Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0252770 | XP_003596140.2 | 97.436 | 273 | 7 | 0 | 1 | 273 | 1 | 273 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0252770 | A0A396JHI5 | 97.436 | 273 | 7 | 0 | 1 | 273 | 1 | 273 | 0.0 | 570 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0252770 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0252770 | 0.804237 | 2.378735e-49 | -8.615850e-47 |
| Msa0006980 | Msa0252770 | 0.823597 | 1.271257e-53 | -8.615850e-47 |
| Msa0015710 | Msa0252770 | 0.833661 | 4.692305e-56 | -8.615850e-47 |
| Msa0016120 | Msa0252770 | 0.829857 | 4.070562e-55 | -8.615850e-47 |
| Msa0019600 | Msa0252770 | 0.831681 | 1.454415e-55 | -8.615850e-47 |
| Msa0050040 | Msa0252770 | 0.818463 | 1.934879e-52 | -8.615850e-47 |
| Msa0055450 | Msa0252770 | 0.847138 | 1.398211e-59 | -8.615850e-47 |
| Msa0080990 | Msa0252770 | 0.866515 | 2.695015e-65 | -8.615850e-47 |
| Msa0084500 | Msa0252770 | 0.802446 | 5.589782e-49 | -8.615850e-47 |
| Msa0102990 | Msa0252770 | 0.818267 | 2.142542e-52 | -8.615850e-47 |
| Msa0109880 | Msa0252770 | 0.829710 | 4.421162e-55 | -8.615850e-47 |
| Msa0111750 | Msa0252770 | 0.803566 | 3.278977e-49 | -8.615850e-47 |
| Msa0118400 | Msa0252770 | 0.803940 | 2.743068e-49 | -8.615850e-47 |
| Msa0124130 | Msa0252770 | 0.854255 | 1.389985e-61 | -8.615850e-47 |
| Msa0141120 | Msa0252770 | 0.818250 | 2.161899e-52 | -8.615850e-47 |
| Msa0141600 | Msa0252770 | 0.802959 | 4.380607e-49 | -8.615850e-47 |
| Msa0147600 | Msa0252770 | 0.806380 | 8.461279e-50 | -8.615850e-47 |
| Msa0149140 | Msa0252770 | 0.841815 | 3.779209e-58 | -8.615850e-47 |
| Msa0152500 | Msa0252770 | 0.816560 | 5.193080e-52 | -8.615850e-47 |
| Msa0156250 | Msa0252770 | 0.869236 | 3.602241e-66 | -8.615850e-47 |
| Msa0161680 | Msa0252770 | 0.800714 | 1.266225e-48 | -8.615850e-47 |
| Msa0185490 | Msa0252770 | 0.844232 | 8.585109e-59 | -8.615850e-47 |
| Msa0197100 | Msa0252770 | 0.860139 | 2.544052e-63 | -8.615850e-47 |
| Msa0203030 | Msa0252770 | 0.811251 | 7.686056e-51 | -8.615850e-47 |
| Msa0212150 | Msa0252770 | 0.962440 | 7.031086e-121 | -8.615850e-47 |
| Msa0215640 | Msa0252770 | 0.809925 | 1.486705e-50 | -8.615850e-47 |
| Msa0219190 | Msa0252770 | 0.811474 | 6.877394e-51 | -8.615850e-47 |
| Msa0221290 | Msa0252770 | 0.857748 | 1.321634e-62 | -8.615850e-47 |
| Msa0239030 | Msa0252770 | 0.871415 | 6.953668e-67 | -8.615850e-47 |
| Msa0252630 | Msa0252770 | 0.819044 | 1.428231e-52 | -8.615850e-47 |
| Msa0252770 | Msa0276080 | 0.801250 | 9.840558e-49 | -8.615850e-47 |
| Msa0252770 | Msa0276740 | 0.857289 | 1.806357e-62 | -8.615850e-47 |
| Msa0252770 | Msa0289920 | 0.915375 | 6.346545e-85 | -8.615850e-47 |
| Msa0252770 | Msa0298240 | 0.826964 | 2.031242e-54 | -8.615850e-47 |
| Msa0252770 | Msa0301580 | 0.803928 | 2.758843e-49 | -8.615850e-47 |
| Msa0252770 | Msa0306120 | 0.902494 | 9.155839e-79 | -8.615850e-47 |
| Msa0252770 | Msa0316680 | 0.861747 | 8.257548e-64 | -8.615850e-47 |
| Msa0252770 | Msa0322830 | 0.812023 | 5.221831e-51 | -8.615850e-47 |
| Msa0252770 | Msa0322840 | 0.845843 | 3.153098e-59 | -8.615850e-47 |
| Msa0252770 | Msa0322860 | 0.806689 | 7.282067e-50 | -8.615850e-47 |
| Msa0252770 | Msa0329620 | 0.977971 | 7.368742e-145 | -8.615850e-47 |
| Msa0252770 | Msa0331540 | 0.806464 | 8.123188e-50 | -8.615850e-47 |
| Msa0252770 | Msa0340480 | 0.828965 | 6.705239e-55 | -8.615850e-47 |
| Msa0252770 | Msa0343660 | 0.808824 | 2.561164e-50 | -8.615850e-47 |
| Msa0252770 | Msa0359250 | 0.888426 | 5.966530e-73 | -8.615850e-47 |
| Msa0252770 | Msa0373960 | 0.819945 | 8.895844e-53 | -8.615850e-47 |
| Msa0252770 | Msa0375680 | 0.819579 | 1.078401e-52 | -8.615850e-47 |
| Msa0252770 | Msa0384910 | 0.832210 | 1.076359e-55 | -8.615850e-47 |
| Msa0252770 | Msa0392420 | 0.805758 | 1.143566e-49 | -8.615850e-47 |
| Msa0252770 | Msa0406000 | 0.899133 | 2.679390e-77 | -8.615850e-47 |
| Msa0252770 | Msa0423100 | 0.815361 | 9.618462e-52 | -8.615850e-47 |
| Msa0252770 | Msa0424330 | 0.855210 | 7.348355e-62 | -8.615850e-47 |
| Msa0252770 | Msa0424340 | 0.849749 | 2.647968e-60 | -8.615850e-47 |
| Msa0252770 | Msa0424350 | 0.838432 | 2.885813e-57 | -8.615850e-47 |
| Msa0252770 | Msa0441590 | 0.801778 | 7.667815e-49 | -8.615850e-47 |
| Msa0252770 | Msa0451400 | 0.898490 | 5.043481e-77 | -8.615850e-47 |
| Msa0252770 | Msa0469260 | 0.803265 | 3.785769e-49 | -8.615850e-47 |
| Msa0252770 | Msa0471240 | 0.814122 | 1.809632e-51 | -8.615850e-47 |
| Msa0252770 | Msa0487570 | 0.811445 | 6.974847e-51 | -8.615850e-47 |
| Msa0252770 | Msa0487630 | 0.801062 | 1.075187e-48 | -8.615850e-47 |
| Msa0252770 | Msa0492190 | 0.883072 | 6.113569e-71 | -8.615850e-47 |
| Msa0252770 | Msa0515950 | 0.857836 | 1.244312e-62 | -8.615850e-47 |
| Msa0252770 | Msa0534930 | 0.830458 | 2.904589e-55 | -8.615850e-47 |
| Msa0252770 | Msa0535040 | 0.816865 | 4.436511e-52 | -8.615850e-47 |
| Msa0252770 | Msa0537920 | 0.812454 | 4.204752e-51 | -8.615850e-47 |
| Msa0252770 | Msa0538220 | 0.804140 | 2.491624e-49 | -8.615850e-47 |
| Msa0252770 | Msa0575740 | 0.832415 | 9.579414e-56 | -8.615850e-47 |
| Msa0252770 | Msa0591790 | 0.861134 | 1.269945e-63 | -8.615850e-47 |
| Msa0252770 | Msa0591800 | 0.800869 | 1.176986e-48 | -8.615850e-47 |
| Msa0252770 | Msa0594090 | 0.867301 | 1.514160e-65 | -8.615850e-47 |
| Msa0252770 | Msa0639460 | 0.802577 | 5.253062e-49 | -8.615850e-47 |
| Msa0252770 | Msa0641250 | 0.836979 | 6.809612e-57 | -8.615850e-47 |
| Msa0252770 | Msa0641360 | 0.825229 | 5.253003e-54 | -8.615850e-47 |
| Msa0252770 | Msa0669840 | 0.878210 | 3.375219e-69 | -8.615850e-47 |
| Msa0252770 | Msa0679830 | 0.802085 | 6.631386e-49 | -8.615850e-47 |
