Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322840 | XP_013463539.1 | 94.286 | 210 | 12 | 0 | 1 | 210 | 1 | 210 | 9.76e-141 | 401 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322840 | sp|Q9ZRA4|AB19A_PRUPE | 74.038 | 208 | 53 | 1 | 3 | 209 | 1 | 208 | 1.82e-108 | 312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0322840 | 0.863218 | 2.911717e-64 | -8.615850e-47 |
| Msa0003040 | Msa0322840 | 0.800174 | 1.630710e-48 | -8.615850e-47 |
| Msa0005050 | Msa0322840 | 0.802188 | 6.316101e-49 | -8.615850e-47 |
| Msa0006980 | Msa0322840 | 0.802716 | 4.915438e-49 | -8.615850e-47 |
| Msa0012440 | Msa0322840 | 0.828336 | 9.514009e-55 | -8.615850e-47 |
| Msa0015710 | Msa0322840 | 0.819155 | 1.347291e-52 | -8.615850e-47 |
| Msa0016120 | Msa0322840 | 0.840143 | 1.038258e-57 | -8.615850e-47 |
| Msa0019600 | Msa0322840 | 0.802844 | 4.625315e-49 | -8.615850e-47 |
| Msa0022640 | Msa0322840 | 0.826040 | 3.374624e-54 | -8.615850e-47 |
| Msa0036430 | Msa0322840 | 0.851234 | 1.013691e-60 | -8.615850e-47 |
| Msa0050040 | Msa0322840 | 0.838681 | 2.489588e-57 | -8.615850e-47 |
| Msa0053110 | Msa0322840 | 0.804582 | 2.016036e-49 | -8.615850e-47 |
| Msa0057240 | Msa0322840 | 0.819043 | 1.428785e-52 | -8.615850e-47 |
| Msa0084500 | Msa0322840 | 0.846326 | 2.329898e-59 | -8.615850e-47 |
| Msa0098440 | Msa0322840 | 0.817612 | 3.012944e-52 | -8.615850e-47 |
| Msa0102990 | Msa0322840 | 0.838924 | 2.153639e-57 | -8.615850e-47 |
| Msa0106790 | Msa0322840 | 0.857217 | 1.896693e-62 | -8.615850e-47 |
| Msa0109880 | Msa0322840 | 0.816671 | 4.903908e-52 | -8.615850e-47 |
| Msa0110970 | Msa0322840 | 0.804195 | 2.427272e-49 | -8.615850e-47 |
| Msa0118400 | Msa0322840 | 0.825311 | 5.023793e-54 | -8.615850e-47 |
| Msa0124130 | Msa0322840 | 0.807666 | 4.521364e-50 | -8.615850e-47 |
| Msa0130570 | Msa0322840 | 0.843008 | 1.824340e-58 | -8.615850e-47 |
| Msa0141600 | Msa0322840 | 0.829509 | 4.945969e-55 | -8.615850e-47 |
| Msa0147560 | Msa0322840 | 0.808567 | 2.906582e-50 | -8.615850e-47 |
| Msa0147600 | Msa0322840 | 0.802711 | 4.927663e-49 | -8.615850e-47 |
| Msa0149140 | Msa0322840 | 0.832824 | 7.582933e-56 | -8.615850e-47 |
| Msa0149560 | Msa0322840 | 0.823069 | 1.688776e-53 | -8.615850e-47 |
| Msa0153420 | Msa0322840 | 0.860583 | 1.866991e-63 | -8.615850e-47 |
| Msa0156250 | Msa0322840 | 0.810845 | 9.410523e-51 | -8.615850e-47 |
| Msa0161680 | Msa0322840 | 0.832425 | 9.520720e-56 | -8.615850e-47 |
| Msa0176470 | Msa0322840 | 0.838045 | 3.630993e-57 | -8.615850e-47 |
| Msa0194380 | Msa0322840 | 0.827620 | 1.414733e-54 | -8.615850e-47 |
| Msa0200030 | Msa0322840 | 0.806663 | 7.375507e-50 | -8.615850e-47 |
| Msa0203010 | Msa0322840 | 0.856561 | 2.960954e-62 | -8.615850e-47 |
| Msa0203020 | Msa0322840 | 0.850873 | 1.281423e-60 | -8.615850e-47 |
| Msa0203030 | Msa0322840 | 0.879684 | 1.019122e-69 | -8.615850e-47 |
| Msa0212150 | Msa0322840 | 0.840020 | 1.117666e-57 | -8.615850e-47 |
| Msa0219190 | Msa0322840 | 0.840344 | 9.199870e-58 | -8.615850e-47 |
| Msa0219310 | Msa0322840 | 0.803170 | 3.961857e-49 | -8.615850e-47 |
| Msa0220420 | Msa0322840 | 0.800070 | 1.712674e-48 | -8.615850e-47 |
| Msa0221290 | Msa0322840 | 0.813441 | 2.555657e-51 | -8.615850e-47 |
| Msa0236110 | Msa0322840 | 0.818187 | 2.233900e-52 | -8.615850e-47 |
| Msa0252770 | Msa0322840 | 0.845843 | 3.153098e-59 | -8.615850e-47 |
| Msa0262560 | Msa0322840 | 0.807118 | 5.907496e-50 | -8.615850e-47 |
| Msa0273990 | Msa0322840 | 0.802818 | 4.684116e-49 | -8.615850e-47 |
| Msa0280750 | Msa0322840 | 0.808253 | 3.391744e-50 | -8.615850e-47 |
| Msa0289920 | Msa0322840 | 0.814318 | 1.637384e-51 | -8.615850e-47 |
| Msa0298240 | Msa0322840 | 0.831074 | 2.051713e-55 | -8.615850e-47 |
| Msa0306120 | Msa0322840 | 0.850522 | 1.607827e-60 | -8.615850e-47 |
| Msa0314630 | Msa0322840 | 0.824473 | 7.919347e-54 | -8.615850e-47 |
| Msa0322830 | Msa0322840 | 0.905717 | 3.195041e-80 | -8.615850e-47 |
| Msa0322840 | Msa0322860 | 0.905523 | 3.922514e-80 | -8.615850e-47 |
