Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125090 | XP_003590760.1 | 93.913 | 345 | 6 | 2 | 1 | 330 | 327 | 671 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125090 | sp|Q9SS87|SEOB_ARATH | 31.771 | 384 | 190 | 13 | 6 | 323 | 353 | 730 | 4.15e-53 | 189 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125090 | E2FKJ6 | 93.913 | 345 | 6 | 2 | 1 | 330 | 327 | 671 | 0.0 | 661 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0125090 | -0.809946 | 1.471733e-50 | -8.615850e-47 |
| Msa0007080 | Msa0125090 | 0.805456 | 1.323383e-49 | -8.615850e-47 |
| Msa0011500 | Msa0125090 | 0.800537 | 1.375684e-48 | -8.615850e-47 |
| Msa0012060 | Msa0125090 | 0.828109 | 1.079259e-54 | -8.615850e-47 |
| Msa0017510 | Msa0125090 | 0.847676 | 9.945955e-60 | -8.615850e-47 |
| Msa0029880 | Msa0125090 | 0.920642 | 9.873966e-88 | -8.615850e-47 |
| Msa0029890 | Msa0125090 | 0.893326 | 6.975213e-75 | -8.615850e-47 |
| Msa0029900 | Msa0125090 | 0.827053 | 1.934776e-54 | -8.615850e-47 |
| Msa0029910 | Msa0125090 | 0.832381 | 9.765592e-56 | -8.615850e-47 |
| Msa0033440 | Msa0125090 | 0.803899 | 2.796456e-49 | -8.615850e-47 |
| Msa0036920 | Msa0125090 | 0.804847 | 1.774493e-49 | -8.615850e-47 |
| Msa0040450 | Msa0125090 | 0.818090 | 2.350526e-52 | -8.615850e-47 |
| Msa0068680 | Msa0125090 | 0.815285 | 9.999479e-52 | -8.615850e-47 |
| Msa0077120 | Msa0125090 | 0.815192 | 1.048769e-51 | -8.615850e-47 |
| Msa0077130 | Msa0125090 | 0.829580 | 4.753009e-55 | -8.615850e-47 |
| Msa0077140 | Msa0125090 | 0.900950 | 4.384246e-78 | -8.615850e-47 |
| Msa0095560 | Msa0125090 | 0.812306 | 4.530289e-51 | -8.615850e-47 |
| Msa0101810 | Msa0125090 | -0.821301 | 4.341491e-53 | -8.615850e-47 |
| Msa0112750 | Msa0125090 | 0.836960 | 6.888258e-57 | -8.615850e-47 |
| Msa0120040 | Msa0125090 | -0.803471 | 3.431265e-49 | -8.615850e-47 |
| Msa0122590 | Msa0125090 | 0.800666 | 1.295180e-48 | -8.615850e-47 |
| Msa0123300 | Msa0125090 | 0.822216 | 2.667540e-53 | -8.615850e-47 |
| Msa0125090 | Msa0125100 | 0.909730 | 4.121473e-82 | -8.615850e-47 |
| Msa0125090 | Msa0140780 | 0.821362 | 4.204540e-53 | -8.615850e-47 |
| Msa0125090 | Msa0141620 | 0.802820 | 4.679158e-49 | -8.615850e-47 |
| Msa0125090 | Msa0142200 | 0.839038 | 2.012197e-57 | -8.615850e-47 |
| Msa0125090 | Msa0143560 | 0.806752 | 7.060232e-50 | -8.615850e-47 |
| Msa0125090 | Msa0144790 | 0.808818 | 2.569239e-50 | -8.615850e-47 |
| Msa0125090 | Msa0146260 | 0.819799 | 9.609186e-53 | -8.615850e-47 |
| Msa0125090 | Msa0152430 | 0.807362 | 5.245786e-50 | -8.615850e-47 |
| Msa0125090 | Msa0157290 | 0.847108 | 1.424076e-59 | -8.615850e-47 |
| Msa0125090 | Msa0159930 | 0.820187 | 7.828979e-53 | -8.615850e-47 |
| Msa0125090 | Msa0166870 | 0.809571 | 1.772073e-50 | -8.615850e-47 |
| Msa0125090 | Msa0169860 | 0.914871 | 1.151658e-84 | -8.615850e-47 |
| Msa0125090 | Msa0169870 | 0.904737 | 8.974058e-80 | -8.615850e-47 |
| Msa0125090 | Msa0169920 | 0.844396 | 7.758300e-59 | -8.615850e-47 |
| Msa0125090 | Msa0170090 | 0.833540 | 5.029847e-56 | -8.615850e-47 |
| Msa0125090 | Msa0188830 | 0.814189 | 1.748512e-51 | -8.615850e-47 |
| Msa0125090 | Msa0191250 | 0.833903 | 4.081723e-56 | -8.615850e-47 |
| Msa0125090 | Msa0197660 | 0.812111 | 4.995798e-51 | -8.615850e-47 |
| Msa0125090 | Msa0200260 | 0.826486 | 2.642932e-54 | -8.615850e-47 |
| Msa0125090 | Msa0212990 | 0.818131 | 2.299867e-52 | -8.615850e-47 |
| Msa0125090 | Msa0213040 | 0.829196 | 5.892084e-55 | -8.615850e-47 |
| Msa0125090 | Msa0213520 | 0.821053 | 4.953417e-53 | -8.615850e-47 |
| Msa0125090 | Msa0215320 | -0.806606 | 7.580220e-50 | -8.615850e-47 |
| Msa0125090 | Msa0220580 | 0.821742 | 3.433729e-53 | -8.615850e-47 |
| Msa0125090 | Msa0221060 | 0.805393 | 1.364126e-49 | -8.615850e-47 |
| Msa0125090 | Msa0221290 | 0.808611 | 2.844880e-50 | -8.615850e-47 |
| Msa0125090 | Msa0227470 | 0.837514 | 4.968933e-57 | -8.615850e-47 |
| Msa0125090 | Msa0237310 | 0.824865 | 6.404022e-54 | -8.615850e-47 |
| Msa0125090 | Msa0239480 | 0.836291 | 1.019633e-56 | -8.615850e-47 |
| Msa0125090 | Msa0239800 | 0.805212 | 1.488719e-49 | -8.615850e-47 |
| Msa0125090 | Msa0243100 | 0.839641 | 1.403386e-57 | -8.615850e-47 |
| Msa0125090 | Msa0243710 | 0.816852 | 4.465608e-52 | -8.615850e-47 |
| Msa0125090 | Msa0244860 | 0.805472 | 1.313045e-49 | -8.615850e-47 |
| Msa0125090 | Msa0245940 | 0.816519 | 5.305017e-52 | -8.615850e-47 |
| Msa0125090 | Msa0253340 | 0.830833 | 2.349774e-55 | -8.615850e-47 |
| Msa0125090 | Msa0259500 | 0.807873 | 4.086471e-50 | -8.615850e-47 |
| Msa0125090 | Msa0261340 | 0.825419 | 4.736721e-54 | -8.615850e-47 |
| Msa0125090 | Msa0270100 | 0.805724 | 1.162502e-49 | -8.615850e-47 |
| Msa0125090 | Msa0272730 | 0.807668 | 4.516965e-50 | -8.615850e-47 |
| Msa0125090 | Msa0274730 | 0.825471 | 4.603405e-54 | -8.615850e-47 |
| Msa0125090 | Msa0283450 | 0.810522 | 1.105548e-50 | -8.615850e-47 |
| Msa0125090 | Msa0283520 | 0.805337 | 1.401371e-49 | -8.615850e-47 |
| Msa0125090 | Msa0284410 | 0.803527 | 3.340242e-49 | -8.615850e-47 |
| Msa0125090 | Msa0284420 | 0.803367 | 3.606551e-49 | -8.615850e-47 |