| Msa0252770 | Msa0711320 | 0.808610 | 2.846219e-50 | -8.615850e-47 |
| Msa0252770 | Msa0737190 | 0.821922 | 3.120989e-53 | -8.615850e-47 |
| Msa0252770 | Msa0739580 | 0.917061 | 8.392887e-86 | -8.615850e-47 |
| Msa0252770 | Msa0748000 | 0.864747 | 9.732568e-65 | -8.615850e-47 |
| Msa0252770 | Msa0770290 | 0.830817 | 2.371556e-55 | -8.615850e-47 |
| Msa0252770 | Msa0778930 | 0.814784 | 1.291242e-51 | -8.615850e-47 |
| Msa0252770 | Msa0782360 | 0.897012 | 2.123179e-76 | -8.615850e-47 |
| Msa0252770 | Msa0816450 | 0.801759 | 7.736581e-49 | -8.615850e-47 |
| Msa0252770 | Msa0819890 | 0.844750 | 6.231549e-59 | -8.615850e-47 |
| Msa0252770 | Msa0823400 | 0.815350 | 9.672429e-52 | -8.615850e-47 |
| Msa0252770 | Msa0828830 | 0.840707 | 7.392789e-58 | -8.615850e-47 |
| Msa0252770 | Msa0844560 | 0.804166 | 2.460614e-49 | -8.615850e-47 |
| Msa0252770 | Msa0849280 | 0.835517 | 1.602919e-56 | -8.615850e-47 |
| Msa0252770 | Msa0851020 | 0.840556 | 8.098805e-58 | -8.615850e-47 |
| Msa0252770 | Msa0860160 | 0.817346 | 3.459477e-52 | -8.615850e-47 |
| Msa0252770 | Msa0860280 | 0.910601 | 1.561240e-82 | -8.615850e-47 |
| Msa0252770 | Msa0867350 | 0.849418 | 3.276335e-60 | -8.615850e-47 |
| Msa0252770 | Msa0898730 | 0.846643 | 1.909819e-59 | -8.615850e-47 |
| Msa0252770 | Msa0899950 | 0.815320 | 9.821112e-52 | -8.615850e-47 |
| Msa0252770 | Msa0909140 | 0.823327 | 1.469994e-53 | -8.615850e-47 |
| Msa0252770 | Msa0911540 | 0.827478 | 1.530206e-54 | -8.615850e-47 |
| Msa0252770 | Msa0929870 | 0.844220 | 8.652317e-59 | -8.615850e-47 |
| Msa0252770 | Msa0936410 | 0.811933 | 5.462441e-51 | -8.615850e-47 |
| Msa0252770 | Msa0941820 | 0.825371 | 4.861231e-54 | -8.615850e-47 |
| Msa0252770 | Msa0944760 | 0.836276 | 1.028600e-56 | -8.615850e-47 |
| Msa0252770 | Msa0944880 | 0.824149 | 9.437551e-54 | -8.615850e-47 |
| Msa0252770 | Msa0946210 | 0.805082 | 1.585015e-49 | -8.615850e-47 |
| Msa0252770 | Msa0961560 | 0.836591 | 8.553573e-57 | -8.615850e-47 |
| Msa0252770 | Msa0961770 | 0.811081 | 8.367334e-51 | -8.615850e-47 |
| Msa0252770 | Msa0964840 | 0.831601 | 1.521789e-55 | -8.615850e-47 |
| Msa0252770 | Msa0965310 | 0.830165 | 3.423995e-55 | -8.615850e-47 |
| Msa0252770 | Msa0973250 | 0.819336 | 1.225053e-52 | -8.615850e-47 |
| Msa0252770 | Msa0986030 | 0.827818 | 1.268165e-54 | -8.615850e-47 |
| Msa0252770 | Msa0996270 | 0.812076 | 5.084656e-51 | -8.615850e-47 |
| Msa0252770 | Msa0999300 | 0.872133 | 4.017769e-67 | -8.615850e-47 |
| Msa0252770 | Msa0999320 | 0.813826 | 2.103035e-51 | -8.615850e-47 |
| Msa0252770 | Msa0999340 | 0.813928 | 1.996931e-51 | -8.615850e-47 |
| Msa0252770 | Msa0999350 | 0.849676 | 2.775289e-60 | -8.615850e-47 |
| Msa0252770 | Msa0999360 | 0.870076 | 1.916795e-66 | -8.615850e-47 |
| Msa0252770 | Msa0999390 | 0.824585 | 7.454557e-54 | -8.615850e-47 |
| Msa0252770 | Msa0999400 | 0.843128 | 1.695351e-58 | -8.615850e-47 |
| Msa0252770 | Msa0999410 | 0.865690 | 4.918024e-65 | -8.615850e-47 |
| Msa0252770 | Msa0999700 | 0.814298 | 1.654625e-51 | -8.615850e-47 |
| Msa0252770 | Msa1001870 | 0.813968 | 1.956718e-51 | -8.615850e-47 |
| Msa0252770 | Msa1001890 | 0.848665 | 5.304809e-60 | -8.615850e-47 |
| Msa0252770 | Msa1010840 | 0.845887 | 3.067171e-59 | -8.615850e-47 |
| Msa0252770 | Msa1034680 | 0.840795 | 7.010508e-58 | -8.615850e-47 |
| Msa0252770 | Msa1037770 | 0.853584 | 2.170045e-61 | -8.615850e-47 |
| Msa0252770 | Msa1037890 | 0.839458 | 1.565585e-57 | -8.615850e-47 |
| Msa0252770 | Msa1037900 | 0.841920 | 3.545051e-58 | -8.615850e-47 |
| Msa0252770 | Msa1037910 | 0.831192 | 1.918353e-55 | -8.615850e-47 |
| Msa0252770 | Msa1041530 | 0.803269 | 3.778775e-49 | -8.615850e-47 |
| Msa0252770 | Msa1047990 | 0.802950 | 4.399003e-49 | -8.615850e-47 |
| Msa0252770 | Msa1052360 | 0.843934 | 1.032500e-58 | -8.615850e-47 |
| Msa0252770 | Msa1055060 | 0.820562 | 6.424119e-53 | -8.615850e-47 |
| Msa0252770 | Msa1070420 | 0.807438 | 5.055516e-50 | -8.615850e-47 |
| Msa0252770 | Msa1081570 | 0.820050 | 8.416297e-53 | -8.615850e-47 |
| Msa0252770 | Msa1084520 | 0.829062 | 6.352654e-55 | -8.615850e-47 |
| Msa0252770 | Msa1092020 | 0.822131 | 2.790589e-53 | -8.615850e-47 |
| Msa0252770 | Msa1096210 | 0.858948 | 5.801922e-63 | -8.615850e-47 |
| Msa0252770 | Msa1114990 | 0.808564 | 2.911673e-50 | -8.615850e-47 |
| Msa0252770 | Msa1123880 | 0.802328 | 5.910622e-49 | -8.615850e-47 |
| Msa0252770 | Msa1125810 | 0.808033 | 3.778206e-50 | -8.615850e-47 |
| Msa0252770 | Msa1127140 | 0.822516 | 2.272210e-53 | -8.615850e-47 |
| Msa0252770 | Msa1129960 | 0.826289 | 2.943034e-54 | -8.615850e-47 |
| Msa0252770 | Msa1129970 | 0.811493 | 6.810091e-51 | -8.615850e-47 |
| Msa0252770 | Msa1130010 | 0.814773 | 1.298658e-51 | -8.615850e-47 |
| Msa0252770 | Msa1135380 | 0.829687 | 4.476829e-55 | -8.615850e-47 |
| Msa0252770 | Msa1140640 | 0.832353 | 9.920037e-56 | -8.615850e-47 |
| Msa0252770 | Msa1145020 | 0.842760 | 2.123922e-58 | -8.615850e-47 |
| Msa0252770 | Msa1166400 | 0.811378 | 7.214896e-51 | -8.615850e-47 |
| Msa0252770 | Msa1171310 | 0.821260 | 4.439088e-53 | -8.615850e-47 |
| Msa0252770 | Msa1176160 | 0.832410 | 9.602496e-56 | -8.615850e-47 |
| Msa0252770 | Msa1179280 | 0.826744 | 2.293188e-54 | -8.615850e-47 |
| Msa0252770 | Msa1200440 | 0.824968 | 6.054469e-54 | -8.615850e-47 |
| Msa0252770 | Msa1201110 | 0.840738 | 7.254663e-58 | -8.615850e-47 |
| Msa0252770 | Msa1201160 | 0.852574 | 4.222381e-61 | -8.615850e-47 |
| Msa0252770 | Msa1228190 | 0.900312 | 8.312134e-78 | -8.615850e-47 |
| Msa0252770 | Msa1233560 | 0.851935 | 6.417232e-61 | -8.615850e-47 |
