Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860280 | XP_024639777.1 | 98.328 | 299 | 0 | 2 | 1 | 295 | 1 | 298 | 0.0 | 608 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860280 | sp|P46608|HSBH1_SOYBN | 66.284 | 261 | 72 | 7 | 46 | 294 | 123 | 379 | 1.77e-108 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860280 | A5Y4H1 | 98.328 | 299 | 0 | 2 | 1 | 295 | 15 | 312 | 0.0 | 608 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0860280 | TF | HB-KNOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006980 | Msa0860280 | 0.851751 | 7.238474e-61 | -8.615850e-47 |
| Msa0015710 | Msa0860280 | 0.861993 | 6.942092e-64 | -8.615850e-47 |
| Msa0016120 | Msa0860280 | 0.846541 | 2.036477e-59 | -8.615850e-47 |
| Msa0019600 | Msa0860280 | 0.850759 | 1.379193e-60 | -8.615850e-47 |
| Msa0050040 | Msa0860280 | 0.806661 | 7.381063e-50 | -8.615850e-47 |
| Msa0055450 | Msa0860280 | 0.848927 | 4.486441e-60 | -8.615850e-47 |
| Msa0080990 | Msa0860280 | 0.823536 | 1.313669e-53 | -8.615850e-47 |
| Msa0102990 | Msa0860280 | 0.805399 | 1.360390e-49 | -8.615850e-47 |
| Msa0109880 | Msa0860280 | 0.862022 | 6.801033e-64 | -8.615850e-47 |
| Msa0111750 | Msa0860280 | 0.822182 | 2.716015e-53 | -8.615850e-47 |
| Msa0641250 | Msa0860280 | 0.842560 | 2.399671e-58 | -8.615850e-47 |
| Msa0641360 | Msa0860280 | 0.815055 | 1.124368e-51 | -8.615850e-47 |
| Msa0669840 | Msa0860280 | 0.900594 | 6.268298e-78 | -8.615850e-47 |
| Msa0679830 | Msa0860280 | 0.811011 | 8.665361e-51 | -8.615850e-47 |
| Msa0709450 | Msa0860280 | 0.807710 | 4.426067e-50 | -8.615850e-47 |
| Msa0711320 | Msa0860280 | 0.805156 | 1.529139e-49 | -8.615850e-47 |
| Msa0725860 | Msa0860280 | 0.822205 | 2.683268e-53 | -8.615850e-47 |
| Msa0737190 | Msa0860280 | 0.806653 | 7.409821e-50 | -8.615850e-47 |
| Msa0739580 | Msa0860280 | 0.961390 | 1.202851e-119 | -8.615850e-47 |
| Msa0748000 | Msa0860280 | 0.822989 | 1.763242e-53 | -8.615850e-47 |
| Msa0751890 | Msa0860280 | 0.803893 | 2.805414e-49 | -8.615850e-47 |
| Msa0752840 | Msa0860280 | 0.827542 | 1.477464e-54 | -8.615850e-47 |
| Msa0770290 | Msa0860280 | 0.832788 | 7.739958e-56 | -8.615850e-47 |
| Msa0782230 | Msa0860280 | 0.812624 | 3.861436e-51 | -8.615850e-47 |
| Msa0782360 | Msa0860280 | 0.978657 | 2.761316e-146 | -8.615850e-47 |
| Msa0819890 | Msa0860280 | 0.858596 | 7.390413e-63 | -8.615850e-47 |
| Msa0823400 | Msa0860280 | 0.801096 | 1.057636e-48 | -8.615850e-47 |
| Msa0828830 | Msa0860280 | 0.873521 | 1.378291e-67 | -8.615850e-47 |
| Msa0831940 | Msa0860280 | 0.806842 | 6.758941e-50 | -8.615850e-47 |
| Msa0124130 | Msa0860280 | 0.873287 | 1.652572e-67 | -8.615850e-47 |
| Msa0141120 | Msa0860280 | 0.835601 | 1.525766e-56 | -8.615850e-47 |
| Msa0149140 | Msa0860280 | 0.873270 | 1.674736e-67 | -8.615850e-47 |
| Msa0152480 | Msa0860280 | 0.802590 | 5.218543e-49 | -8.615850e-47 |
| Msa0152500 | Msa0860280 | 0.832735 | 7.976246e-56 | -8.615850e-47 |
| Msa0156250 | Msa0860280 | 0.877267 | 7.206200e-69 | -8.615850e-47 |
| Msa0185490 | Msa0860280 | 0.834037 | 3.777079e-56 | -8.615850e-47 |
| Msa0197100 | Msa0860280 | 0.892572 | 1.402246e-74 | -8.615850e-47 |
| Msa0212080 | Msa0860280 | 0.817547 | 3.116329e-52 | -8.615850e-47 |
| Msa0212150 | Msa0860280 | 0.914580 | 1.622982e-84 | -8.615850e-47 |
| Msa0215640 | Msa0860280 | 0.822805 | 1.946471e-53 | -8.615850e-47 |
| Msa0221290 | Msa0860280 | 0.828230 | 1.009147e-54 | -8.615850e-47 |
| Msa0373960 | Msa0860280 | 0.820872 | 5.453194e-53 | -8.615850e-47 |
| Msa0375680 | Msa0860280 | 0.859290 | 4.583145e-63 | -8.615850e-47 |
| Msa0375700 | Msa0860280 | 0.809102 | 2.233496e-50 | -8.615850e-47 |
| Msa0384910 | Msa0860280 | 0.826198 | 3.094215e-54 | -8.615850e-47 |
| Msa0385390 | Msa0860280 | 0.819558 | 1.090459e-52 | -8.615850e-47 |
| Msa0392420 | Msa0860280 | 0.823580 | 1.283452e-53 | -8.615850e-47 |
| Msa0392460 | Msa0860280 | 0.818276 | 2.132782e-52 | -8.615850e-47 |
| Msa0392490 | Msa0860280 | 0.806857 | 6.708531e-50 | -8.615850e-47 |
| Msa0406000 | Msa0860280 | 0.918976 | 8.000930e-87 | -8.615850e-47 |
| Msa0415320 | Msa0860280 | 0.821826 | 3.283430e-53 | -8.615850e-47 |
| Msa0424330 | Msa0860280 | 0.871033 | 9.298485e-67 | -8.615850e-47 |
| Msa0424340 | Msa0860280 | 0.860764 | 1.645198e-63 | -8.615850e-47 |
| Msa0424350 | Msa0860280 | 0.859630 | 3.621734e-63 | -8.615850e-47 |
| Msa0451400 | Msa0860280 | 0.927997 | 5.376302e-92 | -8.615850e-47 |
| Msa0469260 | Msa0860280 | 0.806345 | 8.607179e-50 | -8.615850e-47 |
| Msa0471240 | Msa0860280 | 0.841809 | 3.794101e-58 | -8.615850e-47 |
| Msa0479540 | Msa0860280 | 0.802951 | 4.397133e-49 | -8.615850e-47 |
| Msa0239030 | Msa0860280 | 0.902837 | 6.438813e-79 | -8.615850e-47 |
| Msa0252630 | Msa0860280 | 0.825188 | 5.370206e-54 | -8.615850e-47 |
| Msa0252770 | Msa0860280 | 0.910601 | 1.561240e-82 | -8.615850e-47 |
| Msa0276740 | Msa0860280 | 0.880848 | 3.914964e-70 | -8.615850e-47 |
| Msa0289920 | Msa0860280 | 0.910275 | 2.246253e-82 | -8.615850e-47 |
| Msa0291330 | Msa0860280 | 0.800078 | 1.705664e-48 | -8.615850e-47 |
| Msa0298240 | Msa0860280 | 0.809455 | 1.876489e-50 | -8.615850e-47 |
| Msa0301580 | Msa0860280 | 0.805715 | 1.167918e-49 | -8.615850e-47 |
| Msa0306120 | Msa0860280 | 0.973342 | 2.884101e-136 | -8.615850e-47 |
| Msa0316680 | Msa0860280 | 0.886090 | 4.628713e-72 | -8.615850e-47 |
| Msa0322830 | Msa0860280 | 0.801190 | 1.012238e-48 | -8.615850e-47 |
| Msa0322840 | Msa0860280 | 0.847337 | 1.232365e-59 | -8.615850e-47 |
| Msa0322860 | Msa0860280 | 0.810196 | 1.299643e-50 | -8.615850e-47 |
| Msa0329620 | Msa0860280 | 0.905385 | 4.540313e-80 | -8.615850e-47 |
| Msa0333450 | Msa0860280 | 0.830787 | 2.411655e-55 | -8.615850e-47 |
| Msa0333700 | Msa0860280 | 0.826370 | 2.815737e-54 | -8.615850e-47 |
| Msa0340480 | Msa0860280 | 0.801778 | 7.667420e-49 | -8.615850e-47 |
| Msa0343660 | Msa0860280 | 0.850529 | 1.601212e-60 | -8.615850e-47 |
| Msa0359250 | Msa0860280 | 0.909163 | 7.713062e-82 | -8.615850e-47 |
| Msa0487570 | Msa0860280 | 0.828766 | 7.488625e-55 | -8.615850e-47 |
| Msa0487630 | Msa0860280 | 0.817157 | 3.813826e-52 | -8.615850e-47 |
| Msa0492190 | Msa0860280 | 0.901319 | 3.023103e-78 | -8.615850e-47 |
| Msa0515950 | Msa0860280 | 0.870554 | 1.336767e-66 | -8.615850e-47 |
| Msa0534930 | Msa0860280 | 0.850046 | 2.187571e-60 | -8.615850e-47 |
