA+TGG | - | chr4_4:1921551-1921570 | Msa0663230:five_prime_UTR | 25.0% |
| ! | ATGATATATACAATGCAGAT+GGG | - | chr4_4:1921552-1921571 | Msa0663230:five_prime_UTR | 25.0% |
| GAAAAGAAGAAAACAAGAGA+AGG | + | chr4_4:1910506-1910525 | None:intergenic | 30.0% | |
| TGGTCCAAGAATATTATGTA+AGG | + | chr4_4:1910588-1910607 | None:intergenic | 30.0% | |
| ! | AGATTCTCCATCTTTAAGAA+TGG | + | chr4_4:1910822-1910841 | None:intergenic | 30.0% |
| !!! | GGATCATTATTTTGAAGATC+AGG | - | chr4_4:1910865-1910884 | Msa0663230:intron | 30.0% |
| !!! | CATTATTTTGAAGATCAGGT+TGG | - | chr4_4:1910869-1910888 | Msa0663230:intron | 30.0% |
| TTAAGAATTCGAAGTGACTT+AGG | - | chr4_4:1911364-1911383 | Msa0663230:CDS | 30.0% | |
| ! | TTAAGAGTGTGGTTAAACAA+AGG | - | chr4_4:1911477-1911496 | Msa0663230:intron | 30.0% |
| ATTAGTGGAGGGAAAAAATT+AGG | + | chr4_4:1911586-1911605 | None:intergenic | 30.0% | |
| AGTTGTTGCAAACCTAATAA+GGG | + | chr4_4:1911609-1911628 | None:intergenic | 30.0% | |
| !!! | GATTATGTTTTTTATGGGAG+GGG | - | chr4_4:1912051-1912070 | Msa0663230:intron | 30.0% |
| !!! | ATTATGTTTTTTATGGGAGG+GGG | - | chr4_4:1912052-1912071 | Msa0663230:intron | 30.0% |
| CCAGGTTAGACATATAATTA+AGG | + | chr4_4:1912155-1912174 | None:intergenic | 30.0% | |
| CCTTAATTATATGTCTAACC+TGG | - | chr4_4:1912152-1912171 | Msa0663230:intron | 30.0% | |
| ! | AATTAGGGTTAGTATTAGGA+GGG | + | chr4_4:1912241-1912260 | None:intergenic | 30.0% |
| ! | AAATTAGGGTTAGTATTAGG+AGG | + | chr4_4:1912242-1912261 | None:intergenic | 30.0% |
| CATATTACTATAACAAGCAG+TGG | - | chr4_4:1912493-1912512 | Msa0663230:intron | 30.0% | |
| CTTATACACTACATTTGAAG+TGG | + | chr4_4:1912922-1912941 | None:intergenic | 30.0% | |
| CACTTCAAATGTAGTGTATA+AGG | - | chr4_4:1912920-1912939 | Msa0663230:CDS | 30.0% | |
| ! | CCTTTTGTTAGTACAAATGT+TGG | + | chr4_4:1913622-1913641 | None:intergenic | 30.0% |
| CCAACATTTGTACTAACAAA+AGG | - | chr4_4:1913619-1913638 | Msa0663230:intron | 30.0% | |
| GTAGTAATTTGAACTCACTT+TGG | + | chr4_4:1913646-1913665 | None:intergenic | 30.0% | |
| !! | AAGATGAAGATTTTCAAGGT+TGG | + | chr4_4:1913784-1913803 | None:intergenic | 30.0% |
| ! | CTGAAAGATGAAGATTTTCA+AGG | + | chr4_4:1913788-1913807 | None:intergenic | 30.0% |
| AATAGTAGTGTCTTGCAATT+TGG | - | chr4_4:1913813-1913832 | Msa0663230:intron | 30.0% | |
| TCTAATCAATCTTCAACGTA+AGG | + | chr4_4:1914127-1914146 | None:intergenic | 30.0% | |
| TCTAATCAATCTTCATCGTA+AGG | + | chr4_4:1914167-1914186 | None:intergenic | 30.0% | |
| ATAGATTGTGAAATCTGACT+TGG | - | chr4_4:1914789-1914808 | Msa0663230:intron | 30.0% | |
| TGTTATTGTCTTACTCAGAA+AGG | - | chr4_4:1914863-1914882 | Msa0663230:intron | 30.0% | |
| GTTATTGTCTTACTCAGAAA+GGG | - | chr4_4:1914864-1914883 | Msa0663230:intron | 30.0% | |
| TTATACAATTGCACACAGTA+TGG | + | chr4_4:1915085-1915104 | None:intergenic | 30.0% | |
| AATGAGCTCAAAATGTTGTT+CGG | + | chr4_4:1915245-1915264 | None:intergenic | 30.0% | |
| !! | CTTCTAAAATGTTCTGCTAT+TGG | + | chr4_4:1915699-1915718 | None:intergenic | 30.0% |
| AGAATTTGTGAAGAATGTGT+TGG | - | chr4_4:1915750-1915769 | Msa0663230:intron | 30.0% | |
| ! | GAATGTGTTGGTATTTATAG+GGG | - | chr4_4:1915762-1915781 | Msa0663230:intron | 30.0% |
| GACTGACATTACACTATATA+TGG | + | chr4_4:1915796-1915815 | None:intergenic | 30.0% | |
| AATGTCTTCTAATTGTCTTG+TGG | + | chr4_4:1915998-1916017 | None:intergenic | 30.0% | |
| !! | ATCAAGCTTTAAGTTGTAGA+TGG | + | chr4_4:1916249-1916268 | None:intergenic | 30.0% |
| AAAAGAAGTTCTTAGTTGAC+AGG | + | chr4_4:1916281-1916300 | None:intergenic | 30.0% | |
| !! | TTTTGGATTGATTCATGGAT+TGG | + | chr4_4:1916388-1916407 | None:intergenic | 30.0% |