| Msa0252770 | Msa1248040 | 0.829454 | 5.101657e-55 | -8.615850e-47 |
| Msa0252770 | Msa1271260 | 0.869429 | 3.118203e-66 | -8.615850e-47 |
| Msa0252770 | Msa1277400 | 0.814601 | 1.417659e-51 | -8.615850e-47 |
| Msa0252770 | Msa1294290 | 0.842788 | 2.088301e-58 | -8.615850e-47 |
| Msa0252770 | Msa1305510 | 0.866396 | 2.939030e-65 | -8.615850e-47 |
| Msa0252770 | Msa1307150 | 0.834943 | 2.237538e-56 | -8.615850e-47 |
| Msa0252770 | Msa1307190 | 0.840997 | 6.207360e-58 | -8.615850e-47 |
| Msa0252770 | Msa1313970 | 0.825484 | 4.570139e-54 | -8.615850e-47 |
| Msa0252770 | Msa1316540 | 0.801694 | 7.978379e-49 | -8.615850e-47 |
| Msa0252770 | Msa1339580 | 0.845495 | 3.919720e-59 | -8.615850e-47 |
| Msa0252770 | Msa1356990 | 0.856200 | 3.777154e-62 | -8.615850e-47 |
| Msa0252770 | Msa1374550 | 0.805991 | 1.021641e-49 | -8.615850e-47 |
| Msa0252770 | Msa1378770 | 0.804205 | 2.415869e-49 | -8.615850e-47 |
| Msa0252770 | Msa1379970 | 0.893610 | 5.354250e-75 | -8.615850e-47 |
| Msa0252770 | Msa1389050 | 0.817835 | 2.683973e-52 | -8.615850e-47 |
| Msa0252770 | Msa1394890 | 0.876017 | 1.950009e-68 | -8.615850e-47 |
| Msa0252770 | Msa1406780 | 0.907187 | 6.643749e-81 | -8.615850e-47 |
| Msa0252770 | Msa1420060 | 0.829215 | 5.829803e-55 | -8.615850e-47 |
| Msa0252770 | Msa1421550 | 0.864509 | 1.155293e-64 | -8.615850e-47 |
| Msa0252770 | Msa1423460 | 0.836468 | 9.195878e-57 | -8.615850e-47 |
| Msa0252770 | Msa1431850 | 0.914980 | 1.013099e-84 | -8.615850e-47 |
| Msa0252770 | Msa1435480 | 0.828319 | 9.603691e-55 | -8.615850e-47 |
| Msa0252770 | Msa1437700 | 0.800166 | 1.637119e-48 | -8.615850e-47 |
| Msa0252770 | Msa1437710 | 0.814013 | 1.912706e-51 | -8.615850e-47 |
| Msa0252770 | Msa1449940 | 0.855540 | 5.893176e-62 | -8.615850e-47 |
| Msa0252770 | Msa1455320 | 0.823032 | 1.723139e-53 | -8.615850e-47 |
| Msa0252770 | Msa1458910 | 0.809031 | 2.312982e-50 | -8.615850e-47 |
| Msa0252770 | Msa1459530 | 0.859693 | 3.467432e-63 | -8.615850e-47 |
| Msa0252770 | Msa1461060 | 0.848183 | 7.207328e-60 | -8.615850e-47 |
| Msa0252770 | Msa1462530 | 0.822986 | 1.766072e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0252770 | MtrunA17_Chr2g0311591 | 97.436 | 273 | 7 | 0 | 1 | 273 | 1 | 273 | 0.0 | 570 |
| Msa0252770 | MtrunA17_Chr8g0387241 | 77.419 | 62 | 14 | 0 | 156 | 217 | 211 | 272 | 1.32e-24 | 100 |
| Msa0252770 | MtrunA17_Chr5g0397361 | 53.846 | 91 | 39 | 1 | 143 | 233 | 149 | 236 | 9.79e-24 | 96.7 |
| Msa0252770 | MtrunA17_Chr1g0168401 | 45.192 | 104 | 47 | 1 | 124 | 217 | 263 | 366 | 2.33e-22 | 95.5 |
| Msa0252770 | MtrunA17_Chr1g0186171 | 56.164 | 73 | 32 | 0 | 151 | 223 | 297 | 369 | 1.81e-21 | 92.8 |
| Msa0252770 | MtrunA17_Chr2g0327621 | 45.000 | 120 | 54 | 2 | 106 | 214 | 81 | 199 | 9.92e-20 | 85.9 |
| Msa0252770 | MtrunA17_Chr4g0030421 | 59.677 | 62 | 25 | 0 | 155 | 216 | 20 | 81 | 3.38e-18 | 79.0 |
| Msa0252770 | MtrunA17_Chr3g0126721 | 60.000 | 50 | 20 | 0 | 166 | 215 | 226 | 275 | 5.20e-13 | 67.4 |
| Msa0252770 | MtrunA17_Chr1g0147111 | 53.061 | 49 | 23 | 0 | 166 | 214 | 228 | 276 | 9.09e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0252770 | AT3G12890.1 | 54.348 | 138 | 59 | 3 | 126 | 263 | 98 | 231 | 1.61e-43 | 149 |
| Msa0252770 | AT5G41380.1 | 75.806 | 62 | 15 | 0 | 156 | 217 | 201 | 262 | 5.21e-25 | 101 |
| Msa0252770 | AT1G63820.1 | 60.241 | 83 | 31 | 1 | 156 | 236 | 178 | 260 | 8.00e-24 | 98.2 |
| Msa0252770 | AT1G04500.4 | 42.857 | 126 | 55 | 3 | 107 | 231 | 237 | 346 | 1.82e-23 | 98.6 |
| Msa0252770 | AT1G04500.1 | 42.857 | 126 | 55 | 3 | 107 | 231 | 237 | 346 | 1.82e-23 | 98.6 |
| Msa0252770 | AT1G04500.3 | 42.857 | 126 | 55 | 3 | 107 | 231 | 228 | 337 | 2.00e-23 | 98.6 |
| Msa0252770 | AT2G33350.2 | 69.355 | 62 | 19 | 0 | 161 | 222 | 301 | 362 | 3.00e-22 | 95.5 |
| Msa0252770 | AT2G33350.4 | 69.355 | 62 | 19 | 0 | 161 | 222 | 290 | 351 | 3.03e-22 | 95.5 |
| Msa0252770 | AT2G33350.1 | 69.355 | 62 | 19 | 0 | 161 | 222 | 302 | 363 | 3.15e-22 | 95.5 |
| Msa0252770 | AT2G33350.5 | 69.355 | 62 | 19 | 0 | 161 | 222 | 310 | 371 | 3.80e-22 | 95.5 |
| Msa0252770 | AT5G59990.1 | 43.119 | 109 | 61 | 1 | 113 | 221 | 107 | 214 | 5.34e-15 | 73.2 |
| Msa0252770 | AT4G27900.1 | 42.254 | 71 | 35 | 1 | 144 | 214 | 194 | 258 | 5.68e-12 | 64.7 |
| Msa0252770 | AT4G27900.2 | 42.254 | 71 | 35 | 1 | 144 | 214 | 194 | 258 | 5.68e-12 | 64.7 |
| Msa0252770 | AT5G53420.2 | 55.102 | 49 | 22 | 0 | 166 | 214 | 135 | 183 | 6.41e-12 | 63.5 |
| Msa0252770 | AT5G53420.5 | 55.102 | 49 | 22 | 0 | 166 | 214 | 135 | 183 | 6.41e-12 | 63.5 |
| Msa0252770 | AT5G53420.4 | 55.102 | 49 | 22 | 0 | 166 | 214 | 135 | 183 | 6.41e-12 | 63.5 |
| Msa0252770 | AT5G53420.1 | 55.102 | 49 | 22 | 0 | 166 | 214 | 214 | 262 | 8.35e-12 | 64.3 |
Find 66 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTCTTGGATTCCGAATT+TGG | 0.102196 | 2_2:-44328247 | Msa0252770:CDS |
| GTCCCTATCTCCTTCATTCA+TGG | 0.225122 | 2_2:-44328451 | Msa0252770:CDS |
| ATTGTGATGCTTCGGCTTCT+TGG | 0.226368 | 2_2:-44328260 | Msa0252770:CDS |
| TTTATTATCAGATTGTAAAA+TGG | 0.231726 | 2_2:-44328196 | Msa0252770:CDS |
| CATAAATTGAAAAGGAAAAT+TGG | 0.264212 | 2_2:+44328473 | None:intergenic |
| CTAATGTTGCAAGAGAAAAT+TGG | 0.300530 | 2_2:-44328041 | Msa0252770:CDS |
| AATAATCAGCAACATATTAT+TGG | 0.306000 | 2_2:-44328129 | Msa0252770:CDS |
| TGCTGATTCATTTCAGTTCC+AGG | 0.315116 | 2_2:-44327128 | Msa0252770:intron |
| CACATTAATGAAGATTTCTA+TGG | 0.323076 | 2_2:-44327151 | Msa0252770:CDS |
| TCAAGAGGCCATGGCAAGTT+TGG | 0.324460 | 2_2:-44326514 | Msa0252770:CDS |
| TACCTTCCTACCTTTATGTT+TGG | 0.326979 | 2_2:+44327475 | None:intergenic |
