AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1179280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179280 MtrunA17_Chr8g0342891 94.664 862 45 1 1 862 1 861 0.0 1702
Msa1179280 MtrunA17_Chr8g0342921 81.871 866 151 2 2 862 5 869 0.0 1494
Msa1179280 MtrunA17_Chr8g0342971 79.954 863 166 4 6 862 9 870 0.0 1457
Msa1179280 MtrunA17_Chr8g0342951 80.604 861 162 2 6 862 9 868 0.0 1445
Msa1179280 MtrunA17_Chr8g0344211 77.933 861 185 2 6 862 9 868 0.0 1423
Msa1179280 MtrunA17_Chr8g0343011 77.520 863 182 3 6 862 9 865 0.0 1406
Msa1179280 MtrunA17_Chr8g0342931 85.220 751 110 1 112 862 1 750 0.0 1354
Msa1179280 MtrunA17_Chr8g0342901 76.870 869 153 8 1 862 1 828 0.0 1351
Msa1179280 MtrunA17_Chr2g0329911 69.267 859 256 5 6 862 9 861 0.0 1252
Msa1179280 MtrunA17_Chr8g0342881 67.485 855 272 3 9 862 7 856 0.0 1225
Msa1179280 MtrunA17_Chr2g0329901 64.475 867 299 5 1 862 1 863 0.0 1181
Msa1179280 MtrunA17_Chr5g0406871 64.352 864 292 7 9 862 10 867 0.0 1171
Msa1179280 MtrunA17_Chr8g0343021 61.921 864 318 6 6 862 5 864 0.0 1145
Msa1179280 MtrunA17_Chr8g0343031 61.954 870 318 6 1 862 1 865 0.0 1142
Msa1179280 MtrunA17_Chr3g0120071 61.350 859 325 6 6 862 5 858 0.0 1121
Msa1179280 MtrunA17_Chr8g0342991 64.052 854 250 9 11 862 9 807 0.0 1114
Msa1179280 MtrunA17_Chr8g0343001 63.115 854 258 9 11 862 9 807 0.0 1100
Msa1179280 MtrunA17_Chr8g0342981 62.576 823 262 11 55 862 32 823 0.0 1042
Msa1179280 MtrunA17_Chr1g0191921 57.750 871 337 9 2 862 9 858 0.0 1007
Msa1179280 MtrunA17_Chr7g0272791 56.713 864 341 10 12 862 24 867 0.0 993
Msa1179280 MtrunA17_Chr1g0205611 55.300 868 351 10 12 862 9 856 0.0 982
Msa1179280 MtrunA17_Chr8g0344201 45.122 820 436 10 50 861 113 926 0.0 719
Msa1179280 MtrunA17_Chr8g0344241 81.519 395 73 0 468 862 67 461 0.0 694
Msa1179280 MtrunA17_Chr8g0344241 71.667 60 17 0 287 346 9 68 3.92e-20 94.7
Msa1179280 MtrunA17_Chr3g0118651 42.995 828 431 14 54 862 98 903 0.0 650
Msa1179280 MtrunA17_Chr8g0377101 41.990 824 444 14 57 862 109 916 0.0 637
Msa1179280 MtrunA17_Chr3g0118641 43.686 776 417 12 98 862 136 902 0.0 637
Msa1179280 MtrunA17_Chr4g0047281 42.663 811 426 12 60 861 114 894 0.0 637
Msa1179280 MtrunA17_Chr8g0338451 40.629 827 439 15 49 845 46 850 0.0 624
Msa1179280 MtrunA17_Chr4g0033171 44.613 724 375 12 152 862 15 725 0.0 610
Msa1179280 MtrunA17_Chr3g0118621 42.280 842 444 15 41 862 46 865 0.0 603
Msa1179280 MtrunA17_Chr6g0471951 39.804 510 260 8 315 820 11 477 2.34e-124 384
Msa1179280 MtrunA17_Chr7g0218231 62.393 117 43 1 516 631 16 132 1.55e-42 151
Msa1179280 MtrunA17_Chr6g0468081 58.427 89 36 1 544 631 1 89 4.56e-27 105
Msa1179280 MtrunA17_Chr4g0047271 39.560 91 55 0 771 861 1 91 2.01e-16 75.5
