Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679830 | XP_013455787.1 | 94.834 | 271 | 14 | 0 | 1 | 271 | 1 | 271 | 0.0 | 526 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679830 | sp|K4N0V2|BDH_LAVIN | 61.832 | 262 | 92 | 2 | 6 | 267 | 1 | 254 | 2.44e-104 | 306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679830 | I3SBG4 | 94.834 | 271 | 14 | 0 | 1 | 271 | 1 | 271 | 0.0 | 526 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0641360 | Msa0679830 | 0.858402 | 8.442336e-63 | -8.615850e-47 |
| Msa0679830 | Msa0737190 | 0.801048 | 1.082128e-48 | -8.615850e-47 |
| Msa0679830 | Msa0739580 | 0.808158 | 3.553330e-50 | -8.615850e-47 |
| Msa0679830 | Msa0860280 | 0.811011 | 8.665361e-51 | -8.615850e-47 |
| Msa0679830 | Msa1179280 | 0.839962 | 1.157872e-57 | -8.615850e-47 |
| Msa0679830 | Msa1213500 | 0.804371 | 2.230425e-49 | -8.615850e-47 |
| Msa0679830 | Msa1228190 | 0.800864 | 1.180065e-48 | -8.615850e-47 |
| Msa0679830 | Msa1233560 | 0.830601 | 2.679499e-55 | -8.615850e-47 |
| Msa0679830 | Msa1313970 | 0.829415 | 5.214016e-55 | -8.615850e-47 |
| Msa0679830 | Msa1406780 | 0.804829 | 1.790052e-49 | -8.615850e-47 |
| Msa0679830 | Msa1431850 | 0.805340 | 1.399402e-49 | -8.615850e-47 |
| Msa0125090 | Msa0679830 | 0.800552 | 1.365951e-48 | -8.615850e-47 |
| Msa0220420 | Msa0679830 | 0.835847 | 1.321837e-56 | -8.615850e-47 |
| Msa0252770 | Msa0679830 | 0.802085 | 6.631386e-49 | -8.615850e-47 |
| Msa0306120 | Msa0679830 | 0.800056 | 1.723520e-48 | -8.615850e-47 |
| Msa0317510 | Msa0679830 | 0.805883 | 1.076573e-49 | -8.615850e-47 |
| Msa0322840 | Msa0679830 | 0.814060 | 1.866828e-51 | -8.615850e-47 |
| Msa0329620 | Msa0679830 | 0.806633 | 7.483563e-50 | -8.615850e-47 |
| Msa0545310 | Msa0679830 | 0.838401 | 2.938788e-57 | -8.615850e-47 |
| Msa0600900 | Msa0679830 | 0.824494 | 7.829063e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679830 | MtrunA17_Chr4g0026001 | 94.834 | 271 | 14 | 0 | 1 | 271 | 1 | 271 | 0.0 | 526 |
| Msa0679830 | MtrunA17_Chr4g0025971 | 83.026 | 271 | 46 | 0 | 1 | 271 | 1 | 271 | 1.57e-166 | 461 |
| Msa0679830 | MtrunA17_Chr4g0025981 | 79.693 | 261 | 51 | 1 | 6 | 266 | 35 | 293 | 2.32e-156 | 438 |
| Msa0679830 | MtrunA17_Chr4g0044111 | 59.160 | 262 | 104 | 1 | 12 | 270 | 11 | 272 | 5.63e-105 | 306 |
| Msa0679830 | MtrunA17_Chr7g0266981 | 59.160 | 262 | 104 | 1 | 12 | 270 | 11 | 272 | 8.16e-105 | 305 |
| Msa0679830 | MtrunA17_Chr7g0266891 | 58.462 | 260 | 105 | 1 | 14 | 270 | 7 | 266 | 5.18e-100 | 293 |
| Msa0679830 | MtrunA17_Chr4g0044131 | 55.894 | 263 | 108 | 4 | 12 | 268 | 6 | 266 | 1.15e-91 | 272 |
| Msa0679830 | MtrunA17_Chr7g0244061 | 52.015 | 273 | 108 | 4 | 12 | 262 | 27 | 298 | 1.58e-90 | 270 |
| Msa0679830 | MtrunA17_Chr7g0268591 | 51.351 | 259 | 117 | 3 | 12 | 262 | 31 | 288 | 1.21e-82 | 250 |
| Msa0679830 | MtrunA17_Chr7g0270441 | 50.579 | 259 | 122 | 3 | 12 | 266 | 4 | 260 | 3.22e-80 | 243 |
| Msa0679830 | MtrunA17_Chr3g0084871 | 50.923 | 271 | 123 | 3 | 8 | 268 | 10 | 280 | 4.29e-79 | 240 |
| Msa0679830 | MtrunA17_Chr7g0270451 | 50.196 | 255 | 122 | 3 | 12 | 262 | 4 | 257 | 2.15e-78 | 238 |
| Msa0679830 | MtrunA17_Chr2g0324021 | 49.804 | 255 | 123 | 3 | 12 | 262 | 4 | 257 | 3.47e-78 | 237 |
| Msa0679830 | MtrunA17_Chr7g0267001 | 50.570 | 263 | 104 | 5 | 12 | 268 | 6 | 248 | 6.12e-77 | 234 |
| Msa0679830 | MtrunA17_Chr7g0267011 | 61.413 | 184 | 71 | 0 | 12 | 195 | 6 | 189 | 7.34e-77 | 231 |
| Msa0679830 | MtrunA17_Chr7g0252031 | 50.190 | 263 | 120 | 4 | 12 | 264 | 33 | 294 | 1.32e-75 | 232 |
| Msa0679830 | MtrunA17_Chr6g0459261 | 45.420 | 262 | 137 | 4 | 1 | 257 | 13 | 273 | 2.15e-73 | 226 |
| Msa0679830 | MtrunA17_Chr7g0266991 | 52.137 | 234 | 92 | 2 | 8 | 238 | 19 | 235 | 5.63e-73 | 223 |
| Msa0679830 | MtrunA17_Chr4g0040371 | 46.970 | 264 | 126 | 4 | 10 | 262 | 15 | 275 | 5.93e-71 | 219 |
| Msa0679830 | MtrunA17_Chr6g0459331 | 45.802 | 262 | 136 | 4 | 1 | 257 | 1 | 261 | 3.93e-68 | 212 |
| Msa0679830 | MtrunA17_Chr6g0459301 | 44.400 | 250 | 134 | 3 | 13 | 257 | 13 | 262 | 2.20e-67 | 210 |
| Msa0679830 | MtrunA17_Chr6g0459281 | 45.968 | 248 | 129 | 3 | 13 | 255 | 12 | 259 | 2.57e-67 | 210 |
| Msa0679830 | MtrunA17_Chr6g0459271 | 44.275 | 262 | 140 | 4 | 1 | 257 | 1 | 261 | 4.08e-66 | 206 |
| Msa0679830 | MtrunA17_Chr6g0459351 | 44.355 | 248 | 133 | 3 | 13 | 255 | 12 | 259 | 1.92e-65 | 205 |
| Msa0679830 | MtrunA17_Chr4g0044121 | 54.749 | 179 | 78 | 1 | 95 | 270 | 1 | 179 | 2.63e-60 | 189 |
| Msa0679830 | MtrunA17_Chr6g0463951 | 49.419 | 172 | 82 | 3 | 95 | 262 | 1 | 171 | 1.88e-43 | 145 |
| Msa0679830 | MtrunA17_Chr7g0270471 | 50.685 | 146 | 68 | 2 | 123 | 264 | 3 | 148 | 1.20e-38 | 132 |
| Msa0679830 | MtrunA17_Chr3g0122901 | 31.923 | 260 | 157 | 7 | 10 | 259 | 71 | 320 | 1.13e-34 | 127 |
| Msa0679830 | MtrunA17_Chr3g0142651 | 43.939 | 132 | 69 | 1 | 95 | 221 | 1 | 132 | 1.02e-28 | 106 |
| Msa0679830 | MtrunA17_Chr7g0270461 | 52.041 | 98 | 47 | 0 | 12 | 109 | 44 | 141 | 3.08e-28 | 105 |
| Msa0679830 | MtrunA17_Chr1g0191751 | 33.721 | 258 | 155 | 7 | 13 | 259 | 100 | 352 | 1.13e-27 | 109 |
| Msa0679830 | MtrunA17_Chr4g0028921 | 31.559 | 263 | 168 | 7 | 14 | 267 | 11 | 270 | 3.29e-26 | 103 |