| GCAACAAGATTTCGCTGTTC+CGG | 0.338361 | 2_2:-44328220 | Msa0252770:CDS |
| TCTTGTTGCTCAACCAAATT+CGG | 0.343740 | 2_2:+44328234 | None:intergenic |
| AAGCCATGAATGAAGGAGAT+AGG | 0.372841 | 2_2:+44328448 | None:intergenic |
| TTATTATCAGATTGTAAAAT+GGG | 0.383948 | 2_2:-44328195 | Msa0252770:CDS |
| GATATGTTTGTGTTTGTGTT+TGG | 0.388806 | 2_2:+44328587 | None:intergenic |
| GTCACTTGATTGTGATGCTT+CGG | 0.400739 | 2_2:-44328268 | Msa0252770:CDS |
| GAAAATATATAAGACCTTGA+TGG | 0.404923 | 2_2:+44327381 | None:intergenic |
| TGGAGGGATATGTTTGTGTT+TGG | 0.405797 | 2_2:+44328519 | None:intergenic |
| ATGAATATGTATGTATATAT+AGG | 0.418274 | 2_2:+44328565 | None:intergenic |
| AATTAATTGCAGGGGATTCA+AGG | 0.434763 | 2_2:-44327523 | Msa0252770:intron |
| TAATGTTGCAAGAGAAAATT+GGG | 0.435066 | 2_2:-44328040 | Msa0252770:intron |
| CATATCATCTGGTGATGAAT+GGG | 0.440400 | 2_2:+44326482 | None:intergenic |
| TGATAGAAGAGTAAGAGTGA+GGG | 0.443578 | 2_2:-44327248 | Msa0252770:CDS |
| GAAGAGTAAGAGTGAGGGGA+AGG | 0.444124 | 2_2:-44327243 | Msa0252770:CDS |
| ACATATCATCTGGTGATGAA+TGG | 0.448395 | 2_2:+44326481 | None:intergenic |
| AGTTGAAGAGCCAAACATAA+AGG | 0.450736 | 2_2:-44327485 | Msa0252770:CDS |
| AGCTAGTGTGAAAGGTGAAT+AGG | 0.452884 | 2_2:-44326361 | Msa0252770:three_prime_UTR |
| GGAGGGTTTCAGAATTTCAA+TGG | 0.461142 | 2_2:-44328162 | Msa0252770:CDS |
| GCAACATTAGGATAAGTTGT+AGG | 0.468600 | 2_2:+44328054 | None:intergenic |
| TGATTACTATATGTAGCTCT+TGG | 0.472384 | 2_2:-44326416 | Msa0252770:three_prime_UTR |
| TAATTAATTCACATATCATC+TGG | 0.472556 | 2_2:+44326471 | None:intergenic |
| GATAGGGACATAAATTGAAA+AGG | 0.485582 | 2_2:+44328465 | None:intergenic |
| CTGATAGAAGAGTAAGAGTG+AGG | 0.485744 | 2_2:-44327249 | Msa0252770:CDS |
| TTGGAGCATGGCTTCTCACA+AGG | 0.486813 | 2_2:-44326397 | Msa0252770:three_prime_UTR |
| AGAAGATCAATGTTGTGGTT+TGG | 0.497235 | 2_2:-44328094 | Msa0252770:CDS |
| ATGCCTGTTTACGAAAATCA+TGG | 0.510974 | 2_2:-44328309 | Msa0252770:CDS |
| TTACAATCTGATAATAAAGC+CGG | 0.515082 | 2_2:+44328201 | None:intergenic |
| GAAGGTACTCAGAAGAAGAA+AGG | 0.519719 | 2_2:-44327459 | Msa0252770:CDS |
| GATAGAAGAGTAAGAGTGAG+GGG | 0.529042 | 2_2:-44327247 | Msa0252770:CDS |
| AGCCATGAATGAAGGAGATA+GGG | 0.537940 | 2_2:+44328449 | None:intergenic |
| GTGGAAGAAGCCATGAATGA+AGG | 0.539473 | 2_2:+44328441 | None:intergenic |
| GCAGTTAAAGAATGAAGAAG+AGG | 0.550467 | 2_2:-44326544 | Msa0252770:intron |
| TAGTTTGTATAGAAGTGATG+AGG | 0.558490 | 2_2:+44328414 | None:intergenic |
| ATAGAAGTGATGAGGGATGG+TGG | 0.561524 | 2_2:+44328422 | None:intergenic |
| ATTAAGCTAGCTAGTGTGAA+AGG | 0.561995 | 2_2:-44326369 | Msa0252770:three_prime_UTR |
| TCTGATTTCACCACACAACA+AGG | 0.572962 | 2_2:-44328387 | Msa0252770:CDS |
| TATATGTAGCTCTTGGAGCA+TGG | 0.573046 | 2_2:-44326409 | Msa0252770:three_prime_UTR |
| GAAGAGCCAAACATAAAGGT+AGG | 0.576416 | 2_2:-44327481 | Msa0252770:CDS |
| AGCCAAACATAAAGGTAGGA+AGG | 0.578415 | 2_2:-44327477 | Msa0252770:CDS |
| TAAAGAATGAAGAAGAGGAC+TGG | 0.579395 | 2_2:-44326539 | Msa0252770:CDS |
| GGACTGGCTTCAAGAGGCCA+TGG | 0.582269 | 2_2:-44326523 | Msa0252770:CDS |
| AAACTTCAACAAAACCATCA+AGG | 0.586667 | 2_2:-44327395 | Msa0252770:intron |
| AGTTTGTATAGAAGTGATGA+GGG | 0.591635 | 2_2:+44328415 | None:intergenic |
| AGATGTAAACTCTAATTGCA+TGG | 0.600603 | 2_2:-44326253 | Msa0252770:three_prime_UTR |
| TAAATAGACCAAACTTGCCA+TGG | 0.601398 | 2_2:+44326506 | None:intergenic |
| ACATTAGGATAAGTTGTAGG+TGG | 0.601914 | 2_2:+44328057 | None:intergenic |
| GATGGACAATACTATGATGT+GGG | 0.618810 | 2_2:-44328349 | Msa0252770:CDS |
| CTGATTTCACCACACAACAA+GGG | 0.621194 | 2_2:-44328386 | Msa0252770:CDS |
| TGTATAGAAGTGATGAGGGA+TGG | 0.634530 | 2_2:+44328419 | None:intergenic |
| TGATGGACAATACTATGATG+TGG | 0.641072 | 2_2:-44328350 | Msa0252770:CDS |
| AGAAGAGGACTGGCTTCAAG+AGG | 0.645775 | 2_2:-44326529 | Msa0252770:CDS |
| GACATGTGAAGAAGATCACA+TGG | 0.652465 | 2_2:-44327203 | Msa0252770:CDS |
| TTTGTAGAAGATCAATGTTG+TGG | 0.662640 | 2_2:-44328099 | Msa0252770:CDS |
| TGAAGAAAACCCTTGTTGTG+TGG | 0.693927 | 2_2:+44328377 | None:intergenic |
| ATGGACAATACTATGATGTG+GGG | 0.739532 | 2_2:-44328348 | Msa0252770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTTAAAAATTAACTAA+AGG | + | chr2_2:44327026-44327045 | None:intergenic | 10.0% |
| !!! | ATGTTTTTTTTTTTTTTGAA+AGG | - | chr2_2:44327195-44327214 | Msa0252770:CDS | 10.0% |
| !!! | CATTTTTATTAGATTTTTTT+TGG | - | chr2_2:44327828-44327847 | Msa0252770:intron | 10.0% |
| !!! | TTATATACTTTTTTTTTGTA+GGG | + | chr2_2:44328124-44328143 | None:intergenic | 10.0% |
| !!! | AAGTATATAACTTTTTTTTA+AGG | - | chr2_2:44328134-44328153 | Msa0252770:CDS | 10.0% |
| !! | AAAACTTAAAAATTAACTAA+AGG | + | chr2_2:44327026-44327045 | None:intergenic | 10.0% |
| !!! | ATGTTTTTTTTTTTTTTGAA+AGG | - | chr2_2:44327195-44327214 | Msa0252770:CDS | 10.0% |
| !!! | CATTTTTATTAGATTTTTTT+TGG | - | chr2_2:44327828-44327847 | Msa0252770:intron | 10.0% |
| !!! | TTATATACTTTTTTTTTGTA+GGG | + | chr2_2:44328124-44328143 | None:intergenic | 10.0% |
| !!! | AAGTATATAACTTTTTTTTA+AGG | - | chr2_2:44328134-44328153 | Msa0252770:CDS | 10.0% |
| !! | ATGAATATGTATGTATATAT+AGG | + | chr2_2:44326283-44326302 | None:intergenic | 15.0% |
| !! | TTTATTATCAGATTGTAAAA+TGG | - | chr2_2:44326649-44326668 | Msa0252770:intron | 15.0% |
| !! | TTATTATCAGATTGTAAAAT+GGG | - | chr2_2:44326650-44326669 | Msa0252770:intron | 15.0% |
| !! | TATACATGTCTATTTATATT+TGG | + | chr2_2:44327267-44327286 | None:intergenic | 15.0% |
| !!! | ATAGTTTAGTACTTTTTTTA+GGG | + | chr2_2:44327876-44327895 | None:intergenic | 15.0% |
| !!! | TATAGTTTAGTACTTTTTTT+AGG | + | chr2_2:44327877-44327896 | None:intergenic | 15.0% |