Msa1179280 MtrunA17_Chr3g0137991 39.370 127 57 4 738 862 1 109 1.41e-15 73.6
Msa1179280 MtrunA17_Chr2g0277191 51.786 56 27 0 735 790 58 113 3.32e-13 67.0
Msa1179280 MtrunA17_Chr7g0272781 44.444 63 34 1 754 816 8 69 1.65e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179280 AT1G55020.1 54.325 867 358 11 9 862 18 859 0.0 978
Msa1179280 AT3G22400.1 53.829 875 363 12 9 862 32 886 0.0 957
Msa1179280 AT1G72520.1 43.605 821 447 9 50 862 114 926 0.0 710
Msa1179280 AT1G17420.1 43.447 824 443 10 50 862 108 919 0.0 701
Msa1179280 AT3G45140.1 42.130 845 445 18 35 862 79 896 0.0 634
Msa1179280 AT3G45140.2 43.880 768 398 16 111 862 4 754 0.0 620
Msa1179280 AT1G67560.1 41.596 827 456 15 50 862 104 917 0.0 612

Find 227 sgRNAs with CRISPR-Local

Find 628 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATGCAGCTGTTAATTT+TGG 0.155837 8_1:-12604252 Msa1179280:CDS
ATTCTGAACTCCAAGCATTT+TGG 0.213611 8_1:-12604392 Msa1179280:CDS
CTATAATGGTCAAGTCAATT+AGG 0.235454 8_1:+12604085 None:intergenic
ATATCATTAGAAACATTTAA+TGG 0.260713 8_1:+12608092 None:intergenic
GTTACCTCCGCACCGATTCT+AGG 0.266335 8_1:-12607130 Msa1179280:CDS
TAGTCCAAACTCTTACTTTA+GGG 0.267766 8_1:-12607936 Msa1179280:five_prime_UTR
TCACTGTCCCCTTCACCTTT+TGG 0.268716 8_1:+12607652 None:intergenic
TGCCTATCTAGCTTGCTCTT+TGG 0.284977 8_1:+12605656 None:intergenic
ATAGTCCAAACTCTTACTTT+AGG 0.294163 8_1:-12607937 Msa1179280:five_prime_UTR
AATAGTATCTCCATCTAAAA+AGG 0.294205 8_1:-12603814 Msa1179280:exon
TTAGAGGCTTTCAAGAGATT+TGG 0.301087 8_1:-12603979 Msa1179280:CDS
AGCTTAGCTCGTCCCGTTAT+TGG 0.301482 8_1:-12606641 Msa1179280:CDS
GATTGATTGTTATAGTGTTT+TGG 0.302080 8_1:-12603699 Msa1179280:three_prime_UTR
CTGCAGATGGATTAGAGATA+TGG 0.306273 8_1:-12604485 Msa1179280:CDS
AGAGAATTGAAGGTGATCTT+TGG 0.324769 8_1:-12604020 Msa1179280:CDS
TGGATACCTTGAATGACTTT+AGG 0.334103 8_1:+12605979 None:intergenic
TTCTGATTCACAACCATTAG+AGG 0.338910 8_1:-12603995 Msa1179280:CDS
AGTTCCTTGAACAACGGTAT+AGG 0.342436 8_1:+12606042 None:intergenic
CTTTAGGTGGTGGAAACTTA+AGG 0.346113 8_1:+12605995 None:intergenic
ATCTAGAGGTGTGGCTCTTA+AGG 0.350357 8_1:-12604559 Msa1179280:intron
CTGTTCTTTGGTTATTGTGC+TGG 0.354337 8_1:+12605616 None:intergenic
GGACTATATATCTTATGTTT+CGG 0.355812 8_1:+12607953 None:intergenic
ACAGGTGGATTCAAGGTTCT+TGG 0.357260 8_1:-12607573 Msa1179280:CDS
GGAATAATGATGAGACTCTA+AGG 0.359551 8_1:-12603918 Msa1179280:CDS
TGCTGTATTATATAAGGATT+GGG 0.361705 8_1:-12604849 Msa1179280:CDS
ATTGTCTGCTGTATTATATA+AGG 0.364894 8_1:-12604855 Msa1179280:CDS
TGACACCTACGGTTCAATCT+TGG 0.367124 8_1:-12607529 Msa1179280:CDS
CTTCCAAGAGATGAATCATT+TGG 0.368825 8_1:-12606249 Msa1179280:CDS
