Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220420 | XP_013465058.1 | 95.076 | 264 | 13 | 0 | 1 | 264 | 1 | 264 | 0.0 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220420 | sp|Q94K41|SDR3B_ARATH | 61.176 | 255 | 99 | 0 | 1 | 255 | 1 | 255 | 2.56e-110 | 321 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220420 | A0A072VCB0 | 95.076 | 264 | 13 | 0 | 1 | 264 | 1 | 264 | 0.0 | 513 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029900 | Msa0220420 | 0.801495 | 8.766810e-49 | -8.615850e-47 |
| Msa0029910 | Msa0220420 | 0.831680 | 1.455167e-55 | -8.615850e-47 |
| Msa0077120 | Msa0220420 | 0.847685 | 9.891703e-60 | -8.615850e-47 |
| Msa0077130 | Msa0220420 | 0.804782 | 1.830731e-49 | -8.615850e-47 |
| Msa0169860 | Msa0220420 | 0.802305 | 5.975419e-49 | -8.615850e-47 |
| Msa0169920 | Msa0220420 | 0.814586 | 1.429049e-51 | -8.615850e-47 |
| Msa0170090 | Msa0220420 | 0.810509 | 1.112868e-50 | -8.615850e-47 |
| Msa0197930 | Msa0220420 | 0.806674 | 7.334103e-50 | -8.615850e-47 |
| Msa0220420 | Msa0261640 | 0.923082 | 4.239081e-89 | -8.615850e-47 |
| Msa0220420 | Msa0299550 | 0.923162 | 3.816484e-89 | -8.615850e-47 |
| Msa0220420 | Msa0317510 | 0.813336 | 2.694544e-51 | -8.615850e-47 |
| Msa0220420 | Msa0322830 | 0.804734 | 1.874098e-49 | -8.615850e-47 |
| Msa0220420 | Msa0322840 | 0.800070 | 1.712674e-48 | -8.615850e-47 |
| Msa0220420 | Msa0322860 | 0.806220 | 9.144854e-50 | -8.615850e-47 |
| Msa0220420 | Msa0333920 | 0.810310 | 1.228376e-50 | -8.615850e-47 |
| Msa0220420 | Msa0334040 | 0.804520 | 2.076773e-49 | -8.615850e-47 |
| Msa0220420 | Msa0337040 | 0.890470 | 9.574824e-74 | -8.615850e-47 |
| Msa0220420 | Msa0452920 | 0.805825 | 1.107371e-49 | -8.615850e-47 |
| Msa0220420 | Msa0545310 | 0.822646 | 2.119377e-53 | -8.615850e-47 |
| Msa0220420 | Msa0641360 | 0.825979 | 3.487579e-54 | -8.615850e-47 |
| Msa0220420 | Msa0679830 | 0.835847 | 1.321837e-56 | -8.615850e-47 |
| Msa0220420 | Msa0707220 | 0.813123 | 3.000980e-51 | -8.615850e-47 |
| Msa0220420 | Msa0737190 | 0.813309 | 2.732200e-51 | -8.615850e-47 |
| Msa0220420 | Msa0816450 | 0.802676 | 5.010114e-49 | -8.615850e-47 |
| Msa0220420 | Msa0941820 | 0.803244 | 3.823065e-49 | -8.615850e-47 |
| Msa0220420 | Msa1032450 | 0.810717 | 1.003044e-50 | -8.615850e-47 |
| Msa0220420 | Msa1037920 | 0.800212 | 1.602134e-48 | -8.615850e-47 |
| Msa0220420 | Msa1041530 | 0.812196 | 4.788282e-51 | -8.615850e-47 |
| Msa0220420 | Msa1042670 | 0.800809 | 1.211067e-48 | -8.615850e-47 |
| Msa0220420 | Msa1127140 | 0.815649 | 8.294841e-52 | -8.615850e-47 |
| Msa0220420 | Msa1166400 | 0.808508 | 2.991705e-50 | -8.615850e-47 |
| Msa0220420 | Msa1169990 | 0.833923 | 4.035161e-56 | -8.615850e-47 |
| Msa0220420 | Msa1179280 | 0.839382 | 1.638695e-57 | -8.615850e-47 |
| Msa0220420 | Msa1201110 | 0.822504 | 2.286337e-53 | -8.615850e-47 |
| Msa0220420 | Msa1233560 | 0.822905 | 1.844687e-53 | -8.615850e-47 |
| Msa0220420 | Msa1260610 | 0.811188 | 7.930993e-51 | -8.615850e-47 |
| Msa0220420 | Msa1275820 | 0.831994 | 1.217631e-55 | -8.615850e-47 |
| Msa0220420 | Msa1293750 | 0.800583 | 1.346490e-48 | -8.615850e-47 |
| Msa0220420 | Msa1305510 | 0.802120 | 6.524166e-49 | -8.615850e-47 |
| Msa0220420 | Msa1313970 | 0.842102 | 3.172985e-58 | -8.615850e-47 |
| Msa0220420 | Msa1420060 | 0.807559 | 4.765078e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220420 | MtrunA17_Chr2g0324021 | 95.076 | 264 | 13 | 0 | 1 | 264 | 1 | 264 | 0.0 | 513 |
| Msa0220420 | MtrunA17_Chr7g0270441 | 81.203 | 266 | 48 | 2 | 1 | 264 | 1 | 266 | 3.65e-154 | 430 |
| Msa0220420 | MtrunA17_Chr7g0270451 | 69.732 | 261 | 78 | 1 | 1 | 261 | 1 | 260 | 2.39e-131 | 372 |
| Msa0220420 | MtrunA17_Chr7g0270471 | 83.108 | 148 | 25 | 0 | 112 | 259 | 1 | 148 | 2.39e-85 | 251 |
| Msa0220420 | MtrunA17_Chr6g0459261 | 50.199 | 251 | 123 | 2 | 5 | 253 | 24 | 274 | 4.75e-85 | 255 |
| Msa0220420 | MtrunA17_Chr7g0266981 | 50.980 | 255 | 123 | 2 | 3 | 256 | 10 | 263 | 1.38e-81 | 246 |
| Msa0220420 | MtrunA17_Chr7g0244061 | 50.179 | 279 | 115 | 5 | 2 | 259 | 25 | 300 | 7.31e-81 | 245 |
| Msa0220420 | MtrunA17_Chr6g0459351 | 50.593 | 253 | 123 | 2 | 2 | 252 | 9 | 261 | 8.71e-81 | 244 |