| Msa0125090 | Msa0284520 | 0.802779 | 4.770847e-49 | -8.615850e-47 |
| Msa0125090 | Msa0287650 | 0.847614 | 1.034343e-59 | -8.615850e-47 |
| Msa0125090 | Msa0292170 | 0.810889 | 9.209446e-51 | -8.615850e-47 |
| Msa0125090 | Msa0292930 | 0.815300 | 9.919310e-52 | -8.615850e-47 |
| Msa0125090 | Msa0305700 | 0.824201 | 9.176263e-54 | -8.615850e-47 |
| Msa0125090 | Msa0306210 | -0.808409 | 3.141204e-50 | -8.615850e-47 |
| Msa0125090 | Msa0311860 | 0.808628 | 2.820357e-50 | -8.615850e-47 |
| Msa0125090 | Msa0315530 | 0.828167 | 1.045261e-54 | -8.615850e-47 |
| Msa0125090 | Msa0317510 | 0.820267 | 7.505752e-53 | -8.615850e-47 |
| Msa0125090 | Msa0322690 | 0.820444 | 6.837141e-53 | -8.615850e-47 |
| Msa0125090 | Msa0326520 | 0.808982 | 2.369691e-50 | -8.615850e-47 |
| Msa0125090 | Msa0330340 | 0.807420 | 5.099789e-50 | -8.615850e-47 |
| Msa0125090 | Msa0332000 | 0.817647 | 2.958773e-52 | -8.615850e-47 |
| Msa0125090 | Msa0333920 | 0.800809 | 1.210896e-48 | -8.615850e-47 |
| Msa0125090 | Msa0334040 | 0.812463 | 4.185873e-51 | -8.615850e-47 |
| Msa0125090 | Msa0338110 | 0.814642 | 1.388804e-51 | -8.615850e-47 |
| Msa0125090 | Msa0340450 | 0.827483 | 1.525973e-54 | -8.615850e-47 |
| Msa0125090 | Msa0341540 | 0.802711 | 4.927272e-49 | -8.615850e-47 |
| Msa0125090 | Msa0344690 | -0.804084 | 2.559507e-49 | -8.615850e-47 |
| Msa0125090 | Msa0351380 | 0.803727 | 3.036225e-49 | -8.615850e-47 |
| Msa0125090 | Msa0357340 | 0.806593 | 7.629266e-50 | -8.615850e-47 |
| Msa0125090 | Msa0369850 | 0.801062 | 1.075131e-48 | -8.615850e-47 |
| Msa0125090 | Msa0376350 | 0.800028 | 1.746244e-48 | -8.615850e-47 |
| Msa0125090 | Msa0388960 | 0.827122 | 1.862865e-54 | -8.615850e-47 |
| Msa0125090 | Msa0389340 | 0.824738 | 6.858948e-54 | -8.615850e-47 |
| Msa0125090 | Msa0395790 | 0.829273 | 5.645037e-55 | -8.615850e-47 |
| Msa0125090 | Msa0399300 | 0.814959 | 1.181108e-51 | -8.615850e-47 |
| Msa0125090 | Msa0407900 | 0.808264 | 3.373425e-50 | -8.615850e-47 |
| Msa0125090 | Msa0407910 | 0.805310 | 1.419595e-49 | -8.615850e-47 |
| Msa0125090 | Msa0407920 | 0.822130 | 2.792204e-53 | -8.615850e-47 |
| Msa0125090 | Msa0410650 | 0.823231 | 1.548173e-53 | -8.615850e-47 |
| Msa0125090 | Msa0426900 | 0.801518 | 8.670193e-49 | -8.615850e-47 |
| Msa0125090 | Msa0431060 | 0.813020 | 3.161742e-51 | -8.615850e-47 |
| Msa0125090 | Msa0439970 | 0.827014 | 1.976354e-54 | -8.615850e-47 |
| Msa0125090 | Msa0443260 | 0.811467 | 6.900570e-51 | -8.615850e-47 |
| Msa0125090 | Msa0452920 | 0.841514 | 4.537735e-58 | -8.615850e-47 |
| Msa0125090 | Msa0467430 | 0.803395 | 3.557651e-49 | -8.615850e-47 |
| Msa0125090 | Msa0479170 | 0.814233 | 1.709848e-51 | -8.615850e-47 |
| Msa0125090 | Msa0483650 | 0.829634 | 4.613492e-55 | -8.615850e-47 |
| Msa0125090 | Msa0484780 | 0.843782 | 1.133804e-58 | -8.615850e-47 |
| Msa0125090 | Msa0495320 | 0.802321 | 5.930009e-49 | -8.615850e-47 |
| Msa0125090 | Msa0507680 | 0.823539 | 1.311838e-53 | -8.615850e-47 |
| Msa0125090 | Msa0509610 | 0.811094 | 8.312767e-51 | -8.615850e-47 |
| Msa0125090 | Msa0512230 | 0.815774 | 7.780926e-52 | -8.615850e-47 |
| Msa0125090 | Msa0512890 | 0.802071 | 6.677147e-49 | -8.615850e-47 |
| Msa0125090 | Msa0512900 | 0.822337 | 2.500080e-53 | -8.615850e-47 |
| Msa0125090 | Msa0514030 | 0.804343 | 2.261043e-49 | -8.615850e-47 |
| Msa0125090 | Msa0523460 | 0.846159 | 2.587833e-59 | -8.615850e-47 |
| Msa0125090 | Msa0526940 | 0.803809 | 2.920126e-49 | -8.615850e-47 |
| Msa0125090 | Msa0532350 | 0.800360 | 1.494694e-48 | -8.615850e-47 |
| Msa0125090 | Msa0536220 | 0.835357 | 1.758945e-56 | -8.615850e-47 |
| Msa0125090 | Msa0545200 | 0.802947 | 4.404845e-49 | -8.615850e-47 |
| Msa0125090 | Msa0555020 | 0.817081 | 3.966558e-52 | -8.615850e-47 |
| Msa0125090 | Msa0558690 | 0.801422 | 9.073477e-49 | -8.615850e-47 |
| Msa0125090 | Msa0561230 | 0.809175 | 2.154759e-50 | -8.615850e-47 |
| Msa0125090 | Msa0571130 | 0.804093 | 2.548432e-49 | -8.615850e-47 |
| Msa0125090 | Msa0572420 | 0.816253 | 6.081591e-52 | -8.615850e-47 |
| Msa0125090 | Msa0572480 | 0.804100 | 2.540550e-49 | -8.615850e-47 |
| Msa0125090 | Msa0586910 | 0.805342 | 1.398267e-49 | -8.615850e-47 |
| Msa0125090 | Msa0599890 | 0.804798 | 1.816824e-49 | -8.615850e-47 |
| Msa0125090 | Msa0602250 | 0.803700 | 3.075470e-49 | -8.615850e-47 |
| Msa0125090 | Msa0608620 | 0.821776 | 3.372772e-53 | -8.615850e-47 |
| Msa0125090 | Msa0613090 | 0.814832 | 1.260255e-51 | -8.615850e-47 |
| Msa0125090 | Msa0626410 | 0.812347 | 4.436997e-51 | -8.615850e-47 |
| Msa0125090 | Msa0629430 | 0.812200 | 4.778290e-51 | -8.615850e-47 |
| Msa0125090 | Msa0629450 | 0.814822 | 1.266975e-51 | -8.615850e-47 |
| Msa0125090 | Msa0641360 | 0.821187 | 4.612424e-53 | -8.615850e-47 |
| Msa0125090 | Msa0648880 | 0.818715 | 1.696425e-52 | -8.615850e-47 |
| Msa0125090 | Msa0657610 | 0.821687 | 3.536940e-53 | -8.615850e-47 |
| Msa0125090 | Msa0657970 | 0.835642 | 1.489927e-56 | -8.615850e-47 |
| Msa0125090 | Msa0658570 | 0.810898 | 9.169182e-51 | -8.615850e-47 |
| Msa0125090 | Msa0664850 | 0.828502 | 8.676390e-55 | -8.615850e-47 |