TCTTGTCTATAGTAGACTAA+TGG 0.377121 8_1:+12606770 None:intergenic
TGAGTTGCAAACAAAGTTGA+TGG 0.379958 8_1:+12606967 None:intergenic
CATTCATCATAGCAACAAAT+AGG 0.380660 8_1:-12605024 Msa1179280:CDS
ACACTTGCACCACCCTCATA+TGG 0.380883 8_1:-12604287 Msa1179280:CDS
GACACCTACGGTTCAATCTT+GGG 0.384321 8_1:-12607528 Msa1179280:CDS
TGACCAAATGATTCATCTCT+TGG 0.388343 8_1:+12606246 None:intergenic
GGAGCCCTAAAGTAAGAGTT+TGG 0.389028 8_1:+12607932 None:intergenic
CAAGAGATTTGGAACAAAGT+TGG 0.394650 8_1:-12603968 Msa1179280:CDS
CTGCTGTATTATATAAGGAT+TGG 0.398026 8_1:-12604850 Msa1179280:CDS
ATCAAGTATGTACAATTTGT+TGG 0.404374 8_1:+12605432 None:intergenic
GGAAAGTAAATATCACTAAC+AGG 0.406097 8_1:+12605250 None:intergenic
TTTAGGTGGTGGAAACTTAA+GGG 0.406321 8_1:+12605996 None:intergenic
CAAGTTCTTTCCAAAATGCT+TGG 0.406902 8_1:+12604382 None:intergenic
TCTAATCCATCTGCAGCATA+AGG 0.407144 8_1:+12604492 None:intergenic
AAAGTGCAAAACAAATTTGC+TGG 0.409435 8_1:-12607714 Msa1179280:five_prime_UTR
TATAATGGTCAAGTCAATTA+GGG 0.409856 8_1:+12604086 None:intergenic
GCTTCAACACCATCACTTGC+AGG 0.410303 8_1:+12605229 None:intergenic
ATAGTAAGTGTTGCAATTCA+TGG 0.411489 8_1:+12607818 None:intergenic
GAAGGATAAAGCAAAGTATA+CGG 0.412453 8_1:+12603871 None:intergenic
GAGACTCTAAGGAATCGATA+TGG 0.416853 8_1:-12603907 Msa1179280:CDS
GTCAATCCTTCCTCACTTGA+AGG 0.416919 8_1:+12603853 None:intergenic
GTTCCTTGAACAACGGTATA+GGG 0.417622 8_1:+12606043 None:intergenic
AATCTCTTGAAAGCCTCTAA+TGG 0.418384 8_1:+12603982 None:intergenic
CATCCTCAGGCTGATAGCTT+TGG 0.418449 8_1:-12605274 Msa1179280:CDS
AAAGTATACGGCATCTTAAC+CGG 0.420728 8_1:+12603883 None:intergenic
CTATTTGTTGCTATGATGAA+TGG 0.420998 8_1:+12605025 None:intergenic
AATAGCAACTTGCAAGCCAC+TGG 0.421553 8_1:-12607764 Msa1179280:five_prime_UTR
AGTTTGCTAAGTTCATTAGT+AGG 0.422127 8_1:+12606069 None:intergenic
AAGCTATCAGCCTGAGGATG+TGG 0.423011 8_1:+12605277 None:intergenic
CTATCTAGCTTGCTCTTTGG+TGG 0.425209 8_1:+12605659 None:intergenic
CTCTAACCGGTGCGATGCAC+GGG 0.425214 8_1:+12608032 None:intergenic
CAACCATCAATGTAACTAAA+GGG 0.425870 8_1:+12607872 None:intergenic
GATAGTGACATGGGAATTCC+AGG 0.428040 8_1:-12607070 Msa1179280:CDS
TAGCCCTATACCGTTGTTCA+AGG 0.430006 8_1:-12606046 Msa1179280:CDS
CACCAAAGAGCAAGCTAGAT+AGG 0.433954 8_1:-12605658 Msa1179280:CDS
TCAACTTTGTTTGCAACTCA+TGG 0.435514 8_1:-12606964 Msa1179280:CDS
TTACATTGATGGTTGACCTT+AGG 0.435759 8_1:-12607864 Msa1179280:five_prime_UTR
AAGTTGATGGTTCCATGGTT+AGG 0.438897 8_1:+12606980 None:intergenic
TGATGGAACTTTGAAGCCAT+TGG 0.439270 8_1:-12605317 Msa1179280:CDS
AGAAAGTGGAAAAGGTAAAG+TGG 0.439449 8_1:-12607179 Msa1179280:CDS
CCACCACCTAAAGTCATTCA+AGG 0.440711 8_1:-12605985 Msa1179280:intron