| Msa0220420 | MtrunA17_Chr6g0459281 | 51.600 | 250 | 119 | 2 | 5 | 252 | 12 | 261 | 1.45e-80 | 243 |
| Msa0220420 | MtrunA17_Chr4g0044111 | 50.588 | 255 | 124 | 2 | 3 | 256 | 10 | 263 | 3.04e-80 | 243 |
| Msa0220420 | MtrunA17_Chr6g0459331 | 50.198 | 253 | 124 | 2 | 5 | 255 | 12 | 264 | 3.88e-80 | 242 |
| Msa0220420 | MtrunA17_Chr6g0459271 | 49.004 | 251 | 126 | 2 | 5 | 253 | 12 | 262 | 2.33e-78 | 238 |
| Msa0220420 | MtrunA17_Chr4g0026001 | 50.588 | 255 | 121 | 3 | 4 | 257 | 12 | 262 | 7.42e-78 | 236 |
| Msa0220420 | MtrunA17_Chr6g0459301 | 46.850 | 254 | 133 | 2 | 2 | 253 | 10 | 263 | 9.78e-78 | 236 |
| Msa0220420 | MtrunA17_Chr7g0266891 | 50.000 | 252 | 124 | 2 | 6 | 256 | 7 | 257 | 1.40e-77 | 236 |
| Msa0220420 | MtrunA17_Chr4g0025971 | 50.196 | 255 | 120 | 4 | 4 | 256 | 12 | 261 | 4.37e-77 | 234 |
| Msa0220420 | MtrunA17_Chr4g0025981 | 50.598 | 251 | 119 | 4 | 7 | 256 | 42 | 288 | 4.11e-75 | 231 |
| Msa0220420 | MtrunA17_Chr6g0463951 | 63.743 | 171 | 62 | 0 | 87 | 257 | 1 | 171 | 3.33e-73 | 221 |
| Msa0220420 | MtrunA17_Chr4g0044131 | 47.328 | 262 | 135 | 3 | 4 | 263 | 6 | 266 | 3.55e-72 | 222 |
| Msa0220420 | MtrunA17_Chr7g0268591 | 45.703 | 256 | 131 | 4 | 4 | 253 | 31 | 284 | 9.37e-72 | 222 |
| Msa0220420 | MtrunA17_Chr7g0252031 | 46.241 | 266 | 133 | 6 | 4 | 261 | 33 | 296 | 4.30e-71 | 220 |
| Msa0220420 | MtrunA17_Chr4g0040371 | 43.223 | 273 | 142 | 5 | 1 | 264 | 14 | 282 | 5.80e-64 | 201 |
| Msa0220420 | MtrunA17_Chr7g0267001 | 45.211 | 261 | 124 | 4 | 4 | 263 | 6 | 248 | 1.45e-62 | 197 |
| Msa0220420 | MtrunA17_Chr3g0084871 | 43.494 | 269 | 141 | 5 | 4 | 263 | 14 | 280 | 5.15e-62 | 196 |
| Msa0220420 | MtrunA17_Chr7g0267011 | 48.677 | 189 | 95 | 2 | 4 | 191 | 6 | 193 | 1.03e-53 | 172 |
| Msa0220420 | MtrunA17_Chr7g0270461 | 84.946 | 93 | 14 | 0 | 4 | 96 | 44 | 136 | 1.23e-50 | 162 |
| Msa0220420 | MtrunA17_Chr7g0266991 | 42.424 | 231 | 114 | 3 | 4 | 233 | 23 | 235 | 9.25e-49 | 161 |
| Msa0220420 | MtrunA17_Chr4g0044121 | 47.953 | 171 | 87 | 2 | 87 | 256 | 1 | 170 | 7.83e-44 | 146 |
| Msa0220420 | MtrunA17_Chr3g0142651 | 48.718 | 117 | 58 | 2 | 87 | 202 | 1 | 116 | 1.22e-30 | 111 |
| Msa0220420 | MtrunA17_Chr4g0028921 | 30.545 | 275 | 153 | 6 | 1 | 251 | 1 | 261 | 3.30e-25 | 100 |
| Msa0220420 | MtrunA17_Chr4g0028911 | 29.496 | 278 | 158 | 6 | 1 | 254 | 1 | 264 | 6.53e-22 | 92.0 |
| Msa0220420 | MtrunA17_Chr3g0122901 | 27.132 | 258 | 167 | 9 | 4 | 252 | 73 | 318 | 6.67e-21 | 90.1 |
| Msa0220420 | MtrunA17_Chr4g0074511 | 27.863 | 262 | 163 | 8 | 5 | 251 | 39 | 289 | 3.44e-20 | 87.8 |
| Msa0220420 | MtrunA17_Chr7g0272961 | 26.316 | 266 | 170 | 7 | 5 | 256 | 39 | 292 | 5.56e-20 | 87.0 |
| Msa0220420 | MtrunA17_Chr1g0191751 | 29.537 | 281 | 142 | 12 | 5 | 256 | 100 | 353 | 1.65e-19 | 86.7 |
| Msa0220420 | MtrunA17_Chr4g0075531 | 27.778 | 252 | 171 | 5 | 4 | 252 | 5 | 248 | 4.20e-19 | 84.0 |
| Msa0220420 | MtrunA17_Chr0c30g0494101 | 27.757 | 263 | 160 | 9 | 5 | 251 | 39 | 287 | 6.21e-18 | 81.3 |
| Msa0220420 | MtrunA17_Chr1g0171831 | 30.612 | 196 | 124 | 4 | 4 | 187 | 12 | 207 | 1.37e-15 | 74.3 |
| Msa0220420 | MtrunA17_Chr3g0112151 | 26.357 | 258 | 178 | 7 | 2 | 254 | 82 | 332 | 5.95e-15 | 73.6 |
| Msa0220420 | MtrunA17_Chr3g0112171 | 27.341 | 267 | 173 | 8 | 6 | 263 | 15 | 269 | 1.08e-14 | 72.0 |
| Msa0220420 | MtrunA17_Chr3g0112141 | 26.482 | 253 | 174 | 7 | 6 | 253 | 17 | 262 | 1.19e-14 | 72.0 |
| Msa0220420 | MtrunA17_Chr8g0357481 | 28.358 | 268 | 172 | 10 | 6 | 260 | 14 | 274 | 2.10e-14 | 71.6 |
| Msa0220420 | MtrunA17_Chr7g0259531 | 30.469 | 256 | 162 | 8 | 6 | 252 | 11 | 259 | 2.55e-14 | 70.9 |
| Msa0220420 | MtrunA17_Chr7g0259521 | 27.881 | 269 | 170 | 9 | 1 | 256 | 1 | 258 | 5.74e-14 | 70.1 |
| Msa0220420 | MtrunA17_Chr3g0112271 | 28.839 | 267 | 179 | 9 | 1 | 263 | 12 | 271 | 7.08e-14 | 69.7 |
| Msa0220420 | MtrunA17_Chr7g0239491 | 28.736 | 261 | 169 | 9 | 2 | 253 | 11 | 263 | 7.22e-14 | 69.7 |
| Msa0220420 | MtrunA17_Chr4g0045061 | 26.744 | 258 | 154 | 6 | 8 | 248 | 6 | 245 | 2.94e-13 | 69.3 |
| Msa0220420 | MtrunA17_Chr3g0112261 | 27.626 | 257 | 176 | 9 | 3 | 255 | 16 | 266 | 5.37e-13 | 67.4 |