| Msa0125090 | Msa0667050 | 0.830030 | 3.693432e-55 | -8.615850e-47 |
| Msa0125090 | Msa0669440 | 0.814600 | 1.418527e-51 | -8.615850e-47 |
| Msa0125090 | Msa0673460 | 0.803196 | 3.913247e-49 | -8.615850e-47 |
| Msa0125090 | Msa0676760 | 0.809957 | 1.463392e-50 | -8.615850e-47 |
| Msa0125090 | Msa0679830 | 0.800552 | 1.365951e-48 | -8.615850e-47 |
| Msa0125090 | Msa0682550 | 0.822562 | 2.216160e-53 | -8.615850e-47 |
| Msa0125090 | Msa0683510 | 0.816332 | 5.839634e-52 | -8.615850e-47 |
| Msa0125090 | Msa0685750 | 0.815842 | 7.515348e-52 | -8.615850e-47 |
| Msa0125090 | Msa0688070 | 0.815670 | 8.207428e-52 | -8.615850e-47 |
| Msa0125090 | Msa0693380 | 0.821649 | 3.608259e-53 | -8.615850e-47 |
| Msa0125090 | Msa0696640 | 0.801689 | 7.996067e-49 | -8.615850e-47 |
| Msa0125090 | Msa0702350 | 0.824162 | 9.370424e-54 | -8.615850e-47 |
| Msa0125090 | Msa0702570 | 0.810526 | 1.103067e-50 | -8.615850e-47 |
| Msa0125090 | Msa0702680 | 0.824875 | 6.368129e-54 | -8.615850e-47 |
| Msa0125090 | Msa0711790 | 0.801981 | 6.966090e-49 | -8.615850e-47 |
| Msa0125090 | Msa0722780 | 0.807019 | 6.200090e-50 | -8.615850e-47 |
| Msa0125090 | Msa0722850 | 0.824348 | 8.475862e-54 | -8.615850e-47 |
| Msa0125090 | Msa0723000 | 0.811578 | 6.528723e-51 | -8.615850e-47 |
| Msa0125090 | Msa0723050 | 0.801099 | 1.056409e-48 | -8.615850e-47 |
| Msa0125090 | Msa0723990 | 0.807804 | 4.226597e-50 | -8.615850e-47 |
| Msa0125090 | Msa0725760 | 0.800183 | 1.623946e-48 | -8.615850e-47 |
| Msa0125090 | Msa0727710 | 0.801311 | 9.561465e-49 | -8.615850e-47 |
| Msa0125090 | Msa0739730 | 0.804040 | 2.613980e-49 | -8.615850e-47 |
| Msa0125090 | Msa0744170 | -0.803968 | 2.706210e-49 | -8.615850e-47 |
| Msa0125090 | Msa0756630 | -0.803792 | 2.943793e-49 | -8.615850e-47 |
| Msa0125090 | Msa0760130 | 0.818883 | 1.553769e-52 | -8.615850e-47 |
| Msa0125090 | Msa0767300 | 0.807149 | 5.818850e-50 | -8.615850e-47 |
| Msa0125090 | Msa0788710 | 0.803084 | 4.125941e-49 | -8.615850e-47 |
| Msa0125090 | Msa0810220 | 0.803574 | 3.267398e-49 | -8.615850e-47 |
| Msa0125090 | Msa0816710 | 0.814638 | 1.391542e-51 | -8.615850e-47 |
| Msa0125090 | Msa0822870 | 0.800983 | 1.115496e-48 | -8.615850e-47 |
| Msa0125090 | Msa0824660 | 0.804737 | 1.871565e-49 | -8.615850e-47 |
| Msa0125090 | Msa0828560 | 0.806668 | 7.354837e-50 | -8.615850e-47 |
| Msa0125090 | Msa0829620 | 0.825077 | 5.705838e-54 | -8.615850e-47 |
| Msa0125090 | Msa0843220 | 0.808950 | 2.407268e-50 | -8.615850e-47 |
| Msa0125090 | Msa0843400 | 0.808197 | 3.486723e-50 | -8.615850e-47 |
| Msa0125090 | Msa0867890 | 0.842511 | 2.472362e-58 | -8.615850e-47 |
| Msa0125090 | Msa0868020 | 0.818568 | 1.831604e-52 | -8.615850e-47 |
| Msa0125090 | Msa0870530 | 0.804460 | 2.137411e-49 | -8.615850e-47 |
| Msa0125090 | Msa0880140 | 0.844736 | 6.283218e-59 | -8.615850e-47 |
| Msa0125090 | Msa0883060 | 0.812802 | 3.530145e-51 | -8.615850e-47 |
| Msa0125090 | Msa0896750 | 0.822651 | 2.113937e-53 | -8.615850e-47 |
| Msa0125090 | Msa0903690 | 0.807119 | 5.905728e-50 | -8.615850e-47 |
| Msa0125090 | Msa0907070 | 0.800429 | 1.447139e-48 | -8.615850e-47 |
| Msa0125090 | Msa0908050 | 0.832319 | 1.011848e-55 | -8.615850e-47 |
| Msa0125090 | Msa0909120 | 0.829984 | 3.791542e-55 | -8.615850e-47 |
| Msa0125090 | Msa0909140 | 0.835549 | 1.573011e-56 | -8.615850e-47 |
| Msa0125090 | Msa0910430 | 0.815110 | 1.093597e-51 | -8.615850e-47 |
| Msa0125090 | Msa0923330 | 0.800767 | 1.234801e-48 | -8.615850e-47 |
| Msa0125090 | Msa0932730 | 0.804173 | 2.453053e-49 | -8.615850e-47 |
| Msa0125090 | Msa0933230 | 0.834122 | 3.596326e-56 | -8.615850e-47 |
| Msa0125090 | Msa0933310 | 0.812099 | 5.026623e-51 | -8.615850e-47 |
| Msa0125090 | Msa0948290 | 0.808903 | 2.463450e-50 | -8.615850e-47 |
| Msa0125090 | Msa0954550 | 0.805216 | 1.485869e-49 | -8.615850e-47 |
| Msa0125090 | Msa0964840 | 0.821300 | 4.345830e-53 | -8.615850e-47 |
| Msa0125090 | Msa0967380 | 0.800172 | 1.632204e-48 | -8.615850e-47 |
| Msa0125090 | Msa0969450 | 0.828102 | 1.083581e-54 | -8.615850e-47 |
| Msa0125090 | Msa0969520 | 0.826510 | 2.607782e-54 | -8.615850e-47 |
| Msa0125090 | Msa0971090 | 0.828865 | 7.088584e-55 | -8.615850e-47 |
| Msa0125090 | Msa0989220 | 0.810523 | 1.104682e-50 | -8.615850e-47 |
| Msa0125090 | Msa0990350 | 0.810776 | 9.740162e-51 | -8.615850e-47 |
| Msa0125090 | Msa1044420 | 0.807641 | 4.576471e-50 | -8.615850e-47 |
| Msa0125090 | Msa1065610 | 0.801002 | 1.105661e-48 | -8.615850e-47 |
| Msa0125090 | Msa1068200 | -0.800472 | 1.418502e-48 | -8.615850e-47 |
| Msa0125090 | Msa1075220 | -0.816588 | 5.117317e-52 | -8.615850e-47 |
| Msa0125090 | Msa1079590 | 0.808317 | 3.285889e-50 | -8.615850e-47 |
| Msa0125090 | Msa1080160 | 0.811142 | 8.116560e-51 | -8.615850e-47 |
| Msa0125090 | Msa1082500 | 0.856488 | 3.110471e-62 | -8.615850e-47 |
| Msa0125090 | Msa1085200 | 0.817354 | 3.444240e-52 | -8.615850e-47 |
| Msa0125090 | Msa1087980 | 0.803046 | 4.202937e-49 | -8.615850e-47 |
| Msa0125090 | Msa1098400 | 0.801527 | 8.631671e-49 | -8.615850e-47 |