| Msa0535040 | Msa0860280 | 0.842556 | 2.405808e-58 | -8.615850e-47 |
| Msa0537920 | Msa0860280 | 0.829472 | 5.050031e-55 | -8.615850e-47 |
| Msa0538220 | Msa0860280 | 0.809039 | 2.303580e-50 | -8.615850e-47 |
| Msa0575740 | Msa0860280 | 0.813798 | 2.133182e-51 | -8.615850e-47 |
| Msa0591790 | Msa0860280 | 0.879272 | 1.426278e-69 | -8.615850e-47 |
| Msa0594090 | Msa0860280 | 0.882319 | 1.150867e-70 | -8.615850e-47 |
| Msa0849280 | Msa0860280 | 0.857717 | 1.349591e-62 | -8.615850e-47 |
| Msa0851020 | Msa0860280 | 0.861898 | 7.423045e-64 | -8.615850e-47 |
| Msa0860160 | Msa0860280 | 0.837709 | 4.428706e-57 | -8.615850e-47 |
| Msa0860280 | Msa0867350 | 0.871060 | 9.112988e-67 | -8.615850e-47 |
| Msa0860280 | Msa0898730 | 0.867464 | 1.342320e-65 | -8.615850e-47 |
| Msa0860280 | Msa0905970 | 0.801628 | 8.233089e-49 | -8.615850e-47 |
| Msa0860280 | Msa0911540 | 0.825209 | 5.309344e-54 | -8.615850e-47 |
| Msa0860280 | Msa0929870 | 0.833721 | 4.533508e-56 | -8.615850e-47 |
| Msa0860280 | Msa0941820 | 0.808731 | 2.681951e-50 | -8.615850e-47 |
| Msa0860280 | Msa0944760 | 0.843141 | 1.681396e-58 | -8.615850e-47 |
| Msa0860280 | Msa0944880 | 0.825454 | 4.646052e-54 | -8.615850e-47 |
| Msa0860280 | Msa0946210 | 0.802463 | 5.544491e-49 | -8.615850e-47 |
| Msa0860280 | Msa0953540 | 0.802994 | 4.307123e-49 | -8.615850e-47 |
| Msa0860280 | Msa0961560 | 0.828656 | 7.961600e-55 | -8.615850e-47 |
| Msa0860280 | Msa0964840 | 0.815193 | 1.047714e-51 | -8.615850e-47 |
| Msa0860280 | Msa0965310 | 0.816218 | 6.192976e-52 | -8.615850e-47 |
| Msa0860280 | Msa0996270 | 0.814753 | 1.312113e-51 | -8.615850e-47 |
| Msa0860280 | Msa0999300 | 0.864232 | 1.409918e-64 | -8.615850e-47 |
| Msa0860280 | Msa0999320 | 0.827851 | 1.244891e-54 | -8.615850e-47 |
| Msa0860280 | Msa0999340 | 0.808225 | 3.438888e-50 | -8.615850e-47 |
| Msa0860280 | Msa0999350 | 0.832798 | 7.697705e-56 | -8.615850e-47 |
| Msa0860280 | Msa0999360 | 0.838532 | 2.719268e-57 | -8.615850e-47 |
| Msa0860280 | Msa0999390 | 0.802459 | 5.554537e-49 | -8.615850e-47 |
| Msa0860280 | Msa0999400 | 0.824371 | 8.370181e-54 | -8.615850e-47 |
| Msa0860280 | Msa0999410 | 0.842258 | 2.885504e-58 | -8.615850e-47 |
| Msa0860280 | Msa1001870 | 0.829049 | 6.396431e-55 | -8.615850e-47 |
| Msa0860280 | Msa1001890 | 0.841634 | 4.219069e-58 | -8.615850e-47 |
| Msa0860280 | Msa1005360 | 0.800385 | 1.477602e-48 | -8.615850e-47 |
| Msa0860280 | Msa1010840 | 0.838118 | 3.475997e-57 | -8.615850e-47 |
| Msa0860280 | Msa1034680 | 0.827222 | 1.762197e-54 | -8.615850e-47 |
| Msa0860280 | Msa1037770 | 0.850531 | 1.598849e-60 | -8.615850e-47 |
| Msa0860280 | Msa1037890 | 0.833156 | 6.267997e-56 | -8.615850e-47 |
| Msa0860280 | Msa1037900 | 0.842814 | 2.054777e-58 | -8.615850e-47 |
| Msa0860280 | Msa1037910 | 0.838350 | 3.029498e-57 | -8.615850e-47 |
| Msa0860280 | Msa1041530 | 0.801452 | 8.944092e-49 | -8.615850e-47 |
| Msa0860280 | Msa1047990 | 0.833416 | 5.400276e-56 | -8.615850e-47 |
| Msa0860280 | Msa1052360 | 0.826785 | 2.241441e-54 | -8.615850e-47 |
| Msa0860280 | Msa1081570 | 0.836006 | 1.204700e-56 | -8.615850e-47 |
| Msa0860280 | Msa1084520 | 0.837976 | 3.781045e-57 | -8.615850e-47 |
| Msa0860280 | Msa1092020 | 0.847484 | 1.122954e-59 | -8.615850e-47 |
| Msa0860280 | Msa1096210 | 0.849126 | 3.948952e-60 | -8.615850e-47 |
| Msa0860280 | Msa1125810 | 0.810953 | 8.920153e-51 | -8.615850e-47 |
| Msa0860280 | Msa1127140 | 0.824141 | 9.478353e-54 | -8.615850e-47 |
| Msa0860280 | Msa1129960 | 0.838063 | 3.593051e-57 | -8.615850e-47 |
| Msa0860280 | Msa1129970 | 0.834746 | 2.507248e-56 | -8.615850e-47 |
| Msa0860280 | Msa1130010 | 0.824613 | 7.341221e-54 | -8.615850e-47 |
| Msa0860280 | Msa1135380 | 0.846848 | 1.677737e-59 | -8.615850e-47 |
| Msa0860280 | Msa1140640 | 0.834108 | 3.627153e-56 | -8.615850e-47 |
| Msa0860280 | Msa1145020 | 0.824739 | 6.854901e-54 | -8.615850e-47 |
| Msa0860280 | Msa1166400 | 0.821616 | 3.672272e-53 | -8.615850e-47 |
| Msa0860280 | Msa1171310 | 0.823269 | 1.516955e-53 | -8.615850e-47 |
| Msa0860280 | Msa1176160 | 0.822986 | 1.765565e-53 | -8.615850e-47 |
| Msa0860280 | Msa1179280 | 0.816545 | 5.232131e-52 | -8.615850e-47 |
| Msa0860280 | Msa1200440 | 0.813924 | 2.000834e-51 | -8.615850e-47 |
| Msa0860280 | Msa1201110 | 0.843811 | 1.113969e-58 | -8.615850e-47 |
| Msa0860280 | Msa1201160 | 0.860659 | 1.770646e-63 | -8.615850e-47 |
| Msa0860280 | Msa1228190 | 0.877670 | 5.218085e-69 | -8.615850e-47 |
| Msa0860280 | Msa1233560 | 0.849129 | 3.942953e-60 | -8.615850e-47 |
| Msa0860280 | Msa1271260 | 0.860856 | 1.543110e-63 | -8.615850e-47 |
| Msa0860280 | Msa1277400 | 0.818813 | 1.611482e-52 | -8.615850e-47 |
| Msa0860280 | Msa1294290 | 0.849135 | 3.926217e-60 | -8.615850e-47 |
| Msa0860280 | Msa1305310 | 0.807401 | 5.147094e-50 | -8.615850e-47 |
| Msa0860280 | Msa1305510 | 0.875058 | 4.154654e-68 | -8.615850e-47 |
| Msa0860280 | Msa1307150 | 0.805068 | 1.595524e-49 | -8.615850e-47 |
| Msa0860280 | Msa1307190 | 0.819486 | 1.132426e-52 | -8.615850e-47 |
| Msa0860280 | Msa1313970 | 0.827913 | 1.202912e-54 | -8.615850e-47 |
| Msa0860280 | Msa1316540 | 0.813670 | 2.275968e-51 | -8.615850e-47 |
| Msa0860280 | Msa1326630 | 0.802051 | 6.740114e-49 | -8.615850e-47 |
| Msa0860280 | Msa1356990 | 0.817207 | 3.717206e-52 | -8.615850e-47 |
| Msa0860280 | Msa1374550 | 0.800188 | 1.620369e-48 | -8.615850e-47 |
| Msa0860280 | Msa1378870 | 0.809428 | 1.901891e-50 | -8.615850e-47 |
| Msa0860280 | Msa1379970 | 0.884137 | 2.477858e-71 | -8.615850e-47 |
| Msa0860280 | Msa1394890 | 0.871096 | 8.864079e-67 | -8.615850e-47 |
| Msa0860280 | Msa1406780 | 0.942732 | 4.264540e-102 | -8.615850e-47 |
| Msa0860280 | Msa1420060 | 0.807526 | 4.842292e-50 | -8.615850e-47 |
| Msa0860280 | Msa1421550 | 0.867823 | 1.030158e-65 | -8.615850e-47 |
| Msa0860280 | Msa1423460 | 0.836549 | 8.769404e-57 | -8.615850e-47 |
| Msa0860280 | Msa1431850 | 0.938982 | 2.727549e-99 | -8.615850e-47 |
| Msa0860280 | Msa1435480 | 0.824841 | 6.488080e-54 | -8.615850e-47 |
| Msa0860280 | Msa1437710 | 0.804207 | 2.413027e-49 | -8.615850e-47 |
| Msa0860280 | Msa1449940 | 0.840288 | 9.515178e-58 | -8.615850e-47 |
| Msa0860280 | Msa1455320 | 0.826892 | 2.113789e-54 | -8.615850e-47 |
| Msa0860280 | Msa1459530 | 0.856253 | 3.644550e-62 | -8.615850e-47 |
| Msa0860280 | Msa1461060 | 0.879433 | 1.251133e-69 | -8.615850e-47 |