| Msa0220420 | MtrunA17_Chr3g0124481 | 33.094 | 139 | 87 | 3 | 56 | 192 | 59 | 193 | 1.06e-12 | 66.6 |
| Msa0220420 | MtrunA17_Chr4g0045041 | 27.536 | 207 | 128 | 4 | 8 | 197 | 6 | 207 | 1.30e-12 | 67.4 |
| Msa0220420 | MtrunA17_Chr7g0239481 | 29.771 | 262 | 164 | 9 | 2 | 252 | 11 | 263 | 4.28e-12 | 64.7 |
| Msa0220420 | MtrunA17_Chr7g0239501 | 27.376 | 263 | 173 | 9 | 2 | 254 | 12 | 266 | 1.48e-11 | 63.2 |
| Msa0220420 | MtrunA17_Chr4g0032181 | 24.324 | 222 | 151 | 6 | 38 | 254 | 38 | 247 | 4.18e-11 | 61.6 |
| Msa0220420 | MtrunA17_Chr4g0032141 | 26.070 | 257 | 178 | 8 | 3 | 254 | 53 | 302 | 5.71e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220420 | AT2G47140.1 | 61.176 | 255 | 99 | 0 | 1 | 255 | 1 | 255 | 2.60e-111 | 321 |
| Msa0220420 | AT2G47130.1 | 58.687 | 259 | 100 | 2 | 1 | 256 | 1 | 255 | 3.50e-102 | 298 |
| Msa0220420 | AT3G29250.2 | 58.462 | 260 | 100 | 2 | 1 | 256 | 1 | 256 | 5.32e-102 | 298 |
| Msa0220420 | AT3G29250.3 | 58.462 | 260 | 100 | 2 | 1 | 256 | 37 | 292 | 1.32e-101 | 298 |
| Msa0220420 | AT3G29250.1 | 58.140 | 258 | 100 | 2 | 3 | 256 | 41 | 294 | 1.41e-100 | 295 |
| Msa0220420 | AT2G47120.1 | 56.538 | 260 | 103 | 4 | 1 | 256 | 1 | 254 | 2.06e-100 | 294 |
| Msa0220420 | AT3G29260.1 | 57.529 | 259 | 103 | 2 | 1 | 256 | 1 | 255 | 1.80e-99 | 291 |
| Msa0220420 | AT2G47120.2 | 56.641 | 256 | 101 | 4 | 5 | 256 | 6 | 255 | 1.88e-99 | 291 |
| Msa0220420 | AT3G51680.1 | 48.529 | 272 | 124 | 3 | 4 | 259 | 30 | 301 | 2.50e-76 | 234 |
| Msa0220420 | AT3G26770.1 | 43.284 | 268 | 140 | 5 | 4 | 261 | 39 | 304 | 2.95e-64 | 203 |
| Msa0220420 | AT4G03140.1 | 43.798 | 258 | 137 | 4 | 4 | 255 | 76 | 331 | 1.18e-62 | 200 |
| Msa0220420 | AT1G52340.1 | 45.693 | 267 | 127 | 6 | 4 | 256 | 16 | 278 | 4.49e-62 | 197 |
| Msa0220420 | AT3G26760.1 | 40.000 | 270 | 150 | 5 | 2 | 261 | 32 | 299 | 8.70e-61 | 194 |
| Msa0220420 | AT3G42960.1 | 44.061 | 261 | 134 | 3 | 2 | 253 | 4 | 261 | 1.58e-54 | 177 |
| Msa0220420 | AT2G47150.1 | 37.052 | 251 | 105 | 7 | 6 | 256 | 1 | 198 | 1.65e-37 | 131 |
| Msa0220420 | AT3G55290.2 | 28.682 | 258 | 165 | 5 | 6 | 251 | 17 | 267 | 6.91e-21 | 89.7 |
| Msa0220420 | AT3G55290.1 | 28.682 | 258 | 165 | 5 | 6 | 251 | 18 | 268 | 7.54e-21 | 89.7 |
| Msa0220420 | AT1G07450.1 | 28.736 | 261 | 169 | 7 | 1 | 254 | 3 | 253 | 4.74e-20 | 87.0 |
| Msa0220420 | AT1G62610.1 | 29.231 | 260 | 162 | 6 | 6 | 251 | 14 | 265 | 5.84e-20 | 87.0 |
| Msa0220420 | AT1G62610.2 | 29.231 | 260 | 162 | 6 | 6 | 251 | 13 | 264 | 5.93e-20 | 87.0 |
| Msa0220420 | AT1G62610.3 | 29.231 | 260 | 162 | 6 | 6 | 251 | 15 | 266 | 6.56e-20 | 87.0 |
| Msa0220420 | AT1G62610.4 | 29.231 | 260 | 162 | 6 | 6 | 251 | 19 | 270 | 8.36e-20 | 86.7 |
| Msa0220420 | AT2G29310.1 | 27.778 | 270 | 157 | 8 | 3 | 254 | 4 | 253 | 1.24e-18 | 83.2 |
| Msa0220420 | AT3G55310.1 | 29.057 | 265 | 155 | 7 | 6 | 251 | 17 | 267 | 1.29e-18 | 83.6 |
| Msa0220420 | AT2G29340.2 | 28.788 | 264 | 162 | 8 | 3 | 254 | 4 | 253 | 1.34e-18 | 83.2 |
| Msa0220420 | AT2G29340.1 | 28.788 | 264 | 162 | 8 | 3 | 254 | 4 | 253 | 2.30e-18 | 83.2 |
| Msa0220420 | AT4G05530.1 | 30.315 | 254 | 162 | 7 | 4 | 252 | 7 | 250 | 3.19e-18 | 82.0 |
| Msa0220420 | AT1G63380.3 | 27.099 | 262 | 171 | 5 | 6 | 254 | 15 | 269 | 3.36e-18 | 82.4 |
| Msa0220420 | AT1G63380.2 | 27.099 | 262 | 171 | 5 | 6 | 254 | 22 | 276 | 3.40e-18 | 82.4 |
| Msa0220420 | AT1G63380.1 | 27.099 | 262 | 171 | 5 | 6 | 254 | 17 | 271 | 3.97e-18 | 82.0 |
| Msa0220420 | AT1G63380.4 | 27.099 | 262 | 171 | 5 | 6 | 254 | 19 | 273 | 4.08e-18 | 82.0 |
| Msa0220420 | AT3G46170.1 | 26.744 | 258 | 170 | 5 | 6 | 251 | 26 | 276 | 5.80e-18 | 82.0 |
| Msa0220420 | AT1G24360.1 | 25.194 | 258 | 176 | 8 | 4 | 254 | 72 | 319 | 2.37e-17 | 80.5 |
| Msa0220420 | AT2G29150.1 | 28.185 | 259 | 171 | 7 | 2 | 254 | 12 | 261 | 9.33e-17 | 78.2 |
| Msa0220420 | AT2G17845.1 | 27.547 | 265 | 170 | 6 | 6 | 255 | 47 | 304 | 1.01e-16 | 78.6 |
| Msa0220420 | AT1G54870.2 | 26.316 | 266 | 170 | 7 | 5 | 256 | 83 | 336 | 1.02e-16 | 79.0 |
| Msa0220420 | AT1G54870.1 | 26.316 | 266 | 170 | 7 | 5 | 256 | 81 | 334 | 1.07e-16 | 79.0 |
| Msa0220420 | AT2G30670.1 | 26.744 | 258 | 175 | 6 | 3 | 254 | 4 | 253 | 3.59e-16 | 76.6 |