| Msa0125090 | Msa1098560 | 0.803550 | 3.304982e-49 | -8.615850e-47 |
| Msa0125090 | Msa1102770 | 0.821760 | 3.401169e-53 | -8.615850e-47 |
| Msa0125090 | Msa1116130 | -0.808298 | 3.317541e-50 | -8.615850e-47 |
| Msa0125090 | Msa1127770 | 0.809185 | 2.143701e-50 | -8.615850e-47 |
| Msa0125090 | Msa1130270 | -0.813941 | 1.983623e-51 | -8.615850e-47 |
| Msa0125090 | Msa1145250 | -0.803156 | 3.988486e-49 | -8.615850e-47 |
| Msa0125090 | Msa1151910 | 0.808043 | 3.759185e-50 | -8.615850e-47 |
| Msa0125090 | Msa1162550 | -0.825290 | 5.080837e-54 | -8.615850e-47 |
| Msa0125090 | Msa1172670 | 0.809010 | 2.337458e-50 | -8.615850e-47 |
| Msa0125090 | Msa1179280 | 0.803692 | 3.087963e-49 | -8.615850e-47 |
| Msa0125090 | Msa1193290 | 0.805205 | 1.493553e-49 | -8.615850e-47 |
| Msa0125090 | Msa1212940 | 0.817834 | 2.684867e-52 | -8.615850e-47 |
| Msa0125090 | Msa1214880 | 0.825000 | 5.948429e-54 | -8.615850e-47 |
| Msa0125090 | Msa1214890 | 0.833048 | 6.671047e-56 | -8.615850e-47 |
| Msa0125090 | Msa1224480 | 0.817327 | 3.493065e-52 | -8.615850e-47 |
| Msa0125090 | Msa1224830 | 0.811397 | 7.146438e-51 | -8.615850e-47 |
| Msa0125090 | Msa1228210 | 0.802000 | 6.902847e-49 | -8.615850e-47 |
| Msa0125090 | Msa1238930 | 0.800195 | 1.615334e-48 | -8.615850e-47 |
| Msa0125090 | Msa1242220 | 0.847800 | 9.193241e-60 | -8.615850e-47 |
| Msa0125090 | Msa1267610 | 0.803377 | 3.589379e-49 | -8.615850e-47 |
| Msa0125090 | Msa1267900 | 0.807420 | 5.099019e-50 | -8.615850e-47 |
| Msa0125090 | Msa1271300 | 0.808138 | 3.589177e-50 | -8.615850e-47 |
| Msa0125090 | Msa1278840 | 0.828236 | 1.005525e-54 | -8.615850e-47 |
| Msa0125090 | Msa1283860 | 0.841844 | 3.713904e-58 | -8.615850e-47 |
| Msa0125090 | Msa1287440 | 0.840512 | 8.317785e-58 | -8.615850e-47 |
| Msa0125090 | Msa1297290 | 0.826339 | 2.864091e-54 | -8.615850e-47 |
| Msa0125090 | Msa1300490 | 0.800857 | 1.183624e-48 | -8.615850e-47 |
| Msa0125090 | Msa1306850 | 0.808779 | 2.619326e-50 | -8.615850e-47 |
| Msa0125090 | Msa1308380 | 0.817569 | 3.080322e-52 | -8.615850e-47 |
| Msa0125090 | Msa1313150 | 0.821626 | 3.654014e-53 | -8.615850e-47 |
| Msa0125090 | Msa1314340 | 0.811660 | 6.264936e-51 | -8.615850e-47 |
| Msa0125090 | Msa1320740 | 0.803078 | 4.138667e-49 | -8.615850e-47 |
| Msa0125090 | Msa1322860 | 0.804312 | 2.294430e-49 | -8.615850e-47 |
| Msa0125090 | Msa1322890 | 0.850396 | 1.745324e-60 | -8.615850e-47 |
| Msa0125090 | Msa1324500 | 0.817624 | 2.993935e-52 | -8.615850e-47 |
| Msa0125090 | Msa1324550 | 0.809404 | 1.923883e-50 | -8.615850e-47 |
| Msa0125090 | Msa1327050 | 0.805268 | 1.448775e-49 | -8.615850e-47 |
| Msa0125090 | Msa1331910 | 0.817727 | 2.838902e-52 | -8.615850e-47 |
| Msa0125090 | Msa1341570 | 0.813740 | 2.195995e-51 | -8.615850e-47 |
| Msa0125090 | Msa1348880 | 0.801555 | 8.520321e-49 | -8.615850e-47 |
| Msa0125090 | Msa1353980 | 0.804695 | 1.909620e-49 | -8.615850e-47 |
| Msa0125090 | Msa1372760 | 0.808460 | 3.064320e-50 | -8.615850e-47 |
| Msa0125090 | Msa1374040 | 0.818294 | 2.112640e-52 | -8.615850e-47 |
| Msa0125090 | Msa1376890 | 0.803921 | 2.767190e-49 | -8.615850e-47 |
| Msa0125090 | Msa1384350 | 0.817863 | 2.643901e-52 | -8.615850e-47 |
| Msa0125090 | Msa1385000 | 0.828364 | 9.365129e-55 | -8.615850e-47 |
| Msa0125090 | Msa1392260 | 0.836740 | 7.837443e-57 | -8.615850e-47 |
| Msa0125090 | Msa1393040 | 0.813473 | 2.515008e-51 | -8.615850e-47 |
| Msa0125090 | Msa1408620 | -0.812825 | 3.489164e-51 | -8.615850e-47 |
| Msa0125090 | Msa1409870 | 0.807835 | 4.162207e-50 | -8.615850e-47 |
| Msa0125090 | Msa1410210 | 0.816640 | 4.983607e-52 | -8.615850e-47 |
| Msa0125090 | Msa1415910 | 0.801390 | 9.209546e-49 | -8.615850e-47 |
| Msa0125090 | Msa1420140 | 0.802718 | 4.912565e-49 | -8.615850e-47 |
| Msa0125090 | Msa1423880 | 0.834144 | 3.550991e-56 | -8.615850e-47 |
| Msa0125090 | Msa1429900 | 0.814569 | 1.440824e-51 | -8.615850e-47 |
| Msa0125090 | Msa1438250 | 0.817877 | 2.625117e-52 | -8.615850e-47 |
| Msa0125090 | Msa1445030 | 0.813892 | 2.033731e-51 | -8.615850e-47 |
| Msa0125090 | Msa1452120 | 0.819003 | 1.459218e-52 | -8.615850e-47 |
| Msa0125090 | Msa1455460 | 0.802676 | 5.010346e-49 | -8.615850e-47 |
| Msa0125090 | Msa1457430 | 0.813592 | 2.367130e-51 | -8.615850e-47 |
| Msa0125090 | Msa1460050 | 0.805879 | 1.078416e-49 | -8.615850e-47 |
| Msa0125090 | Msa1460240 | 0.802417 | 5.667272e-49 | -8.615850e-47 |
| Msa0125090 | Msa1464160 | 0.859036 | 5.460589e-63 | -8.615850e-47 |
| Msa0125090 | Msa1466540 | 0.832427 | 9.510889e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125090 | MtrunA17_Chr1g0186841 | 93.913 | 345 | 6 | 2 | 1 | 330 | 327 | 671 | 0.0 | 661 |
| Msa0125090 | MtrunA17_Chr1g0186851 | 56.047 | 339 | 135 | 3 | 6 | 330 | 331 | 669 | 3.17e-136 | 402 |
| Msa0125090 | MtrunA17_Chr1g0187041 | 53.392 | 339 | 141 | 5 | 1 | 323 | 327 | 664 | 1.79e-125 | 374 |
| Msa0125090 | MtrunA17_Chr1g0186911 | 53.776 | 331 | 139 | 3 | 6 | 322 | 231 | 561 | 6.84e-124 | 367 |
| Msa0125090 | MtrunA17_Chr1g0186861 | 53.776 | 331 | 139 | 3 | 6 | 322 | 333 | 663 | 1.15e-123 | 369 |