ACACATCATCAAAAGAATTC+AGG 0.441238 8_1:-12605811 Msa1179280:intron
AGTTTATAACCTTTCTTAGC+TGG 0.442387 8_1:+12606569 None:intergenic
TCTTGACAAGACCTCTATAA+TGG 0.447317 8_1:+12604071 None:intergenic
TGGGCCGTTCAGTGGCTCTC+AGG 0.448781 8_1:-12607509 Msa1179280:CDS
TATTGAGAAGACGTTCTTGA+TGG 0.451460 8_1:-12604894 Msa1179280:CDS
TAGTAGAACTAGACTCTAAC+CGG 0.453174 8_1:+12608019 None:intergenic
TTCTCAATATAAAATGCTCC+TGG 0.455625 8_1:+12607052 None:intergenic
TTTACAAGAGAGATGATTGC+TGG 0.455862 8_1:-12605843 Msa1179280:CDS
AAATATCACAGGTGGATTCA+AGG 0.457407 8_1:-12607580 Msa1179280:CDS
TCGTAGCATATGCCTTTGTA+TGG 0.459870 8_1:+12605362 None:intergenic
CTTAGAAAGCTCATCATACT+CGG 0.462104 8_1:+12604155 None:intergenic
TAATAACATGACCATGGATA+GGG 0.462761 8_1:+12603735 None:intergenic
CGGCCTTCGCCTTCTGATAG+AGG 0.462912 8_1:-12604520 Msa1179280:CDS
AAAGCTGCATTTGAAATCAA+TGG 0.475603 8_1:+12603625 None:intergenic
ATGACCATGGATAGGGGTTG+AGG 0.475928 8_1:+12603742 None:intergenic
ATGGTGTTGAAGCTTCAATT+TGG 0.479485 8_1:-12605219 Msa1179280:CDS
GGACAGGTAAACGTGAAGAA+TGG 0.481824 8_1:-12606721 Msa1179280:CDS
TAGTAAGTGTTGCAATTCAT+GGG 0.484936 8_1:+12607819 None:intergenic
CTGAAGACTTTACGAGGAGA+TGG 0.485246 8_1:-12606743 Msa1179280:CDS
TGGAAAGAACTTGTAGAGGT+TGG 0.486789 8_1:-12604372 Msa1179280:CDS
TCAACCATCAATGTAACTAA+AGG 0.486876 8_1:+12607871 None:intergenic
ATGTTTCGGTTCAACGGAAG+AGG 0.489681 8_1:+12607967 None:intergenic
CACTGTCCAGCTCCTAGAAT+CGG 0.493765 8_1:+12607118 None:intergenic
GTGTTGGATCCTCCAATAAC+GGG 0.494877 8_1:+12606629 None:intergenic
CGAAGGCCGTGTGGGGAAGT+AGG 0.495559 8_1:+12604534 None:intergenic
GCTAAGCAGCCCACATCCTC+AGG 0.499529 8_1:-12605287 Msa1179280:CDS
TTAGCTCGTCCCGTTATTGG+AGG 0.499661 8_1:-12606638 Msa1179280:CDS
ATGTGGGCTGCTTAGCTCAA+TGG 0.499826 8_1:+12605294 None:intergenic
TTGAAATCAATGGTCTAGAA+TGG 0.501959 8_1:+12603635 None:intergenic
TTCAATCTTGGGCCGTTCAG+TGG 0.504725 8_1:-12607517 Msa1179280:CDS
GGAAGTAGAAGCTTATGAAT+AGG 0.506154 8_1:+12604983 None:intergenic
CTTTATCCTTCAAGTGAGGA+AGG 0.508215 8_1:-12603859 Msa1179280:CDS
TGCCTAATGATCTACTCAAA+AGG 0.508255 8_1:-12604808 Msa1179280:intron
CTGCTTAGCTCAATGGCCAA+TGG 0.509548 8_1:+12605301 None:intergenic
GACAGGTAAACGTGAAGAAT+GGG 0.514304 8_1:-12606720 Msa1179280:CDS
CTAATCCATCTGCAGCATAA+GGG 0.518394 8_1:+12604493 None:intergenic
TACCTCGGACAGAGAATTGA+AGG 0.519761 8_1:-12604030 Msa1179280:CDS
AATGGAGCTGGTGTTTCACT+TGG 0.519813 8_1:+12606788 None:intergenic
TCCATTTCACAGAAGCCAAA+AGG 0.520125 8_1:-12607667 Msa1179280:CDS
GGTGTTGGATCCTCCAATAA+CGG 0.521313 8_1:+12606628 None:intergenic
AAACAAAGTTGATGGTTCCA+TGG 0.521970 8_1:+12606975 None:intergenic