| Msa0220420 | AT5G06060.1 | 29.457 | 258 | 168 | 8 | 3 | 254 | 6 | 255 | 3.69e-16 | 76.6 |
| Msa0220420 | AT2G29290.2 | 27.652 | 264 | 165 | 6 | 3 | 254 | 4 | 253 | 4.75e-16 | 76.3 |
| Msa0220420 | AT1G07440.1 | 27.451 | 255 | 176 | 7 | 3 | 254 | 9 | 257 | 8.48e-16 | 75.5 |
| Msa0220420 | AT3G05260.1 | 27.273 | 264 | 166 | 8 | 5 | 254 | 36 | 287 | 6.28e-15 | 73.6 |
| Msa0220420 | AT2G29350.1 | 27.027 | 259 | 174 | 7 | 2 | 254 | 11 | 260 | 6.39e-15 | 73.2 |
| Msa0220420 | AT2G29370.1 | 27.068 | 266 | 176 | 8 | 3 | 260 | 13 | 268 | 7.03e-15 | 72.8 |
| Msa0220420 | AT2G29360.1 | 27.099 | 262 | 169 | 9 | 3 | 254 | 13 | 262 | 1.09e-14 | 72.4 |
| Msa0220420 | AT4G13180.1 | 31.801 | 261 | 156 | 10 | 6 | 254 | 13 | 263 | 2.06e-14 | 71.6 |
| Msa0220420 | AT2G29340.3 | 30.151 | 199 | 128 | 7 | 3 | 195 | 4 | 197 | 2.54e-14 | 70.1 |
| Msa0220420 | AT2G29340.4 | 30.151 | 199 | 128 | 7 | 3 | 195 | 4 | 197 | 2.54e-14 | 70.1 |
| Msa0220420 | AT2G29260.1 | 29.389 | 262 | 167 | 10 | 2 | 254 | 62 | 314 | 3.46e-14 | 71.6 |
| Msa0220420 | AT2G29290.1 | 28.000 | 200 | 138 | 4 | 56 | 254 | 42 | 236 | 5.23e-14 | 70.1 |
| Msa0220420 | AT1G49670.2 | 30.045 | 223 | 125 | 7 | 8 | 210 | 6 | 217 | 6.31e-14 | 71.6 |
| Msa0220420 | AT2G29300.2 | 27.273 | 264 | 177 | 8 | 3 | 259 | 4 | 259 | 6.57e-14 | 70.5 |
| Msa0220420 | AT1G49670.1 | 30.045 | 223 | 125 | 7 | 8 | 210 | 6 | 217 | 7.37e-14 | 71.6 |
| Msa0220420 | AT2G29300.1 | 28.185 | 259 | 171 | 9 | 3 | 254 | 4 | 254 | 7.56e-14 | 70.1 |
| Msa0220420 | AT3G12800.1 | 28.413 | 271 | 171 | 11 | 6 | 261 | 10 | 272 | 8.72e-14 | 70.1 |
| Msa0220420 | AT1G10310.1 | 33.333 | 132 | 86 | 2 | 63 | 194 | 73 | 202 | 4.82e-13 | 67.4 |
| Msa0220420 | AT2G29310.3 | 28.019 | 207 | 122 | 6 | 3 | 195 | 4 | 197 | 7.30e-13 | 66.2 |
| Msa0220420 | AT2G29330.1 | 26.562 | 256 | 178 | 6 | 3 | 254 | 4 | 253 | 1.13e-12 | 66.6 |
| Msa0220420 | AT5G50770.1 | 28.796 | 191 | 128 | 5 | 1 | 187 | 40 | 226 | 3.58e-12 | 65.9 |
| Msa0220420 | AT2G29350.3 | 26.000 | 200 | 141 | 5 | 56 | 254 | 29 | 222 | 7.38e-12 | 63.9 |
| Msa0220420 | AT2G29350.2 | 27.500 | 200 | 134 | 5 | 2 | 195 | 11 | 205 | 1.82e-11 | 62.8 |
| Msa0220420 | AT2G29310.2 | 25.862 | 232 | 152 | 7 | 32 | 254 | 31 | 251 | 2.42e-11 | 62.8 |
Find 58 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAAAATAAGCTATGTGATT+TGG | 0.275812 | 2_1:+68640941 | Msa0220420:three_prime_UTR |
| AGCAGATATCAATGATGAAT+TGG | 0.283540 | 2_1:+68640079 | Msa0220420:CDS |
| TGGTGTTGTCAAATTCATTT+AGG | 0.283555 | 2_1:-68640280 | None:intergenic |
| GCATCAAAACATGGTCTTAT+AGG | 0.284802 | 2_1:+68640443 | Msa0220420:CDS |
| CCTTGATTATGCTAATTTGC+AGG | 0.303341 | 2_1:+68640598 | Msa0220420:CDS |
| TGCAGTGAGCTTGGAGGTTA+TGG | 0.303780 | 2_1:+68640482 | Msa0220420:CDS |
| CATCATGTTGCAAATTCAAT+AGG | 0.308261 | 2_1:+68640104 | Msa0220420:CDS |
| GTAAAGATATTCGTGGAAAA+TGG | 0.310172 | 2_1:+68640041 | Msa0220420:CDS |
| TACACTGGCAGTGCAAATTA+TGG | 0.353051 | 2_1:-68640381 | None:intergenic |
| GATGAATCTGCTTATGTTAG+TGG | 0.370705 | 2_1:+68640674 | Msa0220420:CDS |
| ATGGTCTTATAGGACTTGTT+AGG | 0.392057 | 2_1:+68640453 | Msa0220420:CDS |
| GCTTTCACGTTGGAGAGATA+TGG | 0.399630 | 2_1:+68640191 | Msa0220420:CDS |
| ACTGGGGCAGCAAGCGGAAT+AGG | 0.399759 | 2_1:+68640008 | Msa0220420:CDS |
| GCCAACAGCTTCGACTTCAC+TGG | 0.415316 | 2_1:-68640576 | None:intergenic |
| ATTTGCACTGCCAGTGTAGC+TGG | 0.419113 | 2_1:+68640386 | Msa0220420:CDS |
| CAACTTGTTTCTCATCTCTC+AGG | 0.421960 | 2_1:-68640157 | None:intergenic |
| ATTGCTGAACATGATGTCTA+AGG | 0.424678 | 2_1:-68640216 | None:intergenic |
| TGATCATAGGTTGGAGGGTA+AGG | 0.428592 | 2_1:+68639974 | Msa0220420:intron |
| AATTCTAGTATGCTAGATAA+AGG | 0.435820 | 2_1:-68640254 | None:intergenic |
| ATCATGTTGCAAATTCAATA+GGG | 0.440902 | 2_1:+68640105 | Msa0220420:CDS |
| GACATCATGTTCAGCAATGC+TGG | 0.459929 | 2_1:+68640221 | Msa0220420:CDS |
| GCAGATATCAATGATGAATT+GGG | 0.463215 | 2_1:+68640080 | Msa0220420:CDS |
| GTGGCTTCTCAGTCATTAAT+CGG | 0.474841 | 2_1:+68640717 | Msa0220420:CDS |
| TTCAGCAATGCTGGTAATGC+TGG | 0.487409 | 2_1:+68640230 | Msa0220420:CDS |
| TTTGCAGGGAATTACATTGA+AGG | 0.494365 | 2_1:+68640613 | Msa0220420:CDS |