| Msa0679830 | MtrunA17_Chr7g0272961 | 30.233 | 258 | 164 | 7 | 13 | 259 | 39 | 291 | 6.06e-26 | 103 |
| Msa0679830 | MtrunA17_Chr4g0028911 | 30.798 | 263 | 170 | 7 | 14 | 267 | 11 | 270 | 1.44e-24 | 99.4 |
| Msa0679830 | MtrunA17_Chr8g0357481 | 31.227 | 269 | 159 | 7 | 14 | 265 | 14 | 273 | 4.37e-24 | 98.6 |
| Msa0679830 | MtrunA17_Chr4g0074511 | 31.274 | 259 | 161 | 8 | 13 | 259 | 39 | 292 | 3.31e-23 | 96.3 |
| Msa0679830 | MtrunA17_Chr3g0112261 | 32.422 | 256 | 154 | 9 | 14 | 259 | 19 | 265 | 5.19e-23 | 95.1 |
| Msa0679830 | MtrunA17_Chr0c30g0494101 | 30.888 | 259 | 160 | 8 | 13 | 259 | 39 | 290 | 1.79e-21 | 91.3 |
| Msa0679830 | MtrunA17_Chr3g0112271 | 30.000 | 260 | 163 | 8 | 14 | 264 | 17 | 266 | 2.94e-21 | 90.5 |
| Msa0679830 | MtrunA17_Chr7g0259521 | 28.114 | 281 | 161 | 10 | 1 | 262 | 1 | 259 | 7.43e-21 | 89.0 |
| Msa0679830 | MtrunA17_Chr1g0171831 | 29.880 | 251 | 161 | 6 | 11 | 247 | 11 | 260 | 2.71e-20 | 87.4 |
| Msa0679830 | MtrunA17_Chr3g0112151 | 30.000 | 260 | 163 | 10 | 14 | 264 | 86 | 335 | 1.06e-19 | 87.0 |
| Msa0679830 | MtrunA17_Chr4g0075531 | 27.668 | 253 | 167 | 7 | 12 | 257 | 5 | 248 | 1.36e-19 | 85.5 |
| Msa0679830 | MtrunA17_Chr3g0112171 | 30.000 | 260 | 163 | 12 | 14 | 264 | 15 | 264 | 1.86e-19 | 85.5 |
| Msa0679830 | MtrunA17_Chr7g0239511 | 29.927 | 274 | 169 | 10 | 1 | 259 | 1 | 266 | 2.75e-19 | 84.7 |
| Msa0679830 | MtrunA17_Chr4g0032141 | 29.344 | 259 | 166 | 10 | 14 | 264 | 56 | 305 | 6.08e-19 | 84.7 |
| Msa0679830 | MtrunA17_Chr4g0054341 | 31.156 | 199 | 132 | 4 | 15 | 211 | 3 | 198 | 1.69e-18 | 82.8 |
| Msa0679830 | MtrunA17_Chr4g0032181 | 31.156 | 199 | 118 | 8 | 70 | 259 | 59 | 247 | 2.67e-18 | 82.0 |
| Msa0679830 | MtrunA17_Chr4g0045041 | 31.225 | 253 | 146 | 10 | 16 | 253 | 6 | 245 | 4.78e-18 | 83.6 |
| Msa0679830 | MtrunA17_Chr7g0239491 | 29.572 | 257 | 161 | 9 | 14 | 258 | 15 | 263 | 7.89e-18 | 80.9 |
| Msa0679830 | MtrunA17_Chr3g0112141 | 28.571 | 259 | 168 | 10 | 14 | 264 | 17 | 266 | 1.26e-17 | 80.5 |
| Msa0679830 | MtrunA17_Chr4g0045061 | 29.482 | 251 | 153 | 7 | 16 | 253 | 6 | 245 | 1.38e-17 | 82.4 |
| Msa0679830 | MtrunA17_Chr7g0239481 | 30.916 | 262 | 154 | 9 | 14 | 259 | 15 | 265 | 1.80e-17 | 79.7 |
| Msa0679830 | MtrunA17_Chr7g0239451 | 28.938 | 273 | 171 | 10 | 1 | 258 | 1 | 265 | 2.40e-16 | 76.6 |
| Msa0679830 | MtrunA17_Chr7g0239501 | 28.727 | 275 | 171 | 10 | 1 | 259 | 1 | 266 | 1.60e-15 | 74.3 |
| Msa0679830 | MtrunA17_Chr8g0386171 | 27.715 | 267 | 132 | 11 | 14 | 235 | 52 | 302 | 2.17e-15 | 75.1 |
| Msa0679830 | MtrunA17_Chr7g0259531 | 26.087 | 253 | 174 | 5 | 14 | 257 | 11 | 259 | 4.50e-15 | 73.2 |
| Msa0679830 | MtrunA17_Chr8g0386201 | 27.358 | 212 | 144 | 6 | 16 | 222 | 47 | 253 | 1.93e-14 | 72.4 |
| Msa0679830 | MtrunA17_Chr3g0124471 | 30.481 | 187 | 108 | 5 | 18 | 195 | 30 | 203 | 7.08e-14 | 70.1 |
| Msa0679830 | MtrunA17_Chr3g0124481 | 30.058 | 173 | 100 | 4 | 31 | 195 | 29 | 188 | 3.97e-13 | 67.8 |
| Msa0679830 | MtrunA17_Chr4g0033091 | 29.534 | 193 | 127 | 5 | 17 | 202 | 27 | 217 | 6.82e-12 | 63.9 |
| Msa0679830 | MtrunA17_Chr1g0182511 | 25.993 | 277 | 169 | 9 | 1 | 256 | 1 | 262 | 7.73e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679830 | AT3G51680.1 | 52.920 | 274 | 108 | 6 | 12 | 266 | 30 | 301 | 1.89e-87 | 263 |
| Msa0679830 | AT1G52340.1 | 50.370 | 270 | 121 | 3 | 12 | 268 | 16 | 285 | 2.76e-81 | 246 |
| Msa0679830 | AT4G03140.1 | 51.765 | 255 | 114 | 3 | 12 | 258 | 76 | 329 | 2.98e-77 | 238 |
| Msa0679830 | AT2G47140.1 | 50.000 | 252 | 121 | 3 | 12 | 259 | 4 | 254 | 7.65e-77 | 234 |
| Msa0679830 | AT3G26770.1 | 50.000 | 256 | 118 | 4 | 12 | 258 | 39 | 293 | 1.97e-76 | 234 |
| Msa0679830 | AT3G26760.1 | 44.569 | 267 | 136 | 4 | 3 | 258 | 25 | 290 | 1.17e-72 | 225 |
| Msa0679830 | AT2G47130.1 | 48.031 | 254 | 120 | 5 | 13 | 259 | 5 | 253 | 1.35e-70 | 218 |
| Msa0679830 | AT3G29250.2 | 45.669 | 254 | 127 | 5 | 13 | 259 | 5 | 254 | 6.72e-68 | 211 |
| Msa0679830 | AT3G29250.3 | 45.669 | 254 | 127 | 5 | 13 | 259 | 41 | 290 | 2.14e-67 | 211 |
| Msa0679830 | AT2G47120.2 | 44.275 | 262 | 125 | 6 | 9 | 259 | 2 | 253 | 8.72e-67 | 208 |
| Msa0679830 | AT3G29250.1 | 45.174 | 259 | 130 | 6 | 9 | 259 | 38 | 292 | 1.61e-66 | 209 |
| Msa0679830 | AT2G47120.1 | 44.574 | 258 | 122 | 6 | 13 | 259 | 5 | 252 | 4.08e-66 | 207 |
| Msa0679830 | AT3G29260.1 | 44.841 | 252 | 133 | 4 | 12 | 259 | 4 | 253 | 4.67e-65 | 204 |
| Msa0679830 | AT3G42960.1 | 45.385 | 260 | 125 | 6 | 12 | 258 | 6 | 261 | 1.09e-55 | 181 |
| Msa0679830 | AT1G24360.1 | 30.588 | 255 | 165 | 6 | 11 | 259 | 71 | 319 | 4.88e-29 | 112 |
| Msa0679830 | AT1G63380.3 | 31.641 | 256 | 164 | 6 | 14 | 259 | 15 | 269 | 4.04e-27 | 106 |
| Msa0679830 | AT1G63380.4 | 31.641 | 256 | 164 | 6 | 14 | 259 | 19 | 273 | 4.65e-27 | 106 |
| Msa0679830 | AT1G63380.2 | 31.641 | 256 | 164 | 6 | 14 | 259 | 22 | 276 | 4.98e-27 | 106 |
| Msa0679830 | AT1G63380.1 | 31.641 | 256 | 164 | 6 | 14 | 259 | 17 | 271 | 5.12e-27 | 106 |
| Msa0679830 | AT3G55290.1 | 31.373 | 255 | 165 | 6 | 14 | 259 | 18 | 271 | 1.24e-26 | 105 |