| Msa0860280 | Msa1462530 | 0.835187 | 1.942220e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860280 | MtrunA17_Chr5g0439391 | 98.328 | 299 | 0 | 2 | 1 | 295 | 1 | 298 | 0.0 | 608 |
| Msa0860280 | MtrunA17_Chr2g0289201 | 61.798 | 267 | 91 | 3 | 33 | 289 | 103 | 368 | 1.58e-105 | 312 |
| Msa0860280 | MtrunA17_Chr1g0151961 | 55.462 | 238 | 96 | 2 | 46 | 273 | 118 | 355 | 1.73e-75 | 235 |
| Msa0860280 | MtrunA17_Chr5g0413201 | 52.675 | 243 | 96 | 5 | 44 | 272 | 69 | 306 | 1.01e-74 | 231 |
| Msa0860280 | MtrunA17_Chr1g0192791 | 46.693 | 257 | 108 | 5 | 40 | 275 | 12 | 260 | 1.05e-68 | 214 |
| Msa0860280 | MtrunA17_Chr3g0137241 | 34.661 | 251 | 124 | 8 | 48 | 260 | 107 | 355 | 1.74e-34 | 128 |
| Msa0860280 | MtrunA17_Chr2g0305101 | 32.114 | 246 | 127 | 5 | 51 | 260 | 98 | 339 | 2.21e-34 | 128 |
| Msa0860280 | MtrunA17_Chr1g0149651 | 32.245 | 245 | 132 | 5 | 50 | 260 | 176 | 420 | 1.49e-33 | 127 |
| Msa0860280 | MtrunA17_Chr5g0398181 | 32.411 | 253 | 135 | 6 | 44 | 260 | 24 | 276 | 1.20e-32 | 122 |
| Msa0860280 | MtrunA17_Chr4g0065241 | 30.303 | 264 | 138 | 7 | 40 | 260 | 55 | 315 | 5.07e-31 | 118 |
| Msa0860280 | MtrunA17_Chr8g0373801 | 39.394 | 99 | 53 | 4 | 173 | 266 | 546 | 642 | 1.76e-12 | 67.8 |
| Msa0860280 | MtrunA17_Chr5g0403251 | 39.362 | 94 | 51 | 3 | 173 | 262 | 494 | 585 | 3.81e-12 | 66.6 |
| Msa0860280 | MtrunA17_Chr3g0141941 | 35.135 | 111 | 60 | 3 | 158 | 262 | 302 | 406 | 3.66e-11 | 63.5 |
| Msa0860280 | MtrunA17_Chr8g0387321 | 37.634 | 93 | 56 | 1 | 172 | 262 | 338 | 430 | 6.37e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0860280 | AT1G62360.1 | 65.234 | 256 | 75 | 4 | 47 | 289 | 121 | 375 | 7.83e-104 | 308 |
| Msa0860280 | AT4G08150.1 | 56.962 | 237 | 89 | 3 | 50 | 273 | 137 | 373 | 3.05e-75 | 236 |
| Msa0860280 | AT1G23380.1 | 44.876 | 283 | 141 | 5 | 4 | 275 | 42 | 320 | 8.59e-73 | 227 |
| Msa0860280 | AT1G23380.2 | 44.561 | 285 | 141 | 6 | 4 | 275 | 42 | 322 | 9.54e-71 | 222 |
| Msa0860280 | AT1G70510.1 | 49.383 | 243 | 106 | 4 | 45 | 275 | 67 | 304 | 1.36e-70 | 221 |
| Msa0860280 | AT1G70510.2 | 48.583 | 247 | 106 | 5 | 45 | 275 | 67 | 308 | 2.30e-68 | 215 |
| Msa0860280 | AT1G62990.1 | 30.400 | 250 | 141 | 4 | 44 | 260 | 26 | 275 | 8.88e-35 | 127 |
| Msa0860280 | AT5G11060.1 | 34.800 | 250 | 128 | 9 | 44 | 260 | 120 | 367 | 1.95e-34 | 129 |
| Msa0860280 | AT5G25220.2 | 30.242 | 248 | 142 | 6 | 44 | 260 | 156 | 403 | 4.17e-34 | 129 |
| Msa0860280 | AT5G25220.1 | 30.242 | 248 | 142 | 6 | 44 | 260 | 156 | 403 | 5.73e-34 | 128 |
| Msa0860280 | AT4G32040.2 | 28.216 | 241 | 142 | 4 | 51 | 260 | 122 | 362 | 5.66e-30 | 117 |
| Msa0860280 | AT4G32040.1 | 28.216 | 241 | 142 | 4 | 51 | 260 | 122 | 362 | 6.32e-30 | 117 |
| Msa0860280 | AT1G14760.2 | 34.579 | 107 | 61 | 3 | 48 | 149 | 34 | 136 | 1.02e-11 | 62.0 |
| Msa0860280 | AT4G36870.2 | 33.607 | 122 | 72 | 5 | 146 | 262 | 442 | 559 | 1.33e-11 | 65.5 |
| Msa0860280 | AT4G36870.1 | 33.607 | 122 | 72 | 5 | 146 | 262 | 442 | 559 | 1.33e-11 | 65.5 |
| Msa0860280 | AT2G23760.2 | 37.234 | 94 | 53 | 3 | 173 | 262 | 394 | 485 | 2.28e-11 | 64.7 |
| Msa0860280 | AT2G23760.1 | 37.234 | 94 | 53 | 3 | 173 | 262 | 394 | 485 | 2.28e-11 | 64.7 |
| Msa0860280 | AT2G23760.3 | 37.234 | 94 | 53 | 3 | 173 | 262 | 394 | 485 | 2.28e-11 | 64.7 |
| Msa0860280 | AT5G41410.1 | 40.698 | 86 | 43 | 2 | 208 | 287 | 398 | 481 | 8.81e-11 | 62.8 |
Find 85 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTGCAAGTGCTTGCTTT+TGG | 0.251155 | 5_4:+58936742 | None:intergenic |
| TTGCAGTGAGATTTCTTCTA+TGG | 0.262136 | 5_4:-58940653 | Msa0860280:exon |
| ATGAATCTCACTGCCCTTCT+TGG | 0.277420 | 5_4:+58941264 | None:intergenic |
| TGTTGATCTGCTTCAAATCT+AGG | 0.290613 | 5_4:+58936712 | None:intergenic |
| GTGTGGGGACTAAGCAAAAT+AGG | 0.311837 | 5_4:-58940819 | Msa0860280:intron |
| TGTTGTTGTTGGTGTTGTTC+TGG | 0.312881 | 5_4:+58940524 | None:intergenic |
| GAAATATTGAATGGCTCTTC+AGG | 0.317305 | 5_4:-58940072 | Msa0860280:CDS |
| CCTACAAGTGTTGTTGTTGT+TGG | 0.323816 | 5_4:+58940513 | None:intergenic |
| CCTCTGAGTAACAATTCTTC+TGG | 0.333607 | 5_4:-58940577 | Msa0860280:CDS |
| CTGATAAATATGTAGAGTTC+AGG | 0.337698 | 5_4:+58936409 | None:intergenic |
| CTCTTACCTCAATTGCTTGA+AGG | 0.355056 | 5_4:-58940449 | Msa0860280:intron |
| TGATGAACATGGAAACTAAT+AGG | 0.357473 | 5_4:-58940615 | Msa0860280:CDS |
| AAAGTATAATAATCTGTAAA+AGG | 0.363764 | 5_4:+58940986 | None:intergenic |
| TGGGAAAGAGTCAGAAGAAT+AGG | 0.366718 | 5_4:+58940945 | None:intergenic |
| TGTTGTGTTGTGTTAATTGC+AGG | 0.368555 | 5_4:+58941158 | None:intergenic |
| CTTCACCTTGAGTAGTATCT+AGG | 0.374756 | 5_4:+58937761 | None:intergenic |
| TCTAAGCTAGCTACCACTTC+AGG | 0.391672 | 5_4:+58940114 | None:intergenic |
| TCCAGGTTTGGATCAGTTCA+TGG | 0.403203 | 5_4:-58940013 | Msa0860280:intron |
| GAAAAGCATGGCTTCTTTGA+AGG | 0.406625 | 5_4:+58939942 | None:intergenic |
| CCAACAACAACAACACTTGT+AGG | 0.411085 | 5_4:-58940513 | Msa0860280:CDS |
| CGCAAGTATAGTGGATATCT+AGG | 0.434219 | 5_4:-58937712 | Msa0860280:CDS |
| TACTACTCAAGGTGAAGATC+AGG | 0.439850 | 5_4:-58937755 | Msa0860280:CDS |
| AGTTGCTGTCGAGCTTCCTT+TGG | 0.440818 | 5_4:+58937643 | None:intergenic |
| GGCATAGCATCCATAGGAAA+TGG | 0.441925 | 5_4:+58936585 | None:intergenic |
| CTCGACAGCAACTACTTGAT+TGG | 0.448986 | 5_4:-58937633 | Msa0860280:CDS |
| GAAACTATGTTAGGGTTTGG+AGG | 0.466056 | 5_4:-58940682 | Msa0860280:intron |
| GGGAAAGAGTCAGAAGAATA+GGG | 0.468134 | 5_4:+58940946 | None:intergenic |
| CTTCAATTCCGGGAGTACTC+TGG | 0.471621 | 5_4:-58940879 | Msa0860280:five_prime_UTR |
| TGAAGTGGTAGCTAGCTTAG+AGG | 0.472609 | 5_4:-58940112 | Msa0860280:CDS |
| GGAAGTAGTAGTTCTTGTAT+AGG | 0.474614 | 5_4:-58940042 | Msa0860280:intron |
| AACTACTTGATTGGTGGAGC+AGG | 0.476464 | 5_4:-58937624 | Msa0860280:CDS |
| ATTTGAAGCAGATCAACAAT+TGG | 0.483386 | 5_4:-58936707 | Msa0860280:CDS |
| TCAGGACCTTCAAGCAATTG+AGG | 0.486076 | 5_4:+58940443 | None:intergenic |
| GTAATCTTTAATCTGTAGAA+AGG | 0.488229 | 5_4:-58936456 | Msa0860280:three_prime_UTR |
| GTTGCTGTTTCAACTGACTT+TGG | 0.488737 | 5_4:-58939889 | Msa0860280:intron |
| CAGCTTCTACGCAAGTATAG+TGG | 0.489736 | 5_4:-58937721 | Msa0860280:CDS |
| AAAAGCATGGCTTCTTTGAA+GGG | 0.505700 | 5_4:+58939943 | None:intergenic |
| TTTCATAAACAGTAAAGTGT+GGG | 0.507878 | 5_4:-58940835 | Msa0860280:five_prime_UTR |
| TGATAAATATGTAGAGTTCA+GGG | 0.516722 | 5_4:+58936410 | None:intergenic |