| Msa0322840 | Msa0329620 | 0.843848 | 1.088523e-58 | -8.615850e-47 |
| Msa0322840 | Msa0351770 | 0.821769 | 3.385773e-53 | -8.615850e-47 |
| Msa0322840 | Msa0359250 | 0.842965 | 1.873116e-58 | -8.615850e-47 |
| Msa0322840 | Msa0373960 | 0.842990 | 1.844836e-58 | -8.615850e-47 |
| Msa0322840 | Msa0378500 | 0.805551 | 1.263720e-49 | -8.615850e-47 |
| Msa0322840 | Msa0406000 | 0.842930 | 1.914292e-58 | -8.615850e-47 |
| Msa0322840 | Msa0413930 | 0.841150 | 5.658038e-58 | -8.615850e-47 |
| Msa0322840 | Msa0417440 | 0.821682 | 3.546461e-53 | -8.615850e-47 |
| Msa0322840 | Msa0418200 | 0.801148 | 1.032414e-48 | -8.615850e-47 |
| Msa0322840 | Msa0419820 | 0.826547 | 2.555669e-54 | -8.615850e-47 |
| Msa0322840 | Msa0423100 | 0.837226 | 5.888588e-57 | -8.615850e-47 |
| Msa0322840 | Msa0424330 | 0.810035 | 1.408067e-50 | -8.615850e-47 |
| Msa0322840 | Msa0424340 | 0.821608 | 3.688886e-53 | -8.615850e-47 |
| Msa0322840 | Msa0436500 | 0.828181 | 1.036669e-54 | -8.615850e-47 |
| Msa0322840 | Msa0441590 | 0.804272 | 2.338738e-49 | -8.615850e-47 |
| Msa0322840 | Msa0444010 | 0.806243 | 9.040307e-50 | -8.615850e-47 |
| Msa0322840 | Msa0451400 | 0.850700 | 1.432883e-60 | -8.615850e-47 |
| Msa0322840 | Msa0464540 | 0.818562 | 1.837529e-52 | -8.615850e-47 |
| Msa0322840 | Msa0469260 | 0.833039 | 6.705219e-56 | -8.615850e-47 |
| Msa0322840 | Msa0492190 | 0.833754 | 4.448139e-56 | -8.615850e-47 |
| Msa0322840 | Msa0509790 | 0.801422 | 9.072647e-49 | -8.615850e-47 |
| Msa0322840 | Msa0515950 | 0.833563 | 4.962883e-56 | -8.615850e-47 |
| Msa0322840 | Msa0520510 | 0.823033 | 1.722261e-53 | -8.615850e-47 |
| Msa0322840 | Msa0533080 | 0.822597 | 2.175325e-53 | -8.615850e-47 |
| Msa0322840 | Msa0535040 | 0.830702 | 2.531251e-55 | -8.615850e-47 |
| Msa0322840 | Msa0538220 | 0.806907 | 6.549679e-50 | -8.615850e-47 |
| Msa0322840 | Msa0554130 | 0.814932 | 1.197405e-51 | -8.615850e-47 |
| Msa0322840 | Msa0575740 | 0.834612 | 2.710993e-56 | -8.615850e-47 |
| Msa0322840 | Msa0584130 | 0.837769 | 4.273829e-57 | -8.615850e-47 |
| Msa0322840 | Msa0591790 | 0.814963 | 1.178969e-51 | -8.615850e-47 |
| Msa0322840 | Msa0591800 | 0.808195 | 3.489045e-50 | -8.615850e-47 |
| Msa0322840 | Msa0594090 | 0.803577 | 3.261836e-49 | -8.615850e-47 |
| Msa0322840 | Msa0625890 | 0.807756 | 4.326675e-50 | -8.615850e-47 |
| Msa0322840 | Msa0641250 | 0.803521 | 3.350413e-49 | -8.615850e-47 |
| Msa0322840 | Msa0641360 | 0.803467 | 3.438859e-49 | -8.615850e-47 |
| Msa0322840 | Msa0663680 | 0.802406 | 5.694753e-49 | -8.615850e-47 |
| Msa0322840 | Msa0669840 | 0.859829 | 3.153629e-63 | -8.615850e-47 |
| Msa0322840 | Msa0679830 | 0.814060 | 1.866828e-51 | -8.615850e-47 |
| Msa0322840 | Msa0680150 | 0.830350 | 3.085552e-55 | -8.615850e-47 |
| Msa0322840 | Msa0682530 | 0.825407 | 4.767662e-54 | -8.615850e-47 |
| Msa0322840 | Msa0691160 | 0.814152 | 1.782275e-51 | -8.615850e-47 |
| Msa0322840 | Msa0707220 | 0.859245 | 4.726416e-63 | -8.615850e-47 |
| Msa0322840 | Msa0737190 | 0.812220 | 4.729650e-51 | -8.615850e-47 |
| Msa0322840 | Msa0739580 | 0.841824 | 3.759226e-58 | -8.615850e-47 |
| Msa0322840 | Msa0741900 | 0.805855 | 1.091335e-49 | -8.615850e-47 |
| Msa0322840 | Msa0742180 | 0.832200 | 1.082715e-55 | -8.615850e-47 |
| Msa0322840 | Msa0747780 | 0.807411 | 5.122022e-50 | -8.615850e-47 |
| Msa0322840 | Msa0764820 | 0.800828 | 1.200020e-48 | -8.615850e-47 |
| Msa0322840 | Msa0782360 | 0.834000 | 3.858772e-56 | -8.615850e-47 |
| Msa0322840 | Msa0802840 | 0.805580 | 1.246634e-49 | -8.615850e-47 |
| Msa0322840 | Msa0823400 | 0.840164 | 1.025102e-57 | -8.615850e-47 |
| Msa0322840 | Msa0828830 | 0.806296 | 8.814591e-50 | -8.615850e-47 |
| Msa0322840 | Msa0843640 | 0.824224 | 9.063427e-54 | -8.615850e-47 |
| Msa0322840 | Msa0860280 | 0.847337 | 1.232365e-59 | -8.615850e-47 |
| Msa0322840 | Msa0862310 | 0.821794 | 3.340916e-53 | -8.615850e-47 |
| Msa0322840 | Msa0867350 | 0.832644 | 8.405072e-56 | -8.615850e-47 |