| Msa0125090 | MtrunA17_Chr1g0165791 | 36.338 | 355 | 195 | 9 | 6 | 329 | 331 | 685 | 4.11e-67 | 223 |
| Msa0125090 | MtrunA17_Chr7g0226571 | 32.345 | 371 | 193 | 9 | 6 | 322 | 345 | 711 | 1.64e-62 | 211 |
| Msa0125090 | MtrunA17_Chr1g0186981 | 36.286 | 350 | 189 | 11 | 6 | 321 | 313 | 662 | 3.41e-59 | 201 |
| Msa0125090 | MtrunA17_Chr8g0381301 | 32.345 | 371 | 189 | 13 | 6 | 321 | 340 | 703 | 3.34e-53 | 186 |
| Msa0125090 | MtrunA17_Chr1g0186991 | 33.428 | 353 | 194 | 12 | 6 | 321 | 318 | 666 | 4.23e-53 | 185 |
| Msa0125090 | MtrunA17_Chr1g0187001 | 33.242 | 364 | 195 | 12 | 6 | 330 | 290 | 644 | 2.92e-52 | 182 |
| Msa0125090 | MtrunA17_Chr3g0116601 | 31.044 | 364 | 197 | 11 | 6 | 320 | 346 | 704 | 3.24e-50 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0125090 | AT3G01680.1 | 31.771 | 384 | 190 | 13 | 6 | 323 | 353 | 730 | 4.22e-54 | 189 |
| Msa0125090 | AT3G01670.2 | 28.457 | 376 | 206 | 11 | 1 | 320 | 476 | 844 | 3.08e-38 | 145 |
| Msa0125090 | AT3G01670.1 | 28.457 | 376 | 206 | 11 | 1 | 320 | 452 | 820 | 3.85e-38 | 144 |
| Msa0125090 | AT1G67790.1 | 22.884 | 319 | 198 | 12 | 38 | 318 | 356 | 664 | 1.91e-20 | 92.8 |
Find 51 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACCTCGTAAGTCGATTT+TGG | 0.196977 | 1_3:-53279002 | Msa0125090:CDS |
| TTCCATTTGATCATGTCTTA+TGG | 0.236485 | 1_3:-53279755 | Msa0125090:CDS |
| CAATGCAATTGCAAAACATT+AGG | 0.286822 | 1_3:-53278599 | None:intergenic |
| CTTGAAATTCCTATTGTTGC+TGG | 0.287322 | 1_3:-53278706 | Msa0125090:CDS |
| ATGAACAATACAAGATTGTT+TGG | 0.318857 | 1_3:-53279973 | Msa0125090:CDS |
| AATGCAATTGCAAAACATTA+GGG | 0.325441 | 1_3:-53278598 | None:intergenic |
| ATTTCATCATCCATTGTAAA+GGG | 0.342752 | 1_3:+53279719 | None:intergenic |
| ATGAGTGACACGAGCAAAAC+TGG | 0.375360 | 1_3:+53278741 | None:intergenic |
| ATGAAAATCTCCATGGTACT+AGG | 0.402817 | 1_3:+53278649 | None:intergenic |
| TCAAGTTCATTAATGAAGAA+TGG | 0.407316 | 1_3:-53279844 | Msa0125090:CDS |
| GATCATGTCTTATGGAATCA+AGG | 0.415650 | 1_3:-53279747 | Msa0125090:CDS |
| CTGTGGCTGAATTTGAGAAA+TGG | 0.418335 | 1_3:-53278816 | Msa0125090:CDS |
| GAATTCAAAAGGACAGGAAC+TGG | 0.425070 | 1_3:-53279694 | Msa0125090:CDS |
| GGTAACTTTCCAGCAACAAT+AGG | 0.436825 | 1_3:+53278697 | None:intergenic |
| CAGCAACAATAGGAATTTCA+AGG | 0.438861 | 1_3:+53278707 | None:intergenic |
| TATTTCATCATCCATTGTAA+AGG | 0.440057 | 1_3:+53279718 | None:intergenic |
| CAAGTTCATTAATGAAGAAT+GGG | 0.444482 | 1_3:-53279843 | Msa0125090:CDS |
| GGATTCCAATCGTCGAAGAA+TGG | 0.446974 | 1_3:-53279952 | Msa0125090:CDS |
| TTCCATAAGACATGATCAAA+TGG | 0.476560 | 1_3:+53279753 | None:intergenic |
| AAAGATGTTGTTATCAAGAA+GGG | 0.481066 | 1_3:-53278793 | Msa0125090:CDS |
| TCCATGGTACTAGGACAATC+AGG | 0.486441 | 1_3:+53278658 | None:intergenic |
| TCGTTCCATTCTTCGACGAT+TGG | 0.491649 | 1_3:+53279947 | None:intergenic |
| GTTGGATCCATTCTTTGTCA+TGG | 0.491940 | 1_3:+53279115 | None:intergenic |
| TTGCATACTTAGTGAACTGT+TGG | 0.493419 | 1_3:+53279097 | None:intergenic |
| TGATGAAATAAGAATTCAAA+AGG | 0.499915 | 1_3:-53279705 | Msa0125090:CDS |
| GAAAGATGTTGTTATCAAGA+AGG | 0.504611 | 1_3:-53278794 | Msa0125090:CDS |
| ACGGCGGCCATGACAAAGAA+TGG | 0.505835 | 1_3:-53279122 | Msa0125090:CDS |
| CAGAATGTCGAAAACATAGC+TGG | 0.516066 | 1_3:-53279869 | Msa0125090:CDS |
| CAAGGCTTTCCCCTTTACAA+TGG | 0.529512 | 1_3:-53279729 | Msa0125090:CDS |
| TCTGTTGTGTTGAGTGGTCA+TGG | 0.529738 | 1_3:-53278856 | Msa0125090:CDS |
| AAATAAGAATTCAAAAGGAC+AGG | 0.531992 | 1_3:-53279700 | Msa0125090:CDS |
| TTTGTGGTGTTTAGTCCTCA+AGG | 0.535506 | 1_3:-53279800 | Msa0125090:CDS |
| TTGTGTTGCACCTTTCCTTG+AGG | 0.539203 | 1_3:+53279785 | None:intergenic |
| GTCAACATAAAAGAGTTCAA+TGG | 0.542195 | 1_3:+53279035 | None:intergenic |
| TGTTTCTACTCTAGATGTCA+CGG | 0.542607 | 1_3:-53280044 | Msa0125090:CDS |
| GAAAATGTGCTTGTTCTGCT+CGG | 0.546825 | 1_3:+53279149 | None:intergenic |
| TCCTGATTGTCCTAGTACCA+TGG | 0.550611 | 1_3:-53278659 | Msa0125090:CDS |
| CAATTGCATTGGTCTTATTG+TGG | 0.554322 | 1_3:+53278611 | None:intergenic |
| CAACAGATGGTCCTTTGCTA+AGG | 0.567238 | 1_3:+53278872 | None:intergenic |
| AACTTCTTGTGTCACTACAT+CGG | 0.569484 | 1_3:+53278936 | None:intergenic |
| ATAGCTAATGAAAATCTCCA+TGG | 0.586541 | 1_3:+53278642 | None:intergenic |
| TGACCACTCAACACAACAGA+TGG | 0.592856 | 1_3:+53278859 | None:intergenic |
| TTTCATCATCCATTGTAAAG+GGG | 0.599778 | 1_3:+53279720 | None:intergenic |
| CGCTCCAAAATCGACTTACG+AGG | 0.601393 | 1_3:+53278998 | None:intergenic |
| GGTGTTTAGTCCTCAAGGAA+AGG | 0.602732 | 1_3:-53279795 | Msa0125090:CDS |
| GAGTAAGATGCCATGGTATG+TGG | 0.608793 | 1_3:-53279894 | Msa0125090:CDS |
| ACATTCTGCACCACATACCA+TGG | 0.636446 | 1_3:+53279884 | None:intergenic |
| GGTTGGGCTCTCCTTAGCAA+AGG | 0.640640 | 1_3:-53278883 | Msa0125090:CDS |
| GGACCATCTGTTGTGTTGAG+TGG | 0.654679 | 1_3:-53278862 | Msa0125090:CDS |
| TACAACAATTCTCAAAACTG+TGG | 0.669361 | 1_3:-53278833 | Msa0125090:CDS |
| TTCTACTCTAGATGTCACGG+AGG | 0.776640 | 1_3:-53280041 | Msa0125090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATGAAATAAGAATTCAAA+AGG | - | chr1_3:53278983-53279002 | Msa0125090:CDS | 20.0% |