| !!! | TATATACTTTTTTTTTGTAG+GGG | + | chr2_2:44328123-44328142 | None:intergenic | 15.0% |
| !!! | GTTATATACTTTTTTTTTGT+AGG | + | chr2_2:44328125-44328144 | None:intergenic | 15.0% |
| !!! | AAAATTCATCTCTAATTTTA+TGG | + | chr2_2:44328181-44328200 | None:intergenic | 15.0% |
| !! | ATCAATTTAAGAACATAATT+AGG | + | chr2_2:44328271-44328290 | None:intergenic | 15.0% |
| !! | ATGAATATGTATGTATATAT+AGG | + | chr2_2:44326283-44326302 | None:intergenic | 15.0% |
| !! | TTTATTATCAGATTGTAAAA+TGG | - | chr2_2:44326649-44326668 | Msa0252770:intron | 15.0% |
| !! | TTATTATCAGATTGTAAAAT+GGG | - | chr2_2:44326650-44326669 | Msa0252770:intron | 15.0% |
| !! | TATACATGTCTATTTATATT+TGG | + | chr2_2:44327267-44327286 | None:intergenic | 15.0% |
| !!! | ATAGTTTAGTACTTTTTTTA+GGG | + | chr2_2:44327876-44327895 | None:intergenic | 15.0% |
| !!! | TATAGTTTAGTACTTTTTTT+AGG | + | chr2_2:44327877-44327896 | None:intergenic | 15.0% |
| !!! | TATATACTTTTTTTTTGTAG+GGG | + | chr2_2:44328123-44328142 | None:intergenic | 15.0% |
| !!! | GTTATATACTTTTTTTTTGT+AGG | + | chr2_2:44328125-44328144 | None:intergenic | 15.0% |
| !!! | AAAATTCATCTCTAATTTTA+TGG | + | chr2_2:44328181-44328200 | None:intergenic | 15.0% |
| !! | ATCAATTTAAGAACATAATT+AGG | + | chr2_2:44328271-44328290 | None:intergenic | 15.0% |
| !! | CATAAATTGAAAAGGAAAAT+TGG | + | chr2_2:44326375-44326394 | None:intergenic | 20.0% |
| !! | AATAATCAGCAACATATTAT+TGG | - | chr2_2:44326716-44326735 | Msa0252770:intron | 20.0% |
| !! | TATAGATTGAATGAAACATT+AGG | + | chr2_2:44326846-44326865 | None:intergenic | 20.0% |
| !!! | TTAACTTGAAATTAATTGCA+GGG | - | chr2_2:44327313-44327332 | Msa0252770:intron | 20.0% |
| !!! | TTTTTGGTGAAAATGTTTAA+CGG | + | chr2_2:44327920-44327939 | None:intergenic | 20.0% |
| !! | TTTAATTCATATACACTAAG+TGG | - | chr2_2:44327965-44327984 | Msa0252770:intron | 20.0% |
| !!! | AACTAAACAGTTTTTATAGT+CGG | + | chr2_2:44327999-44328018 | None:intergenic | 20.0% |
| !! | TAATTAATTCACATATCATC+TGG | + | chr2_2:44328377-44328396 | None:intergenic | 20.0% |
| !! | CATAAATTGAAAAGGAAAAT+TGG | + | chr2_2:44326375-44326394 | None:intergenic | 20.0% |
| !! | AATAATCAGCAACATATTAT+TGG | - | chr2_2:44326716-44326735 | Msa0252770:intron | 20.0% |
| !! | TATAGATTGAATGAAACATT+AGG | + | chr2_2:44326846-44326865 | None:intergenic | 20.0% |
| !!! | TTAACTTGAAATTAATTGCA+GGG | - | chr2_2:44327313-44327332 | Msa0252770:intron | 20.0% |
| !!! | TTTTTGGTGAAAATGTTTAA+CGG | + | chr2_2:44327920-44327939 | None:intergenic | 20.0% |
| !! | TTTAATTCATATACACTAAG+TGG | - | chr2_2:44327965-44327984 | Msa0252770:intron | 20.0% |
| !!! | AACTAAACAGTTTTTATAGT+CGG | + | chr2_2:44327999-44328018 | None:intergenic | 20.0% |
| !! | TAATTAATTCACATATCATC+TGG | + | chr2_2:44328377-44328396 | None:intergenic | 20.0% |
| !!! | TATGTTTGTGTTTGGTTTTT+TGG | + | chr2_2:44326321-44326340 | None:intergenic | 25.0% |
| ! | TTACAATCTGATAATAAAGC+CGG | + | chr2_2:44326647-44326666 | None:intergenic | 25.0% |
| !! | GATTGTAAAATGGGATTTTA+TGG | - | chr2_2:44326659-44326678 | Msa0252770:intron | 25.0% |
| ! | TAATGTTGCAAGAGAAAATT+GGG | - | chr2_2:44326805-44326824 | Msa0252770:intron | 25.0% |
| !! | GTTAACTTGAAATTAATTGC+AGG | - | chr2_2:44327312-44327331 | Msa0252770:intron | 25.0% |
| ! | TAACTTGAAATTAATTGCAG+GGG | - | chr2_2:44327314-44327333 | Msa0252770:intron | 25.0% |
| ! | GAAAATATATAAGACCTTGA+TGG | + | chr2_2:44327467-44327486 | None:intergenic | 25.0% |
| !! | GTCTTATATATTTTCTCACA+TGG | - | chr2_2:44327472-44327491 | Msa0252770:CDS | 25.0% |
| !! | TTATATATTTTCTCACATGG+TGG | - | chr2_2:44327475-44327494 | Msa0252770:CDS | 25.0% |
| ! | CATACTGTAAAATTATGTGA+AGG | + | chr2_2:44327558-44327577 | None:intergenic | 25.0% |
| ! | CACATTAATGAAGATTTCTA+TGG | - | chr2_2:44327694-44327713 | Msa0252770:intron | 25.0% |
| !! | TTTTGGTGAAAATGTTTAAC+GGG | + | chr2_2:44327919-44327938 | None:intergenic | 25.0% |
| !! | GTCTACATTTTGTGTTTAAT+TGG | - | chr2_2:44328226-44328245 | Msa0252770:CDS | 25.0% |
| !!! | TATGTTTGTGTTTGGTTTTT+TGG | + | chr2_2:44326321-44326340 | None:intergenic | 25.0% |
| ! | TTACAATCTGATAATAAAGC+CGG | + | chr2_2:44326647-44326666 | None:intergenic | 25.0% |
| !! | GATTGTAAAATGGGATTTTA+TGG | - | chr2_2:44326659-44326678 | Msa0252770:intron | 25.0% |
| ! | TAATGTTGCAAGAGAAAATT+GGG | - | chr2_2:44326805-44326824 | Msa0252770:intron | 25.0% |
| !! | GTTAACTTGAAATTAATTGC+AGG | - | chr2_2:44327312-44327331 | Msa0252770:intron | 25.0% |
| ! | TAACTTGAAATTAATTGCAG+GGG | - | chr2_2:44327314-44327333 | Msa0252770:intron | 25.0% |
| ! | GAAAATATATAAGACCTTGA+TGG | + | chr2_2:44327467-44327486 | None:intergenic | 25.0% |
| !! | GTCTTATATATTTTCTCACA+TGG | - | chr2_2:44327472-44327491 | Msa0252770:CDS | 25.0% |
| !! | TTATATATTTTCTCACATGG+TGG | - | chr2_2:44327475-44327494 | Msa0252770:CDS | 25.0% |
| ! | CATACTGTAAAATTATGTGA+AGG | + | chr2_2:44327558-44327577 | None:intergenic | 25.0% |
| ! | CACATTAATGAAGATTTCTA+TGG | - | chr2_2:44327694-44327713 | Msa0252770:intron | 25.0% |
| !! | TTTTGGTGAAAATGTTTAAC+GGG | + | chr2_2:44327919-44327938 | None:intergenic | 25.0% |
| !! | GTCTACATTTTGTGTTTAAT+TGG | - | chr2_2:44328226-44328245 | Msa0252770:CDS | 25.0% |
| !!! | TTTGTGTTTGGTTTTTGGTT+TGG | + | chr2_2:44326249-44326268 | None:intergenic | 30.0% |
| !!! | TTGTGTTTGTGTTTGGTTTT+TGG | + | chr2_2:44326254-44326273 | None:intergenic | 30.0% |
| GATATGTTTGTGTTTGTGTT+TGG | + | chr2_2:44326261-44326280 | None:intergenic | 30.0% | |
| !!! | TTGTGTTTGGTTTTTTGGTT+TGG | + | chr2_2:44326316-44326335 | None:intergenic | 30.0% |
| !!! | TTTTTTGTTGTGAATGTGGA+GGG | + | chr2_2:44326345-44326364 | None:intergenic | 30.0% |