| Msa0322840 | Msa0873190 | 0.806927 | 6.486627e-50 | -8.615850e-47 |
| Msa0322840 | Msa0876690 | 0.806124 | 9.579809e-50 | -8.615850e-47 |
| Msa0322840 | Msa0880140 | 0.803650 | 3.150718e-49 | -8.615850e-47 |
| Msa0322840 | Msa0885060 | 0.842882 | 1.971499e-58 | -8.615850e-47 |
| Msa0322840 | Msa0898730 | 0.832920 | 7.178017e-56 | -8.615850e-47 |
| Msa0322840 | Msa0899950 | 0.820797 | 5.674204e-53 | -8.615850e-47 |
| Msa0322840 | Msa0929870 | 0.817508 | 3.179211e-52 | -8.615850e-47 |
| Msa0322840 | Msa0936410 | 0.808396 | 3.161078e-50 | -8.615850e-47 |
| Msa0322840 | Msa0941960 | 0.823508 | 1.333850e-53 | -8.615850e-47 |
| Msa0322840 | Msa0946210 | 0.807239 | 5.570098e-50 | -8.615850e-47 |
| Msa0322840 | Msa0965310 | 0.825584 | 4.329453e-54 | -8.615850e-47 |
| Msa0322840 | Msa0975580 | 0.803231 | 3.847899e-49 | -8.615850e-47 |
| Msa0322840 | Msa0979510 | 0.813908 | 2.016588e-51 | -8.615850e-47 |
| Msa0322840 | Msa0986030 | 0.805312 | 1.418288e-49 | -8.615850e-47 |
| Msa0322840 | Msa0996270 | 0.802130 | 6.490520e-49 | -8.615850e-47 |
| Msa0322840 | Msa0999300 | 0.810713 | 1.005368e-50 | -8.615850e-47 |
| Msa0322840 | Msa0999340 | 0.832210 | 1.076353e-55 | -8.615850e-47 |
| Msa0322840 | Msa0999350 | 0.868068 | 8.589540e-66 | -8.615850e-47 |
| Msa0322840 | Msa0999360 | 0.872575 | 2.862035e-67 | -8.615850e-47 |
| Msa0322840 | Msa0999390 | 0.824497 | 7.815626e-54 | -8.615850e-47 |
| Msa0322840 | Msa0999400 | 0.862494 | 4.869551e-64 | -8.615850e-47 |
| Msa0322840 | Msa0999410 | 0.859268 | 4.652891e-63 | -8.615850e-47 |
| Msa0322840 | Msa1020720 | 0.814002 | 1.923123e-51 | -8.615850e-47 |
| Msa0322840 | Msa1033560 | 0.804175 | 2.451019e-49 | -8.615850e-47 |
| Msa0322840 | Msa1034680 | 0.816116 | 6.527853e-52 | -8.615850e-47 |
| Msa0322840 | Msa1037890 | 0.807810 | 4.213741e-50 | -8.615850e-47 |
| Msa0322840 | Msa1037900 | 0.817834 | 2.685103e-52 | -8.615850e-47 |
| Msa0322840 | Msa1041530 | 0.826486 | 2.642122e-54 | -8.615850e-47 |
| Msa0322840 | Msa1055260 | 0.800085 | 1.700165e-48 | -8.615850e-47 |
| Msa0322840 | Msa1055280 | 0.803759 | 2.990308e-49 | -8.615850e-47 |
| Msa0322840 | Msa1060580 | 0.802757 | 4.821513e-49 | -8.615850e-47 |
| Msa0322840 | Msa1073340 | 0.819068 | 1.410274e-52 | -8.615850e-47 |
| Msa0322840 | Msa1081570 | 0.837349 | 5.476557e-57 | -8.615850e-47 |
| Msa0322840 | Msa1092020 | 0.800845 | 1.190487e-48 | -8.615850e-47 |
| Msa0322840 | Msa1105890 | 0.802796 | 4.732194e-49 | -8.615850e-47 |
| Msa0322840 | Msa1113850 | 0.815571 | 8.636744e-52 | -8.615850e-47 |
| Msa0322840 | Msa1123880 | 0.812234 | 4.696732e-51 | -8.615850e-47 |
| Msa0322840 | Msa1127140 | 0.825992 | 3.463100e-54 | -8.615850e-47 |
| Msa0322840 | Msa1135380 | 0.807186 | 5.716339e-50 | -8.615850e-47 |
| Msa0322840 | Msa1139410 | 0.808740 | 2.670121e-50 | -8.615850e-47 |
| Msa0322840 | Msa1145020 | 0.870568 | 1.322224e-66 | -8.615850e-47 |
| Msa0322840 | Msa1166400 | 0.824405 | 8.217766e-54 | -8.615850e-47 |
| Msa0322840 | Msa1179280 | 0.813300 | 2.744505e-51 | -8.615850e-47 |
| Msa0322840 | Msa1200440 | 0.807393 | 5.166833e-50 | -8.615850e-47 |
| Msa0322840 | Msa1201110 | 0.845613 | 3.639943e-59 | -8.615850e-47 |
| Msa0322840 | Msa1201160 | 0.839312 | 1.708939e-57 | -8.615850e-47 |
| Msa0322840 | Msa1227340 | 0.802536 | 5.355089e-49 | -8.615850e-47 |
| Msa0322840 | Msa1228190 | 0.864913 | 8.634047e-65 | -8.615850e-47 |
| Msa0322840 | Msa1233560 | 0.828653 | 7.974700e-55 | -8.615850e-47 |
| Msa0322840 | Msa1248040 | 0.809110 | 2.224275e-50 | -8.615850e-47 |
| Msa0322840 | Msa1271260 | 0.852075 | 5.855416e-61 | -8.615850e-47 |
| Msa0322840 | Msa1293770 | 0.801571 | 8.455992e-49 | -8.615850e-47 |
| Msa0322840 | Msa1294290 | 0.831168 | 1.944853e-55 | -8.615850e-47 |
| Msa0322840 | Msa1305510 | 0.839308 | 1.712747e-57 | -8.615850e-47 |
| Msa0322840 | Msa1308620 | 0.800278 | 1.553671e-48 | -8.615850e-47 |
| Msa0322840 | Msa1313970 | 0.812343 | 4.446942e-51 | -8.615850e-47 |
| Msa0322840 | Msa1339440 | 0.808344 | 3.243048e-50 | -8.615850e-47 |