| AGAGGTGTAGCAACAGCATA+AGG | 0.501265 | 2_1:-68640527 | None:intergenic |
| GATTAAACTTAGCAAGCAAA+AGG | 0.503429 | 2_1:+68639792 | None:intergenic |
| GGTAAGGTAGCTATAGTGAC+TGG | 0.506112 | 2_1:+68639990 | Msa0220420:CDS |
| GGACACAACTTGGTCGTTGA+TGG | 0.511755 | 2_1:+68640695 | Msa0220420:CDS |
| CTTGATTATGCTAATTTGCA+GGG | 0.512554 | 2_1:+68640599 | Msa0220420:CDS |
| ACCTCTTGCATGTAGAGCAC+TGG | 0.521993 | 2_1:+68640544 | Msa0220420:CDS |
| AGAGTGAATGATAGAGAAAG+CGG | 0.526417 | 2_1:-68640786 | None:intergenic |
| CAAGCATGCTGCACGTGTAA+TGG | 0.527529 | 2_1:+68640337 | Msa0220420:CDS |
| AGGTCAACATGCAGTGAGCT+TGG | 0.540441 | 2_1:+68640473 | Msa0220420:CDS |
| CCTGCAAATTAGCATAATCA+AGG | 0.541425 | 2_1:-68640598 | None:intergenic |
| ACCAACAAAACCAGCTACAC+TGG | 0.550665 | 2_1:-68640396 | None:intergenic |
| CCCAGTGAAGTCGAAGCTGT+TGG | 0.551376 | 2_1:+68640575 | Msa0220420:CDS |
| TTATGTTAGTGGACACAACT+TGG | 0.559853 | 2_1:+68640685 | Msa0220420:CDS |
| ACCATGGCTGTGAACGTTCG+TGG | 0.565494 | 2_1:+68640299 | Msa0220420:CDS |
| CCAACAGCTTCGACTTCACT+GGG | 0.566318 | 2_1:-68640575 | None:intergenic |
| ACCACGAACGTTCACAGCCA+TGG | 0.577592 | 2_1:-68640300 | None:intergenic |
| AGAAGCAGTAAAGATATTCG+TGG | 0.578218 | 2_1:+68640034 | Msa0220420:CDS |
| TCAACATGCAGTGAGCTTGG+AGG | 0.582201 | 2_1:+68640476 | Msa0220420:CDS |
| GTAAGGTAGCTATAGTGACT+GGG | 0.582532 | 2_1:+68639991 | Msa0220420:CDS |
| CACAACTTGGTCGTTGATGG+TGG | 0.601290 | 2_1:+68640698 | Msa0220420:CDS |
| AAGGTTCATAACTCAAAGCA+AGG | 0.606203 | 2_1:+68639811 | Msa0220420:five_prime_UTR |
| TCCAGTGCTCTACATGCAAG+AGG | 0.608317 | 2_1:-68640545 | None:intergenic |
| ATAGTGACTGGGGCAGCAAG+CGG | 0.610587 | 2_1:+68640002 | Msa0220420:CDS |
| CATCTCTCAGGTCACAGTGG+TGG | 0.620723 | 2_1:-68640145 | None:intergenic |
| GGAAATTGTTGCTTTCACGT+TGG | 0.626510 | 2_1:+68640181 | Msa0220420:CDS |
| TGCATGTAGAGCACTGGACA+TGG | 0.628198 | 2_1:+68640550 | Msa0220420:CDS |
| AATCATCAATGTCAAAACAA+AGG | 0.629421 | 2_1:+68639845 | Msa0220420:exon |
| GCATGCTGCACGTGTAATGG+TGG | 0.633944 | 2_1:+68640340 | Msa0220420:CDS |
| GAGAGATGAGAAACAAGTTG+AGG | 0.635217 | 2_1:+68640160 | Msa0220420:CDS |
| GATTATACAGCATCAAAACA+TGG | 0.649473 | 2_1:+68640434 | Msa0220420:CDS |
| TCTCATCTCTCAGGTCACAG+TGG | 0.665905 | 2_1:-68640148 | None:intergenic |
| AAATGAATTTGACAACACCA+TGG | 0.674818 | 2_1:+68640283 | Msa0220420:CDS |
| TAAGGTAGCTATAGTGACTG+GGG | 0.695873 | 2_1:+68639992 | Msa0220420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTATTTTATGATCAT+AGG | + | chr2_1:68639961-68639980 | Msa0220420:intron | 10.0% |
| !!! | TTAATATTTTTTCTCTTATT+CGG | - | chr2_1:68640886-68640905 | None:intergenic | 10.0% |
| !!! | ATATTTTATTTTATGATCAT+AGG | + | chr2_1:68639961-68639980 | Msa0220420:intron | 10.0% |
| !!! | TTAATATTTTTTCTCTTATT+CGG | - | chr2_1:68640886-68640905 | None:intergenic | 10.0% |
| !!! | AGTTATCATTTTTTAATACT+AGG | - | chr2_1:68640749-68640768 | None:intergenic | 15.0% |
| !!! | AGTTATCATTTTTTAATACT+AGG | - | chr2_1:68640749-68640768 | None:intergenic | 15.0% |
| !!! | TTTATTTTATGATCATAGGT+TGG | + | chr2_1:68639965-68639984 | Msa0220420:intron | 20.0% |
| !! | ATAAAATAAGCTATGTGATT+TGG | + | chr2_1:68640941-68640960 | Msa0220420:three_prime_UTR | 20.0% |
| !!! | TTTATTTTATGATCATAGGT+TGG | + | chr2_1:68639965-68639984 | Msa0220420:intron | 20.0% |
| !! | ATAAAATAAGCTATGTGATT+TGG | + | chr2_1:68640941-68640960 | Msa0220420:three_prime_UTR | 20.0% |
| ! | AATCATCAATGTCAAAACAA+AGG | + | chr2_1:68639845-68639864 | Msa0220420:exon | 25.0% |
| ! | ATCATGTTGCAAATTCAATA+GGG | + | chr2_1:68640105-68640124 | Msa0220420:CDS | 25.0% |
| ! | AATTCTAGTATGCTAGATAA+AGG | - | chr2_1:68640257-68640276 | None:intergenic | 25.0% |
| ! | AATCATCAATGTCAAAACAA+AGG | + | chr2_1:68639845-68639864 | Msa0220420:exon | 25.0% |
| ! | ATCATGTTGCAAATTCAATA+GGG | + | chr2_1:68640105-68640124 | Msa0220420:CDS | 25.0% |
| ! | AATTCTAGTATGCTAGATAA+AGG | - | chr2_1:68640257-68640276 | None:intergenic | 25.0% |
| TGTTATAAGCCAATAGAAAC+AGG | - | chr2_1:68639927-68639946 | None:intergenic | 30.0% | |
| !! | ATTTTATGATCATAGGTTGG+AGG | + | chr2_1:68639968-68639987 | Msa0220420:intron | 30.0% |