| !!! | TGTGTTTTTTGTTGTGAATG+TGG | + | chr2_2:44326349-44326368 | None:intergenic | 30.0% |
| GATAGGGACATAAATTGAAA+AGG | + | chr2_2:44326383-44326402 | None:intergenic | 30.0% | |
| AGTTTGTATAGAAGTGATGA+GGG | + | chr2_2:44326433-44326452 | None:intergenic | 30.0% | |
| ! | TAGTTTGTATAGAAGTGATG+AGG | + | chr2_2:44326434-44326453 | None:intergenic | 30.0% |
| ! | TGTAAAATGGGATTTTATGG+TGG | - | chr2_2:44326662-44326681 | Msa0252770:intron | 30.0% |
| TTTGTAGAAGATCAATGTTG+TGG | - | chr2_2:44326746-44326765 | Msa0252770:intron | 30.0% | |
| ! | CAATTTTCTCTTGCAACATT+AGG | + | chr2_2:44326806-44326825 | None:intergenic | 30.0% |
| CTAATGTTGCAAGAGAAAAT+TGG | - | chr2_2:44326804-44326823 | Msa0252770:intron | 30.0% | |
| !!! | GTCAAAGTGTTATTTTACCA+TGG | - | chr2_2:44326872-44326891 | Msa0252770:intron | 30.0% |
| TACTTGATCAAGAAAAACCA+TGG | + | chr2_2:44326892-44326911 | None:intergenic | 30.0% | |
| ! | GTTTTTCTTGATCAAGTACA+TGG | - | chr2_2:44326894-44326913 | Msa0252770:intron | 30.0% |
| GTGTTGCGACAATAATATAA+AGG | + | chr2_2:44326963-44326982 | None:intergenic | 30.0% | |
| ! | TTATTGTCGCAACACAATTT+TGG | - | chr2_2:44326968-44326987 | Msa0252770:intron | 30.0% |
| ! | TGCTTTTCTTAAGATGTCAA+GGG | + | chr2_2:44327107-44327126 | None:intergenic | 30.0% |
| !! | TTGCTTTTCTTAAGATGTCA+AGG | + | chr2_2:44327108-44327127 | None:intergenic | 30.0% |
| AAACTTCAACAAAACCATCA+AGG | - | chr2_2:44327450-44327469 | Msa0252770:CDS | 30.0% | |
| !!! | ATGATTCTCAAGCTTTTTTG+TGG | + | chr2_2:44327668-44327687 | None:intergenic | 30.0% |
| CTTAAATCATGAAAGTTACC+TGG | + | chr2_2:44327738-44327757 | None:intergenic | 30.0% | |
| CAGGTAACTTTCATGATTTA+AGG | - | chr2_2:44327736-44327755 | Msa0252770:intron | 30.0% | |
| GGGAATTATAGTTAAGTACT+TGG | + | chr2_2:44327856-44327875 | None:intergenic | 30.0% | |
| ! | TAAACAGTTTTTATAGTCGG+AGG | + | chr2_2:44327996-44328015 | None:intergenic | 30.0% |
| ! | AAAAGTGCACATATGAATGA+TGG | - | chr2_2:44328066-44328085 | Msa0252770:CDS | 30.0% |
| ! | TCATCTCTAATTTTATGGAG+TGG | + | chr2_2:44328176-44328195 | None:intergenic | 30.0% |
| TGATTACTATATGTAGCTCT+TGG | - | chr2_2:44328429-44328448 | Msa0252770:CDS | 30.0% | |
| AGATGTAAACTCTAATTGCA+TGG | - | chr2_2:44328592-44328611 | Msa0252770:five_prime_UTR | 30.0% | |
| !!! | TTTGTGTTTGGTTTTTGGTT+TGG | + | chr2_2:44326249-44326268 | None:intergenic | 30.0% |
| !!! | TTGTGTTTGTGTTTGGTTTT+TGG | + | chr2_2:44326254-44326273 | None:intergenic | 30.0% |
| GATATGTTTGTGTTTGTGTT+TGG | + | chr2_2:44326261-44326280 | None:intergenic | 30.0% | |
| !!! | TTGTGTTTGGTTTTTTGGTT+TGG | + | chr2_2:44326316-44326335 | None:intergenic | 30.0% |
| !!! | TTTTTTGTTGTGAATGTGGA+GGG | + | chr2_2:44326345-44326364 | None:intergenic | 30.0% |
| !!! | TGTGTTTTTTGTTGTGAATG+TGG | + | chr2_2:44326349-44326368 | None:intergenic | 30.0% |
| GATAGGGACATAAATTGAAA+AGG | + | chr2_2:44326383-44326402 | None:intergenic | 30.0% | |
| AGTTTGTATAGAAGTGATGA+GGG | + | chr2_2:44326433-44326452 | None:intergenic | 30.0% | |
| ! | TAGTTTGTATAGAAGTGATG+AGG | + | chr2_2:44326434-44326453 | None:intergenic | 30.0% |
| ! | TGTAAAATGGGATTTTATGG+TGG | - | chr2_2:44326662-44326681 | Msa0252770:intron | 30.0% |
| TTTGTAGAAGATCAATGTTG+TGG | - | chr2_2:44326746-44326765 | Msa0252770:intron | 30.0% | |
| ! | CAATTTTCTCTTGCAACATT+AGG | + | chr2_2:44326806-44326825 | None:intergenic | 30.0% |
| CTAATGTTGCAAGAGAAAAT+TGG | - | chr2_2:44326804-44326823 | Msa0252770:intron | 30.0% | |
| !!! | GTCAAAGTGTTATTTTACCA+TGG | - | chr2_2:44326872-44326891 | Msa0252770:intron | 30.0% |
| TACTTGATCAAGAAAAACCA+TGG | + | chr2_2:44326892-44326911 | None:intergenic | 30.0% | |
| ! | GTTTTTCTTGATCAAGTACA+TGG | - | chr2_2:44326894-44326913 | Msa0252770:intron | 30.0% |
| GTGTTGCGACAATAATATAA+AGG | + | chr2_2:44326963-44326982 | None:intergenic | 30.0% | |
| ! | TTATTGTCGCAACACAATTT+TGG | - | chr2_2:44326968-44326987 | Msa0252770:intron | 30.0% |
| ! | TGCTTTTCTTAAGATGTCAA+GGG | + | chr2_2:44327107-44327126 | None:intergenic | 30.0% |
| !! | TTGCTTTTCTTAAGATGTCA+AGG | + | chr2_2:44327108-44327127 | None:intergenic | 30.0% |
| AAACTTCAACAAAACCATCA+AGG | - | chr2_2:44327450-44327469 | Msa0252770:CDS | 30.0% | |
| !!! | ATGATTCTCAAGCTTTTTTG+TGG | + | chr2_2:44327668-44327687 | None:intergenic | 30.0% |
| CTTAAATCATGAAAGTTACC+TGG | + | chr2_2:44327738-44327757 | None:intergenic | 30.0% | |
| CAGGTAACTTTCATGATTTA+AGG | - | chr2_2:44327736-44327755 | Msa0252770:intron | 30.0% | |
| GGGAATTATAGTTAAGTACT+TGG | + | chr2_2:44327856-44327875 | None:intergenic | 30.0% | |
| ! | TAAACAGTTTTTATAGTCGG+AGG | + | chr2_2:44327996-44328015 | None:intergenic | 30.0% |
| ! | AAAAGTGCACATATGAATGA+TGG | - | chr2_2:44328066-44328085 | Msa0252770:CDS | 30.0% |
| ! | TCATCTCTAATTTTATGGAG+TGG | + | chr2_2:44328176-44328195 | None:intergenic | 30.0% |
| TGATTACTATATGTAGCTCT+TGG | - | chr2_2:44328429-44328448 | Msa0252770:CDS | 30.0% | |
| AGATGTAAACTCTAATTGCA+TGG | - | chr2_2:44328592-44328611 | Msa0252770:five_prime_UTR | 30.0% | |
| !!! | GTTTTTTGTTGTGAATGTGG+AGG | + | chr2_2:44326346-44326365 | None:intergenic | 35.0% |
| ! | AGGGTTTTCTTCAACAATGA+TGG | - | chr2_2:44326478-44326497 | Msa0252770:exon | 35.0% |
| ! | TGATGGACAATACTATGATG+TGG | - | chr2_2:44326495-44326514 | Msa0252770:CDS | 35.0% |
| GATGGACAATACTATGATGT+GGG | - | chr2_2:44326496-44326515 | Msa0252770:CDS | 35.0% | |
| ATGGACAATACTATGATGTG+GGG | - | chr2_2:44326497-44326516 | Msa0252770:CDS | 35.0% | |
| ATGCCTGTTTACGAAAATCA+TGG | - | chr2_2:44326536-44326555 | Msa0252770:CDS | 35.0% | |