| Msa0322840 | Msa1378770 | 0.831234 | 1.874016e-55 | -8.615850e-47 |
| Msa0322840 | Msa1379970 | 0.822540 | 2.242940e-53 | -8.615850e-47 |
| Msa0322840 | Msa1389050 | 0.810467 | 1.136235e-50 | -8.615850e-47 |
| Msa0322840 | Msa1394890 | 0.823507 | 1.334418e-53 | -8.615850e-47 |
| Msa0322840 | Msa1406780 | 0.828903 | 6.938055e-55 | -8.615850e-47 |
| Msa0322840 | Msa1420060 | 0.862623 | 4.446474e-64 | -8.615850e-47 |
| Msa0322840 | Msa1421550 | 0.839831 | 1.252173e-57 | -8.615850e-47 |
| Msa0322840 | Msa1424690 | 0.840278 | 9.573396e-58 | -8.615850e-47 |
| Msa0322840 | Msa1429420 | 0.828813 | 7.298409e-55 | -8.615850e-47 |
| Msa0322840 | Msa1431850 | 0.837248 | 5.812525e-57 | -8.615850e-47 |
| Msa0322840 | Msa1435480 | 0.850720 | 1.414646e-60 | -8.615850e-47 |
| Msa0322840 | Msa1442630 | 0.812386 | 4.351159e-51 | -8.615850e-47 |
| Msa0322840 | Msa1449940 | 0.810920 | 9.069574e-51 | -8.615850e-47 |
| Msa0322840 | Msa1458910 | 0.830418 | 2.969419e-55 | -8.615850e-47 |
| Msa0322840 | Msa1459530 | 0.819177 | 1.331499e-52 | -8.615850e-47 |
| Msa0322840 | Msa1462530 | 0.802499 | 5.450899e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322840 | MtrunA17_Chr2g0300581 | 94.286 | 210 | 12 | 0 | 1 | 210 | 1 | 210 | 8.98e-145 | 401 |
| Msa0322840 | MtrunA17_Chr2g0300591 | 93.810 | 210 | 13 | 0 | 1 | 210 | 1 | 210 | 1.19e-144 | 401 |
| Msa0322840 | MtrunA17_Chr2g0300561 | 85.238 | 210 | 31 | 0 | 1 | 210 | 1 | 210 | 1.21e-129 | 363 |
| Msa0322840 | MtrunA17_Chr8g0343911 | 63.462 | 208 | 76 | 0 | 3 | 210 | 1 | 208 | 1.59e-91 | 266 |
| Msa0322840 | MtrunA17_Chr8g0343934 | 54.067 | 209 | 92 | 3 | 4 | 210 | 3 | 209 | 3.54e-78 | 233 |
| Msa0322840 | MtrunA17_Chr8g0343954 | 55.440 | 193 | 84 | 2 | 18 | 210 | 19 | 209 | 1.91e-76 | 228 |
| Msa0322840 | MtrunA17_Chr8g0343961 | 53.110 | 209 | 94 | 3 | 4 | 210 | 3 | 209 | 1.57e-75 | 226 |
| Msa0322840 | MtrunA17_Chr8g0343921 | 51.442 | 208 | 95 | 2 | 7 | 210 | 2 | 207 | 8.58e-72 | 216 |
| Msa0322840 | MtrunA17_Chr2g0301611 | 48.585 | 212 | 104 | 4 | 1 | 210 | 1 | 209 | 5.49e-69 | 209 |
| Msa0322840 | MtrunA17_Chr2g0302171 | 50.239 | 209 | 100 | 3 | 4 | 210 | 3 | 209 | 2.45e-68 | 208 |
| Msa0322840 | MtrunA17_Chr2g0313961 | 50.485 | 206 | 99 | 3 | 4 | 209 | 6 | 208 | 1.72e-67 | 206 |
| Msa0322840 | MtrunA17_Chr2g0297241 | 50.481 | 208 | 99 | 3 | 4 | 209 | 3 | 208 | 8.76e-67 | 204 |
| Msa0322840 | MtrunA17_Chr2g0297231 | 49.515 | 206 | 100 | 3 | 4 | 207 | 3 | 206 | 2.06e-66 | 203 |
| Msa0322840 | MtrunA17_Chr3g0084531 | 48.325 | 209 | 104 | 3 | 4 | 210 | 3 | 209 | 1.19e-65 | 201 |
| Msa0322840 | MtrunA17_Chr3g0084511 | 48.558 | 208 | 104 | 3 | 4 | 210 | 3 | 208 | 4.80e-65 | 199 |
| Msa0322840 | MtrunA17_Chr3g0084521 | 48.558 | 208 | 104 | 3 | 4 | 210 | 3 | 208 | 1.41e-64 | 198 |
| Msa0322840 | MtrunA17_Chr8g0344051 | 47.887 | 213 | 107 | 3 | 1 | 210 | 1 | 212 | 7.61e-64 | 197 |
| Msa0322840 | MtrunA17_Chr8g0344021 | 46.479 | 213 | 110 | 3 | 1 | 210 | 1 | 212 | 1.89e-61 | 191 |
| Msa0322840 | MtrunA17_Chr4g0003361 | 48.077 | 208 | 105 | 3 | 3 | 210 | 1 | 205 | 3.85e-60 | 187 |
| Msa0322840 | MtrunA17_Chr5g0411961 | 44.550 | 211 | 114 | 3 | 1 | 210 | 1 | 209 | 1.88e-59 | 185 |
| Msa0322840 | MtrunA17_Chr4g0012651 | 47.938 | 194 | 99 | 2 | 17 | 210 | 18 | 209 | 2.45e-58 | 182 |
| Msa0322840 | MtrunA17_Chr7g0217811 | 46.907 | 194 | 101 | 2 | 17 | 210 | 18 | 209 | 1.11e-57 | 181 |
| Msa0322840 | MtrunA17_Chr2g0302541 | 46.154 | 195 | 103 | 2 | 16 | 210 | 17 | 209 | 2.38e-57 | 180 |
| Msa0322840 | MtrunA17_Chr8g0344031 | 44.860 | 214 | 111 | 4 | 1 | 210 | 1 | 211 | 5.20e-57 | 179 |
| Msa0322840 | MtrunA17_Chr8g0344041 | 41.827 | 208 | 119 | 2 | 4 | 210 | 7 | 213 | 3.12e-56 | 177 |
| Msa0322840 | MtrunA17_Chr3g0115141 | 42.791 | 215 | 113 | 5 | 1 | 210 | 1 | 210 | 3.90e-56 | 177 |
| Msa0322840 | MtrunA17_Chr2g0286171 | 41.475 | 217 | 115 | 5 | 1 | 210 | 1 | 212 | 5.13e-52 | 166 |
| Msa0322840 | MtrunA17_Chr3g0084551 | 44.498 | 209 | 106 | 4 | 4 | 210 | 3 | 203 | 1.12e-51 | 166 |