AATTGACTTGACCATTATAG+AGG 0.522463 8_1:-12604082 Msa1179280:CDS
TATGGGCTGTTATTAAGTCA+TGG 0.522967 8_1:-12604467 Msa1179280:CDS
TGACCATGGATAGGGGTTGA+GGG 0.524941 8_1:+12603743 None:intergenic
AGAAGATTAATGCCTAAGAA+AGG 0.525519 8_1:-12604183 Msa1179280:CDS
TATATTGAGAATTTCATGCT+AGG 0.525987 8_1:-12607040 Msa1179280:CDS
ATATTTGTAGAAAGTGGAAA+AGG 0.528541 8_1:-12607187 Msa1179280:intron
GTGCTGAAGCAATCCATATG+AGG 0.530017 8_1:+12604274 None:intergenic
TGCACTTGCAAGGAGTGTCT+TGG 0.531139 8_1:-12604933 Msa1179280:CDS
ATGGGCTGTTATTAAGTCAT+GGG 0.531811 8_1:-12604466 Msa1179280:CDS
GGAAAGAGATCGTTTCTTGA+AGG 0.532072 8_1:-12607157 Msa1179280:CDS
TATCTTATGTTTCGGTTCAA+CGG 0.532427 8_1:+12607961 None:intergenic
TCCAAGACGTCAACAGCCTA+AGG 0.534304 8_1:+12607848 None:intergenic
GATATCAACGTCCTCACCGC+TGG 0.534632 8_1:-12607606 Msa1179280:CDS
ATAATAACATGACCATGGAT+AGG 0.536860 8_1:+12603734 None:intergenic
TGCAGATGGATTAGAGATAT+GGG 0.538537 8_1:-12604484 Msa1179280:CDS
TCACAGAAGCCAAAAGGTGA+AGG 0.539609 8_1:-12607661 Msa1179280:CDS
TTTCTTAGCTGGTTTCCTGC+CGG 0.541247 8_1:+12606580 None:intergenic
GGACAGTGATATTGATGCAT+AGG 0.541977 8_1:-12607638 Msa1179280:CDS
GAAAGTGGAAAAGGTAAAGT+GGG 0.542323 8_1:-12607178 Msa1179280:CDS
ACTCTAACCGGTGCGATGCA+CGG 0.544186 8_1:+12608031 None:intergenic
TCATCAAAGGTGTTAAACTC+TGG 0.547395 8_1:+12606126 None:intergenic
TTAGAAAGCTCATCATACTC+GGG 0.548951 8_1:+12604156 None:intergenic
GCTTTCTAAGAACTATCAAA+AGG 0.551115 8_1:-12604142 Msa1179280:CDS
GACTACCCTTATGCTGCAGA+TGG 0.551288 8_1:-12604498 Msa1179280:CDS
AGCTCTATATTTGACACCTA+CGG 0.553269 8_1:-12607540 Msa1179280:CDS
GGCAGGAAACCAGCTAAGAA+AGG 0.554760 8_1:-12606578 Msa1179280:intron
CAACTACATAAGCTTTAGCA+AGG 0.555120 8_1:+12605194 None:intergenic
CTATAGTAGACTAATGGAGC+TGG 0.556484 8_1:+12606776 None:intergenic
CACAGAAGCCAAAAGGTGAA+GGG 0.557115 8_1:-12607660 Msa1179280:CDS
AGCTTCAACAAAACATGGGT+GGG 0.558582 8_1:-12605595 Msa1179280:CDS
TTTCTTGTTATCTAGAGGTG+TGG 0.558961 8_1:-12604568 Msa1179280:intron
TATACCAATGGCTGATGAGT+TGG 0.561542 8_1:+12605152 None:intergenic
AAGCTAGATAGGCAACTCTA+CGG 0.562069 8_1:-12605647 Msa1179280:CDS
AAGGAACTCCTCAGAACTGA+TGG 0.562150 8_1:-12606027 Msa1179280:CDS
CCTTGAATGACTTTAGGTGG+TGG 0.562607 8_1:+12605985 None:intergenic
AGAACAGCTTCAACAAAACA+TGG 0.564781 8_1:-12605600 Msa1179280:CDS
ACCGCTGGTTTAAATATCAC+AGG 0.565086 8_1:-12607591 Msa1179280:CDS
CACCTTGCCTTACCCTCGAA+GGG 0.565890 8_1:-12606609 Msa1179280:CDS
AACAATCAATCAAACATACA+TGG 0.567092 8_1:+12603711 None:intergenic
TCAGAAGGCGAAGGCCGTGT+GGG 0.568063 8_1:+12604526 None:intergenic
ATTGAGAAGACGTTCTTGAT+GGG 0.569095 8_1:-12604893 Msa1179280:CDS