| !! | TTTCATGAAATTTACATGTT+TGG | + | chr1_3:53279210-53279229 | None:intergenic | 20.0% |
| !!! | TTACAATCATATTGTGATTT+TGG | - | chr1_3:53279330-53279349 | Msa0125090:intron | 20.0% |
| !! | TGATGAAATAAGAATTCAAA+AGG | - | chr1_3:53278983-53279002 | Msa0125090:CDS | 20.0% |
| !! | TTTCATGAAATTTACATGTT+TGG | + | chr1_3:53279210-53279229 | None:intergenic | 20.0% |
| !!! | TTACAATCATATTGTGATTT+TGG | - | chr1_3:53279330-53279349 | Msa0125090:intron | 20.0% |
| ! | ATGAACAATACAAGATTGTT+TGG | - | chr1_3:53278715-53278734 | Msa0125090:CDS | 25.0% |
| !! | GCAAGAAATTCGATATTTTA+AGG | - | chr1_3:53278772-53278791 | Msa0125090:CDS | 25.0% |
| ! | TCAAGTTCATTAATGAAGAA+TGG | - | chr1_3:53278844-53278863 | Msa0125090:CDS | 25.0% |
| ! | CAAGTTCATTAATGAAGAAT+GGG | - | chr1_3:53278845-53278864 | Msa0125090:CDS | 25.0% |
| ! | ATTTCATCATCCATTGTAAA+GGG | + | chr1_3:53278972-53278991 | None:intergenic | 25.0% |
| ! | TATTTCATCATCCATTGTAA+AGG | + | chr1_3:53278973-53278992 | None:intergenic | 25.0% |
| ! | AAATAAGAATTCAAAAGGAC+AGG | - | chr1_3:53278988-53279007 | Msa0125090:CDS | 25.0% |
| ! | TTACAAAAATGAAACTGGTT+GGG | - | chr1_3:53279789-53279808 | Msa0125090:CDS | 25.0% |
| ! | AAAGATGTTGTTATCAAGAA+GGG | - | chr1_3:53279895-53279914 | Msa0125090:CDS | 25.0% |
| ! | ATGAACAATACAAGATTGTT+TGG | - | chr1_3:53278715-53278734 | Msa0125090:CDS | 25.0% |
| !! | GCAAGAAATTCGATATTTTA+AGG | - | chr1_3:53278772-53278791 | Msa0125090:CDS | 25.0% |
| ! | TCAAGTTCATTAATGAAGAA+TGG | - | chr1_3:53278844-53278863 | Msa0125090:CDS | 25.0% |
| ! | CAAGTTCATTAATGAAGAAT+GGG | - | chr1_3:53278845-53278864 | Msa0125090:CDS | 25.0% |
| ! | ATTTCATCATCCATTGTAAA+GGG | + | chr1_3:53278972-53278991 | None:intergenic | 25.0% |
| ! | TATTTCATCATCCATTGTAA+AGG | + | chr1_3:53278973-53278992 | None:intergenic | 25.0% |
| ! | AAATAAGAATTCAAAAGGAC+AGG | - | chr1_3:53278988-53279007 | Msa0125090:CDS | 25.0% |
| ! | TTACAAAAATGAAACTGGTT+GGG | - | chr1_3:53279789-53279808 | Msa0125090:CDS | 25.0% |
| ! | AAAGATGTTGTTATCAAGAA+GGG | - | chr1_3:53279895-53279914 | Msa0125090:CDS | 25.0% |
| CAAAAAGAAGTCTATGTTTG+TGG | - | chr1_3:53278872-53278891 | Msa0125090:CDS | 30.0% | |
| TTCCATTTGATCATGTCTTA+TGG | - | chr1_3:53278933-53278952 | Msa0125090:CDS | 30.0% | |
| TTCCATAAGACATGATCAAA+TGG | + | chr1_3:53278938-53278957 | None:intergenic | 30.0% | |
| TTTCATCATCCATTGTAAAG+GGG | + | chr1_3:53278971-53278990 | None:intergenic | 30.0% | |
| AACTGGATTGTATCTGTTAT+AGG | - | chr1_3:53279011-53279030 | Msa0125090:CDS | 30.0% | |
| CGAAAATTTACTTACCCATA+TGG | + | chr1_3:53279057-53279076 | None:intergenic | 30.0% | |
| ! | TGTAAAGACCGTTGAATTTT+GGG | - | chr1_3:53279116-53279135 | Msa0125090:CDS | 30.0% |
| CACAATATGATTGTAATGAC+TGG | + | chr1_3:53279326-53279345 | None:intergenic | 30.0% | |
| ! | AACAAGCACATTTTCTTCTA+CGG | - | chr1_3:53279547-53279566 | Msa0125090:intron | 30.0% |
| GTCAACATAAAAGAGTTCAA+TGG | + | chr1_3:53279656-53279675 | None:intergenic | 30.0% | |
| ! | TGAACTCTTTTATGTTGACA+AGG | - | chr1_3:53279657-53279676 | Msa0125090:intron | 30.0% |
| !! | ATCGGTTGTTTTGTGAATTT+TGG | + | chr1_3:53279737-53279756 | None:intergenic | 30.0% |
| CTGTCTTACAAAAATGAAAC+TGG | - | chr1_3:53279784-53279803 | Msa0125090:CDS | 30.0% | |
| CTTACAAAAATGAAACTGGT+TGG | - | chr1_3:53279788-53279807 | Msa0125090:CDS | 30.0% | |
| TACAACAATTCTCAAAACTG+TGG | - | chr1_3:53279855-53279874 | Msa0125090:CDS | 30.0% | |
| GAAAGATGTTGTTATCAAGA+AGG | - | chr1_3:53279894-53279913 | Msa0125090:CDS | 30.0% | |
| ATAGCTAATGAAAATCTCCA+TGG | + | chr1_3:53280049-53280068 | None:intergenic | 30.0% | |
| ! | CTAATGTTTTGCAATTGCAT+TGG | + | chr1_3:53280091-53280110 | None:intergenic | 30.0% |
| CAATGCAATTGCAAAACATT+AGG | - | chr1_3:53280089-53280108 | Msa0125090:CDS | 30.0% | |
| CAAAAAGAAGTCTATGTTTG+TGG | - | chr1_3:53278872-53278891 | Msa0125090:CDS | 30.0% | |
| TTCCATTTGATCATGTCTTA+TGG | - | chr1_3:53278933-53278952 | Msa0125090:CDS | 30.0% | |
| TTCCATAAGACATGATCAAA+TGG | + | chr1_3:53278938-53278957 | None:intergenic | 30.0% | |
| TTTCATCATCCATTGTAAAG+GGG | + | chr1_3:53278971-53278990 | None:intergenic | 30.0% | |
| AACTGGATTGTATCTGTTAT+AGG | - | chr1_3:53279011-53279030 | Msa0125090:CDS | 30.0% | |
| CGAAAATTTACTTACCCATA+TGG | + | chr1_3:53279057-53279076 | None:intergenic | 30.0% | |
| ! | TGTAAAGACCGTTGAATTTT+GGG | - | chr1_3:53279116-53279135 | Msa0125090:CDS | 30.0% |
| CACAATATGATTGTAATGAC+TGG | + | chr1_3:53279326-53279345 | None:intergenic | 30.0% | |
| ! | AACAAGCACATTTTCTTCTA+CGG | - | chr1_3:53279547-53279566 | Msa0125090:intron | 30.0% |
| GTCAACATAAAAGAGTTCAA+TGG | + | chr1_3:53279656-53279675 | None:intergenic | 30.0% | |
| ! | TGAACTCTTTTATGTTGACA+AGG | - | chr1_3:53279657-53279676 | Msa0125090:intron | 30.0% |
| !! | ATCGGTTGTTTTGTGAATTT+TGG | + | chr1_3:53279737-53279756 | None:intergenic | 30.0% |
| CTGTCTTACAAAAATGAAAC+TGG | - | chr1_3:53279784-53279803 | Msa0125090:CDS | 30.0% | |
| CTTACAAAAATGAAACTGGT+TGG | - | chr1_3:53279788-53279807 | Msa0125090:CDS | 30.0% | |