| Msa0322840 | MtrunA17_Chr2g0292831 | 42.162 | 185 | 100 | 3 | 23 | 203 | 28 | 209 | 3.12e-43 | 144 |
| Msa0322840 | MtrunA17_Chr2g0292901 | 40.838 | 191 | 106 | 3 | 17 | 203 | 23 | 210 | 1.57e-42 | 142 |
| Msa0322840 | MtrunA17_Chr4g0007051 | 39.623 | 212 | 111 | 5 | 7 | 203 | 4 | 213 | 6.64e-41 | 138 |
| Msa0322840 | MtrunA17_Chr4g0007031 | 39.623 | 212 | 111 | 5 | 7 | 203 | 4 | 213 | 7.81e-41 | 138 |
| Msa0322840 | MtrunA17_Chr5g0419971 | 39.623 | 212 | 111 | 5 | 7 | 203 | 4 | 213 | 7.81e-41 | 138 |
| Msa0322840 | MtrunA17_Chr5g0419981 | 39.623 | 212 | 111 | 5 | 7 | 203 | 4 | 213 | 7.81e-41 | 138 |
| Msa0322840 | MtrunA17_Chr6g0449731 | 39.252 | 214 | 115 | 5 | 3 | 203 | 1 | 212 | 2.55e-39 | 134 |
| Msa0322840 | MtrunA17_Chr2g0285871 | 38.208 | 212 | 114 | 5 | 7 | 203 | 4 | 213 | 3.22e-39 | 134 |
| Msa0322840 | MtrunA17_Chr1g0189841 | 39.810 | 211 | 111 | 5 | 8 | 203 | 5 | 214 | 3.45e-39 | 134 |
| Msa0322840 | MtrunA17_Chr1g0156131 | 41.071 | 168 | 95 | 2 | 40 | 203 | 39 | 206 | 4.43e-39 | 133 |
| Msa0322840 | MtrunA17_Chr4g0007041 | 38.208 | 212 | 114 | 5 | 7 | 203 | 4 | 213 | 7.23e-39 | 133 |
| Msa0322840 | MtrunA17_Chr6g0449761 | 39.252 | 214 | 115 | 5 | 3 | 203 | 1 | 212 | 8.11e-39 | 134 |
| Msa0322840 | MtrunA17_Chr6g0449771 | 38.785 | 214 | 116 | 5 | 3 | 203 | 1 | 212 | 1.70e-38 | 132 |
| Msa0322840 | MtrunA17_Chr1g0210761 | 35.821 | 201 | 124 | 2 | 3 | 203 | 9 | 204 | 1.79e-38 | 132 |
| Msa0322840 | MtrunA17_Chr1g0178711 | 40.120 | 167 | 99 | 1 | 40 | 206 | 56 | 221 | 3.87e-38 | 131 |
| Msa0322840 | MtrunA17_Chr1g0193421 | 39.785 | 186 | 110 | 1 | 23 | 206 | 30 | 215 | 6.50e-38 | 130 |
| Msa0322840 | MtrunA17_Chr2g0292861 | 40.828 | 169 | 95 | 3 | 40 | 203 | 7 | 175 | 1.64e-37 | 128 |
| Msa0322840 | MtrunA17_Chr6g0449751 | 39.352 | 216 | 114 | 6 | 1 | 203 | 1 | 212 | 6.13e-37 | 128 |
| Msa0322840 | MtrunA17_Chr7g0271211 | 40.107 | 187 | 110 | 1 | 23 | 207 | 26 | 212 | 6.21e-37 | 128 |
| Msa0322840 | MtrunA17_Chr2g0292841 | 40.237 | 169 | 96 | 3 | 40 | 203 | 7 | 175 | 2.42e-36 | 125 |
| Msa0322840 | MtrunA17_Chr2g0292911 | 51.282 | 117 | 55 | 1 | 40 | 154 | 7 | 123 | 4.40e-36 | 124 |
| Msa0322840 | MtrunA17_Chr1g0193671 | 36.066 | 183 | 115 | 1 | 23 | 203 | 29 | 211 | 3.73e-33 | 118 |
| Msa0322840 | MtrunA17_Chr5g0414971 | 34.921 | 189 | 120 | 2 | 23 | 208 | 33 | 221 | 2.04e-32 | 116 |
| Msa0322840 | MtrunA17_Chr3g0130241 | 36.413 | 184 | 102 | 4 | 1 | 171 | 63 | 244 | 3.91e-31 | 115 |
| Msa0322840 | MtrunA17_Chr6g0449791 | 36.979 | 192 | 112 | 4 | 14 | 198 | 19 | 208 | 1.36e-30 | 111 |
| Msa0322840 | MtrunA17_Chr6g0449781 | 36.559 | 186 | 111 | 4 | 23 | 203 | 28 | 211 | 1.99e-30 | 111 |
| Msa0322840 | MtrunA17_Chr8g0335851 | 36.723 | 177 | 99 | 5 | 4 | 169 | 5 | 179 | 7.11e-30 | 110 |
| Msa0322840 | MtrunA17_Chr3g0084501 | 49.515 | 103 | 50 | 2 | 4 | 106 | 6 | 106 | 5.47e-29 | 104 |
| Msa0322840 | MtrunA17_Chr2g0321591 | 32.524 | 206 | 123 | 5 | 2 | 203 | 8 | 201 | 3.63e-25 | 97.4 |
| Msa0322840 | MtrunA17_Chr2g0321581 | 32.524 | 206 | 123 | 5 | 2 | 203 | 8 | 201 | 3.71e-25 | 97.4 |
| Msa0322840 | MtrunA17_Chr2g0321601 | 31.100 | 209 | 122 | 5 | 2 | 203 | 7 | 200 | 1.56e-23 | 93.2 |
| Msa0322840 | MtrunA17_Chr4g0026191 | 29.108 | 213 | 125 | 7 | 1 | 203 | 6 | 202 | 2.90e-18 | 79.3 |
| Msa0322840 | MtrunA17_Chr4g0026201 | 33.333 | 129 | 85 | 1 | 76 | 203 | 74 | 202 | 3.15e-18 | 79.3 |
| Msa0322840 | MtrunA17_Chr2g0327651 | 29.703 | 101 | 69 | 2 | 43 | 142 | 6 | 105 | 4.70e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0322840 | AT5G20630.1 | 65.714 | 210 | 71 | 1 | 1 | 209 | 1 | 210 | 1.29e-95 | 278 |
| Msa0322840 | AT1G72610.1 | 62.500 | 208 | 78 | 0 | 3 | 210 | 1 | 208 | 5.38e-86 | 253 |
| Msa0322840 | AT3G04200.1 | 45.312 | 192 | 97 | 5 | 23 | 207 | 33 | 223 | 1.95e-43 | 145 |
| Msa0322840 | AT5G39160.3 | 42.105 | 190 | 102 | 3 | 23 | 207 | 30 | 216 | 4.10e-42 | 142 |
| Msa0322840 | AT5G39190.1 | 42.408 | 191 | 104 | 3 | 23 | 207 | 30 | 220 | 2.58e-41 | 140 |