AGCTATCAGCCTGAGGATGT+GGG 0.574193 8_1:+12605278 None:intergenic
ATCACCAACTCATCAGCCAT+TGG 0.576161 8_1:-12605156 Msa1179280:intron
TGAAGACTTTACGAGGAGAT+GGG 0.579763 8_1:-12606742 Msa1179280:CDS
AAATGCACGCACATCATCAA+AGG 0.579942 8_1:+12606113 None:intergenic
ATTTACTTTCCTGCAAGTGA+TGG 0.583346 8_1:-12605238 Msa1179280:CDS
GTAAGTGCAGATGTTAATGC+AGG 0.583635 8_1:+12606165 None:intergenic
GAAAAGTGAATCAATCTGGA+TGG 0.587432 8_1:-12605881 Msa1179280:intron
ATTGATGCATAGGAATGTGT+TGG 0.588062 8_1:-12607628 Msa1179280:CDS
ACACCTTGCCTTACCCTCGA+AGG 0.589170 8_1:-12606610 Msa1179280:CDS
CTATGAATAACATACGAAGA+AGG 0.592875 8_1:-12603775 Msa1179280:three_prime_UTR
TCTAAGGAATCGATATGGAC+CGG 0.593095 8_1:-12603902 Msa1179280:CDS
TCGAGGGTAAGGCAAGGTGT+TGG 0.593510 8_1:+12606613 None:intergenic
CTGAGGAGTTCCTTGAACAA+CGG 0.593569 8_1:+12606036 None:intergenic
ATTAGTGCTACTAGCGCTGA+TGG 0.593941 8_1:-12607483 Msa1179280:intron
CTTGAAGATATTCCTAACCA+TGG 0.597036 8_1:-12606992 Msa1179280:CDS
ATAGCAACTTGCAAGCCACT+GGG 0.598464 8_1:-12607763 Msa1179280:five_prime_UTR
ATCAGAAGGCGAAGGCCGTG+TGG 0.599096 8_1:+12604525 None:intergenic
GAGGAAGGATTGACTTGCAG+AGG 0.599561 8_1:-12603844 Msa1179280:CDS
ACCATCAATGTAACTAAAGG+GGG 0.599848 8_1:+12607874 None:intergenic
TAGAAAGCTCATCATACTCG+GGG 0.602660 8_1:+12604157 None:intergenic
CACCTTCAATTCTCTGTCCG+AGG 0.602919 8_1:+12604028 None:intergenic
TTAGGTGGTGGAAACTTAAG+GGG 0.604953 8_1:+12605997 None:intergenic
AGCTCCTAGAATCGGTGCGG+AGG 0.607434 8_1:+12607126 None:intergenic
GATATGGATATATTGAGTCA+TGG 0.608683 8_1:+12605407 None:intergenic
TTTCAATGGGATAGTGACAT+GGG 0.609030 8_1:-12607079 Msa1179280:CDS
ATTCCCTCAACCCCTATCCA+TGG 0.611269 8_1:-12603746 Msa1179280:three_prime_UTR
ACTTTACGAGGAGATGGGAC+AGG 0.611272 8_1:-12606737 Msa1179280:CDS
CATGGATAATAACATGACCA+TGG 0.612525 8_1:+12603729 None:intergenic
AACAAATAGGCATCTTAGTG+TGG 0.616014 8_1:-12605011 Msa1179280:CDS
TTCATTGTGTCACGATAGTG+CGG 0.616157 8_1:+12604962 None:intergenic
AAGGGTAGTCCTCTATCAGA+AGG 0.619758 8_1:+12604511 None:intergenic
AATAACATGACCATGGATAG+GGG 0.620015 8_1:+12603736 None:intergenic
ACAGAAGCCAAAAGGTGAAG+GGG 0.621182 8_1:-12607659 Msa1179280:CDS
CAGCTTCAACAAAACATGGG+TGG 0.621253 8_1:-12605596 Msa1179280:CDS
TGCTGAAGCAATCCATATGA+GGG 0.621259 8_1:+12604275 None:intergenic
ACTCAATATATCCATATCTG+AGG 0.622340 8_1:-12605402 Msa1179280:CDS
ACCTGTGATATTTAAACCAG+CGG 0.625148 8_1:+12607590 None:intergenic
CAGAAGGCGAAGGCCGTGTG+GGG 0.628083 8_1:+12604527 None:intergenic
GAGTGTCTTGGTAAATGCAG+AGG 0.628961 8_1:-12604921 Msa1179280:CDS
GTGCTTCACCATCAGTTCTG+AGG 0.630572 8_1:+12606019 None:intergenic
AACCATCAATGTAACTAAAG+GGG 0.632517 8_1:+12607873 None:intergenic