| !! | TTTTATGATCATAGGTTGGA+GGG | + | chr2_1:68639969-68639988 | Msa0220420:intron | 30.0% |
| GTAAAGATATTCGTGGAAAA+TGG | + | chr2_1:68640041-68640060 | Msa0220420:CDS | 30.0% | |
| AGCAGATATCAATGATGAAT+TGG | + | chr2_1:68640079-68640098 | Msa0220420:CDS | 30.0% | |
| GCAGATATCAATGATGAATT+GGG | + | chr2_1:68640080-68640099 | Msa0220420:CDS | 30.0% | |
| CATCATGTTGCAAATTCAAT+AGG | + | chr2_1:68640104-68640123 | Msa0220420:CDS | 30.0% | |
| !! | TGGTGTTGTCAAATTCATTT+AGG | - | chr2_1:68640283-68640302 | None:intergenic | 30.0% |
| AAATGAATTTGACAACACCA+TGG | + | chr2_1:68640283-68640302 | Msa0220420:CDS | 30.0% | |
| GATTATACAGCATCAAAACA+TGG | + | chr2_1:68640434-68640453 | Msa0220420:CDS | 30.0% | |
| ! | CTTGATTATGCTAATTTGCA+GGG | + | chr2_1:68640599-68640618 | Msa0220420:CDS | 30.0% |
| !!! | AACGTTCTTCTTTTTTTGAG+AGG | + | chr2_1:68640979-68640998 | Msa0220420:three_prime_UTR | 30.0% |
| !!! | TCACTTTTTTGTTGTTGTTG+AGG | - | chr2_1:68641090-68641109 | None:intergenic | 30.0% |
| TGTTATAAGCCAATAGAAAC+AGG | - | chr2_1:68639927-68639946 | None:intergenic | 30.0% | |
| !! | ATTTTATGATCATAGGTTGG+AGG | + | chr2_1:68639968-68639987 | Msa0220420:intron | 30.0% |
| !! | TTTTATGATCATAGGTTGGA+GGG | + | chr2_1:68639969-68639988 | Msa0220420:intron | 30.0% |
| GTAAAGATATTCGTGGAAAA+TGG | + | chr2_1:68640041-68640060 | Msa0220420:CDS | 30.0% | |
| AGCAGATATCAATGATGAAT+TGG | + | chr2_1:68640079-68640098 | Msa0220420:CDS | 30.0% | |
| GCAGATATCAATGATGAATT+GGG | + | chr2_1:68640080-68640099 | Msa0220420:CDS | 30.0% | |
| CATCATGTTGCAAATTCAAT+AGG | + | chr2_1:68640104-68640123 | Msa0220420:CDS | 30.0% | |
| !! | TGGTGTTGTCAAATTCATTT+AGG | - | chr2_1:68640283-68640302 | None:intergenic | 30.0% |
| AAATGAATTTGACAACACCA+TGG | + | chr2_1:68640283-68640302 | Msa0220420:CDS | 30.0% | |
| GATTATACAGCATCAAAACA+TGG | + | chr2_1:68640434-68640453 | Msa0220420:CDS | 30.0% | |
| ! | CTTGATTATGCTAATTTGCA+GGG | + | chr2_1:68640599-68640618 | Msa0220420:CDS | 30.0% |
| !!! | AACGTTCTTCTTTTTTTGAG+AGG | + | chr2_1:68640979-68640998 | Msa0220420:three_prime_UTR | 30.0% |
| !!! | TCACTTTTTTGTTGTTGTTG+AGG | - | chr2_1:68641090-68641109 | None:intergenic | 30.0% |
| AAGGTTCATAACTCAAAGCA+AGG | + | chr2_1:68639811-68639830 | Msa0220420:five_prime_UTR | 35.0% | |
| AGAAGCAGTAAAGATATTCG+TGG | + | chr2_1:68640034-68640053 | Msa0220420:CDS | 35.0% | |
| ATTGCTGAACATGATGTCTA+AGG | - | chr2_1:68640219-68640238 | None:intergenic | 35.0% | |
| ! | ATGGTGGAAAGAAAAATACG+CGG | + | chr2_1:68640356-68640375 | Msa0220420:CDS | 35.0% |
| !! | GCATCAAAACATGGTCTTAT+AGG | + | chr2_1:68640443-68640462 | Msa0220420:CDS | 35.0% |
| !! | ATGGTCTTATAGGACTTGTT+AGG | + | chr2_1:68640453-68640472 | Msa0220420:CDS | 35.0% |
| CCTGCAAATTAGCATAATCA+AGG | - | chr2_1:68640601-68640620 | None:intergenic | 35.0% | |
| ! | CCTTGATTATGCTAATTTGC+AGG | + | chr2_1:68640598-68640617 | Msa0220420:CDS | 35.0% |
| TTTGCAGGGAATTACATTGA+AGG | + | chr2_1:68640613-68640632 | Msa0220420:CDS | 35.0% | |
| GATGAATCTGCTTATGTTAG+TGG | + | chr2_1:68640674-68640693 | Msa0220420:CDS | 35.0% | |
| ! | TTATGTTAGTGGACACAACT+TGG | + | chr2_1:68640685-68640704 | Msa0220420:CDS | 35.0% |
| AGAGTGAATGATAGAGAAAG+CGG | - | chr2_1:68640789-68640808 | None:intergenic | 35.0% | |
| AAGGTTCATAACTCAAAGCA+AGG | + | chr2_1:68639811-68639830 | Msa0220420:five_prime_UTR | 35.0% | |
| AGAAGCAGTAAAGATATTCG+TGG | + | chr2_1:68640034-68640053 | Msa0220420:CDS | 35.0% | |
| ATTGCTGAACATGATGTCTA+AGG | - | chr2_1:68640219-68640238 | None:intergenic | 35.0% | |
| ! | ATGGTGGAAAGAAAAATACG+CGG | + | chr2_1:68640356-68640375 | Msa0220420:CDS | 35.0% |
| !! | GCATCAAAACATGGTCTTAT+AGG | + | chr2_1:68640443-68640462 | Msa0220420:CDS | 35.0% |
| !! | ATGGTCTTATAGGACTTGTT+AGG | + | chr2_1:68640453-68640472 | Msa0220420:CDS | 35.0% |
| CCTGCAAATTAGCATAATCA+AGG | - | chr2_1:68640601-68640620 | None:intergenic | 35.0% | |
| ! | CCTTGATTATGCTAATTTGC+AGG | + | chr2_1:68640598-68640617 | Msa0220420:CDS | 35.0% |
| TTTGCAGGGAATTACATTGA+AGG | + | chr2_1:68640613-68640632 | Msa0220420:CDS | 35.0% | |
| GATGAATCTGCTTATGTTAG+TGG | + | chr2_1:68640674-68640693 | Msa0220420:CDS | 35.0% | |