| Msa0322840 | AT5G39160.1 | 42.408 | 191 | 104 | 3 | 23 | 207 | 30 | 220 | 2.81e-41 | 140 |
| Msa0322840 | AT5G39130.1 | 41.885 | 191 | 105 | 3 | 23 | 207 | 30 | 220 | 7.84e-41 | 139 |
| Msa0322840 | AT5G39120.1 | 38.498 | 213 | 122 | 4 | 1 | 204 | 5 | 217 | 6.46e-40 | 136 |
| Msa0322840 | AT5G39110.1 | 41.489 | 188 | 103 | 3 | 23 | 203 | 30 | 217 | 7.47e-40 | 136 |
| Msa0322840 | AT1G18980.1 | 39.901 | 203 | 117 | 3 | 3 | 203 | 16 | 215 | 1.62e-39 | 135 |
| Msa0322840 | AT5G38960.1 | 40.500 | 200 | 104 | 5 | 19 | 207 | 28 | 223 | 2.07e-39 | 135 |
| Msa0322840 | AT3G05950.1 | 42.246 | 187 | 102 | 3 | 23 | 203 | 32 | 218 | 2.92e-39 | 135 |
| Msa0322840 | AT1G18970.1 | 38.164 | 207 | 122 | 3 | 1 | 203 | 11 | 215 | 2.94e-39 | 134 |
| Msa0322840 | AT5G39150.1 | 37.674 | 215 | 123 | 4 | 1 | 204 | 3 | 217 | 1.97e-38 | 132 |
| Msa0322840 | AT5G39180.1 | 37.674 | 215 | 123 | 4 | 1 | 204 | 3 | 217 | 2.99e-38 | 132 |
| Msa0322840 | AT5G61750.1 | 45.113 | 133 | 73 | 0 | 37 | 169 | 41 | 173 | 6.89e-38 | 130 |
| Msa0322840 | AT1G02335.1 | 35.122 | 205 | 131 | 1 | 5 | 207 | 12 | 216 | 7.08e-38 | 131 |
| Msa0322840 | AT3G62020.1 | 36.585 | 205 | 120 | 3 | 9 | 203 | 8 | 212 | 1.84e-37 | 130 |
| Msa0322840 | AT3G05930.1 | 39.524 | 210 | 117 | 4 | 4 | 204 | 5 | 213 | 7.89e-37 | 128 |
| Msa0322840 | AT3G04150.1 | 40.000 | 195 | 109 | 4 | 23 | 210 | 32 | 225 | 1.33e-36 | 128 |
| Msa0322840 | AT5G26700.1 | 35.644 | 202 | 124 | 3 | 3 | 203 | 10 | 206 | 2.02e-36 | 127 |
| Msa0322840 | AT3G10080.1 | 39.429 | 175 | 100 | 2 | 21 | 190 | 30 | 203 | 3.01e-36 | 127 |
| Msa0322840 | AT5G38940.1 | 45.033 | 151 | 79 | 2 | 23 | 169 | 32 | 182 | 4.49e-36 | 126 |
| Msa0322840 | AT3G04150.2 | 40.223 | 179 | 102 | 2 | 37 | 210 | 60 | 238 | 6.56e-36 | 126 |
| Msa0322840 | AT5G38940.2 | 45.033 | 151 | 79 | 2 | 23 | 169 | 56 | 206 | 7.43e-36 | 126 |
| Msa0322840 | AT3G10080.2 | 39.429 | 175 | 100 | 2 | 21 | 190 | 101 | 274 | 9.99e-36 | 127 |
| Msa0322840 | AT5G38930.1 | 39.572 | 187 | 107 | 3 | 23 | 203 | 32 | 218 | 2.00e-35 | 125 |
| Msa0322840 | AT1G09560.1 | 42.373 | 177 | 100 | 1 | 8 | 184 | 17 | 191 | 3.40e-35 | 124 |
| Msa0322840 | AT4G14630.1 | 39.362 | 188 | 107 | 3 | 23 | 203 | 32 | 219 | 5.18e-35 | 124 |
| Msa0322840 | AT3G04180.1 | 40.104 | 192 | 105 | 6 | 23 | 206 | 32 | 221 | 7.70e-35 | 123 |
| Msa0322840 | AT3G04190.1 | 38.743 | 191 | 109 | 4 | 23 | 206 | 32 | 221 | 1.32e-34 | 122 |
| Msa0322840 | AT5G39190.2 | 42.405 | 158 | 86 | 2 | 55 | 207 | 41 | 198 | 1.49e-34 | 122 |
| Msa0322840 | AT5G39160.2 | 42.405 | 158 | 86 | 2 | 55 | 207 | 41 | 198 | 1.67e-34 | 122 |
| Msa0322840 | AT3G62020.2 | 37.647 | 170 | 103 | 2 | 37 | 203 | 14 | 183 | 2.11e-34 | 121 |
| Msa0322840 | AT5G38910.1 | 41.989 | 181 | 89 | 4 | 14 | 182 | 17 | 193 | 5.80e-33 | 118 |
| Msa0322840 | AT3G04170.1 | 38.743 | 191 | 106 | 5 | 23 | 206 | 32 | 218 | 1.94e-32 | 117 |
| Msa0322840 | AT1G10460.1 | 34.872 | 195 | 116 | 5 | 23 | 208 | 25 | 217 | 2.23e-30 | 111 |
| Msa0322840 | AT1G74820.1 | 33.333 | 207 | 132 | 3 | 1 | 203 | 18 | 222 | 1.20e-29 | 110 |
| Msa0322840 | AT5G38910.2 | 32.086 | 187 | 80 | 4 | 4 | 182 | 9 | 156 | 3.32e-14 | 68.6 |
Find 48 sgRNAs with CRISPR-Local
Find 51 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAACCACCAACATTAATT+TGG | 0.165752 | 2_4:+26405014 | None:intergenic |
| TAATCCTCGTTTACAGATAT+TGG | 0.259615 | 2_4:-26404960 | Msa0322840:CDS |
| GAAGTGTTGGTTGTTATTAA+AGG | 0.290621 | 2_4:-26405136 | Msa0322840:CDS |
| TCATTCGCGGTTACCTTTGA+TGG | 0.323535 | 2_4:+26405334 | None:intergenic |
| AAGAAGCTTAAGGGTGTTCT+TGG | 0.328993 | 2_4:-26404863 | Msa0322840:CDS |
| GCATTTGACGCACAATTTCC+TGG | 0.335062 | 2_4:-26405244 | Msa0322840:CDS |
| GAATATCCAGCTGGGCCATT+TGG | 0.360878 | 2_4:+26405367 | None:intergenic |
| AAGGGTGTTCTTGGAGGTAG+TGG | 0.422600 | 2_4:-26404854 | Msa0322840:CDS |
| TTTCCTGGTGTAAACGGTCT+TGG | 0.426338 | 2_4:-26405229 | Msa0322840:CDS |