ACGGCCCAAGATTGAACCGT+AGG 0.632707 8_1:+12607524 None:intergenic
TGTCAAATATAGAGCTAGTG+AGG 0.633417 8_1:+12607547 None:intergenic
TTATTCATAGAATTACTACA+AGG 0.633858 8_1:+12603788 None:intergenic
TGAACATTAATGCACTTGCA+AGG 0.638089 8_1:-12604943 Msa1179280:CDS
CAGATCCTAAAAGTGAGAGA+CGG 0.638615 8_1:-12606287 Msa1179280:CDS
CATCAATGTAACTAAAGGGG+GGG 0.639683 8_1:+12607876 None:intergenic
AGTGTCTTGGTAAATGCAGA+GGG 0.642136 8_1:-12604920 Msa1179280:CDS
GTAAACGTGAAGAATGGGAA+AGG 0.646192 8_1:-12606715 Msa1179280:CDS
TTTGCTTTATCCTTCAAGTG+AGG 0.646310 8_1:-12603863 Msa1179280:CDS
CCATCAATGTAACTAAAGGG+GGG 0.647108 8_1:+12607875 None:intergenic
AAATGCAGCTGACCATACAA+AGG 0.649192 8_1:-12605374 Msa1179280:CDS
CTATGATGTCTACAATGATG+TGG 0.649661 8_1:-12606684 Msa1179280:CDS
GCTGGTTTAAATATCACAGG+TGG 0.653722 8_1:-12607588 Msa1179280:CDS
TTAAGAATGTAACCTCCGTA+CGG 0.656295 8_1:+12604222 None:intergenic
ACCTTGCCTTACCCTCGAAG+GGG 0.659200 8_1:-12606608 Msa1179280:CDS
ATACCTTGAATGACTTTAGG+TGG 0.660488 8_1:+12605982 None:intergenic
GCTTCTGATGAACAATACCT+CGG 0.660873 8_1:-12604045 Msa1179280:CDS
TCAACCTGAGAGCCACTGAA+CGG 0.665209 8_1:+12607505 None:intergenic
TTTGGACAATATCCGTACGG+AGG 0.665441 8_1:-12604234 Msa1179280:CDS
GAACTTGTAGAGGTTGGTCA+CGG 0.669529 8_1:-12604366 Msa1179280:CDS
AATGGCTGATGAGTTGGTGA+TGG 0.671659 8_1:+12605158 None:intergenic
AGTAAGTGTTGCAATTCATG+GGG 0.674212 8_1:+12607820 None:intergenic
AGTCCTCTATCAGAAGGCGA+AGG 0.676314 8_1:+12604517 None:intergenic
TATGATGTCTACAATGATGT+GGG 0.681464 8_1:-12606683 Msa1179280:CDS
CCTTGCCTTACCCTCGAAGG+GGG 0.681885 8_1:-12606607 Msa1179280:CDS
TCCAGCTCCTAGAATCGGTG+CGG 0.683704 8_1:+12607123 None:intergenic
GAACAGCTTCAACAAAACAT+GGG 0.695205 8_1:-12605599 Msa1179280:CDS
TGATATTTAAACCAGCGGTG+AGG 0.698360 8_1:+12607595 None:intergenic
GGACCAAAGCTATCAGCCTG+AGG 0.704451 8_1:+12605271 None:intergenic
TATTCATAGAATTACTACAA+GGG 0.705695 8_1:+12603789 None:intergenic
AAGGATCCTACTTCCCCACA+CGG 0.713360 8_1:-12604540 Msa1179280:CDS
GAAGAACTGAAGACTTTACG+AGG 0.717242 8_1:-12606749 Msa1179280:CDS
AGAAAGCTCATCATACTCGG+GGG 0.733263 8_1:+12604158 None:intergenic
TGAAGCAATCCATATGAGGG+TGG 0.741108 8_1:+12604278 None:intergenic
GCAAATGAAAGAAAACCCAG+TGG 0.781840 8_1:+12607748 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTATATATTTTTTAAT+AGG - chr8_1:12606315-12606334 Msa1179280:intron 0.0%
!!! TAAATTATATATTTTTTAAT+AGG - chr8_1:12606315-12606334 Msa1179280:intron 0.0%
!! TTTGATATCAATATTATAAA+CGG + chr8_1:12607160-12607179 None:intergenic 10.0%
!! TTTGATATCAATATTATAAA+CGG + chr8_1:12607160-12607179 None:intergenic 10.0%
!! ATATCATTAGAAACATTTAA+TGG + chr8_1:12603690-12603709 None:intergenic 15.0%