| ! | GCTTTAGATAAATCTTGCTT+CGG | + | chr4_4:1916551-1916570 | None:intergenic | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr4_4:1917164-1917183 | Msa0663230:intron | 30.0% |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr4_4:1917236-1917255 | None:intergenic | 30.0% | |
| ! | AAAGATAAGCACAAGTATTG+TGG | + | chr4_4:1917543-1917562 | None:intergenic | 30.0% |
| AACAATGGATCTTACATCTT+AGG | - | chr4_4:1918253-1918272 | Msa0663230:intron | 30.0% | |
| !! | AGAAAAAGTAGGTATTGACA+CGG | - | chr4_4:1918392-1918411 | Msa0663230:CDS | 30.0% |
| AAATTATGGTTTAGCAGCAA+AGG | - | chr4_4:1918585-1918604 | Msa0663230:CDS | 30.0% | |
| !! | TATTGGTGTTCTAAAGTGAA+GGG | + | chr4_4:1918775-1918794 | None:intergenic | 30.0% |
| !! | ATATTGGTGTTCTAAAGTGA+AGG | + | chr4_4:1918776-1918795 | None:intergenic | 30.0% |
| GGGAAACAGAAATTCAATAT+TGG | + | chr4_4:1918792-1918811 | None:intergenic | 30.0% | |
| TGAAAGAGTGATGAAAAGAA+GGG | + | chr4_4:1918812-1918831 | None:intergenic | 30.0% | |
| ATGAAAGAGTGATGAAAAGA+AGG | + | chr4_4:1918813-1918832 | None:intergenic | 30.0% | |
| !!! | GATGAAGTCATTTTTGAAGA+TGG | - | chr4_4:1919128-1919147 | Msa0663230:intron | 30.0% |
| CGGTTATAACAAGTATTCAT+CGG | - | chr4_4:1919548-1919567 | Msa0663230:intron | 30.0% | |
| ATGGAAGTAGTCCTATATAT+TGG | - | chr4_4:1919706-1919725 | Msa0663230:intron | 30.0% | |
| TGTGGCTAAAAAATAGAAAG+TGG | - | chr4_4:1919872-1919891 | Msa0663230:intron | 30.0% | |
| !!! | AGAATTTTTCAAGACACATG+TGG | + | chr4_4:1919925-1919944 | None:intergenic | 30.0% |
| CATGATACTTAAGAGTTTGA+TGG | + | chr4_4:1920093-1920112 | None:intergenic | 30.0% | |
| CATCAAACTCTTAAGTATCA+TGG | - | chr4_4:1920091-1920110 | Msa0663230:intron | 30.0% | |
| ! | TAAGTATCATGGCCTATTTT+CGG | - | chr4_4:1920102-1920121 | Msa0663230:intron | 30.0% |
| CCTTCCTAGACAAATTAAAA+TGG | + | chr4_4:1920210-1920229 | None:intergenic | 30.0% | |
| !!! | CCATTTTAATTTGTCTAGGA+AGG | - | chr4_4:1920207-1920226 | Msa0663230:intron | 30.0% |
| CAAACATTTGTAGCAACAAA+AGG | - | chr4_4:1920796-1920815 | Msa0663230:intron | 30.0% | |
| AATTCAGATGAGTACAATTG+TGG | - | chr4_4:1920828-1920847 | Msa0663230:intron | 30.0% | |
| !! | TACCATTTTGTTTCTCACAA+TGG | + | chr4_4:1920920-1920939 | None:intergenic | 30.0% |
| AATAGTAGTGTCTTGCAATT+TGG | - | chr4_4:1913813-1913832 | Msa0663230:intron | 30.0% | |
| ATTATGTACCTTAGCAATGA+TGG | + | chr4_4:1921036-1921055 | None:intergenic | 30.0% | |
| CATTGCTAAGGTACATAATA+TGG | - | chr4_4:1921037-1921056 | Msa0663230:intron | 30.0% | |
| TTATCGCATAAAATTCAGTG+TGG | - | chr4_4:1921142-1921161 | Msa0663230:intron | 30.0% | |
| TATCGCATAAAATTCAGTGT+GGG | - | chr4_4:1921143-1921162 | Msa0663230:intron | 30.0% | |
| TAAAAAGAGCAACTTTGCAT+TGG | + | chr4_4:1921406-1921425 | None:intergenic | 30.0% | |
| ! | AATGCAAAGTTGCTCTTTTT+AGG | - | chr4_4:1921405-1921424 | Msa0663230:intron | 30.0% |
| TCGTGTATTGAATAATGATG+AGG | - | chr4_4:1921504-1921523 | Msa0663230:CDS | 30.0% | |
| ! | ATTAGTGAAAACTCTGAGAA+TGG | - | chr4_4:1921602-1921621 | Msa0663230:five_prime_UTR | 30.0% |
| ! | GAAAGTATAGTGTGGATAAG+TGG | + | chr4_4:1910548-1910567 | None:intergenic | 35.0% |
| ! | GGAAGAATGAAAGTATAGTG+TGG | + | chr4_4:1910556-1910575 | None:intergenic | 35.0% |
| CACAAAATTAATGGAGGAGT+CGG | - | chr4_4:1910637-1910656 | Msa0663230:intron | 35.0% | |
| ACAAAATTAATGGAGGAGTC+GGG | - | chr4_4:1910638-1910657 | Msa0663230:intron | 35.0% | |
| ! | TTGGCCTTCTAATTCTGATT+TGG | - | chr4_4:1910667-1910686 | Msa0663230:intron | 35.0% |
| AATAGGTACGTGATTGCAAT+TGG | + | chr4_4:1910699-1910718 | None:intergenic | 35.0% | |