| Msa0679830 | AT3G55290.2 | 31.373 | 255 | 165 | 6 | 14 | 259 | 17 | 270 | 1.24e-26 | 105 |
| Msa0679830 | AT2G30670.1 | 31.154 | 260 | 172 | 4 | 14 | 270 | 7 | 262 | 1.45e-26 | 104 |
| Msa0679830 | AT1G62610.3 | 30.859 | 256 | 166 | 6 | 14 | 259 | 15 | 269 | 3.27e-26 | 104 |
| Msa0679830 | AT1G62610.1 | 30.859 | 256 | 166 | 6 | 14 | 259 | 14 | 268 | 3.52e-26 | 103 |
| Msa0679830 | AT2G47150.1 | 32.422 | 256 | 114 | 9 | 14 | 268 | 1 | 198 | 3.70e-26 | 102 |
| Msa0679830 | AT1G62610.4 | 30.859 | 256 | 166 | 6 | 14 | 259 | 19 | 273 | 3.79e-26 | 103 |
| Msa0679830 | AT1G62610.2 | 30.859 | 256 | 166 | 6 | 14 | 259 | 13 | 267 | 4.25e-26 | 103 |
| Msa0679830 | AT3G05260.1 | 32.046 | 259 | 157 | 8 | 13 | 259 | 36 | 287 | 7.47e-26 | 103 |
| Msa0679830 | AT2G29340.2 | 30.709 | 254 | 169 | 4 | 14 | 264 | 7 | 256 | 1.34e-25 | 102 |
| Msa0679830 | AT2G29340.1 | 31.373 | 255 | 166 | 6 | 14 | 264 | 7 | 256 | 2.08e-25 | 102 |
| Msa0679830 | AT1G54870.1 | 31.159 | 276 | 166 | 9 | 1 | 259 | 65 | 333 | 2.83e-25 | 102 |
| Msa0679830 | AT3G55310.1 | 31.765 | 255 | 164 | 6 | 14 | 259 | 17 | 270 | 3.02e-25 | 101 |
| Msa0679830 | AT1G54870.2 | 31.159 | 276 | 166 | 9 | 1 | 259 | 67 | 335 | 3.07e-25 | 102 |
| Msa0679830 | AT2G29330.1 | 31.538 | 260 | 159 | 8 | 14 | 264 | 7 | 256 | 7.91e-25 | 100 |
| Msa0679830 | AT2G29310.1 | 31.679 | 262 | 168 | 7 | 14 | 270 | 7 | 262 | 1.38e-24 | 99.4 |
| Msa0679830 | AT3G46170.1 | 30.385 | 260 | 163 | 7 | 13 | 259 | 25 | 279 | 9.47e-24 | 97.8 |
| Msa0679830 | AT2G17845.1 | 29.119 | 261 | 166 | 7 | 14 | 259 | 47 | 303 | 3.59e-23 | 96.7 |
| Msa0679830 | AT2G29300.1 | 31.373 | 255 | 159 | 8 | 14 | 259 | 7 | 254 | 6.41e-23 | 95.1 |
| Msa0679830 | AT1G07450.1 | 29.804 | 255 | 169 | 7 | 14 | 264 | 8 | 256 | 7.68e-23 | 94.7 |
| Msa0679830 | AT1G07440.1 | 30.000 | 260 | 162 | 9 | 14 | 264 | 12 | 260 | 1.91e-22 | 94.0 |
| Msa0679830 | AT2G29300.2 | 31.102 | 254 | 159 | 8 | 14 | 258 | 7 | 253 | 2.68e-22 | 94.0 |
| Msa0679830 | AT5G06060.1 | 29.615 | 260 | 164 | 9 | 14 | 264 | 9 | 258 | 8.94e-22 | 92.0 |
| Msa0679830 | AT2G29320.1 | 30.798 | 263 | 164 | 9 | 11 | 264 | 10 | 263 | 7.07e-21 | 89.7 |
| Msa0679830 | AT4G05530.1 | 32.549 | 255 | 152 | 10 | 12 | 257 | 7 | 250 | 2.86e-20 | 87.8 |
| Msa0679830 | AT2G29290.2 | 28.346 | 254 | 175 | 4 | 14 | 264 | 7 | 256 | 6.41e-20 | 87.0 |
| Msa0679830 | AT2G29340.3 | 31.795 | 195 | 128 | 3 | 14 | 205 | 7 | 199 | 6.69e-20 | 85.5 |
| Msa0679830 | AT2G29340.4 | 31.795 | 195 | 128 | 3 | 14 | 205 | 7 | 199 | 6.69e-20 | 85.5 |
| Msa0679830 | AT2G29150.1 | 30.566 | 265 | 154 | 11 | 14 | 264 | 16 | 264 | 1.34e-19 | 86.3 |
| Msa0679830 | AT2G29260.1 | 28.044 | 271 | 178 | 9 | 2 | 264 | 56 | 317 | 1.92e-19 | 86.7 |
| Msa0679830 | AT2G29370.1 | 28.571 | 259 | 168 | 7 | 14 | 264 | 16 | 265 | 2.05e-19 | 85.5 |
| Msa0679830 | AT3G12800.1 | 32.046 | 259 | 159 | 7 | 14 | 259 | 10 | 264 | 3.12e-19 | 85.5 |
| Msa0679830 | AT2G29350.1 | 29.134 | 254 | 172 | 5 | 14 | 264 | 15 | 263 | 4.44e-19 | 84.7 |
| Msa0679830 | AT5G18210.1 | 28.464 | 267 | 167 | 10 | 7 | 257 | 1 | 259 | 9.55e-19 | 83.6 |
| Msa0679830 | AT5G50700.1 | 28.509 | 228 | 150 | 6 | 14 | 235 | 45 | 265 | 1.01e-18 | 85.1 |
| Msa0679830 | AT5G50600.1 | 28.509 | 228 | 150 | 6 | 14 | 235 | 45 | 265 | 1.01e-18 | 85.1 |
| Msa0679830 | AT2G29310.3 | 32.308 | 195 | 127 | 3 | 14 | 205 | 7 | 199 | 4.47e-18 | 80.5 |
| Msa0679830 | AT5G50770.1 | 31.839 | 223 | 143 | 8 | 16 | 233 | 47 | 265 | 5.37e-18 | 82.8 |
| Msa0679830 | AT5G10050.1 | 29.508 | 183 | 121 | 4 | 15 | 195 | 6 | 182 | 1.61e-17 | 80.5 |
| Msa0679830 | AT5G50590.2 | 33.333 | 183 | 103 | 6 | 13 | 185 | 44 | 217 | 3.26e-17 | 79.3 |
| Msa0679830 | AT5G50690.2 | 33.333 | 183 | 103 | 6 | 13 | 185 | 44 | 217 | 3.26e-17 | 79.3 |
| Msa0679830 | AT2G29360.1 | 28.736 | 261 | 165 | 8 | 14 | 264 | 16 | 265 | 4.88e-17 | 79.3 |
| Msa0679830 | AT2G29310.2 | 29.258 | 229 | 153 | 6 | 36 | 259 | 27 | 251 | 6.00e-17 | 78.6 |
| Msa0679830 | AT5G50590.1 | 33.333 | 183 | 103 | 6 | 13 | 185 | 44 | 217 | 6.50e-17 | 79.3 |
| Msa0679830 | AT5G50690.1 | 33.333 | 183 | 103 | 6 | 13 | 185 | 44 | 217 | 6.50e-17 | 79.3 |
| Msa0679830 | AT4G13180.1 | 29.779 | 272 | 169 | 9 | 1 | 259 | 1 | 263 | 8.12e-17 | 78.6 |
| Msa0679830 | AT1G10310.1 | 30.097 | 206 | 141 | 3 | 3 | 207 | 4 | 207 | 1.27e-16 | 77.4 |
| Msa0679830 | AT1G49670.2 | 31.373 | 204 | 122 | 5 | 16 | 204 | 6 | 206 | 1.41e-16 | 79.7 |
| Msa0679830 | AT5G65205.1 | 30.601 | 183 | 119 | 4 | 15 | 195 | 7 | 183 | 1.56e-16 | 77.8 |
| Msa0679830 | AT1G49670.1 | 31.373 | 204 | 122 | 5 | 16 | 204 | 6 | 206 | 1.60e-16 | 79.7 |
| Msa0679830 | AT5G18210.2 | 28.261 | 276 | 169 | 11 | 7 | 266 | 1 | 263 | 3.93e-16 | 76.6 |
| Msa0679830 | AT3G47350.2 | 28.856 | 201 | 127 | 6 | 16 | 208 | 46 | 238 | 2.15e-15 | 75.1 |
| Msa0679830 | AT3G47350.1 | 28.856 | 201 | 127 | 6 | 16 | 208 | 46 | 238 | 2.35e-15 | 75.1 |
| Msa0679830 | AT2G29290.1 | 27.551 | 196 | 137 | 3 | 70 | 264 | 48 | 239 | 3.20e-14 | 70.9 |
| Msa0679830 | AT2G29350.3 | 29.082 | 196 | 133 | 4 | 70 | 264 | 35 | 225 | 3.48e-14 | 70.5 |
| Msa0679830 | AT2G29320.3 | 30.542 | 203 | 127 | 6 | 11 | 205 | 10 | 206 | 1.05e-13 | 68.9 |