| GCACAATTTCCTGGTGTAAA+CGG | 0.439824 | 2_4:-26405235 | Msa0322840:CDS |
| AATGCACCAAATGGCCCAGC+TGG | 0.454211 | 2_4:-26405373 | Msa0322840:CDS |
| AAATCATAACATCACCTTTG+TGG | 0.454407 | 2_4:+26405059 | None:intergenic |
| CATTTCCAAATTAATGTTGG+TGG | 0.455196 | 2_4:-26405019 | Msa0322840:CDS |
| AACCAACACTTCCGAAGCAC+CGG | 0.468211 | 2_4:+26405147 | None:intergenic |
| TCACACACACCCCGGTGCTT+CGG | 0.471434 | 2_4:-26405158 | Msa0322840:CDS |
| GGCTAAATCTAAACGCGCAA+TGG | 0.477631 | 2_4:+26405201 | None:intergenic |
| TACCACGGCCTAGCTGCAGC+TGG | 0.478895 | 2_4:-26405304 | Msa0322840:CDS |
| AAGCTTAAGGGTGTTCTTGG+AGG | 0.489760 | 2_4:-26404860 | Msa0322840:CDS |
| TGCTGTAGTGAAGAAGCTTA+AGG | 0.492145 | 2_4:-26404873 | Msa0322840:CDS |
| ATTAAAGGAACAATCAGTGC+TGG | 0.495019 | 2_4:-26405121 | Msa0322840:CDS |
| AGCGGCTTTGATAATGTTTG+TGG | 0.500309 | 2_4:+26405276 | None:intergenic |
| GCTGTAGTGAAGAAGCTTAA+GGG | 0.505860 | 2_4:-26404872 | Msa0322840:CDS |
| TGGTGTTTCCAGCTGCAGCT+AGG | 0.511440 | 2_4:+26405296 | None:intergenic |
| CCCCGGTGCTTCGGAAGTGT+TGG | 0.517888 | 2_4:-26405149 | Msa0322840:CDS |
| TTCCAGCTGCAGCTAGGCCG+TGG | 0.519147 | 2_4:+26405302 | None:intergenic |
| GGTTTGCAAGAATATCCAGC+TGG | 0.520856 | 2_4:+26405358 | None:intergenic |
| GCAGATTACAATGCACCAAA+TGG | 0.532463 | 2_4:-26405382 | Msa0322840:CDS |
| ACCAACACTTCCGAAGCACC+GGG | 0.535461 | 2_4:+26405148 | None:intergenic |
| TTCTTGCAAACCACCATCAA+AGG | 0.552457 | 2_4:-26405347 | Msa0322840:CDS |
| AAGGTAAACAACATTGTCAG+AGG | 0.569703 | 2_4:+26405090 | None:intergenic |
| TTGCATTTCCAAATTAATGT+TGG | 0.570619 | 2_4:-26405022 | Msa0322840:CDS |
| TTCGCGGTTACCTTTGATGG+TGG | 0.572308 | 2_4:+26405337 | None:intergenic |
| CGTTTAGATTTAGCCGTCGG+TGG | 0.577924 | 2_4:-26405193 | Msa0322840:CDS |
| AGGAAATTGTGCGTCAAATG+CGG | 0.595844 | 2_4:+26405246 | None:intergenic |
| TGGAAATGCAACAATCCTTG+TGG | 0.601071 | 2_4:+26405034 | None:intergenic |
| ATTCCAAGACCGTTTACACC+AGG | 0.601562 | 2_4:+26405226 | None:intergenic |
| GCGCGTTTAGATTTAGCCGT+CGG | 0.614388 | 2_4:-26405196 | Msa0322840:CDS |
| TGCTACGCAGAAATCTACTA+CGG | 0.620040 | 2_4:+26405402 | None:intergenic |
| GCACCGGGGTGTGTGTGAAG+TGG | 0.621649 | 2_4:+26405163 | None:intergenic |
| GTGGTAGACGAAGTCATTCG+CGG | 0.625632 | 2_4:+26405321 | None:intergenic |
| GTTTGCAAGAATATCCAGCT+GGG | 0.638814 | 2_4:+26405359 | None:intergenic |
| AAGTGGAACAACACCACCGA+CGG | 0.642171 | 2_4:+26405180 | None:intergenic |
| TACCTTAAAACACTCCACAA+AGG | 0.642333 | 2_4:-26405073 | Msa0322840:CDS |
| GTCAAATGCGGTGCTAACAG+CGG | 0.644054 | 2_4:+26405258 | None:intergenic |
| GTTCCACTTCACACACACCC+CGG | 0.667019 | 2_4:-26405166 | Msa0322840:CDS |
| TAATCCAATATCTGTAAACG+AGG | 0.700438 | 2_4:+26404956 | None:intergenic |
| GCGAATGACTTCGTCTACCA+CGG | 0.705558 | 2_4:-26405319 | Msa0322840:CDS |
| CCAACACTTCCGAAGCACCG+GGG | 0.770530 | 2_4:+26405149 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTGCATTTCCAAATTAATGT+TGG | - | chr2_4:26405288-26405307 | Msa0322840:CDS | 25.0% |
| !! | GAAGTGTTGGTTGTTATTAA+AGG | - | chr2_4:26405174-26405193 | Msa0322840:CDS | 30.0% |
| AAATCATAACATCACCTTTG+TGG | + | chr2_4:26405254-26405273 | None:intergenic | 30.0% | |
| ! | GATGTTATGATTTTTCCACA+AGG | - | chr2_4:26405261-26405280 | Msa0322840:CDS | 30.0% |
| CATTTCCAAATTAATGTTGG+TGG | - | chr2_4:26405291-26405310 | Msa0322840:CDS | 30.0% | |
| TAGAACCACCAACATTAATT+TGG | + | chr2_4:26405299-26405318 | None:intergenic | 30.0% | |
| TAATCCTCGTTTACAGATAT+TGG | - | chr2_4:26405350-26405369 | Msa0322840:CDS | 30.0% | |
| TAATCCAATATCTGTAAACG+AGG | + | chr2_4:26405357-26405376 | None:intergenic | 30.0% | |
| !! | GTTTTAGTAATCAACTCAGT+TGG | + | chr2_4:26405402-26405421 | None:intergenic | 30.0% |
| ATTAAAGGAACAATCAGTGC+TGG | - | chr2_4:26405189-26405208 | Msa0322840:CDS | 35.0% | |
| AAGGTAAACAACATTGTCAG+AGG | + | chr2_4:26405223-26405242 | None:intergenic | 35.0% | |
| TACCTTAAAACACTCCACAA+AGG | - | chr2_4:26405237-26405256 | Msa0322840:CDS | 35.0% | |