| GATGAAGCCATTCTTAAAGA+TGG | - | chr4_4:1910812-1910831 | Msa0663230:intron | 35.0% | |
| ! | ATCTGTATGTGATGATGATG+AGG | - | chr4_4:1910844-1910863 | Msa0663230:intron | 35.0% |
| AGATCCCACAGATAATACAA+AGG | - | chr4_4:1910892-1910911 | Msa0663230:intron | 35.0% | |
| CAAACCTAATAAGGGATTAG+TGG | + | chr4_4:1911601-1911620 | None:intergenic | 35.0% | |
| GAGTTGTTGCAAACCTAATA+AGG | + | chr4_4:1911610-1911629 | None:intergenic | 35.0% | |
| AATCCTCAACCCTAAAATCT+TGG | - | chr4_4:1911671-1911690 | Msa0663230:intron | 35.0% | |
| TTTGTTACAAACAGGGTCTA+TGG | - | chr4_4:1911904-1911923 | Msa0663230:intron | 35.0% | |
| TTGTTACAAACAGGGTCTAT+GGG | - | chr4_4:1911905-1911924 | Msa0663230:intron | 35.0% | |
| !!! | TTATGTTTTTTATGGGAGGG+GGG | - | chr4_4:1912053-1912072 | Msa0663230:intron | 35.0% |
| TGAGTGAAATTCGCTATGTA+TGG | + | chr4_4:1912131-1912150 | None:intergenic | 35.0% | |
| GGCCGAATAAATTAGATTGA+TGG | + | chr4_4:1912443-1912462 | None:intergenic | 35.0% | |
| TTACTATAACAAGCAGTGGT+AGG | - | chr4_4:1912497-1912516 | Msa0663230:intron | 35.0% | |
| !!! | CTTCTCCATTTTTTATGACC+CGG | - | chr4_4:1913027-1913046 | Msa0663230:CDS | 35.0% |
| !!! | TTCTCCATTTTTTATGACCC+GGG | - | chr4_4:1913028-1913047 | Msa0663230:CDS | 35.0% |
| ! | AAGCTACACTCTTTTTGTAG+AGG | + | chr4_4:1913157-1913176 | None:intergenic | 35.0% |
| TGTAGCTTAAGCAAAGTGAA+AGG | - | chr4_4:1913169-1913188 | Msa0663230:intron | 35.0% | |
| AAGTGATATTACTCTTCCAG+AGG | - | chr4_4:1913677-1913696 | Msa0663230:intron | 35.0% | |
| ! | TACCATTTTGTTCCTCACAT+TGG | + | chr4_4:1913743-1913762 | None:intergenic | 35.0% |
| ! | TAATTTCTTATTGGCTAGGG+TGG | - | chr4_4:1914582-1914601 | Msa0663230:intron | 35.0% |
| TAAATTCTGCAGATGGATGA+TGG | - | chr4_4:1914709-1914728 | Msa0663230:intron | 35.0% | |
| TGATGGCTATAACCTTAAAG+TGG | - | chr4_4:1914726-1914745 | Msa0663230:intron | 35.0% | |
| TCACTAGTTCATCCACTTTA+AGG | + | chr4_4:1914741-1914760 | None:intergenic | 35.0% | |
| CGCATGCAAAAAAAATAGAG+TGG | + | chr4_4:1915178-1915197 | None:intergenic | 35.0% | |
| AAACATGTGCTACAAGAAGA+TGG | - | chr4_4:1915461-1915480 | Msa0663230:intron | 35.0% | |
| GGATAGTACGAATGGAAAAA+GGG | + | chr4_4:1915644-1915663 | None:intergenic | 35.0% | |
| TGGATAGTACGAATGGAAAA+AGG | + | chr4_4:1915645-1915664 | None:intergenic | 35.0% | |
| TCTTGTATGGATAGTACGAA+TGG | + | chr4_4:1915652-1915671 | None:intergenic | 35.0% | |
| AAGGTTCTTCTCATCTTGTA+TGG | + | chr4_4:1915665-1915684 | None:intergenic | 35.0% | |
| TATAGTGTAATGTCAGTCGA+TGG | - | chr4_4:1915798-1915817 | Msa0663230:intron | 35.0% | |
| AAAAACGTGGTCAATAGAGT+CGG | - | chr4_4:1915828-1915847 | Msa0663230:intron | 35.0% | |
| TAATTGTCTTGTGGTGCTTT+CGG | + | chr4_4:1915989-1916008 | None:intergenic | 35.0% | |
| !! | CTTTCAGATGTGTTTCTAGT+AGG | + | chr4_4:1916120-1916139 | None:intergenic | 35.0% |
| !! | TTCATGGATTGGTGATCATT+TGG | + | chr4_4:1916377-1916396 | None:intergenic | 35.0% |
| ! | ATTTAGTTGGAATTGGGTTG+TGG | + | chr4_4:1916414-1916433 | None:intergenic | 35.0% |
| AAATCTTGCTTCGGTAGAAT+GGG | + | chr4_4:1916542-1916561 | None:intergenic | 35.0% | |
| TAAATCTTGCTTCGGTAGAA+TGG | + | chr4_4:1916543-1916562 | None:intergenic | 35.0% | |
| TTGTAAATCCACATGAACAG+TGG | - | chr4_4:1917005-1917024 | Msa0663230:intron | 35.0% | |
| GATCTCCACCTCAAATAAAT+TGG | - | chr4_4:1917039-1917058 | Msa0663230:intron | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr4_4:1917169-1917188 | None:intergenic | 35.0% | |
| GATTACTCCATCATCAACTT+GGG | + | chr4_4:1918709-1918728 | None:intergenic | 35.0% | |