| TAAAATTACCTAGGTTGTGA+AGG | 0.521849 | 5_4:-58936509 | Msa0860280:three_prime_UTR |
| GGATATGCAATTTGCTGTGA+TGG | 0.523714 | 5_4:-58936646 | Msa0860280:CDS |
| GCTGAGACTCAATTCTTGAA+AGG | 0.524479 | 5_4:+58939920 | None:intergenic |
| GGTGGAGCAGGCATTACAAA+TGG | 0.526535 | 5_4:-58937612 | Msa0860280:CDS |
| CACTTGTAGGGATAAAATCA+TGG | 0.535342 | 5_4:-58940500 | Msa0860280:CDS |
| GACAGCAACTACTTGATTGG+TGG | 0.536393 | 5_4:-58937630 | Msa0860280:CDS |
| AGAATAGTTACCGATGGGTA+AGG | 0.537725 | 5_4:+58937589 | None:intergenic |
| CTTCAAGCAATTGAGGTAAG+AGG | 0.538407 | 5_4:+58940450 | None:intergenic |
| AATGGCTCTTCAGGAAGGAC+AGG | 0.539828 | 5_4:-58940063 | Msa0860280:CDS |
| GACAAGAGACGAGGAAAGAG+AGG | 0.541929 | 5_4:+58940472 | None:intergenic |
| ATAATTGTCCAGAGTACTCC+CGG | 0.545971 | 5_4:+58940871 | None:intergenic |
| TGTGTTGTGTTAATTGCAGG+TGG | 0.551211 | 5_4:+58941161 | None:intergenic |
| AAGAATTGAGTCTCAGCTCA+AGG | 0.557965 | 5_4:-58939914 | Msa0860280:CDS |
| GTATAATAATCTGTAAAAGG+TGG | 0.560540 | 5_4:+58940989 | None:intergenic |
| TGTAGAGTTCAGGGATAGTG+TGG | 0.560936 | 5_4:+58936419 | None:intergenic |
| TGTTTGATGTACACAACAGA+AGG | 0.567042 | 5_4:-58941063 | Msa0860280:five_prime_UTR |
| CAACAACAACAACACTTGTA+GGG | 0.569221 | 5_4:-58940512 | Msa0860280:CDS |
| AGTAATTGCGTAGACCAAGA+AGG | 0.570221 | 5_4:-58941278 | Msa0860280:five_prime_UTR |
| GTAATTGCGTAGACCAAGAA+GGG | 0.575239 | 5_4:-58941277 | Msa0860280:five_prime_UTR |
| AATTCTTGAAAGGAAAAGCA+TGG | 0.577216 | 5_4:+58939930 | None:intergenic |
| TTAATGTGCTAAAGAAGCAT+AGG | 0.578609 | 5_4:+58936564 | None:intergenic |
| TTAATCAGAGAAAACGCCAC+TGG | 0.580206 | 5_4:-58936680 | Msa0860280:CDS |
| GGATGCCACAAATTACTACA+TGG | 0.582043 | 5_4:-58936625 | Msa0860280:CDS |
| GATGTGCAAGCCATTTCCTA+TGG | 0.586987 | 5_4:-58936595 | Msa0860280:CDS |
| TTGCAGGTGGAGACAGAGAG+AGG | 0.587313 | 5_4:+58941174 | None:intergenic |
| TGCAGGTGGAGACAGAGAGA+GGG | 0.597322 | 5_4:+58941175 | None:intergenic |
| CAAGCACTTGCAGAATCCAC+AGG | 0.600586 | 5_4:-58936735 | Msa0860280:CDS |
| GCAAAATGTGAAATATTGAA+TGG | 0.601951 | 5_4:-58940081 | Msa0860280:CDS |
| TCAAAATCAAATGATGAACA+TGG | 0.604915 | 5_4:-58940626 | Msa0860280:CDS |
| GGTTGGAGCACCTCCTGAAG+TGG | 0.605641 | 5_4:-58940127 | Msa0860280:CDS |
| TTACAAATGGCCTTACCCAT+CGG | 0.606989 | 5_4:-58937599 | Msa0860280:intron |
| CTGCTTCAAATCTAGGCCTG+TGG | 0.610652 | 5_4:+58936719 | None:intergenic |
| TATTGAATGGCTCTTCAGGA+AGG | 0.613053 | 5_4:-58940068 | Msa0860280:CDS |
| GCAAATTGCATATCCTCAGA+AGG | 0.614720 | 5_4:+58936654 | None:intergenic |
| TTCATAAACAGTAAAGTGTG+GGG | 0.617163 | 5_4:-58940834 | Msa0860280:five_prime_UTR |
| ACGCCACTGGAAGCCTTCTG+AGG | 0.619253 | 5_4:-58936667 | Msa0860280:CDS |
| ATATTGTACCTTCACAACCT+AGG | 0.627623 | 5_4:+58936501 | None:intergenic |
| AGCATAGGCATAGCATCCAT+AGG | 0.634428 | 5_4:+58936579 | None:intergenic |
| CTTTAATCTGTAGAAAGGTG+AGG | 0.636593 | 5_4:-58936451 | Msa0860280:three_prime_UTR |
| AAAGAATGGAAAGTTACCAA+AGG | 0.641055 | 5_4:-58937659 | Msa0860280:CDS |
| AACAACCTAGATACTACTCA+AGG | 0.648557 | 5_4:-58937766 | Msa0860280:CDS |
| CCAGAAGAATTGTTACTCAG+AGG | 0.660627 | 5_4:+58940577 | None:intergenic |
| TATCCTCAGAAGGCTTCCAG+TGG | 0.672824 | 5_4:+58936664 | None:intergenic |
| AGGTAAGAGGACAAGAGACG+AGG | 0.679022 | 5_4:+58940463 | None:intergenic |
| AAGCTAGCTACCACTTCAGG+AGG | 0.698056 | 5_4:+58940117 | None:intergenic |
| AGGTTTGGATCAGTTCATGG+AGG | 0.735955 | 5_4:-58940010 | Msa0860280:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAATAAATATTTTTTA+AGG | + | chr5_4:58939738-58939757 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTTTTTTTTTTTA+AGG | + | chr5_4:58940316-58940335 | None:intergenic | 0.0% |
| !! | ATGAAGATAATATAATTTAA+GGG | + | chr5_4:58937770-58937789 | None:intergenic | 10.0% |
| !! | TTCTTTAATTAAATTAAACT+TGG | - | chr5_4:58938644-58938663 | Msa0860280:intron | 10.0% |
| !!! | TTCAAATAGTTTTTTTTTTA+AGG | + | chr5_4:58938916-58938935 | None:intergenic | 10.0% |
| !! | ATTATATTGAAATTAACAAA+TGG | + | chr5_4:58939057-58939076 | None:intergenic | 10.0% |
| !! | AAAGTATAATAATCTGTAAA+AGG | + | chr5_4:58936644-58936663 | None:intergenic | 15.0% |
| !! | TAGAAAAAACTAAAAAACTT+GGG | + | chr5_4:58936704-58936723 | None:intergenic | 15.0% |
| !!! | GAGATTTTTTTTAAACTTTA+TGG | - | chr5_4:58937424-58937443 | Msa0860280:intron | 15.0% |
| !! | CATGAAGATAATATAATTTA+AGG | + | chr5_4:58937771-58937790 | None:intergenic | 15.0% |
| !!! | AAGTAAATATTCATTTTAAC+TGG | - | chr5_4:58937824-58937843 | Msa0860280:intron | 15.0% |
| !! | TATTTACTTACGATAAAAAA+GGG | + | chr5_4:58938051-58938070 | None:intergenic | 15.0% |
| !!! | TATAATTTTTTTGCACAAAT+GGG | - | chr5_4:58938391-58938410 | Msa0860280:intron | 15.0% |
| !! | TTGTGAAATATTTATGTATT+TGG | + | chr5_4:58939155-58939174 | None:intergenic | 15.0% |
| !!! | ATTATTCTTTTATCAAATGT+AGG | - | chr5_4:58939282-58939301 | Msa0860280:intron | 15.0% |
| !!! | TTATTCTTTTATCAAATGTA+GGG | - | chr5_4:58939283-58939302 | Msa0860280:intron | 15.0% |
| !!! | TTTAGAGTTTTTCATATAAT+AGG | - | chr5_4:58940207-58940226 | Msa0860280:intron | 15.0% |
| !! | TTTGTGAATTATTTGTAATT+AGG | - | chr5_4:58940354-58940373 | Msa0860280:intron | 15.0% |
| !! | AAACTTTAAATATTGTCATT+AGG | + | chr5_4:58940395-58940414 | None:intergenic | 15.0% |
| !!! | ATTTTAGAATTTAAAAGATC+AGG | - | chr5_4:58940662-58940681 | Msa0860280:five_prime_UTR | 15.0% |
| !!! | AGGTAATTTTAAAATAGATA+GGG | + | chr5_4:58941109-58941128 | None:intergenic | 15.0% |
| !!! | TAGGTAATTTTAAAATAGAT+AGG | + | chr5_4:58941110-58941129 | None:intergenic | 15.0% |
| !!! | TATCTATTTTAAAATTACCT+AGG | - | chr5_4:58941109-58941128 | Msa0860280:five_prime_UTR | 15.0% |
| !!! | AGATTCATTTTCATTTTCAT+TGG | - | chr5_4:58936378-58936397 | Msa0860280:three_prime_UTR | 20.0% |
| !!! | GATTCATTTTCATTTTCATT+GGG | - | chr5_4:58936379-58936398 | Msa0860280:three_prime_UTR | 20.0% |
| !! | GTAGAAAAAACTAAAAAACT+TGG | + | chr5_4:58936705-58936724 | None:intergenic | 20.0% |
| !! | ATGCATATGCATTATTATAT+AGG | - | chr5_4:58936869-58936888 | Msa0860280:intron | 20.0% |
| !!! | TTTGTTTTGAAACTATGTTA+GGG | - | chr5_4:58936937-58936956 | Msa0860280:intron | 20.0% |
| !!! | AATGTTAATAAACTTTTCCA+AGG | + | chr5_4:58937802-58937821 | None:intergenic | 20.0% |
| !!! | ATTCTTTTTTTCTCTTTTCT+AGG | + | chr5_4:58937901-58937920 | None:intergenic | 20.0% |