| TCTTGTTGCTCAACCAAATT+CGG | + | chr2_2:44326614-44326633 | None:intergenic | 35.0% | |
| ! | AAAATGGGATTTTATGGTGG+AGG | - | chr2_2:44326665-44326684 | Msa0252770:intron | 35.0% |
| !! | AAATGGGATTTTATGGTGGA+GGG | - | chr2_2:44326666-44326685 | Msa0252770:intron | 35.0% |
| AGAAGATCAATGTTGTGGTT+TGG | - | chr2_2:44326751-44326770 | Msa0252770:intron | 35.0% | |
| ACATTAGGATAAGTTGTAGG+TGG | + | chr2_2:44326791-44326810 | None:intergenic | 35.0% | |
| GCAACATTAGGATAAGTTGT+AGG | + | chr2_2:44326794-44326813 | None:intergenic | 35.0% | |
| !!! | ACATGGTTTTGAATTGCCAT+TGG | - | chr2_2:44326911-44326930 | Msa0252770:intron | 35.0% |
| AATTAATTGCAGGGGATTCA+AGG | - | chr2_2:44327322-44327341 | Msa0252770:intron | 35.0% | |
| AGTTGAAGAGCCAAACATAA+AGG | - | chr2_2:44327360-44327379 | Msa0252770:intron | 35.0% | |
| TACCTTCCTACCTTTATGTT+TGG | + | chr2_2:44327373-44327392 | None:intergenic | 35.0% | |
| TGATAGAAGAGTAAGAGTGA+GGG | - | chr2_2:44327597-44327616 | Msa0252770:intron | 35.0% | |
| GCAGTTAAAGAATGAAGAAG+AGG | - | chr2_2:44328301-44328320 | Msa0252770:CDS | 35.0% | |
| TAAAGAATGAAGAAGAGGAC+TGG | - | chr2_2:44328306-44328325 | Msa0252770:CDS | 35.0% | |
| TAAATAGACCAAACTTGCCA+TGG | + | chr2_2:44328342-44328361 | None:intergenic | 35.0% | |
| ! | CATATCATCTGGTGATGAAT+GGG | + | chr2_2:44328366-44328385 | None:intergenic | 35.0% |
| ! | ACATATCATCTGGTGATGAA+TGG | + | chr2_2:44328367-44328386 | None:intergenic | 35.0% |
| ATTAAGCTAGCTAGTGTGAA+AGG | - | chr2_2:44328476-44328495 | Msa0252770:five_prime_UTR | 35.0% | |
| !!! | GTTTTTTGTTGTGAATGTGG+AGG | + | chr2_2:44326346-44326365 | None:intergenic | 35.0% |
| ! | AGGGTTTTCTTCAACAATGA+TGG | - | chr2_2:44326478-44326497 | Msa0252770:exon | 35.0% |
| ! | TGATGGACAATACTATGATG+TGG | - | chr2_2:44326495-44326514 | Msa0252770:CDS | 35.0% |
| GATGGACAATACTATGATGT+GGG | - | chr2_2:44326496-44326515 | Msa0252770:CDS | 35.0% | |
| ATGGACAATACTATGATGTG+GGG | - | chr2_2:44326497-44326516 | Msa0252770:CDS | 35.0% | |
| ATGCCTGTTTACGAAAATCA+TGG | - | chr2_2:44326536-44326555 | Msa0252770:CDS | 35.0% | |
| TCTTGTTGCTCAACCAAATT+CGG | + | chr2_2:44326614-44326633 | None:intergenic | 35.0% | |
| ! | AAAATGGGATTTTATGGTGG+AGG | - | chr2_2:44326665-44326684 | Msa0252770:intron | 35.0% |
| !! | AAATGGGATTTTATGGTGGA+GGG | - | chr2_2:44326666-44326685 | Msa0252770:intron | 35.0% |
| AGAAGATCAATGTTGTGGTT+TGG | - | chr2_2:44326751-44326770 | Msa0252770:intron | 35.0% | |
| ACATTAGGATAAGTTGTAGG+TGG | + | chr2_2:44326791-44326810 | None:intergenic | 35.0% | |
| GCAACATTAGGATAAGTTGT+AGG | + | chr2_2:44326794-44326813 | None:intergenic | 35.0% | |
| !!! | ACATGGTTTTGAATTGCCAT+TGG | - | chr2_2:44326911-44326930 | Msa0252770:intron | 35.0% |
| AATTAATTGCAGGGGATTCA+AGG | - | chr2_2:44327322-44327341 | Msa0252770:intron | 35.0% | |
| AGTTGAAGAGCCAAACATAA+AGG | - | chr2_2:44327360-44327379 | Msa0252770:intron | 35.0% | |
| TACCTTCCTACCTTTATGTT+TGG | + | chr2_2:44327373-44327392 | None:intergenic | 35.0% | |
| TGATAGAAGAGTAAGAGTGA+GGG | - | chr2_2:44327597-44327616 | Msa0252770:intron | 35.0% | |
| GCAGTTAAAGAATGAAGAAG+AGG | - | chr2_2:44328301-44328320 | Msa0252770:CDS | 35.0% | |
| TAAAGAATGAAGAAGAGGAC+TGG | - | chr2_2:44328306-44328325 | Msa0252770:CDS | 35.0% | |
| TAAATAGACCAAACTTGCCA+TGG | + | chr2_2:44328342-44328361 | None:intergenic | 35.0% | |
| ! | CATATCATCTGGTGATGAAT+GGG | + | chr2_2:44328366-44328385 | None:intergenic | 35.0% |
| ! | ACATATCATCTGGTGATGAA+TGG | + | chr2_2:44328367-44328386 | None:intergenic | 35.0% |
| ATTAAGCTAGCTAGTGTGAA+AGG | - | chr2_2:44328476-44328495 | Msa0252770:five_prime_UTR | 35.0% | |
| TGGAGGGATATGTTTGTGTT+TGG | + | chr2_2:44326329-44326348 | None:intergenic | 40.0% | |
| AGCCATGAATGAAGGAGATA+GGG | + | chr2_2:44326399-44326418 | None:intergenic | 40.0% | |
| AAGCCATGAATGAAGGAGAT+AGG | + | chr2_2:44326400-44326419 | None:intergenic | 40.0% | |
| TGTATAGAAGTGATGAGGGA+TGG | + | chr2_2:44326429-44326448 | None:intergenic | 40.0% | |
| TCTGATTTCACCACACAACA+AGG | - | chr2_2:44326458-44326477 | Msa0252770:three_prime_UTR | 40.0% | |
| CTGATTTCACCACACAACAA+GGG | - | chr2_2:44326459-44326478 | Msa0252770:three_prime_UTR | 40.0% | |
| ! | TGAAGAAAACCCTTGTTGTG+TGG | + | chr2_2:44326471-44326490 | None:intergenic | 40.0% |
| ! | GCTCCATGATTTTCGTAAAC+AGG | + | chr2_2:44326542-44326561 | None:intergenic | 40.0% |
| GTCACTTGATTGTGATGCTT+CGG | - | chr2_2:44326577-44326596 | Msa0252770:intron | 40.0% | |
| GGAGGGTTTCAGAATTTCAA+TGG | - | chr2_2:44326683-44326702 | Msa0252770:intron | 40.0% | |
| AATTGCAAAAGCGACTCCAA+TGG | + | chr2_2:44326930-44326949 | None:intergenic | 40.0% | |
| GAAGAGCCAAACATAAAGGT+AGG | - | chr2_2:44327364-44327383 | Msa0252770:intron | 40.0% | |
| AGCCAAACATAAAGGTAGGA+AGG | - | chr2_2:44327368-44327387 | Msa0252770:intron | 40.0% | |
| !! | GAAGGTACTCAGAAGAAGAA+AGG | - | chr2_2:44327386-44327405 | Msa0252770:intron | 40.0% |
| CTGATAGAAGAGTAAGAGTG+AGG | - | chr2_2:44327596-44327615 | Msa0252770:intron | 40.0% | |
| GATAGAAGAGTAAGAGTGAG+GGG | - | chr2_2:44327598-44327617 | Msa0252770:intron | 40.0% | |
| GACATGTGAAGAAGATCACA+TGG | - | chr2_2:44327642-44327661 | Msa0252770:intron | 40.0% | |
| !! | TGCTGATTCATTTCAGTTCC+AGG | - | chr2_2:44327717-44327736 | Msa0252770:intron | 40.0% |
| TATATGTAGCTCTTGGAGCA+TGG | - | chr2_2:44328436-44328455 | Msa0252770:CDS | 40.0% | |
| AGCTAGTGTGAAAGGTGAAT+AGG | - | chr2_2:44328484-44328503 | Msa0252770:five_prime_UTR | 40.0% | |
| TGGAGGGATATGTTTGTGTT+TGG | + | chr2_2:44326329-44326348 | None:intergenic | 40.0% | |
| AGCCATGAATGAAGGAGATA+GGG | + | chr2_2:44326399-44326418 | None:intergenic | 40.0% | |