| ! | TTATGTTAGTGGACACAACT+TGG | + | chr2_1:68640685-68640704 | Msa0220420:CDS | 35.0% |
| AGAGTGAATGATAGAGAAAG+CGG | - | chr2_1:68640789-68640808 | None:intergenic | 35.0% | |
| CACTGTACTAGCTAGAAAGA+GGG | - | chr2_1:68639900-68639919 | None:intergenic | 40.0% | |
| ACACTGTACTAGCTAGAAAG+AGG | - | chr2_1:68639901-68639920 | None:intergenic | 40.0% | |
| !! | CAGTGTCTACCTGTTTCTAT+TGG | + | chr2_1:68639915-68639934 | Msa0220420:intron | 40.0% |
| GTAAGGTAGCTATAGTGACT+GGG | + | chr2_1:68639991-68640010 | Msa0220420:CDS | 40.0% | |
| TAAGGTAGCTATAGTGACTG+GGG | + | chr2_1:68639992-68640011 | Msa0220420:CDS | 40.0% | |
| ! | CAACTTGTTTCTCATCTCTC+AGG | - | chr2_1:68640160-68640179 | None:intergenic | 40.0% |
| GAGAGATGAGAAACAAGTTG+AGG | + | chr2_1:68640160-68640179 | Msa0220420:CDS | 40.0% | |
| !! | GGAAATTGTTGCTTTCACGT+TGG | + | chr2_1:68640181-68640200 | Msa0220420:CDS | 40.0% |
| TACACTGGCAGTGCAAATTA+TGG | - | chr2_1:68640384-68640403 | None:intergenic | 40.0% | |
| GTGGCTTCTCAGTCATTAAT+CGG | + | chr2_1:68640717-68640736 | Msa0220420:CDS | 40.0% | |
| CACTGTACTAGCTAGAAAGA+GGG | - | chr2_1:68639900-68639919 | None:intergenic | 40.0% | |
| ACACTGTACTAGCTAGAAAG+AGG | - | chr2_1:68639901-68639920 | None:intergenic | 40.0% | |
| !! | CAGTGTCTACCTGTTTCTAT+TGG | + | chr2_1:68639915-68639934 | Msa0220420:intron | 40.0% |
| GTAAGGTAGCTATAGTGACT+GGG | + | chr2_1:68639991-68640010 | Msa0220420:CDS | 40.0% | |
| TAAGGTAGCTATAGTGACTG+GGG | + | chr2_1:68639992-68640011 | Msa0220420:CDS | 40.0% | |
| ! | CAACTTGTTTCTCATCTCTC+AGG | - | chr2_1:68640160-68640179 | None:intergenic | 40.0% |
| GAGAGATGAGAAACAAGTTG+AGG | + | chr2_1:68640160-68640179 | Msa0220420:CDS | 40.0% | |
| !! | GGAAATTGTTGCTTTCACGT+TGG | + | chr2_1:68640181-68640200 | Msa0220420:CDS | 40.0% |
| TACACTGGCAGTGCAAATTA+TGG | - | chr2_1:68640384-68640403 | None:intergenic | 40.0% | |
| GTGGCTTCTCAGTCATTAAT+CGG | + | chr2_1:68640717-68640736 | Msa0220420:CDS | 40.0% | |
| ! | TGATCATAGGTTGGAGGGTA+AGG | + | chr2_1:68639974-68639993 | Msa0220420:intron | 45.0% |
| GGTAAGGTAGCTATAGTGAC+TGG | + | chr2_1:68639990-68640009 | Msa0220420:CDS | 45.0% | |
| GCTTTCACGTTGGAGAGATA+TGG | + | chr2_1:68640191-68640210 | Msa0220420:CDS | 45.0% | |
| GACATCATGTTCAGCAATGC+TGG | + | chr2_1:68640221-68640240 | Msa0220420:CDS | 45.0% | |
| ! | TTCAGCAATGCTGGTAATGC+TGG | + | chr2_1:68640230-68640249 | Msa0220420:CDS | 45.0% |
| ACCAACAAAACCAGCTACAC+TGG | - | chr2_1:68640399-68640418 | None:intergenic | 45.0% | |
| !!! | AGTGTAGCTGGTTTTGTTGG+TGG | + | chr2_1:68640398-68640417 | Msa0220420:CDS | 45.0% |
| ! | AGAGGTGTAGCAACAGCATA+AGG | - | chr2_1:68640530-68640549 | None:intergenic | 45.0% |
| ! | TGATCATAGGTTGGAGGGTA+AGG | + | chr2_1:68639974-68639993 | Msa0220420:intron | 45.0% |
| GGTAAGGTAGCTATAGTGAC+TGG | + | chr2_1:68639990-68640009 | Msa0220420:CDS | 45.0% | |
| GCTTTCACGTTGGAGAGATA+TGG | + | chr2_1:68640191-68640210 | Msa0220420:CDS | 45.0% | |
| GACATCATGTTCAGCAATGC+TGG | + | chr2_1:68640221-68640240 | Msa0220420:CDS | 45.0% | |
| ! | TTCAGCAATGCTGGTAATGC+TGG | + | chr2_1:68640230-68640249 | Msa0220420:CDS | 45.0% |
| ACCAACAAAACCAGCTACAC+TGG | - | chr2_1:68640399-68640418 | None:intergenic | 45.0% | |
| !!! | AGTGTAGCTGGTTTTGTTGG+TGG | + | chr2_1:68640398-68640417 | Msa0220420:CDS | 45.0% |
| ! | AGAGGTGTAGCAACAGCATA+AGG | - | chr2_1:68640530-68640549 | None:intergenic | 45.0% |
| TCTCATCTCTCAGGTCACAG+TGG | - | chr2_1:68640151-68640170 | None:intergenic | 50.0% | |
| CAAGCATGCTGCACGTGTAA+TGG | + | chr2_1:68640337-68640356 | Msa0220420:CDS | 50.0% | |
| ATTTGCACTGCCAGTGTAGC+TGG | + | chr2_1:68640386-68640405 | Msa0220420:CDS | 50.0% | |
| !!! | GCCAGTGTAGCTGGTTTTGT+TGG | + | chr2_1:68640395-68640414 | Msa0220420:CDS | 50.0% |
| !!! | GGTTTTGTTGGTGGATGTGC+AGG | + | chr2_1:68640407-68640426 | Msa0220420:CDS | 50.0% |
| AGGTCAACATGCAGTGAGCT+TGG | + | chr2_1:68640473-68640492 | Msa0220420:CDS | 50.0% | |
| TCAACATGCAGTGAGCTTGG+AGG | + | chr2_1:68640476-68640495 | Msa0220420:CDS | 50.0% | |
| TGCAGTGAGCTTGGAGGTTA+TGG | + | chr2_1:68640482-68640501 | Msa0220420:CDS | 50.0% | |