| !! | TAGAAAAGAGAAAAAAAGAA+TGG | - | chr5_4:58937900-58937919 | Msa0860280:intron | 20.0% |
| !! | CTATTTACTTACGATAAAAA+AGG | + | chr5_4:58938052-58938071 | None:intergenic | 20.0% |
| !!! | TTGAAATTGTGTTTTTAACA+TGG | - | chr5_4:58938106-58938125 | Msa0860280:intron | 20.0% |
| !!! | AATTAAGTAAAATGAGGTTT+TGG | - | chr5_4:58938189-58938208 | Msa0860280:intron | 20.0% |
| !!! | TATGTCTAAAGTAATTTACA+CGG | - | chr5_4:58938346-58938365 | Msa0860280:intron | 20.0% |
| !!! | GTATAATTTTTTTGCACAAA+TGG | - | chr5_4:58938390-58938409 | Msa0860280:intron | 20.0% |
| !! | AGGAATTTGAATAAAAATTG+AGG | + | chr5_4:58938425-58938444 | None:intergenic | 20.0% |
| !!! | TAAATTAAACTTGGTGAAAA+AGG | - | chr5_4:58938653-58938672 | Msa0860280:intron | 20.0% |
| !! | AAGTTTAATTCTCAAAACTA+AGG | - | chr5_4:58938729-58938748 | Msa0860280:intron | 20.0% |
| !! | ACATAAATATTTCACAACTT+AGG | - | chr5_4:58939158-58939177 | Msa0860280:intron | 20.0% |
| !! | CATAAATATTTCACAACTTA+GGG | - | chr5_4:58939159-58939178 | Msa0860280:intron | 20.0% |
| !! | ATAAATATTTCACAACTTAG+GGG | - | chr5_4:58939160-58939179 | Msa0860280:intron | 20.0% |
| !! | TAAGTGCAATTAGTAATATT+TGG | - | chr5_4:58939451-58939470 | Msa0860280:intron | 20.0% |
| !! | AACAATTGCCTATAAAAAAA+GGG | + | chr5_4:58939513-58939532 | None:intergenic | 20.0% |
| !! | TAACAATTGCCTATAAAAAA+AGG | + | chr5_4:58939514-58939533 | None:intergenic | 20.0% |
| !! | TTAGTTTAGTAAATTGTTAG+AGG | - | chr5_4:58939531-58939550 | Msa0860280:intron | 20.0% |
| !! | TAGTTTAGTAAATTGTTAGA+GGG | - | chr5_4:58939532-58939551 | Msa0860280:intron | 20.0% |
| !!! | TTTTTGAAGAAGAAAAAGAA+TGG | - | chr5_4:58939954-58939973 | Msa0860280:CDS | 20.0% |
| !!! | ATCTTGATTTATAGCATTTT+AGG | - | chr5_4:58940156-58940175 | Msa0860280:intron | 20.0% |
| !!! | TTTAGGTTTGATTATTTTGA+AGG | - | chr5_4:58940173-58940192 | Msa0860280:intron | 20.0% |
| !! | ATAAATCATTGACATATTCA+AGG | + | chr5_4:58940262-58940281 | None:intergenic | 20.0% |
| !!! | GTTTCTGATGTTTTAAATAA+GGG | + | chr5_4:58940558-58940577 | None:intergenic | 20.0% |
| !!! | AGTTTCTGATGTTTTAAATA+AGG | + | chr5_4:58940559-58940578 | None:intergenic | 20.0% |
| !!! | TACTGATTATTTTAACGTTA+GGG | - | chr5_4:58940583-58940602 | Msa0860280:CDS | 20.0% |
| !! | AAATAAATTATCGCAATCAT+AGG | + | chr5_4:58940709-58940728 | None:intergenic | 20.0% |
| !! | AATGAAACCTTAATATCAAA+TGG | - | chr5_4:58940809-58940828 | Msa0860280:intron | 20.0% |
| ! | GTATAATAATCTGTAAAAGG+TGG | + | chr5_4:58936641-58936660 | None:intergenic | 25.0% |
| !!! | AGATTTTTTAGCTTCAATTC+CGG | - | chr5_4:58936737-58936756 | Msa0860280:CDS | 25.0% |
| !! | TTTTCATAAACAGTAAAGTG+TGG | - | chr5_4:58936791-58936810 | Msa0860280:intron | 25.0% |
| ! | TTTCATAAACAGTAAAGTGT+GGG | - | chr5_4:58936792-58936811 | Msa0860280:intron | 25.0% |
| !!! | CTTTGTTTTGAAACTATGTT+AGG | - | chr5_4:58936936-58936955 | Msa0860280:intron | 25.0% |
| ! | TCAAAATCAAATGATGAACA+TGG | - | chr5_4:58937001-58937020 | Msa0860280:intron | 25.0% |
| !! | TCTCAAAAACAAACATTTTG+TGG | + | chr5_4:58937408-58937427 | None:intergenic | 25.0% |
| !!! | TTTAAGTGTGATTTTTTTGC+AGG | - | chr5_4:58937479-58937498 | Msa0860280:intron | 25.0% |
| ! | GCAAAATGTGAAATATTGAA+TGG | - | chr5_4:58937546-58937565 | Msa0860280:intron | 25.0% |
| !! | ATAAACTTTTCCAAGGATAA+TGG | + | chr5_4:58937795-58937814 | None:intergenic | 25.0% |
| !! | TTCTCTTTTCTAGGTTTTTA+GGG | + | chr5_4:58937892-58937911 | None:intergenic | 25.0% |
| !! | TTTCTCTTTTCTAGGTTTTT+AGG | + | chr5_4:58937893-58937912 | None:intergenic | 25.0% |
| !!! | TAGTGTGATTAGAGTTTTAA+AGG | - | chr5_4:58938069-58938088 | Msa0860280:intron | 25.0% |
| ! | AAATGATAGATTACTTCCTA+TGG | - | chr5_4:58938163-58938182 | Msa0860280:intron | 25.0% |
| ! | AATGATAGATTACTTCCTAT+GGG | - | chr5_4:58938164-58938183 | Msa0860280:intron | 25.0% |
| !! | ATTTTACTTAATTTCCCCAT+AGG | + | chr5_4:58938182-58938201 | None:intergenic | 25.0% |
| ! | AACAAAATTGAACATAACCA+AGG | + | chr5_4:58938511-58938530 | None:intergenic | 25.0% |
| ! | ATTCCTTAACTTCATTTACA+TGG | - | chr5_4:58938594-58938613 | Msa0860280:intron | 25.0% |
| ! | ACTTTATAGAGAACGAATTA+AGG | + | chr5_4:58938713-58938732 | None:intergenic | 25.0% |
| !! | AGGTAAATTTTTCATTTGCA+TGG | - | chr5_4:58938749-58938768 | Msa0860280:intron | 25.0% |
| ! | AACTAAACTACTACAAAAGA+GGG | + | chr5_4:58938788-58938807 | None:intergenic | 25.0% |
| ! | AAACTAAACTACTACAAAAG+AGG | + | chr5_4:58938789-58938808 | None:intergenic | 25.0% |
| ! | GTTCTTTCCTATCATTAAAT+GGG | + | chr5_4:58938979-58938998 | None:intergenic | 25.0% |
| ! | AGTTCTTTCCTATCATTAAA+TGG | + | chr5_4:58938980-58938999 | None:intergenic | 25.0% |
| !!! | AATGCTTCATTTTTACACAT+AGG | - | chr5_4:58939084-58939103 | Msa0860280:intron | 25.0% |
| ! | TTAAAAGTAAGCTCAAATGA+TGG | - | chr5_4:58939121-58939140 | Msa0860280:intron | 25.0% |
| ! | TAAGATTCTTAATGAAGAAG+TGG | + | chr5_4:58939221-58939240 | None:intergenic | 25.0% |
| ! | CTTCTTCATTAAGAATCTTA+TGG | - | chr5_4:58939221-58939240 | Msa0860280:intron | 25.0% |
| ! | TTTAGTACATTAGTTGTTGT+TGG | - | chr5_4:58939378-58939397 | Msa0860280:intron | 25.0% |
| ! | ACAATTGCCTATAAAAAAAG+GGG | + | chr5_4:58939512-58939531 | None:intergenic | 25.0% |
| ! | AGTTTAGTAAATTGTTAGAG+GGG | - | chr5_4:58939533-58939552 | Msa0860280:intron | 25.0% |
| ! | AAACTAATAAATGTCTAGTC+AGG | + | chr5_4:58939681-58939700 | None:intergenic | 25.0% |
| ! | TCTTCAAAAACTCTTTCTTA+AGG | + | chr5_4:58939944-58939963 | None:intergenic | 25.0% |
| ! | TCAATGTTCATAATCATATC+TGG | - | chr5_4:58940129-58940148 | Msa0860280:CDS | 25.0% |
| ! | GAAAAACTCTAAATTGTTCA+GGG | + | chr5_4:58940200-58940219 | None:intergenic | 25.0% |
| ! | TGAAAAACTCTAAATTGTTC+AGG | + | chr5_4:58940201-58940220 | None:intergenic | 25.0% |
| ! | TGTAATTAGGTACGAAATTT+AGG | - | chr5_4:58940367-58940386 | Msa0860280:intron | 25.0% |
| !!! | GTCAATGATTTATGTTTTTG+AGG | - | chr5_4:58940453-58940472 | Msa0860280:CDS | 25.0% |
| !! | AAATGTAGTAAGTATTGCAT+TGG | + | chr5_4:58940496-58940515 | None:intergenic | 25.0% |
| !!! | CTACTGATTATTTTAACGTT+AGG | - | chr5_4:58940582-58940601 | Msa0860280:CDS | 25.0% |
| ! | GTATTAGCCATTTGATATTA+AGG | + | chr5_4:58940819-58940838 | None:intergenic | 25.0% |
| !! | ATTTTCCATGTAGTAATTTG+TGG | + | chr5_4:58941010-58941029 | None:intergenic | 25.0% |
| ! | GTAATCTTTAATCTGTAGAA+AGG | - | chr5_4:58941171-58941190 | Msa0860280:five_prime_UTR | 25.0% |