| AAGCCATGAATGAAGGAGAT+AGG | + | chr2_2:44326400-44326419 | None:intergenic | 40.0% | |
| TGTATAGAAGTGATGAGGGA+TGG | + | chr2_2:44326429-44326448 | None:intergenic | 40.0% | |
| TCTGATTTCACCACACAACA+AGG | - | chr2_2:44326458-44326477 | Msa0252770:three_prime_UTR | 40.0% | |
| CTGATTTCACCACACAACAA+GGG | - | chr2_2:44326459-44326478 | Msa0252770:three_prime_UTR | 40.0% | |
| ! | TGAAGAAAACCCTTGTTGTG+TGG | + | chr2_2:44326471-44326490 | None:intergenic | 40.0% |
| ! | GCTCCATGATTTTCGTAAAC+AGG | + | chr2_2:44326542-44326561 | None:intergenic | 40.0% |
| GTCACTTGATTGTGATGCTT+CGG | - | chr2_2:44326577-44326596 | Msa0252770:intron | 40.0% | |
| GGAGGGTTTCAGAATTTCAA+TGG | - | chr2_2:44326683-44326702 | Msa0252770:intron | 40.0% | |
| AATTGCAAAAGCGACTCCAA+TGG | + | chr2_2:44326930-44326949 | None:intergenic | 40.0% | |
| GAAGAGCCAAACATAAAGGT+AGG | - | chr2_2:44327364-44327383 | Msa0252770:intron | 40.0% | |
| AGCCAAACATAAAGGTAGGA+AGG | - | chr2_2:44327368-44327387 | Msa0252770:intron | 40.0% | |
| !! | GAAGGTACTCAGAAGAAGAA+AGG | - | chr2_2:44327386-44327405 | Msa0252770:intron | 40.0% |
| CTGATAGAAGAGTAAGAGTG+AGG | - | chr2_2:44327596-44327615 | Msa0252770:intron | 40.0% | |
| GATAGAAGAGTAAGAGTGAG+GGG | - | chr2_2:44327598-44327617 | Msa0252770:intron | 40.0% | |
| GACATGTGAAGAAGATCACA+TGG | - | chr2_2:44327642-44327661 | Msa0252770:intron | 40.0% | |
| !! | TGCTGATTCATTTCAGTTCC+AGG | - | chr2_2:44327717-44327736 | Msa0252770:intron | 40.0% |
| TATATGTAGCTCTTGGAGCA+TGG | - | chr2_2:44328436-44328455 | Msa0252770:CDS | 40.0% | |
| AGCTAGTGTGAAAGGTGAAT+AGG | - | chr2_2:44328484-44328503 | Msa0252770:five_prime_UTR | 40.0% | |
| GTCCCTATCTCCTTCATTCA+TGG | - | chr2_2:44326394-44326413 | Msa0252770:three_prime_UTR | 45.0% | |
| GTGGAAGAAGCCATGAATGA+AGG | + | chr2_2:44326407-44326426 | None:intergenic | 45.0% | |
| ATAGAAGTGATGAGGGATGG+TGG | + | chr2_2:44326426-44326445 | None:intergenic | 45.0% | |
| ATTGTGATGCTTCGGCTTCT+TGG | - | chr2_2:44326585-44326604 | Msa0252770:intron | 45.0% | |
| GGCTTCTTGGATTCCGAATT+TGG | - | chr2_2:44326598-44326617 | Msa0252770:intron | 45.0% | |
| GCAACAAGATTTCGCTGTTC+CGG | - | chr2_2:44326625-44326644 | Msa0252770:intron | 45.0% | |
| GTCCCTATCTCCTTCATTCA+TGG | - | chr2_2:44326394-44326413 | Msa0252770:three_prime_UTR | 45.0% | |
| GTGGAAGAAGCCATGAATGA+AGG | + | chr2_2:44326407-44326426 | None:intergenic | 45.0% | |
| ATAGAAGTGATGAGGGATGG+TGG | + | chr2_2:44326426-44326445 | None:intergenic | 45.0% | |
| ATTGTGATGCTTCGGCTTCT+TGG | - | chr2_2:44326585-44326604 | Msa0252770:intron | 45.0% | |
| GGCTTCTTGGATTCCGAATT+TGG | - | chr2_2:44326598-44326617 | Msa0252770:intron | 45.0% | |
| GCAACAAGATTTCGCTGTTC+CGG | - | chr2_2:44326625-44326644 | Msa0252770:intron | 45.0% | |
| !!! | TTTTATTTTTAAAAATTCAT+AGG | - | chr2_2:44327080-44327099 | Msa0252770:intron | 5.0% |
| !!! | TTTAATATTAATTTGATTTT+TGG | + | chr2_2:44327936-44327955 | None:intergenic | 5.0% |
| !!! | CAAATTAATATTAAATTTTA+AGG | - | chr2_2:44327941-44327960 | Msa0252770:intron | 5.0% |
| !!! | TTTTATTTTTAAAAATTCAT+AGG | - | chr2_2:44327080-44327099 | Msa0252770:intron | 5.0% |
| !!! | TTTAATATTAATTTGATTTT+TGG | + | chr2_2:44327936-44327955 | None:intergenic | 5.0% |
| !!! | CAAATTAATATTAAATTTTA+AGG | - | chr2_2:44327941-44327960 | Msa0252770:intron | 5.0% |
| GAAGAGTAAGAGTGAGGGGA+AGG | - | chr2_2:44327602-44327621 | Msa0252770:intron | 50.0% | |
| !! | AGAAGAGGACTGGCTTCAAG+AGG | - | chr2_2:44328316-44328335 | Msa0252770:CDS | 50.0% |
| TCAAGAGGCCATGGCAAGTT+TGG | - | chr2_2:44328331-44328350 | Msa0252770:CDS | 50.0% | |
| TTGGAGCATGGCTTCTCACA+AGG | - | chr2_2:44328448-44328467 | Msa0252770:CDS | 50.0% | |
| GAAGAGTAAGAGTGAGGGGA+AGG | - | chr2_2:44327602-44327621 | Msa0252770:intron | 50.0% | |
| !! | AGAAGAGGACTGGCTTCAAG+AGG | - | chr2_2:44328316-44328335 | Msa0252770:CDS | 50.0% |
| TCAAGAGGCCATGGCAAGTT+TGG | - | chr2_2:44328331-44328350 | Msa0252770:CDS | 50.0% | |
| TTGGAGCATGGCTTCTCACA+AGG | - | chr2_2:44328448-44328467 | Msa0252770:CDS | 50.0% | |
| !! | GGACTGGCTTCAAGAGGCCA+TGG | - | chr2_2:44328322-44328341 | Msa0252770:CDS | 60.0% |
| !! | GGACTGGCTTCAAGAGGCCA+TGG | - | chr2_2:44328322-44328341 | Msa0252770:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 44326239 | 44328628 | 44326239 | ID=Msa0252770;Name=Msa0252770 |
| chr2_2 | mRNA | 44326239 | 44328628 | 44326239 | ID=Msa0252770-mRNA-1;Parent=Msa0252770;Name=Msa0252770-mRNA-1;_AED=0.04;_eAED=0.04;_QI=153|1|1|1|1|1|4|240|273 |
| chr2_2 | exon | 44326239 | 44326562 | 44326239 | ID=Msa0252770-mRNA-1:exon:13623;Parent=Msa0252770-mRNA-1 |
| chr2_2 | exon | 44327129 | 44327293 | 44327129 | ID=Msa0252770-mRNA-1:exon:13622;Parent=Msa0252770-mRNA-1 |
| chr2_2 | exon | 44327396 | 44327533 | 44327396 | ID=Msa0252770-mRNA-1:exon:13621;Parent=Msa0252770-mRNA-1 |
| chr2_2 | exon | 44328041 | 44328628 | 44328041 | ID=Msa0252770-mRNA-1:exon:13620;Parent=Msa0252770-mRNA-1 |
| chr2_2 | five_prime_UTR | 44328476 | 44328628 | 44328476 | ID=Msa0252770-mRNA-1:five_prime_utr;Parent=Msa0252770-mRNA-1 |
| chr2_2 | CDS | 44328041 | 44328475 | 44328041 | ID=Msa0252770-mRNA-1:cds;Parent=Msa0252770-mRNA-1 |
| chr2_2 | CDS | 44327396 | 44327533 | 44327396 | ID=Msa0252770-mRNA-1:cds;Parent=Msa0252770-mRNA-1 |
| chr2_2 | CDS | 44327129 | 44327293 | 44327129 | ID=Msa0252770-mRNA-1:cds;Parent=Msa0252770-mRNA-1 |
| chr2_2 | CDS | 44326479 | 44326562 | 44326479 | ID=Msa0252770-mRNA-1:cds;Parent=Msa0252770-mRNA-1 |
| chr2_2 | three_prime_UTR | 44326239 | 44326478 | 44326239 | ID=Msa0252770-mRNA-1:three_prime_utr;Parent=Msa0252770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