| TGATTACTCCATCATCAACT+TGG | + | chr4_4:1918710-1918729 | None:intergenic | 35.0% | |
| ! | GAAAGTATAGTGTGGATAAG+AGG | + | chr4_4:1910548-1910567 | None:intergenic | 35.0% |
| ! | GGAAGAATGAAAGTATAGTG+TGG | + | chr4_4:1910556-1910575 | None:intergenic | 35.0% |
| ACAAAATTAATGGAGGAGTC+AGG | - | chr4_4:1910638-1910657 | Msa0663230:intron | 35.0% | |
| ACCAAATCAGAATCATGAGA+AGG | + | chr4_4:1918979-1918998 | None:intergenic | 35.0% | |
| ! | TGTGATGATGAGGATCAAAT+TGG | - | chr4_4:1919167-1919186 | Msa0663230:intron | 35.0% |
| AAGGAACTTTCAGATGTCAT+AGG | - | chr4_4:1919245-1919264 | Msa0663230:intron | 35.0% | |
| AGATGTCATAGGCTTAAAGA+AGG | - | chr4_4:1919256-1919275 | Msa0663230:intron | 35.0% | |
| ACCGTTAGTTGAAAAGTTGA+CGG | + | chr4_4:1919532-1919551 | None:intergenic | 35.0% | |
| ! | GGAAGAAGAGAAAAAAGCAT+AGG | - | chr4_4:1920228-1920247 | Msa0663230:intron | 35.0% |
| GTACTCATCTGAATTCACTT+TGG | + | chr4_4:1920823-1920842 | None:intergenic | 35.0% | |
| AAGTGATAATACTCTTCCAG+AGG | - | chr4_4:1920854-1920873 | Msa0663230:intron | 35.0% | |
| GTCCATTGTGAGAAACAAAA+TGG | - | chr4_4:1920915-1920934 | Msa0663230:intron | 35.0% | |
| AAGATGAAGATTTGCAAGGT+GGG | + | chr4_4:1920961-1920980 | None:intergenic | 35.0% | |
| AAAGATGAAGATTTGCAAGG+TGG | + | chr4_4:1920962-1920981 | None:intergenic | 35.0% | |
| CTGAAAGATGAAGATTTGCA+AGG | + | chr4_4:1920965-1920984 | None:intergenic | 35.0% | |
| !!! | TAACATTTTTTCTAACGGCC+AGG | + | chr4_4:1921226-1921245 | None:intergenic | 35.0% |
| TTGTTTAACATGTGCCCTAA+GGG | - | chr4_4:1921428-1921447 | Msa0663230:intron | 35.0% | |
| AGAAGAAAACAAGAGAAGGG+TGG | + | chr4_4:1910502-1910521 | None:intergenic | 40.0% | |
| ACGAACCTTCTTTAAGCCTA+TGG | + | chr4_4:1910966-1910985 | None:intergenic | 40.0% | |
| ! | CCTAATAAGGGATTAGTGGA+GGG | + | chr4_4:1911597-1911616 | None:intergenic | 40.0% |
| ! | ACCTAATAAGGGATTAGTGG+AGG | + | chr4_4:1911598-1911617 | None:intergenic | 40.0% |
| TGTTACAAACAGGGTCTATG+GGG | - | chr4_4:1911906-1911925 | Msa0663230:intron | 40.0% | |
| GTGGTAGGATGATTTACAGT+AGG | - | chr4_4:1912512-1912531 | Msa0663230:intron | 40.0% | |
| TCTTGTCATAGTCCAATGTG+AGG | - | chr4_4:1913728-1913747 | Msa0663230:intron | 40.0% | |
| GTCCAATGTGAGGAACAAAA+TGG | - | chr4_4:1913738-1913757 | Msa0663230:intron | 40.0% | |
| TGAGGAACAAAATGGTATCC+TGG | - | chr4_4:1913746-1913765 | Msa0663230:intron | 40.0% | |
| !!! | GGTTGGTCAATATTTTGACC+AGG | + | chr4_4:1913767-1913786 | None:intergenic | 40.0% |
| TATATGTACCTTGGCAACGA+TGG | + | chr4_4:1913859-1913878 | None:intergenic | 40.0% | |
| ! | TGTCGAGATTGCTATTCTCA+GGG | + | chr4_4:1914767-1914786 | None:intergenic | 40.0% |
| TGAAATTCTCCCCCAAAGTA+CGG | + | chr4_4:1914893-1914912 | None:intergenic | 40.0% | |
| ACCAAAGTGCATGTCTTTGT+TGG | - | chr4_4:1914970-1914989 | Msa0663230:intron | 40.0% | |
| ACCAACAAAGACATGCACTT+TGG | + | chr4_4:1914974-1914993 | None:intergenic | 40.0% | |
| AATTGCACACAGTATGGACT+GGG | + | chr4_4:1915079-1915098 | None:intergenic | 40.0% | |
| ATGTGCTACAAGAAGATGGA+GGG | - | chr4_4:1915465-1915484 | Msa0663230:intron | 40.0% | |
| GAGAAGAACCTTTGCATGAA+AGG | - | chr4_4:1915673-1915692 | Msa0663230:intron | 40.0% | |
| TGTAATGTCAGTCGATGGAA+GGG | - | chr4_4:1915803-1915822 | Msa0663230:intron | 40.0% | |
| TGTTGCTCTTGAAGCTTCTT+GGG | + | chr4_4:1915957-1915976 | None:intergenic | 40.0% | |
| TTGTTGCTCTTGAAGCTTCT+TGG | + | chr4_4:1915958-1915977 | None:intergenic | 40.0% | |
| !! | ATGGATTGGTGATCATTTGG+TGG | + | chr4_4:1916374-1916393 | None:intergenic | 40.0% |
| !!! | GGTGGTTTTGGATTGATTCA+TGG | + | chr4_4:1916393-1916412 | None:intergenic | 40.0% |