| ! | TGATAAATATGTAGAGTTCA+GGG | + | chr5_4:58941220-58941239 | None:intergenic | 25.0% |
| ! | CATTTTCATTTTCATTGGGA+AGG | - | chr5_4:58936383-58936402 | Msa0860280:three_prime_UTR | 30.0% |
| ! | ACATACTACTCATTTTGCAT+TGG | - | chr5_4:58936603-58936622 | Msa0860280:CDS | 30.0% |
| ! | TCAGAAGAATAGGGATTTTT+GGG | + | chr5_4:58936675-58936694 | None:intergenic | 30.0% |
| !!! | GATTTTTTAGCTTCAATTCC+GGG | - | chr5_4:58936738-58936757 | Msa0860280:CDS | 30.0% |
| TTCATAAACAGTAAAGTGTG+GGG | - | chr5_4:58936793-58936812 | Msa0860280:intron | 30.0% | |
| ! | TTTGAAACTATGTTAGGGTT+TGG | - | chr5_4:58936942-58936961 | Msa0860280:intron | 30.0% |
| TGATGAACATGGAAACTAAT+AGG | - | chr5_4:58937012-58937031 | Msa0860280:intron | 30.0% | |
| AATTCTTGAAAGGAAAAGCA+TGG | + | chr5_4:58937700-58937719 | None:intergenic | 30.0% | |
| !! | TCTCTTTTCTAGGTTTTTAG+GGG | + | chr5_4:58937891-58937910 | None:intergenic | 30.0% |
| !!! | GAATGGTCTATGTGTTTTTT+TGG | - | chr5_4:58937917-58937936 | Msa0860280:intron | 30.0% |
| GTCATATTATACTTACCTCA+CGG | + | chr5_4:58938010-58938029 | None:intergenic | 30.0% | |
| TTGAACTAGGTTAAAAGGTT+TGG | - | chr5_4:58938140-58938159 | Msa0860280:intron | 30.0% | |
| ATGATAGATTACTTCCTATG+GGG | - | chr5_4:58938165-58938184 | Msa0860280:intron | 30.0% | |
| TGGGGAAATTAAGTAAAATG+AGG | - | chr5_4:58938183-58938202 | Msa0860280:intron | 30.0% | |
| AATTCCTAATGCAATCTTGA+TGG | - | chr5_4:58938438-58938457 | Msa0860280:intron | 30.0% | |
| AAATCCATCAAGATTGCATT+AGG | + | chr5_4:58938445-58938464 | None:intergenic | 30.0% | |
| AAAAATGCCTTCAAAACATC+CGG | + | chr5_4:58938468-58938487 | None:intergenic | 30.0% | |
| ATGATATTCACACAAACACT+AGG | + | chr5_4:58938541-58938560 | None:intergenic | 30.0% | |
| GAACCATGTAAATGAAGTTA+AGG | + | chr5_4:58938600-58938619 | None:intergenic | 30.0% | |
| TTAAGGAAAACATACGACAA+AGG | + | chr5_4:58938696-58938715 | None:intergenic | 30.0% | |
| !! | TGCCTTAGTTGATTTTCATA+TGG | - | chr5_4:58938843-58938862 | Msa0860280:intron | 30.0% |
| !! | GCCTTAGTTGATTTTCATAT+GGG | - | chr5_4:58938844-58938863 | Msa0860280:intron | 30.0% |
| ACCCATATGAAAATCAACTA+AGG | + | chr5_4:58938848-58938867 | None:intergenic | 30.0% | |
| TGAAAGTCCCATTTAATGAT+AGG | - | chr5_4:58938969-58938988 | Msa0860280:intron | 30.0% | |
| ! | CATCAATTGACAAAGTCTTT+TGG | - | chr5_4:58939000-58939019 | Msa0860280:intron | 30.0% |
| !!! | TACATGACCCCTTTTTTTAT+AGG | - | chr5_4:58939502-58939521 | Msa0860280:intron | 30.0% |
| ACATTGAATGAGATTTAAGG+AGG | + | chr5_4:58939596-58939615 | None:intergenic | 30.0% | |
| AAAGAATGGAAAGTTACCAA+AGG | - | chr5_4:58939968-58939987 | Msa0860280:CDS | 30.0% | |
| TTCGAGATCAAAAACATTAG+AGG | - | chr5_4:58940608-58940627 | Msa0860280:CDS | 30.0% | |
| TAAATTATCGCAATCATAGG+AGG | + | chr5_4:58940706-58940725 | None:intergenic | 30.0% | |
| TTGTGATTTGATGAACATGT+AGG | - | chr5_4:58940858-58940877 | Msa0860280:five_prime_UTR | 30.0% | |
| ! | ATTTGAAGCAGATCAACAAT+TGG | - | chr5_4:58940920-58940939 | Msa0860280:five_prime_UTR | 30.0% |
| ! | TTAATGTGCTAAAGAAGCAT+AGG | + | chr5_4:58941066-58941085 | None:intergenic | 30.0% |
| TAAAATTACCTAGGTTGTGA+AGG | - | chr5_4:58941118-58941137 | Msa0860280:five_prime_UTR | 30.0% | |
| CTGATAAATATGTAGAGTTC+AGG | + | chr5_4:58941221-58941240 | None:intergenic | 30.0% | |
| TGTTGTGTTGTGTTAATTGC+AGG | + | chr5_4:58936472-58936491 | None:intergenic | 35.0% | |
| TGTTTGATGTACACAACAGA+AGG | - | chr5_4:58936564-58936583 | Msa0860280:exon | 35.0% | |
| ! | CAGAAGAATAGGGATTTTTG+GGG | + | chr5_4:58936674-58936693 | None:intergenic | 35.0% |
| ! | GTCAGAAGAATAGGGATTTT+TGG | + | chr5_4:58936676-58936695 | None:intergenic | 35.0% |
| TTGCAGTGAGATTTCTTCTA+TGG | - | chr5_4:58936974-58936993 | Msa0860280:intron | 35.0% | |
| CAACAACAACAACACTTGTA+GGG | - | chr5_4:58937115-58937134 | Msa0860280:intron | 35.0% | |
| CACTTGTAGGGATAAAATCA+TGG | - | chr5_4:58937127-58937146 | Msa0860280:intron | 35.0% | |
| !!! | CAAGTTTTCGCTTGTTTTGA+TGG | - | chr5_4:58937456-58937475 | Msa0860280:intron | 35.0% |
| !!! | AGTGTGATTTTTTTGCAGGT+TGG | - | chr5_4:58937483-58937502 | Msa0860280:intron | 35.0% |
| GAAATATTGAATGGCTCTTC+AGG | - | chr5_4:58937555-58937574 | Msa0860280:intron | 35.0% | |
| GGAAGTAGTAGTTCTTGTAT+AGG | - | chr5_4:58937585-58937604 | Msa0860280:intron | 35.0% | |
| ! | AAAAGCATGGCTTCTTTGAA+GGG | + | chr5_4:58937687-58937706 | None:intergenic | 35.0% |
| ATCTTCATGACCATTATCCT+TGG | - | chr5_4:58937782-58937801 | Msa0860280:CDS | 35.0% | |
| TAATTGAACTACTAGAGGTG+TGG | + | chr5_4:58937863-58937882 | None:intergenic | 35.0% | |
| GGTGATAATTGAACTACTAG+AGG | + | chr5_4:58937868-58937887 | None:intergenic | 35.0% | |
| !! | TCTTTTCTAGGTTTTTAGGG+GGG | + | chr5_4:58937889-58937908 | None:intergenic | 35.0% |
| !! | CTCTTTTCTAGGTTTTTAGG+GGG | + | chr5_4:58937890-58937909 | None:intergenic | 35.0% |
| TGTTAACCCTCTAGTTACTA+GGG | - | chr5_4:58937957-58937976 | Msa0860280:intron | 35.0% | |
| ATGACCAAGAATTAGTGAGA+TGG | - | chr5_4:58938025-58938044 | Msa0860280:intron | 35.0% | |
| !! | GTGTTTTTAACATGGATCCA+AGG | - | chr5_4:58938114-58938133 | Msa0860280:intron | 35.0% |
| TTAACCTAGTTCAAACACCT+TGG | + | chr5_4:58938134-58938153 | None:intergenic | 35.0% | |
| GGTGTTTGAACTAGGTTAAA+AGG | - | chr5_4:58938135-58938154 | Msa0860280:intron | 35.0% | |
| TGACAACTACGATTGATTGT+TGG | + | chr5_4:58938292-58938311 | None:intergenic | 35.0% | |
| !! | ATGCAATCTTGATGGATTTC+CGG | - | chr5_4:58938446-58938465 | Msa0860280:intron | 35.0% |
| GAAAGAAGAACTAACACACA+AGG | + | chr5_4:58938565-58938584 | None:intergenic | 35.0% | |
| ! | TGTAGTAGTTTAGTTTCCAG+TGG | - | chr5_4:58938793-58938812 | Msa0860280:intron | 35.0% |
| GGGACATTGAATGAGATTTA+AGG | + | chr5_4:58939599-58939618 | None:intergenic | 35.0% | |
| CAGTTCATGTAATCATTGTC+CGG | + | chr5_4:58939648-58939667 | None:intergenic | 35.0% | |
| !! | TAGTTCTTCCGTTTGATTTG+TGG | - | chr5_4:58939772-58939791 | Msa0860280:intron | 35.0% |
| ACACAACACCACAAATCAAA+CGG | + | chr5_4:58939783-58939802 | None:intergenic | 35.0% | |
| !! | TGGTGTTGTGTTACTTTGAA+AGG | - | chr5_4:58939792-58939811 | Msa0860280:intron | 35.0% |
| AACAACCTAGATACTACTCA+AGG | - | chr5_4:58939861-58939880 | Msa0860280:intron | 35.0% | |
| GATGTAGAATAGTTACCGAT+GGG | + | chr5_4:58940046-58940065 | None:intergenic | 35.0% | |