| Msa0679830 | AT2G29350.2 | 29.744 | 195 | 132 | 3 | 14 | 205 | 15 | 207 | 2.46e-13 | 68.2 |
| Msa0679830 | AT3G47360.1 | 30.208 | 192 | 118 | 6 | 17 | 200 | 48 | 231 | 3.05e-13 | 68.9 |
| Msa0679830 | AT5G04900.1 | 30.366 | 191 | 125 | 3 | 20 | 202 | 83 | 273 | 5.70e-11 | 62.4 |
Find 74 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTGAAGCTGCTTTGTATT+TGG | 0.166719 | 4_4:-38337143 | Msa0679830:CDS |
| TGCAACTTGTTTACCTTCTT+AGG | 0.212297 | 4_4:+38338370 | None:intergenic |
| GCAGCTTCAGCCACATCTTT+TGG | 0.258023 | 4_4:+38337154 | None:intergenic |
| ACCCCACTATGAATAAAATT+TGG | 0.267742 | 4_4:-38336896 | Msa0679830:three_prime_UTR |
| GCTGAAGCTGCTTTGTATTT+GGG | 0.312530 | 4_4:-38337142 | Msa0679830:CDS |
| GATGTCTAGTTTACCGTACT+TGG | 0.377024 | 4_4:+38337576 | None:intergenic |
| TTTAACAACGCAGGCATAAC+CGG | 0.377917 | 4_4:-38337550 | Msa0679830:CDS |
| ATTATGCTACCTCGTCGAAC+GGG | 0.382112 | 4_4:+38337415 | None:intergenic |
| GGGCTCACGGTCGAAAATAA+TGG | 0.383566 | 4_4:-38337070 | Msa0679830:CDS |
| AACTTGGCTGGTGTATTTCT+CGG | 0.386916 | 4_4:-38337466 | Msa0679830:CDS |
| ACCCATGGCAAGCGTTCCTT+TGG | 0.387041 | 4_4:-38338403 | Msa0679830:exon |
| AGGGGTTTATTCTAATCTAA+AGG | 0.394298 | 4_4:-38337191 | Msa0679830:CDS |
| GGGGTTTATTCTAATCTAAA+GGG | 0.410132 | 4_4:-38337190 | Msa0679830:CDS |
| AATTGATTTGCAAGGCTTGA+AGG | 0.412288 | 4_4:-38337811 | Msa0679830:intron |
| ATTAACACAGCTAGTGTTTG+TGG | 0.418206 | 4_4:-38337394 | Msa0679830:CDS |
| TTCTTTAAGCTTGATGATGA+TGG | 0.418334 | 4_4:-38337220 | Msa0679830:CDS |
| GGTCATAATCTGGTCATAGA+TGG | 0.437032 | 4_4:-38337094 | Msa0679830:CDS |
| GCAACTTGTTTACCTTCTTA+GGG | 0.438236 | 4_4:+38338371 | None:intergenic |
| TGTGTGTCACCTTATGTTGT+TGG | 0.443444 | 4_4:-38337262 | Msa0679830:CDS |
| GTATGTTAGTGGTCATAATC+TGG | 0.450617 | 4_4:-38337104 | Msa0679830:CDS |
| AGTTCAAAGCACGCCGTTGT+TGG | 0.452888 | 4_4:-38337337 | Msa0679830:CDS |
| AACACTACCGTTTCCAAGTA+CGG | 0.459737 | 4_4:-38337589 | Msa0679830:CDS |
| GTTCAAAGCACGCCGTTGTT+GGG | 0.466302 | 4_4:-38337336 | Msa0679830:CDS |
| TGGTTTCTGCTGCCCTAAGA+AGG | 0.468552 | 4_4:-38338383 | Msa0679830:intron |
| GAGAAGATTTGTGTAACTCT+TGG | 0.471576 | 4_4:+38337665 | None:intergenic |
| CTTGGAAACGGTAGTGTTCA+CGG | 0.474967 | 4_4:+38337594 | None:intergenic |
| TTCATATAAATACTAACTCT+TGG | 0.480964 | 4_4:-38338478 | None:intergenic |
| AAAACAAAATTGTTATCTAA+AGG | 0.482178 | 4_4:+38336855 | None:intergenic |
| GATGAGTCGAAGTATGTTAG+TGG | 0.487950 | 4_4:-38337115 | Msa0679830:CDS |
| TCGGAACAAAACACGCTGCT+AGG | 0.488852 | 4_4:-38337447 | Msa0679830:CDS |
| ACAGGTGGTGCGAGCGGCAT+CGG | 0.490938 | 4_4:-38337772 | Msa0679830:CDS |
| ATTGATTTGCAAGGCTTGAA+GGG | 0.500137 | 4_4:-38337810 | Msa0679830:intron |
| AACGGAGTTCCAACAACATA+AGG | 0.500717 | 4_4:+38337253 | None:intergenic |
| TGTCCATTGTGACGTAAGAA+AGG | 0.504465 | 4_4:-38337635 | Msa0679830:CDS |
| AGAAGTGATTGACATTAACT+TGG | 0.510820 | 4_4:-38337482 | Msa0679830:CDS |
| CTTGTAAGTTGCGTCAAAGC+TGG | 0.515413 | 4_4:-38336920 | Msa0679830:three_prime_UTR |
| TAGTTTACCGTACTTGGAAA+CGG | 0.518542 | 4_4:+38337582 | None:intergenic |
| AACCAAAGGAACGCTTGCCA+TGG | 0.523073 | 4_4:+38338401 | None:intergenic |
| TTATGTTGTTGGAACTCCGT+TGG | 0.530258 | 4_4:-38337251 | Msa0679830:CDS |
| CGGAACAAAACACGCTGCTA+GGG | 0.533738 | 4_4:-38337446 | Msa0679830:CDS |
| GGGAAAGTAGCTCTGATCAC+AGG | 0.540590 | 4_4:-38337790 | Msa0679830:CDS |
| TTAAAGAAATTCTTAGCCAA+CGG | 0.547896 | 4_4:+38337235 | None:intergenic |
| AACGACTTGAGCTCCGTGGT+TGG | 0.548195 | 4_4:+38337726 | None:intergenic |
| TCTTACGTCACAATGGACAT+AGG | 0.551868 | 4_4:+38337639 | None:intergenic |
| GTGATTGACATTAACTTGGC+TGG | 0.556342 | 4_4:-38337478 | Msa0679830:CDS |
| AGCTGATATTCAAGATGACA+TGG | 0.557757 | 4_4:-38337701 | Msa0679830:CDS |
| GCCATCGAACTTGGACCGTA+CGG | 0.569072 | 4_4:-38337298 | Msa0679830:CDS |
| ACCAAAGGAACGCTTGCCAT+GGG | 0.575522 | 4_4:+38338402 | None:intergenic |
| CATAATCTGGTCATAGATGG+AGG | 0.576945 | 4_4:-38337091 | Msa0679830:CDS |
| AATTATGCTACCTCGTCGAA+CGG | 0.577311 | 4_4:+38337414 | None:intergenic |
| GCAAGACTCTTCTCCAACCA+CGG | 0.582010 | 4_4:-38337739 | Msa0679830:CDS |
| CTGATCACAGGTGGTGCGAG+CGG | 0.585318 | 4_4:-38337778 | Msa0679830:CDS |
| CATATATCTAAGTATACGTA+CGG | 0.594701 | 4_4:+38337010 | None:intergenic |
| AGTGTTTGTGGATGCATAGG+TGG | 0.595612 | 4_4:-38337382 | Msa0679830:CDS |
| ACCGTACGGTCCAAGTTCGA+TGG | 0.596833 | 4_4:+38337297 | None:intergenic |
| GGTCATAGATGGAGGGCTCA+CGG | 0.600112 | 4_4:-38337083 | Msa0679830:CDS |
| GACATCATGTTTAACAACGC+AGG | 0.601580 | 4_4:-38337559 | Msa0679830:CDS |
| TTGTGGATGCATAGGTGGTG+TGG | 0.603697 | 4_4:-38337377 | Msa0679830:CDS |
| ACGTCACAATGGACATAGGT+AGG | 0.609477 | 4_4:+38337643 | None:intergenic |
| TTTCCTTTCTTACGTCACAA+TGG | 0.611758 | 4_4:+38337632 | None:intergenic |
| TTATGCTACCTCGTCGAACG+GGG | 0.611852 | 4_4:+38337416 | None:intergenic |
| TGGTGCGAGCGGCATCGGCG+AGG | 0.613425 | 4_4:-38337767 | Msa0679830:CDS |
| GCTAGTGTTTGTGGATGCAT+AGG | 0.616627 | 4_4:-38337385 | Msa0679830:CDS |
| TAATCTTATGCCAAAAGATG+TGG | 0.618201 | 4_4:-38337164 | Msa0679830:CDS |