| TGCTACGCAGAAATCTACTA+CGG | + | chr2_4:26404911-26404930 | None:intergenic | 40.0% | |
| GCAGATTACAATGCACCAAA+TGG | - | chr2_4:26404928-26404947 | Msa0322840:CDS | 40.0% | |
| GTTTGCAAGAATATCCAGCT+GGG | + | chr2_4:26404954-26404973 | None:intergenic | 40.0% | |
| TTCTTGCAAACCACCATCAA+AGG | - | chr2_4:26404963-26404982 | Msa0322840:CDS | 40.0% | |
| !! | AGCGGCTTTGATAATGTTTG+TGG | + | chr2_4:26405037-26405056 | None:intergenic | 40.0% |
| AGGAAATTGTGCGTCAAATG+CGG | + | chr2_4:26405067-26405086 | None:intergenic | 40.0% | |
| GCACAATTTCCTGGTGTAAA+CGG | - | chr2_4:26405075-26405094 | Msa0322840:CDS | 40.0% | |
| !! | CACCTTTGTGGAGTGTTTTA+AGG | + | chr2_4:26405242-26405261 | None:intergenic | 40.0% |
| TGGAAATGCAACAATCCTTG+TGG | + | chr2_4:26405279-26405298 | None:intergenic | 40.0% | |
| TGCTGTAGTGAAGAAGCTTA+AGG | - | chr2_4:26405437-26405456 | Msa0322840:CDS | 40.0% | |
| GCTGTAGTGAAGAAGCTTAA+GGG | - | chr2_4:26405438-26405457 | Msa0322840:CDS | 40.0% | |
| !! | AAGAAGCTTAAGGGTGTTCT+TGG | - | chr2_4:26405447-26405466 | Msa0322840:CDS | 40.0% |
| GGTTTGCAAGAATATCCAGC+TGG | + | chr2_4:26404955-26404974 | None:intergenic | 45.0% | |
| TCATTCGCGGTTACCTTTGA+TGG | + | chr2_4:26404979-26404998 | None:intergenic | 45.0% | |
| GCATTTGACGCACAATTTCC+TGG | - | chr2_4:26405066-26405085 | Msa0322840:CDS | 45.0% | |
| TTTCCTGGTGTAAACGGTCT+TGG | - | chr2_4:26405081-26405100 | Msa0322840:CDS | 45.0% | |
| ATTCCAAGACCGTTTACACC+AGG | + | chr2_4:26405087-26405106 | None:intergenic | 45.0% | |
| GGCTAAATCTAAACGCGCAA+TGG | + | chr2_4:26405112-26405131 | None:intergenic | 45.0% | |
| !! | AAGCTTAAGGGTGTTCTTGG+AGG | - | chr2_4:26405450-26405469 | Msa0322840:CDS | 45.0% |
| GAATATCCAGCTGGGCCATT+TGG | + | chr2_4:26404946-26404965 | None:intergenic | 50.0% | |
| TTCGCGGTTACCTTTGATGG+TGG | + | chr2_4:26404976-26404995 | None:intergenic | 50.0% | |
| GTGGTAGACGAAGTCATTCG+CGG | + | chr2_4:26404992-26405011 | None:intergenic | 50.0% | |
| GCGAATGACTTCGTCTACCA+CGG | - | chr2_4:26404991-26405010 | Msa0322840:CDS | 50.0% | |
| ! | GTCAAATGCGGTGCTAACAG+CGG | + | chr2_4:26405055-26405074 | None:intergenic | 50.0% |
| GCGCGTTTAGATTTAGCCGT+CGG | - | chr2_4:26405114-26405133 | Msa0322840:CDS | 50.0% | |
| CGTTTAGATTTAGCCGTCGG+TGG | - | chr2_4:26405117-26405136 | Msa0322840:CDS | 50.0% | |
| AAGTGGAACAACACCACCGA+CGG | + | chr2_4:26405133-26405152 | None:intergenic | 50.0% | |
| AACCAACACTTCCGAAGCAC+CGG | + | chr2_4:26405166-26405185 | None:intergenic | 50.0% | |
| !! | AAGGGTGTTCTTGGAGGTAG+TGG | - | chr2_4:26405456-26405475 | Msa0322840:CDS | 50.0% |
| AATGCACCAAATGGCCCAGC+TGG | - | chr2_4:26404937-26404956 | Msa0322840:CDS | 55.0% | |
| TGGTGTTTCCAGCTGCAGCT+AGG | + | chr2_4:26405017-26405036 | None:intergenic | 55.0% | |
| GTTCCACTTCACACACACCC+CGG | - | chr2_4:26405144-26405163 | Msa0322840:CDS | 55.0% | |
| ! | ACCAACACTTCCGAAGCACC+GGG | + | chr2_4:26405165-26405184 | None:intergenic | 55.0% |
| TCACACACACCCCGGTGCTT+CGG | - | chr2_4:26405152-26405171 | Msa0322840:CDS | 60.0% | |
| !! | CCAACACTTCCGAAGCACCG+GGG | + | chr2_4:26405164-26405183 | None:intergenic | 60.0% |
| TACCACGGCCTAGCTGCAGC+TGG | - | chr2_4:26405006-26405025 | Msa0322840:CDS | 65.0% | |
| TTCCAGCTGCAGCTAGGCCG+TGG | + | chr2_4:26405011-26405030 | None:intergenic | 65.0% | |
| GCACCGGGGTGTGTGTGAAG+TGG | + | chr2_4:26405150-26405169 | None:intergenic | 65.0% | |
| ! | CCCCGGTGCTTCGGAAGTGT+TGG | - | chr2_4:26405161-26405180 | Msa0322840:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 26404850 | 26405482 | 26404850 | ID=Msa0322840;Name=Msa0322840 |
| chr2_4 | mRNA | 26404850 | 26405482 | 26404850 | ID=Msa0322840-mRNA-1;Parent=Msa0322840;Name=Msa0322840-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|210 |
| chr2_4 | exon | 26404850 | 26405482 | 26404850 | ID=Msa0322840-mRNA-1:exon:9214;Parent=Msa0322840-mRNA-1 |
| chr2_4 | CDS | 26404850 | 26405482 | 26404850 | ID=Msa0322840-mRNA-1:cds;Parent=Msa0322840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