| AGATGTAGAATAGTTACCGA+TGG | + | chr5_4:58940047-58940066 | None:intergenic | 35.0% | |
| TCATATATCAATCATGCCGT+TGG | - | chr5_4:58940076-58940095 | Msa0860280:CDS | 35.0% | |
| TGTGCTATGAAACATTCCAA+CGG | + | chr5_4:58940095-58940114 | None:intergenic | 35.0% | |
| TGATTTCTTAATCAATGCCC+AGG | - | chr5_4:58940515-58940534 | Msa0860280:CDS | 35.0% | |
| GATTTCTTAATCAATGCCCA+GGG | - | chr5_4:58940516-58940535 | Msa0860280:CDS | 35.0% | |
| ATTTCTTAATCAATGCCCAG+GGG | - | chr5_4:58940517-58940536 | Msa0860280:CDS | 35.0% | |
| GATCAAAAACATTAGAGGCT+TGG | - | chr5_4:58940613-58940632 | Msa0860280:CDS | 35.0% | |
| TGTTGATCTGCTTCAAATCT+AGG | + | chr5_4:58940918-58940937 | None:intergenic | 35.0% | |
| ATATTGTACCTTCACAACCT+AGG | + | chr5_4:58941129-58941148 | None:intergenic | 35.0% | |
| CTTTAATCTGTAGAAAGGTG+AGG | - | chr5_4:58941176-58941195 | Msa0860280:five_prime_UTR | 35.0% | |
| TGTGTTGTGTTAATTGCAGG+TGG | + | chr5_4:58936469-58936488 | None:intergenic | 40.0% | |
| !!! | ATAGGGATTTTTGGGGTTCT+TGG | + | chr5_4:58936667-58936686 | None:intergenic | 40.0% |
| GGGAAAGAGTCAGAAGAATA+GGG | + | chr5_4:58936684-58936703 | None:intergenic | 40.0% | |
| TGGGAAAGAGTCAGAAGAAT+AGG | + | chr5_4:58936685-58936704 | None:intergenic | 40.0% | |
| ! | ATAATTGTCCAGAGTACTCC+CGG | + | chr5_4:58936759-58936778 | None:intergenic | 40.0% |
| GAAACTATGTTAGGGTTTGG+AGG | - | chr5_4:58936945-58936964 | Msa0860280:intron | 40.0% | |
| CCAGAAGAATTGTTACTCAG+AGG | + | chr5_4:58937053-58937072 | None:intergenic | 40.0% | |
| CCTCTGAGTAACAATTCTTC+TGG | - | chr5_4:58937050-58937069 | Msa0860280:intron | 40.0% | |
| !! | TGTTGTTGTTGGTGTTGTTC+TGG | + | chr5_4:58937106-58937125 | None:intergenic | 40.0% |
| ! | CCTACAAGTGTTGTTGTTGT+TGG | + | chr5_4:58937117-58937136 | None:intergenic | 40.0% |
| CCAACAACAACAACACTTGT+AGG | - | chr5_4:58937114-58937133 | Msa0860280:intron | 40.0% | |
| CTTCAAGCAATTGAGGTAAG+AGG | + | chr5_4:58937180-58937199 | None:intergenic | 40.0% | |
| CTCTTACCTCAATTGCTTGA+AGG | - | chr5_4:58937178-58937197 | Msa0860280:intron | 40.0% | |
| ! | TGTGTGTGAGTTTGAAGTTC+AGG | + | chr5_4:58937205-58937224 | None:intergenic | 40.0% |
| TATTGAATGGCTCTTCAGGA+AGG | - | chr5_4:58937559-58937578 | Msa0860280:intron | 40.0% | |
| TCTTGTATAGGTGAAGATCC+AGG | - | chr5_4:58937597-58937616 | Msa0860280:intron | 40.0% | |
| TATAGGTGAAGATCCAGGTT+TGG | - | chr5_4:58937602-58937621 | Msa0860280:CDS | 40.0% | |
| ! | GAAAAGCATGGCTTCTTTGA+AGG | + | chr5_4:58937688-58937707 | None:intergenic | 40.0% |
| GCTGAGACTCAATTCTTGAA+AGG | + | chr5_4:58937710-58937729 | None:intergenic | 40.0% | |
| AAGAATTGAGTCTCAGCTCA+AGG | - | chr5_4:58937713-58937732 | Msa0860280:CDS | 40.0% | |
| !! | GTTGCTGTTTCAACTGACTT+TGG | - | chr5_4:58937738-58937757 | Msa0860280:CDS | 40.0% |
| GTGTTAACCCTCTAGTTACT+AGG | - | chr5_4:58937956-58937975 | Msa0860280:intron | 40.0% | |
| !! | TGGATTTCCGGATGTTTTGA+AGG | - | chr5_4:58938458-58938477 | Msa0860280:intron | 40.0% |
| TTTCCTTTCATGTGTGACCT+TGG | - | chr5_4:58938491-58938510 | Msa0860280:intron | 40.0% | |
| TAACCAAGGTCACACATGAA+AGG | + | chr5_4:58938497-58938516 | None:intergenic | 40.0% | |
| ! | AGTAGTTTAGTTTCCAGTGG+TGG | - | chr5_4:58938796-58938815 | Msa0860280:intron | 40.0% |
| GGGACTTTCAACTTCTTTAG+TGG | + | chr5_4:58938959-58938978 | None:intergenic | 40.0% | |
| TTCACAACTTAGGGGATGAT+TGG | - | chr5_4:58939168-58939187 | Msa0860280:intron | 40.0% | |
| AAGCATTCCTCACACTAATG+TGG | - | chr5_4:58939341-58939360 | Msa0860280:intron | 40.0% | |
| AGCATTCCTCACACTAATGT+GGG | - | chr5_4:58939342-58939361 | Msa0860280:intron | 40.0% | |
| AGTAAATTGTTAGAGGGGAG+AGG | - | chr5_4:58939538-58939557 | Msa0860280:intron | 40.0% | |
| ! | GAGGAAAATGTTAGTTTCCG+AGG | - | chr5_4:58939557-58939576 | Msa0860280:intron | 40.0% |
| TAGTTTCCGAGGATCAAACT+CGG | - | chr5_4:58939568-58939587 | Msa0860280:intron | 40.0% | |
| CTTCACCTTGAGTAGTATCT+AGG | + | chr5_4:58939869-58939888 | None:intergenic | 40.0% | |
| TACTACTCAAGGTGAAGATC+AGG | - | chr5_4:58939872-58939891 | Msa0860280:intron | 40.0% | |
| !! | CGCAAGTATAGTGGATATCT+AGG | - | chr5_4:58939915-58939934 | Msa0860280:CDS | 40.0% |
| ! | TTACAAATGGCCTTACCCAT+CGG | - | chr5_4:58940028-58940047 | Msa0860280:intron | 40.0% |
| AGAATAGTTACCGATGGGTA+AGG | + | chr5_4:58940041-58940060 | None:intergenic | 40.0% | |
| !! | TTCTGCAAGTGCTTGCTTTT+GGG | + | chr5_4:58940887-58940906 | None:intergenic | 40.0% |
| ! | ATTCTGCAAGTGCTTGCTTT+TGG | + | chr5_4:58940888-58940907 | None:intergenic | 40.0% |
| TTAATCAGAGAAAACGCCAC+TGG | - | chr5_4:58940947-58940966 | Msa0860280:five_prime_UTR | 40.0% | |
| GCAAATTGCATATCCTCAGA+AGG | + | chr5_4:58940976-58940995 | None:intergenic | 40.0% | |
| !! | GGATATGCAATTTGCTGTGA+TGG | - | chr5_4:58940981-58941000 | Msa0860280:five_prime_UTR | 40.0% |
| GGATGCCACAAATTACTACA+TGG | - | chr5_4:58941002-58941021 | Msa0860280:five_prime_UTR | 40.0% | |
| ATGAATCTCACTGCCCTTCT+TGG | + | chr5_4:58936366-58936385 | None:intergenic | 45.0% | |
| GTGTGGGGACTAAGCAAAAT+AGG | - | chr5_4:58936808-58936827 | Msa0860280:intron | 45.0% | |
| TCAGGACCTTCAAGCAATTG+AGG | + | chr5_4:58937187-58937206 | None:intergenic | 45.0% | |
| TCTAAGCTAGCTACCACTTC+AGG | + | chr5_4:58937516-58937535 | None:intergenic | 45.0% | |
| ! | TGAAGTGGTAGCTAGCTTAG+AGG | - | chr5_4:58937515-58937534 | Msa0860280:intron | 45.0% |
| TCCAGGTTTGGATCAGTTCA+TGG | - | chr5_4:58937614-58937633 | Msa0860280:CDS | 45.0% | |
| TCCATGAACTGATCCAAACC+TGG | + | chr5_4:58937618-58937637 | None:intergenic | 45.0% | |
| AGGTTTGGATCAGTTCATGG+AGG | - | chr5_4:58937617-58937636 | Msa0860280:CDS | 45.0% | |
| AGGGCCATCTCACTAATTCT+TGG | + | chr5_4:58938032-58938051 | None:intergenic | 45.0% | |
| ! | GGATCCAAGGTGTTTGAACT+AGG | - | chr5_4:58938127-58938146 | Msa0860280:intron | 45.0% |
| CGACAAAGGATGACAAGACA+TGG | + | chr5_4:58938682-58938701 | None:intergenic | 45.0% | |
| ! | AGTTTAGTTTCCAGTGGTGG+AGG | - | chr5_4:58938799-58938818 | Msa0860280:intron | 45.0% |
| TTAGGGGATGATTGGCAATG+TGG | - | chr5_4:58939176-58939195 | Msa0860280:intron | 45.0% | |
| TAGGGGATGATTGGCAATGT+GGG | - | chr5_4:58939177-58939196 | Msa0860280:intron | 45.0% | |
| TTGTGTCCCACATTAGTGTG+AGG | + | chr5_4:58939351-58939370 | None:intergenic | 45.0% | |
| ATGTAATCATTGTCCGGCGT+AGG | + | chr5_4:58939642-58939661 | None:intergenic | 45.0% | |