| GGCGTGCTTTGAACTTGTGT+AGG | 0.622128 | 4_4:+38337345 | None:intergenic |
| AAAAGTGAAAAGCTCACCCA+TGG | 0.628928 | 4_4:-38338418 | Msa0679830:exon |
| ATAATCTGGTCATAGATGGA+GGG | 0.653603 | 4_4:-38337090 | Msa0679830:CDS |
| GTTGGAGAAGAGTCTTGCAG+TGG | 0.664924 | 4_4:+38337744 | None:intergenic |
| CAATTCACTCGAATACCGTA+CGG | 0.666332 | 4_4:+38337283 | None:intergenic |
| CTTAGGGCAGCAGAAACCAA+AGG | 0.669735 | 4_4:+38338387 | None:intergenic |
| AAAGTAGCTCTGATCACAGG+TGG | 0.672097 | 4_4:-38337787 | Msa0679830:CDS |
| GTAATGATCCCCGTTCGACG+AGG | 0.673490 | 4_4:-38337424 | Msa0679830:CDS |
| CTATAACGACTTGAGCTCCG+TGG | 0.687548 | 4_4:+38337722 | None:intergenic |
| GCTGATATTCAAGATGACAT+GGG | 0.689593 | 4_4:-38337700 | Msa0679830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTATTCTAATTTTTTTT+TGG | - | chr4_4:38337090-38337109 | Msa0679830:CDS | 10.0% |
| !!! | AAATTAATCATATTTGAAAT+AGG | + | chr4_4:38337337-38337356 | None:intergenic | 10.0% |
| !!! | GAATTATTCTAATTTTTTTT+TGG | - | chr4_4:38337090-38337109 | Msa0679830:CDS | 10.0% |
| !!! | AAATTAATCATATTTGAAAT+AGG | + | chr4_4:38337337-38337356 | None:intergenic | 10.0% |
| !!! | AATTTAACTTTGATATAGTT+TGG | - | chr4_4:38336975-38336994 | Msa0679830:three_prime_UTR | 15.0% |
| !!! | ATTTAACTTTGATATAGTTT+GGG | - | chr4_4:38336976-38336995 | Msa0679830:three_prime_UTR | 15.0% |
| !!! | TTTTATCTAATTTTTAAGCT+AGG | + | chr4_4:38337009-38337028 | None:intergenic | 15.0% |
| !!! | TATATTTTTATGTATGATTG+TGG | + | chr4_4:38337163-38337182 | None:intergenic | 15.0% |
| !!! | TTTTTTCTTTTGTTTTTTTG+AGG | + | chr4_4:38337394-38337413 | None:intergenic | 15.0% |
| !! | AAACAAAAGAAAAAAAAGTA+CGG | - | chr4_4:38337399-38337418 | Msa0679830:CDS | 15.0% |
| !! | AAAACAAAATTGTTATCTAA+AGG | + | chr4_4:38338430-38338449 | None:intergenic | 15.0% |
| !!! | AATTTAACTTTGATATAGTT+TGG | - | chr4_4:38336975-38336994 | Msa0679830:three_prime_UTR | 15.0% |
| !!! | ATTTAACTTTGATATAGTTT+GGG | - | chr4_4:38336976-38336995 | Msa0679830:three_prime_UTR | 15.0% |
| !!! | TTTTATCTAATTTTTAAGCT+AGG | + | chr4_4:38337009-38337028 | None:intergenic | 15.0% |
| !!! | TATATTTTTATGTATGATTG+TGG | + | chr4_4:38337163-38337182 | None:intergenic | 15.0% |
| !!! | TTTTTTCTTTTGTTTTTTTG+AGG | + | chr4_4:38337394-38337413 | None:intergenic | 15.0% |
| !! | AAACAAAAGAAAAAAAAGTA+CGG | - | chr4_4:38337399-38337418 | Msa0679830:CDS | 15.0% |
| !! | AAAACAAAATTGTTATCTAA+AGG | + | chr4_4:38338430-38338449 | None:intergenic | 15.0% |
| !! | TTGAATTAAATTTGTGTACA+TGG | - | chr4_4:38337031-38337050 | Msa0679830:exon | 20.0% |
| !!! | AAACAACTTCTATTTTTCTT+AGG | + | chr4_4:38337269-38337288 | None:intergenic | 20.0% |
| !!! | TGTTCAAAAGTTTTTATCTT+TGG | + | chr4_4:38337360-38337379 | None:intergenic | 20.0% |
| !! | ACAATTAATTTCAGTTACAA+AGG | + | chr4_4:38337428-38337447 | None:intergenic | 20.0% |
| !! | TTGAATTAAATTTGTGTACA+TGG | - | chr4_4:38337031-38337050 | Msa0679830:exon | 20.0% |
| !!! | AAACAACTTCTATTTTTCTT+AGG | + | chr4_4:38337269-38337288 | None:intergenic | 20.0% |
| !!! | TGTTCAAAAGTTTTTATCTT+TGG | + | chr4_4:38337360-38337379 | None:intergenic | 20.0% |
| !! | ACAATTAATTTCAGTTACAA+AGG | + | chr4_4:38337428-38337447 | None:intergenic | 20.0% |
| !!! | ATATTACTCTGAAGTTTGTT+TGG | + | chr4_4:38337066-38337085 | None:intergenic | 25.0% |
| !! | ATTTTTATGTATGATTGTGG+AGG | + | chr4_4:38337160-38337179 | None:intergenic | 25.0% |
| !!! | TAACTTGTTTTCAAGTATGT+TGG | + | chr4_4:38337769-38337788 | None:intergenic | 25.0% |
| ! | TTAAAGAAATTCTTAGCCAA+CGG | + | chr4_4:38338050-38338069 | None:intergenic | 25.0% |
| ! | CATATATCTAAGTATACGTA+CGG | + | chr4_4:38338275-38338294 | None:intergenic | 25.0% |
| !! | TGCCAAATTTTATTCATAGT+GGG | + | chr4_4:38338391-38338410 | None:intergenic | 25.0% |
| !! | TTGCCAAATTTTATTCATAG+TGG | + | chr4_4:38338392-38338411 | None:intergenic | 25.0% |
| !!! | ATATTACTCTGAAGTTTGTT+TGG | + | chr4_4:38337066-38337085 | None:intergenic | 25.0% |
| !! | ATTTTTATGTATGATTGTGG+AGG | + | chr4_4:38337160-38337179 | None:intergenic | 25.0% |
| !!! | TAACTTGTTTTCAAGTATGT+TGG | + | chr4_4:38337769-38337788 | None:intergenic | 25.0% |
| ! | TTAAAGAAATTCTTAGCCAA+CGG | + | chr4_4:38338050-38338069 | None:intergenic | 25.0% |
| ! | CATATATCTAAGTATACGTA+CGG | + | chr4_4:38338275-38338294 | None:intergenic | 25.0% |
| !! | TGCCAAATTTTATTCATAGT+GGG | + | chr4_4:38338391-38338410 | None:intergenic | 25.0% |
| !! | TTGCCAAATTTTATTCATAG+TGG | + | chr4_4:38338392-38338411 | None:intergenic | 25.0% |
| AACTTTGATATAGTTTGGGT+TGG | - | chr4_4:38336980-38336999 | Msa0679830:three_prime_UTR | 30.0% | |
| ! | AGTAAAATGAGTCTAAGATG+TGG | + | chr4_4:38337191-38337210 | None:intergenic | 30.0% |
| AGAAGTGATTGACATTAACT+TGG | - | chr4_4:38337800-38337819 | Msa0679830:CDS | 30.0% | |
| !! | TTCTTTAAGCTTGATGATGA+TGG | - | chr4_4:38338062-38338081 | Msa0679830:intron | 30.0% |
| !!! | TTGATGATGATGGAGTTTTA+GGG | - | chr4_4:38338072-38338091 | Msa0679830:intron | 30.0% |
| AGGGGTTTATTCTAATCTAA+AGG | - | chr4_4:38338091-38338110 | Msa0679830:intron | 30.0% | |
| GGGGTTTATTCTAATCTAAA+GGG | - | chr4_4:38338092-38338111 | Msa0679830:intron | 30.0% | |