| TACAACAATTCTCAAAACTG+TGG | - | chr1_3:53279855-53279874 | Msa0125090:CDS | 30.0% | |
| GAAAGATGTTGTTATCAAGA+AGG | - | chr1_3:53279894-53279913 | Msa0125090:CDS | 30.0% | |
| ATAGCTAATGAAAATCTCCA+TGG | + | chr1_3:53280049-53280068 | None:intergenic | 30.0% | |
| ! | CTAATGTTTTGCAATTGCAT+TGG | + | chr1_3:53280091-53280110 | None:intergenic | 30.0% |
| ! | TGTTTCTACTCTAGATGTCA+CGG | - | chr1_3:53278644-53278663 | Msa0125090:CDS | 35.0% |
| !! | TTTTAAGGAGTAAGATGCCA+TGG | - | chr1_3:53278787-53278806 | Msa0125090:CDS | 35.0% |
| GATCATGTCTTATGGAATCA+AGG | - | chr1_3:53278941-53278960 | Msa0125090:CDS | 35.0% | |
| TTACCCATATGGAAATGTTG+CGG | + | chr1_3:53279046-53279065 | None:intergenic | 35.0% | |
| ! | GGGTAAGTAAATTTTCGACT+TGG | - | chr1_3:53279060-53279079 | Msa0125090:CDS | 35.0% |
| AACAACATACTTCACAACTG+TGG | + | chr1_3:53279091-53279110 | None:intergenic | 35.0% | |
| ! | GTGTAAAGACCGTTGAATTT+TGG | - | chr1_3:53279115-53279134 | Msa0125090:CDS | 35.0% |
| GCTTCTCTCTTTAAATCTCA+CGG | - | chr1_3:53279157-53279176 | Msa0125090:intron | 35.0% | |
| TTACAACTTCAGCAGATAGA+CGG | - | chr1_3:53279183-53279202 | Msa0125090:intron | 35.0% | |
| TTGCATACTTAGTGAACTGT+TGG | + | chr1_3:53279594-53279613 | None:intergenic | 35.0% | |
| !! | AAAACCTCGTAAGTCGATTT+TGG | - | chr1_3:53279686-53279705 | Msa0125090:intron | 35.0% |
| ! | AACTTCTTGTGTCACTACAT+CGG | + | chr1_3:53279755-53279774 | None:intergenic | 35.0% |
| CAGCAACAATAGGAATTTCA+AGG | + | chr1_3:53279984-53280003 | None:intergenic | 35.0% | |
| CTTGAAATTCCTATTGTTGC+TGG | - | chr1_3:53279982-53280001 | Msa0125090:CDS | 35.0% | |
| ! | TCAGGACATTTTATAGTCTC+AGG | + | chr1_3:53280015-53280034 | None:intergenic | 35.0% |
| ATGAAAATCTCCATGGTACT+AGG | + | chr1_3:53280042-53280061 | None:intergenic | 35.0% | |
| !! | CAATTGCATTGGTCTTATTG+TGG | + | chr1_3:53280080-53280099 | None:intergenic | 35.0% |
| ! | TGTTTCTACTCTAGATGTCA+CGG | - | chr1_3:53278644-53278663 | Msa0125090:CDS | 35.0% |
| !! | TTTTAAGGAGTAAGATGCCA+TGG | - | chr1_3:53278787-53278806 | Msa0125090:CDS | 35.0% |
| GATCATGTCTTATGGAATCA+AGG | - | chr1_3:53278941-53278960 | Msa0125090:CDS | 35.0% | |
| TTACCCATATGGAAATGTTG+CGG | + | chr1_3:53279046-53279065 | None:intergenic | 35.0% | |
| ! | GGGTAAGTAAATTTTCGACT+TGG | - | chr1_3:53279060-53279079 | Msa0125090:CDS | 35.0% |
| AACAACATACTTCACAACTG+TGG | + | chr1_3:53279091-53279110 | None:intergenic | 35.0% | |
| ! | GTGTAAAGACCGTTGAATTT+TGG | - | chr1_3:53279115-53279134 | Msa0125090:CDS | 35.0% |
| GCTTCTCTCTTTAAATCTCA+CGG | - | chr1_3:53279157-53279176 | Msa0125090:intron | 35.0% | |
| TTACAACTTCAGCAGATAGA+CGG | - | chr1_3:53279183-53279202 | Msa0125090:intron | 35.0% | |
| TTGCATACTTAGTGAACTGT+TGG | + | chr1_3:53279594-53279613 | None:intergenic | 35.0% | |
| !! | AAAACCTCGTAAGTCGATTT+TGG | - | chr1_3:53279686-53279705 | Msa0125090:intron | 35.0% |
| ! | AACTTCTTGTGTCACTACAT+CGG | + | chr1_3:53279755-53279774 | None:intergenic | 35.0% |
| CAGCAACAATAGGAATTTCA+AGG | + | chr1_3:53279984-53280003 | None:intergenic | 35.0% | |
| CTTGAAATTCCTATTGTTGC+TGG | - | chr1_3:53279982-53280001 | Msa0125090:CDS | 35.0% | |
| ! | TCAGGACATTTTATAGTCTC+AGG | + | chr1_3:53280015-53280034 | None:intergenic | 35.0% |
| ATGAAAATCTCCATGGTACT+AGG | + | chr1_3:53280042-53280061 | None:intergenic | 35.0% | |
| !! | CAATTGCATTGGTCTTATTG+TGG | + | chr1_3:53280080-53280099 | None:intergenic | 35.0% |
| CAGAATGTCGAAAACATAGC+TGG | - | chr1_3:53278819-53278838 | Msa0125090:CDS | 40.0% | |
| TTTGTGGTGTTTAGTCCTCA+AGG | - | chr1_3:53278888-53278907 | Msa0125090:CDS | 40.0% | |
| GAATTCAAAAGGACAGGAAC+TGG | - | chr1_3:53278994-53279013 | Msa0125090:CDS | 40.0% | |
| TTGACCGCAACATTTCCATA+TGG | - | chr1_3:53279039-53279058 | Msa0125090:CDS | 40.0% | |
| TGACCGCAACATTTCCATAT+GGG | - | chr1_3:53279040-53279059 | Msa0125090:CDS | 40.0% | |
| AACATACTTCACAACTGTGG+AGG | + | chr1_3:53279088-53279107 | None:intergenic | 40.0% | |
| GCTTCTCTCCCAAAATTCAA+CGG | + | chr1_3:53279127-53279146 | None:intergenic | 40.0% | |
| GTCTATCTGCTGAAGTTGTA+AGG | + | chr1_3:53279184-53279203 | None:intergenic | 40.0% | |
| GAAAATGTGCTTGTTCTGCT+CGG | + | chr1_3:53279542-53279561 | None:intergenic | 40.0% | |
| ! | AAGCACATTTTCTTCTACGG+CGG | - | chr1_3:53279550-53279569 | Msa0125090:intron | 40.0% |
| GTTGGATCCATTCTTTGTCA+TGG | + | chr1_3:53279576-53279595 | None:intergenic | 40.0% | |
| CTGTGGCTGAATTTGAGAAA+TGG | - | chr1_3:53279872-53279891 | Msa0125090:CDS | 40.0% | |
| GGTAACTTTCCAGCAACAAT+AGG | + | chr1_3:53279994-53280013 | None:intergenic | 40.0% | |
| CAGAATGTCGAAAACATAGC+TGG | - | chr1_3:53278819-53278838 | Msa0125090:CDS | 40.0% | |
| TTTGTGGTGTTTAGTCCTCA+AGG | - | chr1_3:53278888-53278907 | Msa0125090:CDS | 40.0% | |
| GAATTCAAAAGGACAGGAAC+TGG | - | chr1_3:53278994-53279013 | Msa0125090:CDS | 40.0% | |
| TTGACCGCAACATTTCCATA+TGG | - | chr1_3:53279039-53279058 | Msa0125090:CDS | 40.0% | |
| TGACCGCAACATTTCCATAT+GGG | - | chr1_3:53279040-53279059 | Msa0125090:CDS | 40.0% | |
| AACATACTTCACAACTGTGG+AGG | + | chr1_3:53279088-53279107 | None:intergenic | 40.0% | |