| CAGCTTCTACGCAAGTATAG+TGG | - | chr5_4:58939906-58939925 | Msa0860280:CDS | 45.0% | |
| CTCGACAGCAACTACTTGAT+TGG | - | chr5_4:58939994-58940013 | Msa0860280:CDS | 45.0% | |
| GACAGCAACTACTTGATTGG+TGG | - | chr5_4:58939997-58940016 | Msa0860280:CDS | 45.0% | |
| AACTACTTGATTGGTGGAGC+AGG | - | chr5_4:58940003-58940022 | Msa0860280:CDS | 45.0% | |
| TAATGTTAACCGATGCCCCT+GGG | + | chr5_4:58940535-58940554 | None:intergenic | 45.0% | |
| GATGTGCAAGCCATTTCCTA+TGG | - | chr5_4:58941032-58941051 | Msa0860280:five_prime_UTR | 45.0% | |
| GGCATAGCATCCATAGGAAA+TGG | + | chr5_4:58941045-58941064 | None:intergenic | 45.0% | |
| AGCATAGGCATAGCATCCAT+AGG | + | chr5_4:58941051-58941070 | None:intergenic | 45.0% | |
| !! | AGGGTTTTGCATGAGTTGAG+AGG | + | chr5_4:58941090-58941109 | None:intergenic | 45.0% |
| TGTAGAGTTCAGGGATAGTG+TGG | + | chr5_4:58941211-58941230 | None:intergenic | 45.0% | |
| !! | CTTCAATTCCGGGAGTACTC+TGG | - | chr5_4:58936748-58936767 | Msa0860280:CDS | 50.0% |
| GACAAGAGACGAGGAAAGAG+AGG | + | chr5_4:58937158-58937177 | None:intergenic | 50.0% | |
| AGGTAAGAGGACAAGAGACG+AGG | + | chr5_4:58937167-58937186 | None:intergenic | 50.0% | |
| AAGCTAGCTACCACTTCAGG+AGG | + | chr5_4:58937513-58937532 | None:intergenic | 50.0% | |
| AATGGCTCTTCAGGAAGGAC+AGG | - | chr5_4:58937564-58937583 | Msa0860280:intron | 50.0% | |
| AACCCTCTAGTTACTAGGGC+AGG | - | chr5_4:58937961-58937980 | Msa0860280:intron | 50.0% | |
| ACCCTCTAGTTACTAGGGCA+GGG | - | chr5_4:58937962-58937981 | Msa0860280:intron | 50.0% | |
| AATGTGGGACACGAGTGGAT+TGG | - | chr5_4:58939192-58939211 | Msa0860280:intron | 50.0% | |
| GAGGTTCCGAGTTTGATCCT+CGG | + | chr5_4:58939577-58939596 | None:intergenic | 50.0% | |
| !! | TAGCTCGGTTGGTGAGCTAA+GGG | + | chr5_4:58939619-58939638 | None:intergenic | 50.0% |
| AGTTGCTGTCGAGCTTCCTT+TGG | + | chr5_4:58939987-58940006 | None:intergenic | 50.0% | |
| GGTGGAGCAGGCATTACAAA+TGG | - | chr5_4:58940015-58940034 | Msa0860280:intron | 50.0% | |
| ! | TAATCAATGCCCAGGGGCAT+CGG | - | chr5_4:58940523-58940542 | Msa0860280:CDS | 50.0% |
| GTAATGTTAACCGATGCCCC+TGG | + | chr5_4:58940536-58940555 | None:intergenic | 50.0% | |
| CAAGCACTTGCAGAATCCAC+AGG | - | chr5_4:58940892-58940911 | Msa0860280:five_prime_UTR | 50.0% | |
| CTGCTTCAAATCTAGGCCTG+TGG | + | chr5_4:58940911-58940930 | None:intergenic | 50.0% | |
| TATCCTCAGAAGGCTTCCAG+TGG | + | chr5_4:58940966-58940985 | None:intergenic | 50.0% | |
| TGCAGGTGGAGACAGAGAGA+GGG | + | chr5_4:58936455-58936474 | None:intergenic | 55.0% | |
| TTGCAGGTGGAGACAGAGAG+AGG | + | chr5_4:58936456-58936475 | None:intergenic | 55.0% | |
| CCCCTGCCCTAGTAACTAGA+GGG | + | chr5_4:58937966-58937985 | None:intergenic | 55.0% | |
| CCCTCTAGTTACTAGGGCAG+GGG | - | chr5_4:58937963-58937982 | Msa0860280:intron | 55.0% | |
| CCTCTAGTTACTAGGGCAGG+GGG | - | chr5_4:58937964-58937983 | Msa0860280:intron | 55.0% | |
| CGGCCAACTCTGGATTACCA+GGG | + | chr5_4:58937990-58938009 | None:intergenic | 55.0% | |
| ACGGCCAACTCTGGATTACC+AGG | + | chr5_4:58937991-58938010 | None:intergenic | 55.0% | |
| GTAATCCAGAGTTGGCCGTG+AGG | - | chr5_4:58937992-58938011 | Msa0860280:intron | 55.0% | |
| ACTTACCTCACGGCCAACTC+TGG | + | chr5_4:58938000-58938019 | None:intergenic | 55.0% | |
| ! | TAGTTTCCAGTGGTGGAGGC+AGG | - | chr5_4:58938803-58938822 | Msa0860280:intron | 55.0% |
| ! | AGTTTCCAGTGGTGGAGGCA+GGG | - | chr5_4:58938804-58938823 | Msa0860280:intron | 55.0% |
| TTGGCAATGTGGGACACGAG+TGG | - | chr5_4:58939187-58939206 | Msa0860280:intron | 55.0% | |
| !! | GTAGCTCGGTTGGTGAGCTA+AGG | + | chr5_4:58939620-58939639 | None:intergenic | 55.0% |
| ATTGTCCGGCGTAGGTAGCT+CGG | + | chr5_4:58939634-58939653 | None:intergenic | 55.0% | |
| ! | GGTTGGAGCACCTCCTGAAG+TGG | - | chr5_4:58937500-58937519 | Msa0860280:intron | 60.0% |
| CCCCCTGCCCTAGTAACTAG+AGG | + | chr5_4:58937967-58937986 | None:intergenic | 60.0% | |
| GGGCCCTGGTAATCCAGAGT+TGG | - | chr5_4:58937984-58938003 | Msa0860280:intron | 60.0% | |
| ! | GTTTCCAGTGGTGGAGGCAG+GGG | - | chr5_4:58938805-58938824 | Msa0860280:intron | 60.0% |
| ACCAACCGAGCTACCTACGC+CGG | - | chr5_4:58939626-58939645 | Msa0860280:intron | 60.0% | |
| ACGCCACTGGAAGCCTTCTG+AGG | - | chr5_4:58940960-58940979 | Msa0860280:five_prime_UTR | 60.0% | |
| GTAACCCCTGCCTCCACCAC+TGG | + | chr5_4:58938812-58938831 | None:intergenic | 65.0% | |
| TCCGGCGTAGGTAGCTCGGT+TGG | + | chr5_4:58939630-58939649 | None:intergenic | 65.0% | |
| GTTACTAGGGCAGGGGGCCC+TGG | - | chr5_4:58937970-58937989 | Msa0860280:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 58936351 | 58941298 | 58936351 | ID=Msa0860280;Name=Msa0860280 |
| chr5_4 | mRNA | 58936351 | 58941298 | 58936351 | ID=Msa0860280-mRNA-1;Parent=Msa0860280;Name=Msa0860280-mRNA-1;_AED=0.02;_eAED=0.02;_QI=514|0.8|0.66|1|0.6|0.5|6|221|295 |
| chr5_4 | exon | 58936351 | 58936769 | 58936351 | ID=Msa0860280-mRNA-1:exon:18028;Parent=Msa0860280-mRNA-1 |
| chr5_4 | exon | 58937600 | 58937835 | 58937600 | ID=Msa0860280-mRNA-1:exon:18027;Parent=Msa0860280-mRNA-1 |
| chr5_4 | exon | 58939890 | 58940030 | 58939890 | ID=Msa0860280-mRNA-1:exon:18026;Parent=Msa0860280-mRNA-1 |
| chr5_4 | exon | 58940043 | 58940148 | 58940043 | ID=Msa0860280-mRNA-1:exon:18025;Parent=Msa0860280-mRNA-1 |
| chr5_4 | exon | 58940450 | 58940691 | 58940450 | ID=Msa0860280-mRNA-1:exon:18024;Parent=Msa0860280-mRNA-1 |
| chr5_4 | exon | 58940820 | 58941298 | 58940820 | ID=Msa0860280-mRNA-1:exon:18023;Parent=Msa0860280-mRNA-1 |
| chr5_4 | five_prime_UTR | 58940820 | 58941298 | 58940820 | ID=Msa0860280-mRNA-1:five_prime_utr;Parent=Msa0860280-mRNA-1 |
| chr5_4 | five_prime_UTR | 58940657 | 58940691 | 58940657 | ID=Msa0860280-mRNA-1:five_prime_utr;Parent=Msa0860280-mRNA-1 |
| chr5_4 | CDS | 58940450 | 58940656 | 58940450 | ID=Msa0860280-mRNA-1:cds;Parent=Msa0860280-mRNA-1 |
| chr5_4 | CDS | 58940043 | 58940148 | 58940043 | ID=Msa0860280-mRNA-1:cds;Parent=Msa0860280-mRNA-1 |
| chr5_4 | CDS | 58939890 | 58940030 | 58939890 | ID=Msa0860280-mRNA-1:cds;Parent=Msa0860280-mRNA-1 |
| chr5_4 | CDS | 58937600 | 58937835 | 58937600 | ID=Msa0860280-mRNA-1:cds;Parent=Msa0860280-mRNA-1 |
| chr5_4 | CDS | 58936572 | 58936769 | 58936572 | ID=Msa0860280-mRNA-1:cds;Parent=Msa0860280-mRNA-1 |
| chr5_4 | three_prime_UTR | 58936351 | 58936571 | 58936351 | ID=Msa0860280-mRNA-1:three_prime_utr;Parent=Msa0860280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