| ! | AGAAACGTGTTGATCAGAGT+CGG | - | chr4_4:1916621-1916640 | Msa0663230:intron | 40.0% |
| AATGAGTACCACTGTTCATG+TGG | + | chr4_4:1917016-1917035 | None:intergenic | 40.0% | |
| ! | CGATGTGAGGATTTTGTTGA+TGG | + | chr4_4:1918086-1918105 | None:intergenic | 40.0% |
| TGAATCATGATGTCGATGTG+AGG | + | chr4_4:1918099-1918118 | None:intergenic | 40.0% | |
| ! | ACCATTTGGGTGACAACTTT+TGG | - | chr4_4:1918350-1918369 | Msa0663230:CDS | 40.0% |
| ! | CCATTTGGGTGACAACTTTT+GGG | - | chr4_4:1918351-1918370 | Msa0663230:CDS | 40.0% |
| GGTGTAAGTAAGCAGCTATA+GGG | + | chr4_4:1918553-1918572 | None:intergenic | 40.0% | |
| TGGTGTAAGTAAGCAGCTAT+AGG | + | chr4_4:1918554-1918573 | None:intergenic | 40.0% | |
| TTATGGTTTAGCAGCAAAGG+TGG | - | chr4_4:1918588-1918607 | Msa0663230:CDS | 40.0% | |
| ! | TCTAAAGTGAAGGGTAGCTA+AGG | + | chr4_4:1918766-1918785 | None:intergenic | 40.0% |
| TATAGTGTGGATAAGAGGTG+GGG | + | chr4_4:1918856-1918875 | None:intergenic | 40.0% | |
| GTATAGTGTGGATAAGAGGT+GGG | + | chr4_4:1918857-1918876 | None:intergenic | 40.0% | |
| AGTATAGTGTGGATAAGAGG+TGG | + | chr4_4:1918858-1918877 | None:intergenic | 40.0% | |
| GCCTTCTCATGATTCTGATT+TGG | - | chr4_4:1918975-1918994 | Msa0663230:intron | 40.0% | |
| ! | TGAATCTGTGTGTGATGATG+AGG | - | chr4_4:1919157-1919176 | Msa0663230:intron | 40.0% |
| AGATCCCACAGATGATACAA+AGG | - | chr4_4:1919190-1919209 | Msa0663230:intron | 40.0% | |
| GATCCCACAGATGATACAAA+GGG | - | chr4_4:1919191-1919210 | Msa0663230:intron | 40.0% | |
| CATCCCTTTGTATCATCTGT+GGG | + | chr4_4:1919197-1919216 | None:intergenic | 40.0% | |
| TACAAAGGGATGCAATGAGA+AGG | - | chr4_4:1919205-1919224 | Msa0663230:intron | 40.0% | |
| GGAGATAACAGAGAGATTGA+AGG | - | chr4_4:1919226-1919245 | Msa0663230:intron | 40.0% | |
| GTCATAGGCTTAAAGAAGGT+TGG | - | chr4_4:1919260-1919279 | Msa0663230:intron | 40.0% | |
| ! | GCCGTCAACTTTTCAACTAA+CGG | - | chr4_4:1919528-1919547 | Msa0663230:intron | 40.0% |
| GGCAAATAGTGCATTGTGAT+TGG | + | chr4_4:1919838-1919857 | None:intergenic | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | - | chr4_4:1919846-1919865 | Msa0663230:intron | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | - | chr4_4:1919849-1919868 | Msa0663230:intron | 40.0% | |
| GTTTGATGGAGATGCAAGTA+TGG | + | chr4_4:1920079-1920098 | None:intergenic | 40.0% | |
| ! | TATCATGGCCTATTTTCGGA+TGG | - | chr4_4:1920106-1920125 | Msa0663230:intron | 40.0% |
| !! | CATAGTCTTTAGCTTTCTCC+AGG | + | chr4_4:1920728-1920747 | None:intergenic | 40.0% |
| GGAGAAAGCTAAAGACTATG+TGG | - | chr4_4:1920728-1920747 | Msa0663230:intron | 40.0% | |
| ! | AATGATGGTGATGTCAAGGA+TGG | + | chr4_4:1921021-1921040 | None:intergenic | 40.0% |
| ! | TAGCAATGATGGTGATGTCA+AGG | + | chr4_4:1921025-1921044 | None:intergenic | 40.0% |
| TGACATCACCATCATTGCTA+AGG | - | chr4_4:1921025-1921044 | Msa0663230:intron | 40.0% | |
| TTCTTAACATGTGCCCTTGA+GGG | + | chr4_4:1921314-1921333 | None:intergenic | 40.0% | |
| TTTCTTAACATGTGCCCTTG+AGG | + | chr4_4:1921315-1921334 | None:intergenic | 40.0% | |
| GTTGTTTAACATGTGCCCTA+AGG | - | chr4_4:1921427-1921446 | Msa0663230:intron | 40.0% | |
| TATACAATGCAGATGGGTGA+TGG | - | chr4_4:1921558-1921577 | Msa0663230:five_prime_UTR | 40.0% | |
| AAACAAGAGAAGGGTGGTTG+AGG | + | chr4_4:1910496-1910515 | None:intergenic | 45.0% | |
| GGAGATCACAGAGATGTTGA+AGG | - | chr4_4:1910928-1910947 | Msa0663230:intron | 45.0% | |
| AAGGAACTTTCAGACGCCAT+AGG | - | chr4_4:1910947-1910966 | Msa0663230:intron | 45.0% | |
| AGACGCCATAGGCTTAAAGA+AGG | - | chr4_4:1910958-1910977 | Msa0663230:intron | 45.0% | |
| CCCTCCACTAATCCCTTATT+AGG | - | chr4_4:1911594-1911613 | Msa0663230:intron | 45.0% | |