| ACCTCTTGCATGTAGAGCAC+TGG | + | chr2_1:68640544-68640563 | Msa0220420:CDS | 50.0% | |
| TCCAGTGCTCTACATGCAAG+AGG | - | chr2_1:68640548-68640567 | None:intergenic | 50.0% | |
| !! | TGCATGTAGAGCACTGGACA+TGG | + | chr2_1:68640550-68640569 | Msa0220420:CDS | 50.0% |
| CCAACAGCTTCGACTTCACT+GGG | - | chr2_1:68640578-68640597 | None:intergenic | 50.0% | |
| GGACACAACTTGGTCGTTGA+TGG | + | chr2_1:68640695-68640714 | Msa0220420:CDS | 50.0% | |
| ! | CACAACTTGGTCGTTGATGG+TGG | + | chr2_1:68640698-68640717 | Msa0220420:CDS | 50.0% |
| TCTCATCTCTCAGGTCACAG+TGG | - | chr2_1:68640151-68640170 | None:intergenic | 50.0% | |
| CAAGCATGCTGCACGTGTAA+TGG | + | chr2_1:68640337-68640356 | Msa0220420:CDS | 50.0% | |
| ATTTGCACTGCCAGTGTAGC+TGG | + | chr2_1:68640386-68640405 | Msa0220420:CDS | 50.0% | |
| !!! | GCCAGTGTAGCTGGTTTTGT+TGG | + | chr2_1:68640395-68640414 | Msa0220420:CDS | 50.0% |
| !!! | GGTTTTGTTGGTGGATGTGC+AGG | + | chr2_1:68640407-68640426 | Msa0220420:CDS | 50.0% |
| AGGTCAACATGCAGTGAGCT+TGG | + | chr2_1:68640473-68640492 | Msa0220420:CDS | 50.0% | |
| TCAACATGCAGTGAGCTTGG+AGG | + | chr2_1:68640476-68640495 | Msa0220420:CDS | 50.0% | |
| TGCAGTGAGCTTGGAGGTTA+TGG | + | chr2_1:68640482-68640501 | Msa0220420:CDS | 50.0% | |
| ACCTCTTGCATGTAGAGCAC+TGG | + | chr2_1:68640544-68640563 | Msa0220420:CDS | 50.0% | |
| TCCAGTGCTCTACATGCAAG+AGG | - | chr2_1:68640548-68640567 | None:intergenic | 50.0% | |
| !! | TGCATGTAGAGCACTGGACA+TGG | + | chr2_1:68640550-68640569 | Msa0220420:CDS | 50.0% |
| CCAACAGCTTCGACTTCACT+GGG | - | chr2_1:68640578-68640597 | None:intergenic | 50.0% | |
| GGACACAACTTGGTCGTTGA+TGG | + | chr2_1:68640695-68640714 | Msa0220420:CDS | 50.0% | |
| ! | CACAACTTGGTCGTTGATGG+TGG | + | chr2_1:68640698-68640717 | Msa0220420:CDS | 50.0% |
| ATAGTGACTGGGGCAGCAAG+CGG | + | chr2_1:68640002-68640021 | Msa0220420:CDS | 55.0% | |
| CATCTCTCAGGTCACAGTGG+TGG | - | chr2_1:68640148-68640167 | None:intergenic | 55.0% | |
| ACCATGGCTGTGAACGTTCG+TGG | + | chr2_1:68640299-68640318 | Msa0220420:CDS | 55.0% | |
| ACCACGAACGTTCACAGCCA+TGG | - | chr2_1:68640303-68640322 | None:intergenic | 55.0% | |
| GCATGCTGCACGTGTAATGG+TGG | + | chr2_1:68640340-68640359 | Msa0220420:CDS | 55.0% | |
| CCCAGTGAAGTCGAAGCTGT+TGG | + | chr2_1:68640575-68640594 | Msa0220420:CDS | 55.0% | |
| GCCAACAGCTTCGACTTCAC+TGG | - | chr2_1:68640579-68640598 | None:intergenic | 55.0% | |
| ATAGTGACTGGGGCAGCAAG+CGG | + | chr2_1:68640002-68640021 | Msa0220420:CDS | 55.0% | |
| CATCTCTCAGGTCACAGTGG+TGG | - | chr2_1:68640148-68640167 | None:intergenic | 55.0% | |
| ACCATGGCTGTGAACGTTCG+TGG | + | chr2_1:68640299-68640318 | Msa0220420:CDS | 55.0% | |
| ACCACGAACGTTCACAGCCA+TGG | - | chr2_1:68640303-68640322 | None:intergenic | 55.0% | |
| GCATGCTGCACGTGTAATGG+TGG | + | chr2_1:68640340-68640359 | Msa0220420:CDS | 55.0% | |
| CCCAGTGAAGTCGAAGCTGT+TGG | + | chr2_1:68640575-68640594 | Msa0220420:CDS | 55.0% | |
| GCCAACAGCTTCGACTTCAC+TGG | - | chr2_1:68640579-68640598 | None:intergenic | 55.0% | |
| ACTGGGGCAGCAAGCGGAAT+AGG | + | chr2_1:68640008-68640027 | Msa0220420:CDS | 60.0% | |
| ACTGGGGCAGCAAGCGGAAT+AGG | + | chr2_1:68640008-68640027 | Msa0220420:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 68639802 | 68641109 | 68639802 | ID=Msa0220420;Name=Msa0220420 |
| chr2_1 | mRNA | 68639802 | 68641109 | 68639802 | ID=Msa0220420-mRNA-1;Parent=Msa0220420;Name=Msa0220420-mRNA-1;_AED=0.01;_eAED=0.01;_QI=51|1|1|1|1|1|2|346|264 |
| chr2_1 | exon | 68639802 | 68639866 | 68639802 | ID=Msa0220420-mRNA-1:exon:19445;Parent=Msa0220420-mRNA-1 |
| chr2_1 | exon | 68639983 | 68641109 | 68639983 | ID=Msa0220420-mRNA-1:exon:19446;Parent=Msa0220420-mRNA-1 |
| chr2_1 | five_prime_UTR | 68639802 | 68639852 | 68639802 | ID=Msa0220420-mRNA-1:five_prime_utr;Parent=Msa0220420-mRNA-1 |
| chr2_1 | CDS | 68639853 | 68639866 | 68639853 | ID=Msa0220420-mRNA-1:cds;Parent=Msa0220420-mRNA-1 |
| chr2_1 | CDS | 68639983 | 68640763 | 68639983 | ID=Msa0220420-mRNA-1:cds;Parent=Msa0220420-mRNA-1 |
| chr2_1 | three_prime_UTR | 68640764 | 68641109 | 68640764 | ID=Msa0220420-mRNA-1:three_prime_utr;Parent=Msa0220420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