| TAATCTTATGCCAAAAGATG+TGG | - | chr4_4:38338118-38338137 | Msa0679830:intron | 30.0% | |
| ACCCCACTATGAATAAAATT+TGG | - | chr4_4:38338386-38338405 | Msa0679830:CDS | 30.0% | |
| ! | GCCAAATTTTATTCATAGTG+GGG | + | chr4_4:38338390-38338409 | None:intergenic | 30.0% |
| AACTTTGATATAGTTTGGGT+TGG | - | chr4_4:38336980-38336999 | Msa0679830:three_prime_UTR | 30.0% | |
| ! | AGTAAAATGAGTCTAAGATG+TGG | + | chr4_4:38337191-38337210 | None:intergenic | 30.0% |
| AGAAGTGATTGACATTAACT+TGG | - | chr4_4:38337800-38337819 | Msa0679830:CDS | 30.0% | |
| !! | TTCTTTAAGCTTGATGATGA+TGG | - | chr4_4:38338062-38338081 | Msa0679830:intron | 30.0% |
| !!! | TTGATGATGATGGAGTTTTA+GGG | - | chr4_4:38338072-38338091 | Msa0679830:intron | 30.0% |
| AGGGGTTTATTCTAATCTAA+AGG | - | chr4_4:38338091-38338110 | Msa0679830:intron | 30.0% | |
| GGGGTTTATTCTAATCTAAA+GGG | - | chr4_4:38338092-38338111 | Msa0679830:intron | 30.0% | |
| TAATCTTATGCCAAAAGATG+TGG | - | chr4_4:38338118-38338137 | Msa0679830:intron | 30.0% | |
| ACCCCACTATGAATAAAATT+TGG | - | chr4_4:38338386-38338405 | Msa0679830:CDS | 30.0% | |
| ! | GCCAAATTTTATTCATAGTG+GGG | + | chr4_4:38338390-38338409 | None:intergenic | 30.0% |
| ! | GCAACTTGTTTACCTTCTTA+GGG | + | chr4_4:38336914-38336933 | None:intergenic | 35.0% |
| ! | TGCAACTTGTTTACCTTCTT+AGG | + | chr4_4:38336915-38336934 | None:intergenic | 35.0% |
| GCTGCATCATCATACATAAA+AGG | + | chr4_4:38336946-38336965 | None:intergenic | 35.0% | |
| !! | TCATGCTCAATTGATTTGCA+AGG | - | chr4_4:38337463-38337482 | Msa0679830:CDS | 35.0% |
| !! | AATTGATTTGCAAGGCTTGA+AGG | - | chr4_4:38337471-38337490 | Msa0679830:CDS | 35.0% |
| !! | ATTGATTTGCAAGGCTTGAA+GGG | - | chr4_4:38337472-38337491 | Msa0679830:CDS | 35.0% |
| AGCTGATATTCAAGATGACA+TGG | - | chr4_4:38337581-38337600 | Msa0679830:CDS | 35.0% | |
| GCTGATATTCAAGATGACAT+GGG | - | chr4_4:38337582-38337601 | Msa0679830:CDS | 35.0% | |
| GAGAAGATTTGTGTAACTCT+TGG | + | chr4_4:38337620-38337639 | None:intergenic | 35.0% | |
| TTTCCTTTCTTACGTCACAA+TGG | + | chr4_4:38337653-38337672 | None:intergenic | 35.0% | |
| TAGTTTACCGTACTTGGAAA+CGG | + | chr4_4:38337703-38337722 | None:intergenic | 35.0% | |
| !!! | TATGTTGGTTTTGTTTACGC+CGG | + | chr4_4:38337754-38337773 | None:intergenic | 35.0% |
| ATTAACACAGCTAGTGTTTG+TGG | - | chr4_4:38337888-38337907 | Msa0679830:intron | 35.0% | |
| ! | GTTTTTCATTAGCCCAACAA+CGG | + | chr4_4:38337961-38337980 | None:intergenic | 35.0% |
| !!! | CTTGATGATGATGGAGTTTT+AGG | - | chr4_4:38338071-38338090 | Msa0679830:intron | 35.0% |
| !!! | TGATGATGATGGAGTTTTAG+GGG | - | chr4_4:38338073-38338092 | Msa0679830:intron | 35.0% |
| GTATGTTAGTGGTCATAATC+TGG | - | chr4_4:38338178-38338197 | Msa0679830:intron | 35.0% | |
| ATAATCTGGTCATAGATGGA+GGG | - | chr4_4:38338192-38338211 | Msa0679830:intron | 35.0% | |
| ! | GCAACTTGTTTACCTTCTTA+GGG | + | chr4_4:38336914-38336933 | None:intergenic | 35.0% |
| ! | TGCAACTTGTTTACCTTCTT+AGG | + | chr4_4:38336915-38336934 | None:intergenic | 35.0% |
| GCTGCATCATCATACATAAA+AGG | + | chr4_4:38336946-38336965 | None:intergenic | 35.0% | |
| !! | TCATGCTCAATTGATTTGCA+AGG | - | chr4_4:38337463-38337482 | Msa0679830:CDS | 35.0% |
| !! | AATTGATTTGCAAGGCTTGA+AGG | - | chr4_4:38337471-38337490 | Msa0679830:CDS | 35.0% |
| !! | ATTGATTTGCAAGGCTTGAA+GGG | - | chr4_4:38337472-38337491 | Msa0679830:CDS | 35.0% |
| AGCTGATATTCAAGATGACA+TGG | - | chr4_4:38337581-38337600 | Msa0679830:CDS | 35.0% | |
| GCTGATATTCAAGATGACAT+GGG | - | chr4_4:38337582-38337601 | Msa0679830:CDS | 35.0% | |
| GAGAAGATTTGTGTAACTCT+TGG | + | chr4_4:38337620-38337639 | None:intergenic | 35.0% | |
| TTTCCTTTCTTACGTCACAA+TGG | + | chr4_4:38337653-38337672 | None:intergenic | 35.0% | |
| TAGTTTACCGTACTTGGAAA+CGG | + | chr4_4:38337703-38337722 | None:intergenic | 35.0% | |
| !!! | TATGTTGGTTTTGTTTACGC+CGG | + | chr4_4:38337754-38337773 | None:intergenic | 35.0% |
| ATTAACACAGCTAGTGTTTG+TGG | - | chr4_4:38337888-38337907 | Msa0679830:intron | 35.0% | |
| ! | GTTTTTCATTAGCCCAACAA+CGG | + | chr4_4:38337961-38337980 | None:intergenic | 35.0% |
| !!! | CTTGATGATGATGGAGTTTT+AGG | - | chr4_4:38338071-38338090 | Msa0679830:intron | 35.0% |
| !!! | TGATGATGATGGAGTTTTAG+GGG | - | chr4_4:38338073-38338092 | Msa0679830:intron | 35.0% |
| GTATGTTAGTGGTCATAATC+TGG | - | chr4_4:38338178-38338197 | Msa0679830:intron | 35.0% | |
| ATAATCTGGTCATAGATGGA+GGG | - | chr4_4:38338192-38338211 | Msa0679830:intron | 35.0% | |
| AAAAGTGAAAAGCTCACCCA+TGG | - | chr4_4:38336864-38336883 | Msa0679830:three_prime_UTR | 40.0% | |
| TCTTACGTCACAATGGACAT+AGG | + | chr4_4:38337646-38337665 | None:intergenic | 40.0% | |
| TGTCCATTGTGACGTAAGAA+AGG | - | chr4_4:38337647-38337666 | Msa0679830:CDS | 40.0% | |
| AACACTACCGTTTCCAAGTA+CGG | - | chr4_4:38337693-38337712 | Msa0679830:CDS | 40.0% | |
| ! | GATGTCTAGTTTACCGTACT+TGG | + | chr4_4:38337709-38337728 | None:intergenic | 40.0% |
| GACATCATGTTTAACAACGC+AGG | - | chr4_4:38337723-38337742 | Msa0679830:CDS | 40.0% | |
| TTTAACAACGCAGGCATAAC+CGG | - | chr4_4:38337732-38337751 | Msa0679830:CDS | 40.0% | |
| ! | GTGATTGACATTAACTTGGC+TGG | - | chr4_4:38337804-38337823 | Msa0679830:intron | 40.0% |