| !!! | GAGCCAAGATTTTAGGGTTG+AGG | + | chr4_4:1911677-1911696 | None:intergenic | 45.0% |
| !!! | TCCATTTTTTATGACCCGGG+CGG | - | chr4_4:1913031-1913050 | Msa0663230:CDS | 45.0% |
| AAATCATTGTCAGGGGTCGT+TGG | - | chr4_4:1913215-1913234 | Msa0663230:intron | 45.0% | |
| AGAGAGCTAGAACAAGAAGC+TGG | - | chr4_4:1913594-1913613 | Msa0663230:intron | 45.0% | |
| GACACTCTTGCTTTAACCTC+TGG | + | chr4_4:1913696-1913715 | None:intergenic | 45.0% | |
| ! | GTGTCGAGATTGCTATTCTC+AGG | + | chr4_4:1914768-1914787 | None:intergenic | 45.0% |
| GGATTGAGCTACGTAAGTGT+AGG | - | chr4_4:1915049-1915068 | Msa0663230:intron | 45.0% | |
| CAATTGCACACAGTATGGAC+TGG | + | chr4_4:1915080-1915099 | None:intergenic | 45.0% | |
| CATGTGCTACAAGAAGATGG+AGG | - | chr4_4:1915464-1915483 | Msa0663230:intron | 45.0% | |
| TGTGCTACAAGAAGATGGAG+GGG | - | chr4_4:1915466-1915485 | Msa0663230:intron | 45.0% | |
| ACATCCTAAGAAGGAGAGGA+GGG | - | chr4_4:1915520-1915539 | Msa0663230:intron | 45.0% | |
| CATCCTCGGAAAGGGAAAAT+GGG | - | chr4_4:1915564-1915583 | Msa0663230:intron | 45.0% | |
| !! | GCTATTGGCCTTTCATGCAA+AGG | + | chr4_4:1915684-1915703 | None:intergenic | 45.0% |
| GTGTAATGTCAGTCGATGGA+AGG | - | chr4_4:1915802-1915821 | Msa0663230:intron | 45.0% | |
| CGATGGAAGGGAAAAAAACG+TGG | - | chr4_4:1915815-1915834 | Msa0663230:intron | 45.0% | |
| ! | ATGTTTTCCCTTCCATCGAC+TGG | + | chr4_4:1915855-1915874 | None:intergenic | 45.0% |
| ! | AATCTTCGAGTGGCGGTTTT+TGG | + | chr4_4:1915933-1915952 | None:intergenic | 45.0% |
| CTTCTTGGGTAATCTTCGAG+TGG | + | chr4_4:1915943-1915962 | None:intergenic | 45.0% | |
| !! | GAATTGGGTTGTGGTGGTTT+TGG | + | chr4_4:1916405-1916424 | None:intergenic | 45.0% |
| ! | TAGTTGGAATTGGGTTGTGG+TGG | + | chr4_4:1916411-1916430 | None:intergenic | 45.0% |
| ACCTTCCCATGCTTCAAACA+TGG | - | chr4_4:1917412-1917431 | Msa0663230:intron | 45.0% | |
| ! | ACCATGTTTGAAGCATGGGA+AGG | + | chr4_4:1917416-1917435 | None:intergenic | 45.0% |
| ! | AGCGACCATGTTTGAAGCAT+GGG | + | chr4_4:1917420-1917439 | None:intergenic | 45.0% |
| ! | TAGCGACCATGTTTGAAGCA+TGG | + | chr4_4:1917421-1917440 | None:intergenic | 45.0% |
| CTTCAAACATGGTCGCTATC+TGG | - | chr4_4:1917423-1917442 | Msa0663230:intron | 45.0% | |
| CCCAAAAGTTGTCACCCAAA+TGG | + | chr4_4:1918354-1918373 | None:intergenic | 45.0% | |
| !! | GACTCATCCCAAGTTGATGA+TGG | - | chr4_4:1918699-1918718 | Msa0663230:intron | 45.0% |
| AGGTTGTGAGGTGAGTAGTA+TGG | + | chr4_4:1918746-1918765 | None:intergenic | 45.0% | |
| TAAGAGGTGGGGTTGTGTAT+AGG | + | chr4_4:1918845-1918864 | None:intergenic | 45.0% | |
| TGGAGGAGTCAGGAGAAAAT+TGG | - | chr4_4:1918953-1918972 | Msa0663230:intron | 45.0% | |
| GCATCCCTTTGTATCATCTG+TGG | + | chr4_4:1919198-1919217 | None:intergenic | 45.0% | |
| ! | CAGCCCTTTTACCAGTGTTT+CGG | - | chr4_4:1920416-1920435 | Msa0663230:intron | 45.0% |
| AGAGAGCTAGAACAAGTAGC+TGG | - | chr4_4:1920771-1920790 | Msa0663230:intron | 45.0% | |
| GACTCACATAAGTTTCAGCC+TGG | - | chr4_4:1921205-1921224 | Msa0663230:CDS | 45.0% | |
| ! | TCTGCTAACTTGTGCCCTTA+GGG | + | chr4_4:1921445-1921464 | None:intergenic | 45.0% |
| !!! | ATTATTTTTTTAAATAAAGT+AGG | - | chr4_4:1911237-1911256 | Msa0663230:CDS | 5.0% |
| !!! | TTATTTTTTTAAATAAAGTA+GGG | - | chr4_4:1911238-1911257 | Msa0663230:CDS | 5.0% |
| !!! | TAGTTATATTTTAATTTTAA+AGG | - | chr4_4:1913072-1913091 | Msa0663230:intron | 5.0% |
| !!! | TTTTAATAATTTACTAAAAA+GGG | + | chr4_4:1914529-1914548 | None:intergenic | 5.0% |
| !!! | ATTTTAATAATTTACTAAAA+AGG | + | chr4_4:1914530-1914549 | None:intergenic | 5.0% |