| GCTTCTCTCCCAAAATTCAA+CGG | + | chr1_3:53279127-53279146 | None:intergenic | 40.0% | |
| GTCTATCTGCTGAAGTTGTA+AGG | + | chr1_3:53279184-53279203 | None:intergenic | 40.0% | |
| GAAAATGTGCTTGTTCTGCT+CGG | + | chr1_3:53279542-53279561 | None:intergenic | 40.0% | |
| ! | AAGCACATTTTCTTCTACGG+CGG | - | chr1_3:53279550-53279569 | Msa0125090:intron | 40.0% |
| GTTGGATCCATTCTTTGTCA+TGG | + | chr1_3:53279576-53279595 | None:intergenic | 40.0% | |
| CTGTGGCTGAATTTGAGAAA+TGG | - | chr1_3:53279872-53279891 | Msa0125090:CDS | 40.0% | |
| GGTAACTTTCCAGCAACAAT+AGG | + | chr1_3:53279994-53280013 | None:intergenic | 40.0% | |
| TTCTACTCTAGATGTCACGG+AGG | - | chr1_3:53278647-53278666 | Msa0125090:CDS | 45.0% | |
| GGATTCCAATCGTCGAAGAA+TGG | - | chr1_3:53278736-53278755 | Msa0125090:CDS | 45.0% | |
| TCGTTCCATTCTTCGACGAT+TGG | + | chr1_3:53278744-53278763 | None:intergenic | 45.0% | |
| GAGTAAGATGCCATGGTATG+TGG | - | chr1_3:53278794-53278813 | Msa0125090:CDS | 45.0% | |
| ACATTCTGCACCACATACCA+TGG | + | chr1_3:53278807-53278826 | None:intergenic | 45.0% | |
| GGTGTTTAGTCCTCAAGGAA+AGG | - | chr1_3:53278893-53278912 | Msa0125090:CDS | 45.0% | |
| TTGTGTTGCACCTTTCCTTG+AGG | + | chr1_3:53278906-53278925 | None:intergenic | 45.0% | |
| CAAGGCTTTCCCCTTTACAA+TGG | - | chr1_3:53278959-53278978 | Msa0125090:CDS | 45.0% | |
| ! | TGGGAGAGAAGCGATTTTAG+TGG | - | chr1_3:53279135-53279154 | Msa0125090:CDS | 45.0% |
| TTCTGCTCGGTCTGCATTAT+AGG | + | chr1_3:53279529-53279548 | None:intergenic | 45.0% | |
| !! | CTCGTAAGTCGATTTTGGAG+CGG | - | chr1_3:53279691-53279710 | Msa0125090:CDS | 45.0% |
| CAACAGATGGTCCTTTGCTA+AGG | + | chr1_3:53279819-53279838 | None:intergenic | 45.0% | |
| TGACCACTCAACACAACAGA+TGG | + | chr1_3:53279832-53279851 | None:intergenic | 45.0% | |
| TCTGTTGTGTTGAGTGGTCA+TGG | - | chr1_3:53279832-53279851 | Msa0125090:CDS | 45.0% | |
| ATGAGTGACACGAGCAAAAC+TGG | + | chr1_3:53279950-53279969 | None:intergenic | 45.0% | |
| TCCTGATTGTCCTAGTACCA+TGG | - | chr1_3:53280029-53280048 | Msa0125090:CDS | 45.0% | |
| TCCATGGTACTAGGACAATC+AGG | + | chr1_3:53280033-53280052 | None:intergenic | 45.0% | |
| TTCTACTCTAGATGTCACGG+AGG | - | chr1_3:53278647-53278666 | Msa0125090:CDS | 45.0% | |
| GGATTCCAATCGTCGAAGAA+TGG | - | chr1_3:53278736-53278755 | Msa0125090:CDS | 45.0% | |
| TCGTTCCATTCTTCGACGAT+TGG | + | chr1_3:53278744-53278763 | None:intergenic | 45.0% | |
| GAGTAAGATGCCATGGTATG+TGG | - | chr1_3:53278794-53278813 | Msa0125090:CDS | 45.0% | |
| ACATTCTGCACCACATACCA+TGG | + | chr1_3:53278807-53278826 | None:intergenic | 45.0% | |
| GGTGTTTAGTCCTCAAGGAA+AGG | - | chr1_3:53278893-53278912 | Msa0125090:CDS | 45.0% | |
| TTGTGTTGCACCTTTCCTTG+AGG | + | chr1_3:53278906-53278925 | None:intergenic | 45.0% | |
| CAAGGCTTTCCCCTTTACAA+TGG | - | chr1_3:53278959-53278978 | Msa0125090:CDS | 45.0% | |
| ! | TGGGAGAGAAGCGATTTTAG+TGG | - | chr1_3:53279135-53279154 | Msa0125090:CDS | 45.0% |
| TTCTGCTCGGTCTGCATTAT+AGG | + | chr1_3:53279529-53279548 | None:intergenic | 45.0% | |
| !! | CTCGTAAGTCGATTTTGGAG+CGG | - | chr1_3:53279691-53279710 | Msa0125090:CDS | 45.0% |
| CAACAGATGGTCCTTTGCTA+AGG | + | chr1_3:53279819-53279838 | None:intergenic | 45.0% | |
| TGACCACTCAACACAACAGA+TGG | + | chr1_3:53279832-53279851 | None:intergenic | 45.0% | |
| TCTGTTGTGTTGAGTGGTCA+TGG | - | chr1_3:53279832-53279851 | Msa0125090:CDS | 45.0% | |
| ATGAGTGACACGAGCAAAAC+TGG | + | chr1_3:53279950-53279969 | None:intergenic | 45.0% | |
| TCCTGATTGTCCTAGTACCA+TGG | - | chr1_3:53280029-53280048 | Msa0125090:CDS | 45.0% | |
| TCCATGGTACTAGGACAATC+AGG | + | chr1_3:53280033-53280052 | None:intergenic | 45.0% | |
| ! | CGCTCCAAAATCGACTTACG+AGG | + | chr1_3:53279693-53279712 | None:intergenic | 50.0% |
| GGACCATCTGTTGTGTTGAG+TGG | - | chr1_3:53279826-53279845 | Msa0125090:CDS | 50.0% | |
| ! | CGCTCCAAAATCGACTTACG+AGG | + | chr1_3:53279693-53279712 | None:intergenic | 50.0% |
| GGACCATCTGTTGTGTTGAG+TGG | - | chr1_3:53279826-53279845 | Msa0125090:CDS | 50.0% | |
| ACGGCGGCCATGACAAAGAA+TGG | - | chr1_3:53279566-53279585 | Msa0125090:intron | 55.0% | |
| GGTTGGGCTCTCCTTAGCAA+AGG | - | chr1_3:53279805-53279824 | Msa0125090:CDS | 55.0% | |
| ACGGCGGCCATGACAAAGAA+TGG | - | chr1_3:53279566-53279585 | Msa0125090:intron | 55.0% | |
| GGTTGGGCTCTCCTTAGCAA+AGG | - | chr1_3:53279805-53279824 | Msa0125090:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 53278600 | 53280110 | 53278600 | ID=Msa0125090;Name=Msa0125090 |
| chr1_3 | mRNA | 53278600 | 53280110 | 53278600 | ID=Msa0125090-mRNA-1;Parent=Msa0125090;Name=Msa0125090-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|2|0|330 |
| chr1_3 | exon | 53279691 | 53280110 | 53279691 | ID=Msa0125090-mRNA-1:exon:16336;Parent=Msa0125090-mRNA-1 |
| chr1_3 | exon | 53278600 | 53279172 | 53278600 | ID=Msa0125090-mRNA-1:exon:16335;Parent=Msa0125090-mRNA-1 |
| chr1_3 | CDS | 53279691 | 53280110 | 53279691 | ID=Msa0125090-mRNA-1:cds;Parent=Msa0125090-mRNA-1 |
| chr1_3 | CDS | 53278600 | 53279172 | 53278600 | ID=Msa0125090-mRNA-1:cds;Parent=Msa0125090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