| AACTTGGCTGGTGTATTTCT+CGG | - | chr4_4:38337816-38337835 | Msa0679830:intron | 40.0% | |
| AATTATGCTACCTCGTCGAA+CGG | + | chr4_4:38337871-38337890 | None:intergenic | 40.0% | |
| AAAAACACAGCCATCGAACT+TGG | - | chr4_4:38337975-38337994 | Msa0679830:intron | 40.0% | |
| CAATTCACTCGAATACCGTA+CGG | + | chr4_4:38338002-38338021 | None:intergenic | 40.0% | |
| TGTGTGTCACCTTATGTTGT+TGG | - | chr4_4:38338020-38338039 | Msa0679830:intron | 40.0% | |
| AACGGAGTTCCAACAACATA+AGG | + | chr4_4:38338032-38338051 | None:intergenic | 40.0% | |
| TTATGTTGTTGGAACTCCGT+TGG | - | chr4_4:38338031-38338050 | Msa0679830:intron | 40.0% | |
| ! | GCTGAAGCTGCTTTGTATTT+GGG | - | chr4_4:38338140-38338159 | Msa0679830:intron | 40.0% |
| GATGAGTCGAAGTATGTTAG+TGG | - | chr4_4:38338167-38338186 | Msa0679830:intron | 40.0% | |
| GGTCATAATCTGGTCATAGA+TGG | - | chr4_4:38338188-38338207 | Msa0679830:intron | 40.0% | |
| CATAATCTGGTCATAGATGG+AGG | - | chr4_4:38338191-38338210 | Msa0679830:intron | 40.0% | |
| AAAAGTGAAAAGCTCACCCA+TGG | - | chr4_4:38336864-38336883 | Msa0679830:three_prime_UTR | 40.0% | |
| TCTTACGTCACAATGGACAT+AGG | + | chr4_4:38337646-38337665 | None:intergenic | 40.0% | |
| TGTCCATTGTGACGTAAGAA+AGG | - | chr4_4:38337647-38337666 | Msa0679830:CDS | 40.0% | |
| AACACTACCGTTTCCAAGTA+CGG | - | chr4_4:38337693-38337712 | Msa0679830:CDS | 40.0% | |
| ! | GATGTCTAGTTTACCGTACT+TGG | + | chr4_4:38337709-38337728 | None:intergenic | 40.0% |
| GACATCATGTTTAACAACGC+AGG | - | chr4_4:38337723-38337742 | Msa0679830:CDS | 40.0% | |
| TTTAACAACGCAGGCATAAC+CGG | - | chr4_4:38337732-38337751 | Msa0679830:CDS | 40.0% | |
| ! | GTGATTGACATTAACTTGGC+TGG | - | chr4_4:38337804-38337823 | Msa0679830:intron | 40.0% |
| AACTTGGCTGGTGTATTTCT+CGG | - | chr4_4:38337816-38337835 | Msa0679830:intron | 40.0% | |
| AATTATGCTACCTCGTCGAA+CGG | + | chr4_4:38337871-38337890 | None:intergenic | 40.0% | |
| AAAAACACAGCCATCGAACT+TGG | - | chr4_4:38337975-38337994 | Msa0679830:intron | 40.0% | |
| CAATTCACTCGAATACCGTA+CGG | + | chr4_4:38338002-38338021 | None:intergenic | 40.0% | |
| TGTGTGTCACCTTATGTTGT+TGG | - | chr4_4:38338020-38338039 | Msa0679830:intron | 40.0% | |
| AACGGAGTTCCAACAACATA+AGG | + | chr4_4:38338032-38338051 | None:intergenic | 40.0% | |
| TTATGTTGTTGGAACTCCGT+TGG | - | chr4_4:38338031-38338050 | Msa0679830:intron | 40.0% | |
| ! | GCTGAAGCTGCTTTGTATTT+GGG | - | chr4_4:38338140-38338159 | Msa0679830:intron | 40.0% |
| GATGAGTCGAAGTATGTTAG+TGG | - | chr4_4:38338167-38338186 | Msa0679830:intron | 40.0% | |
| GGTCATAATCTGGTCATAGA+TGG | - | chr4_4:38338188-38338207 | Msa0679830:intron | 40.0% | |
| CATAATCTGGTCATAGATGG+AGG | - | chr4_4:38338191-38338210 | Msa0679830:intron | 40.0% | |
| !! | AAAGTAGCTCTGATCACAGG+TGG | - | chr4_4:38337495-38337514 | Msa0679830:CDS | 45.0% |
| ACGTCACAATGGACATAGGT+AGG | + | chr4_4:38337642-38337661 | None:intergenic | 45.0% | |
| CTTGGAAACGGTAGTGTTCA+CGG | + | chr4_4:38337691-38337710 | None:intergenic | 45.0% | |
| ATTATGCTACCTCGTCGAAC+GGG | + | chr4_4:38337870-38337889 | None:intergenic | 45.0% | |
| GCTAGTGTTTGTGGATGCAT+AGG | - | chr4_4:38337897-38337916 | Msa0679830:intron | 45.0% | |
| AGTGTTTGTGGATGCATAGG+TGG | - | chr4_4:38337900-38337919 | Msa0679830:intron | 45.0% | |
| ! | GGCTGAAGCTGCTTTGTATT+TGG | - | chr4_4:38338139-38338158 | Msa0679830:intron | 45.0% |
| CTTGTAAGTTGCGTCAAAGC+TGG | - | chr4_4:38338362-38338381 | Msa0679830:intron | 45.0% | |
| !! | AAAGTAGCTCTGATCACAGG+TGG | - | chr4_4:38337495-38337514 | Msa0679830:CDS | 45.0% |
| ACGTCACAATGGACATAGGT+AGG | + | chr4_4:38337642-38337661 | None:intergenic | 45.0% | |
| CTTGGAAACGGTAGTGTTCA+CGG | + | chr4_4:38337691-38337710 | None:intergenic | 45.0% | |
| ATTATGCTACCTCGTCGAAC+GGG | + | chr4_4:38337870-38337889 | None:intergenic | 45.0% | |
| GCTAGTGTTTGTGGATGCAT+AGG | - | chr4_4:38337897-38337916 | Msa0679830:intron | 45.0% | |
| AGTGTTTGTGGATGCATAGG+TGG | - | chr4_4:38337900-38337919 | Msa0679830:intron | 45.0% | |
| ! | GGCTGAAGCTGCTTTGTATT+TGG | - | chr4_4:38338139-38338158 | Msa0679830:intron | 45.0% |
| CTTGTAAGTTGCGTCAAAGC+TGG | - | chr4_4:38338362-38338381 | Msa0679830:intron | 45.0% | |
| !!! | AATTATTCTAATTTTTTTTT+GGG | - | chr4_4:38337091-38337110 | Msa0679830:CDS | 5.0% |
| !!! | GTTTTTTTTTTTTTTTTTTA+AGG | - | chr4_4:38338313-38338332 | Msa0679830:intron | 5.0% |
| !!! | AATTATTCTAATTTTTTTTT+GGG | - | chr4_4:38337091-38337110 | Msa0679830:CDS | 5.0% |
| !!! | GTTTTTTTTTTTTTTTTTTA+AGG | - | chr4_4:38338313-38338332 | Msa0679830:intron | 5.0% |
| ACCAAAGGAACGCTTGCCAT+GGG | + | chr4_4:38336883-38336902 | None:intergenic | 50.0% | |
| AACCAAAGGAACGCTTGCCA+TGG | + | chr4_4:38336884-38336903 | None:intergenic | 50.0% | |
| CTTAGGGCAGCAGAAACCAA+AGG | + | chr4_4:38336898-38336917 | None:intergenic | 50.0% | |
| TGGTTTCTGCTGCCCTAAGA+AGG | - | chr4_4:38336899-38336918 | Msa0679830:three_prime_UTR | 50.0% | |
| !! | GGGAAAGTAGCTCTGATCAC+AGG | - | chr4_4:38337492-38337511 | Msa0679830:CDS | 50.0% |
| GTTGGAGAAGAGTCTTGCAG+TGG | + | chr4_4:38337541-38337560 | None:intergenic | 50.0% | |