| !! | AATATTAATTAATTTCTTAT+TGG | - | chr4_4:1914573-1914592 | Msa0663230:intron | 5.0% |
| !!! | ATAAATTTTATTATGTAAAA+AGG | + | chr4_4:1916215-1916234 | None:intergenic | 5.0% |
| !!! | TAATTATTTTTATATTTAGT+TGG | + | chr4_4:1916427-1916446 | None:intergenic | 5.0% |
| !!! | TTTTATATAAGATAAATATT+AGG | + | chr4_4:1916919-1916938 | None:intergenic | 5.0% |
| TGGAGGAGTCGGGAGAAAAT+TGG | - | chr4_4:1910648-1910667 | Msa0663230:intron | 50.0% | |
| GATGATAGATGCCCCATGTG+CGG | - | chr4_4:1911302-1911321 | Msa0663230:CDS | 50.0% | |
| ACAGAAAGCCATCCGCACAT+GGG | + | chr4_4:1911317-1911336 | None:intergenic | 50.0% | |
| ACCGCCCGGGTCATAAAAAA+TGG | + | chr4_4:1913035-1913054 | None:intergenic | 50.0% | |
| ! | AACGATGGTGATGTCAAGGG+TGG | + | chr4_4:1913844-1913863 | None:intergenic | 50.0% |
| ! | GGCAACGATGGTGATGTCAA+GGG | + | chr4_4:1913847-1913866 | None:intergenic | 50.0% |
| ! | TGGCAACGATGGTGATGTCA+AGG | + | chr4_4:1913848-1913867 | None:intergenic | 50.0% |
| TGACATCACCATCGTTGCCA+AGG | - | chr4_4:1913848-1913867 | Msa0663230:intron | 50.0% | |
| AGAAAGGGCCACCGTACTTT+GGG | - | chr4_4:1914879-1914898 | Msa0663230:intron | 50.0% | |
| AATTCTCCCCCAAAGTACGG+TGG | + | chr4_4:1914890-1914909 | None:intergenic | 50.0% | |
| GTGCTACAAGAAGATGGAGG+GGG | - | chr4_4:1915467-1915486 | Msa0663230:intron | 50.0% | |
| TCCTCTCGCACATCCTAAGA+AGG | - | chr4_4:1915511-1915530 | Msa0663230:intron | 50.0% | |
| TCCTTCTTAGGATGTGCGAG+AGG | + | chr4_4:1915515-1915534 | None:intergenic | 50.0% | |
| TCGCACATCCTAAGAAGGAG+AGG | - | chr4_4:1915516-1915535 | Msa0663230:intron | 50.0% | |
| CACATCCTAAGAAGGAGAGG+AGG | - | chr4_4:1915519-1915538 | Msa0663230:intron | 50.0% | |
| CATCCTAAGAAGGAGAGGAG+GGG | - | chr4_4:1915521-1915540 | Msa0663230:intron | 50.0% | |
| ATCCTAAGAAGGAGAGGAGG+GGG | - | chr4_4:1915522-1915541 | Msa0663230:intron | 50.0% | |
| TGTTTCCTCTCACGCATCCT+CGG | - | chr4_4:1915550-1915569 | Msa0663230:intron | 50.0% | |
| GCATCCTCGGAAAGGGAAAA+TGG | - | chr4_4:1915563-1915582 | Msa0663230:intron | 50.0% | |
| ! | TCTCCCATTTTCCCTTTCCG+AGG | + | chr4_4:1915570-1915589 | None:intergenic | 50.0% |
| AATAGAGTCGGACCAGTCGA+TGG | - | chr4_4:1915840-1915859 | Msa0663230:intron | 50.0% | |
| GCTGAGTCTTTCGAGCTTCT+TGG | + | chr4_4:1915899-1915918 | None:intergenic | 50.0% | |
| CTTGGGTAATCTTCGAGTGG+CGG | + | chr4_4:1915940-1915959 | None:intergenic | 50.0% | |
| GAAGGGTAGCTAAGGTTGTG+AGG | + | chr4_4:1918758-1918777 | None:intergenic | 50.0% | |
| AGGTGGGGTTGTGTATAGGT+GGG | + | chr4_4:1918841-1918860 | None:intergenic | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | - | chr4_4:1919854-1919873 | Msa0663230:intron | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | + | chr4_4:1919859-1919878 | None:intergenic | 50.0% | |
| GACACTCTTGCTTTGACCTC+TGG | + | chr4_4:1920873-1920892 | None:intergenic | 50.0% | |
| ! | ACTGCTAACTTGTGCCCTCA+AGG | - | chr4_4:1921297-1921316 | Msa0663230:CDS | 50.0% |
| ! | CTGCTAACTTGTGCCCTCAA+GGG | - | chr4_4:1921298-1921317 | Msa0663230:CDS | 50.0% |
| ! | GTCTGCTAACTTGTGCCCTT+AGG | + | chr4_4:1921446-1921465 | None:intergenic | 50.0% |
| AAGGGTGGTTGAGGTTGTGG+AGG | + | chr4_4:1910487-1910506 | None:intergenic | 55.0% | |
| GAGAAGGGTGGTTGAGGTTG+TGG | + | chr4_4:1910490-1910509 | None:intergenic | 55.0% | |
| ATAGATGCCCCATGTGCGGA+TGG | - | chr4_4:1911306-1911325 | Msa0663230:CDS | 55.0% | |
| CAGAAAGCCATCCGCACATG+GGG | + | chr4_4:1911316-1911335 | None:intergenic | 55.0% | |
| CACAGAAAGCCATCCGCACA+TGG | + | chr4_4:1911318-1911337 | None:intergenic | 55.0% | |
| ATGTCTAACCTGGGCAACGC+CGG | - | chr4_4:1912162-1912181 | Msa0663230:intron | 55.0% | |
| !!! | TTTTTTACCCGGCGTTGCCC+AGG | + | chr4_4:1912173-1912192 | None:intergenic | 55.0% |
| CAGAAAGGGCCACCGTACTT+TGG | - | chr4_4:1914878-1914897 | Msa0663230:intron | 55.0% | |
| GAAAGGGCCACCGTACTTTG+GGG | - | chr4_4:1914880-1914899 | Msa0663230:intron | 55.0% | |
| AAAGGGCCACCGTACTTTGG+GGG | - | chr4_4:1914881-1914900 | Msa0663230:intron | 55.0% | |
| CTCTCACGCATCCTCGGAAA+GGG | - | chr4_4:1915556-1915575 | Msa0663230:intron | 55.0% | |
| AGTCGGACCAGTCGATGGAA+GGG | - | chr4_4:1915845-1915864 | Msa0663230:intron | 55.0% | |
| !! | CTTCGAGTGGCGGTTTTTGG+AGG | + | chr4_4:1915930-1915949 | None:intergenic | 55.0% |
| GAGGTGAGTAGTATGGTGCG+TGG | + | chr4_4:1918739-1918758 | None:intergenic | 55.0% | |
| GAGGTGGGGTTGTGTATAGG+TGG | + | chr4_4:1918842-1918861 | None:intergenic | 55.0% | |
| GATGGACGACACTTCGATCC+TGG | - | chr4_4:1920707-1920726 | Msa0663230:intron | 55.0% | |
| TGTCTAACCTGGGCAACGCC+GGG | - | chr4_4:1912163-1912182 | Msa0663230:intron | 60.0% | |
| TTATGACCCGGGCGGTAGCA+CGG | - | chr4_4:1913039-1913058 | Msa0663230:intron | 60.0% | |
| ! | TTTTACCCGTGCTACCGCCC+GGG | + | chr4_4:1913048-1913067 | None:intergenic | 60.0% |
| ! | CTTTTACCCGTGCTACCGCC+CGG | + | chr4_4:1913049-1913068 | None:intergenic | 60.0% |
| CTCCCCCTCCTCTCCTTCTT+AGG | + | chr4_4:1915527-1915546 | None:intergenic | 60.0% | |
| CCTTTCCGAGGATGCGTGAG+AGG | + | chr4_4:1915558-1915577 | None:intergenic | 60.0% | |
| CCTCTCACGCATCCTCGGAA+AGG | - | chr4_4:1915555-1915574 | Msa0663230:intron | 60.0% | |
| GAGTCGGACCAGTCGATGGA+AGG | - | chr4_4:1915844-1915863 | Msa0663230:intron | 60.0% | |
| TGAAGCATGGGAAGGTCGCG+TGG | + | chr4_4:1917408-1917427 | None:intergenic | 60.0% | |
| TATGACCCGGGCGGTAGCAC+GGG | - | chr4_4:1913040-1913059 | Msa0663230:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 1910441 | 1921730 | 1910441 | ID=Msa0663230;Name=Msa0663230 |
| chr4_4 | mRNA | 1910441 | 1921730 | 1910441 | ID=Msa0663230-mRNA-1;Parent=Msa0663230;Name=Msa0663230-mRNA-1;_AED=0.25;_eAED=0.25;_QI=206|0.8|1|1|1|1|6|89|375 |
| chr4_4 | exon | 1910441 | 1910601 | 1910441 | ID=Msa0663230-mRNA-1:exon:528;Parent=Msa0663230-mRNA-1 |
| chr4_4 | exon | 1911125 | 1911463 | 1911125 | ID=Msa0663230-mRNA-1:exon:527;Parent=Msa0663230-mRNA-1 |
| chr4_4 | exon | 1912894 | 1913052 | 1912894 | ID=Msa0663230-mRNA-1:exon:526;Parent=Msa0663230-mRNA-1 |
| chr4_4 | exon | 1918302 | 1918640 | 1918302 | ID=Msa0663230-mRNA-1:exon:525;Parent=Msa0663230-mRNA-1 |
| chr4_4 | exon | 1921192 | 1921368 | 1921192 | ID=Msa0663230-mRNA-1:exon:524;Parent=Msa0663230-mRNA-1 |
| chr4_4 | exon | 1921483 | 1921730 | 1921483 | ID=Msa0663230-mRNA-1:exon:523;Parent=Msa0663230-mRNA-1 |
| chr4_4 | five_prime_UTR | 1921525 | 1921730 | 1921525 | ID=Msa0663230-mRNA-1:five_prime_utr;Parent=Msa0663230-mRNA-1 |
| chr4_4 | CDS | 1921483 | 1921524 | 1921483 | ID=Msa0663230-mRNA-1:cds;Parent=Msa0663230-mRNA-1 |
| chr4_4 | CDS | 1921192 | 1921368 | 1921192 | ID=Msa0663230-mRNA-1:cds;Parent=Msa0663230-mRNA-1 |
| chr4_4 | CDS | 1918302 | 1918640 | 1918302 | ID=Msa0663230-mRNA-1:cds;Parent=Msa0663230-mRNA-1 |
| chr4_4 | CDS | 1912894 | 1913052 | 1912894 | ID=Msa0663230-mRNA-1:cds;Parent=Msa0663230-mRNA-1 |
| chr4_4 | CDS | 1911125 | 1911463 | 1911125 | ID=Msa0663230-mRNA-1:cds;Parent=Msa0663230-mRNA-1 |
| chr4_4 | CDS | 1910530 | 1910601 | 1910530 | ID=Msa0663230-mRNA-1:cds;Parent=Msa0663230-mRNA-1 |
| chr4_4 | three_prime_UTR | 1910441 | 1910529 | 1910441 | ID=Msa0663230-mRNA-1:three_prime_utr;Parent=Msa0663230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