| GCAAGACTCTTCTCCAACCA+CGG | - | chr4_4:38337543-38337562 | Msa0679830:CDS | 50.0% | |
| CTATAACGACTTGAGCTCCG+TGG | + | chr4_4:38337563-38337582 | None:intergenic | 50.0% | |
| TCGGAACAAAACACGCTGCT+AGG | - | chr4_4:38337835-38337854 | Msa0679830:intron | 50.0% | |
| CGGAACAAAACACGCTGCTA+GGG | - | chr4_4:38337836-38337855 | Msa0679830:intron | 50.0% | |
| TTATGCTACCTCGTCGAACG+GGG | + | chr4_4:38337869-38337888 | None:intergenic | 50.0% | |
| TTGTGGATGCATAGGTGGTG+TGG | - | chr4_4:38337905-38337924 | Msa0679830:intron | 50.0% | |
| ! | GGCGTGCTTTGAACTTGTGT+AGG | + | chr4_4:38337940-38337959 | None:intergenic | 50.0% |
| AGTTCAAAGCACGCCGTTGT+TGG | - | chr4_4:38337945-38337964 | Msa0679830:intron | 50.0% | |
| GTTCAAAGCACGCCGTTGTT+GGG | - | chr4_4:38337946-38337965 | Msa0679830:intron | 50.0% | |
| ! | GCAGCTTCAGCCACATCTTT+TGG | + | chr4_4:38338131-38338150 | None:intergenic | 50.0% |
| GGGCTCACGGTCGAAAATAA+TGG | - | chr4_4:38338212-38338231 | Msa0679830:intron | 50.0% | |
| ACCAAAGGAACGCTTGCCAT+GGG | + | chr4_4:38336883-38336902 | None:intergenic | 50.0% | |
| AACCAAAGGAACGCTTGCCA+TGG | + | chr4_4:38336884-38336903 | None:intergenic | 50.0% | |
| CTTAGGGCAGCAGAAACCAA+AGG | + | chr4_4:38336898-38336917 | None:intergenic | 50.0% | |
| TGGTTTCTGCTGCCCTAAGA+AGG | - | chr4_4:38336899-38336918 | Msa0679830:three_prime_UTR | 50.0% | |
| !! | GGGAAAGTAGCTCTGATCAC+AGG | - | chr4_4:38337492-38337511 | Msa0679830:CDS | 50.0% |
| GTTGGAGAAGAGTCTTGCAG+TGG | + | chr4_4:38337541-38337560 | None:intergenic | 50.0% | |
| GCAAGACTCTTCTCCAACCA+CGG | - | chr4_4:38337543-38337562 | Msa0679830:CDS | 50.0% | |
| CTATAACGACTTGAGCTCCG+TGG | + | chr4_4:38337563-38337582 | None:intergenic | 50.0% | |
| TCGGAACAAAACACGCTGCT+AGG | - | chr4_4:38337835-38337854 | Msa0679830:intron | 50.0% | |
| CGGAACAAAACACGCTGCTA+GGG | - | chr4_4:38337836-38337855 | Msa0679830:intron | 50.0% | |
| TTATGCTACCTCGTCGAACG+GGG | + | chr4_4:38337869-38337888 | None:intergenic | 50.0% | |
| TTGTGGATGCATAGGTGGTG+TGG | - | chr4_4:38337905-38337924 | Msa0679830:intron | 50.0% | |
| ! | GGCGTGCTTTGAACTTGTGT+AGG | + | chr4_4:38337940-38337959 | None:intergenic | 50.0% |
| AGTTCAAAGCACGCCGTTGT+TGG | - | chr4_4:38337945-38337964 | Msa0679830:intron | 50.0% | |
| GTTCAAAGCACGCCGTTGTT+GGG | - | chr4_4:38337946-38337965 | Msa0679830:intron | 50.0% | |
| ! | GCAGCTTCAGCCACATCTTT+TGG | + | chr4_4:38338131-38338150 | None:intergenic | 50.0% |
| GGGCTCACGGTCGAAAATAA+TGG | - | chr4_4:38338212-38338231 | Msa0679830:intron | 50.0% | |
| ACCCATGGCAAGCGTTCCTT+TGG | - | chr4_4:38336879-38336898 | Msa0679830:three_prime_UTR | 55.0% | |
| AACGACTTGAGCTCCGTGGT+TGG | + | chr4_4:38337559-38337578 | None:intergenic | 55.0% | |
| GTAATGATCCCCGTTCGACG+AGG | - | chr4_4:38337858-38337877 | Msa0679830:intron | 55.0% | |
| GCCATCGAACTTGGACCGTA+CGG | - | chr4_4:38337984-38338003 | Msa0679830:intron | 55.0% | |
| ACCGTACGGTCCAAGTTCGA+TGG | + | chr4_4:38337988-38338007 | None:intergenic | 55.0% | |
| GGTCATAGATGGAGGGCTCA+CGG | - | chr4_4:38338199-38338218 | Msa0679830:intron | 55.0% | |
| ACCCATGGCAAGCGTTCCTT+TGG | - | chr4_4:38336879-38336898 | Msa0679830:three_prime_UTR | 55.0% | |
| AACGACTTGAGCTCCGTGGT+TGG | + | chr4_4:38337559-38337578 | None:intergenic | 55.0% | |
| GTAATGATCCCCGTTCGACG+AGG | - | chr4_4:38337858-38337877 | Msa0679830:intron | 55.0% | |
| GCCATCGAACTTGGACCGTA+CGG | - | chr4_4:38337984-38338003 | Msa0679830:intron | 55.0% | |
| ACCGTACGGTCCAAGTTCGA+TGG | + | chr4_4:38337988-38338007 | None:intergenic | 55.0% | |
| GGTCATAGATGGAGGGCTCA+CGG | - | chr4_4:38338199-38338218 | Msa0679830:intron | 55.0% | |
| CTGATCACAGGTGGTGCGAG+CGG | - | chr4_4:38337504-38337523 | Msa0679830:CDS | 60.0% | |
| CTGATCACAGGTGGTGCGAG+CGG | - | chr4_4:38337504-38337523 | Msa0679830:CDS | 60.0% | |
| ACAGGTGGTGCGAGCGGCAT+CGG | - | chr4_4:38337510-38337529 | Msa0679830:CDS | 65.0% | |
| ACAGGTGGTGCGAGCGGCAT+CGG | - | chr4_4:38337510-38337529 | Msa0679830:CDS | 65.0% | |
| !! | TGGTGCGAGCGGCATCGGCG+AGG | - | chr4_4:38337515-38337534 | Msa0679830:CDS | 75.0% |
| !! | TGGTGCGAGCGGCATCGGCG+AGG | - | chr4_4:38337515-38337534 | Msa0679830:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 38336810 | 38338494 | 38336810 | ID=Msa0679830;Name=Msa0679830 |
| chr4_4 | mRNA | 38336810 | 38338494 | 38336810 | ID=Msa0679830-mRNA-1;Parent=Msa0679830;Name=Msa0679830-mRNA-1;_AED=0.01;_eAED=0.01;_QI=73|1|1|1|1|1|2|232|271 |
| chr4_4 | exon | 38336810 | 38337819 | 38336810 | ID=Msa0679830-mRNA-1:exon:9006;Parent=Msa0679830-mRNA-1 |
| chr4_4 | exon | 38338384 | 38338494 | 38338384 | ID=Msa0679830-mRNA-1:exon:9005;Parent=Msa0679830-mRNA-1 |
| chr4_4 | five_prime_UTR | 38338422 | 38338494 | 38338422 | ID=Msa0679830-mRNA-1:five_prime_utr;Parent=Msa0679830-mRNA-1 |
| chr4_4 | CDS | 38338384 | 38338421 | 38338384 | ID=Msa0679830-mRNA-1:cds;Parent=Msa0679830-mRNA-1 |
| chr4_4 | CDS | 38337042 | 38337819 | 38337042 | ID=Msa0679830-mRNA-1:cds;Parent=Msa0679830-mRNA-1 |
| chr4_4 | three_prime_UTR | 38336810 | 38337041 | 38336810 | ID=Msa0679830-mRNA-1:three_prime_utr;Parent=Msa0679830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