!!! AGTTAGTATATTATGTTTTA+AGG - chr8_1:12605256-12605275 Msa1179280:CDS 15.0%
!!! TTATGATGGAATTATTTTTT+GGG - chr8_1:12605371-12605390 Msa1179280:CDS 15.0%
!!! CAATATTCTTATTTTAGTTT+TGG + chr8_1:12606030-12606049 None:intergenic 15.0%
!! AAATATATCAAGCAATAATA+AGG + chr8_1:12606087-12606106 None:intergenic 15.0%
!! ATATCATTAGAAACATTTAA+TGG + chr8_1:12603690-12603709 None:intergenic 15.0%
!!! AGTTAGTATATTATGTTTTA+AGG - chr8_1:12605256-12605275 Msa1179280:CDS 15.0%
!!! TTATGATGGAATTATTTTTT+GGG - chr8_1:12605371-12605390 Msa1179280:CDS 15.0%
!!! CAATATTCTTATTTTAGTTT+TGG + chr8_1:12606030-12606049 None:intergenic 15.0%
!! AAATATATCAAGCAATAATA+AGG + chr8_1:12606087-12606106 None:intergenic 15.0%
!!! TTTTTTAGAGTTTCATGTAT+AGG + chr8_1:12603726-12603745 None:intergenic 20.0%
!!! ATACAAAGTTCATTTTCAAT+GGG - chr8_1:12604687-12604706 Msa1179280:intron 20.0%
!!! ATTTTTCATAATTACCTTGT+TGG + chr8_1:12604884-12604903 None:intergenic 20.0%
!! CTATGTTTATATTTACTCAA+TGG + chr8_1:12604962-12604981 None:intergenic 20.0%
!!! GTTATGATGGAATTATTTTT+TGG - chr8_1:12605370-12605389 Msa1179280:CDS 20.0%
!!! ATTTTTAGTCATGCAAAATT+TGG - chr8_1:12605833-12605852 Msa1179280:CDS 20.0%
!! TAAAAAACTAGGATGAAAAA+TGG + chr8_1:12606056-12606075 None:intergenic 20.0%
!! AGGTTAACAATTAAAAAACT+AGG + chr8_1:12606067-12606086 None:intergenic 20.0%
!! TTGCTTGATATATTTAATGT+AGG - chr8_1:12606092-12606111 Msa1179280:CDS 20.0%
!! GATATTAATGTATAACTCAA+TGG + chr8_1:12606695-12606714 None:intergenic 20.0%
!! TATATTCAGTAGTTAAAAAG+AGG - chr8_1:12607023-12607042 Msa1179280:CDS 20.0%
!!! TTTTAATGTCTAAACATCAA+TGG - chr8_1:12607092-12607111 Msa1179280:CDS 20.0%
!! TATTCATAGAATTACTACAA+GGG + chr8_1:12607993-12608012 None:intergenic 20.0%
!! TTATTCATAGAATTACTACA+AGG + chr8_1:12607994-12608013 None:intergenic 20.0%
!!! TTTTTTAGAGTTTCATGTAT+AGG + chr8_1:12603726-12603745 None:intergenic 20.0%
!!! ATACAAAGTTCATTTTCAAT+GGG - chr8_1:12604687-12604706 Msa1179280:intron 20.0%
!!! ATTTTTCATAATTACCTTGT+TGG + chr8_1:12604884-12604903 None:intergenic 20.0%
!! CTATGTTTATATTTACTCAA+TGG + chr8_1:12604962-12604981 None:intergenic 20.0%
!!! GTTATGATGGAATTATTTTT+TGG - chr8_1:12605370-12605389 Msa1179280:CDS 20.0%
!!! ATTTTTAGTCATGCAAAATT+TGG - chr8_1:12605833-12605852 Msa1179280:CDS 20.0%
!! TAAAAAACTAGGATGAAAAA+TGG + chr8_1:12606056-12606075 None:intergenic 20.0%
!! AGGTTAACAATTAAAAAACT+AGG + chr8_1:12606067-12606086 None:intergenic 20.0%
!! TTGCTTGATATATTTAATGT+AGG - chr8_1:12606092-12606111 Msa1179280:CDS 20.0%
!! GATATTAATGTATAACTCAA+TGG + chr8_1:12606695-12606714 None:intergenic 20.0%
!! TATATTCAGTAGTTAAAAAG+AGG - chr8_1:12607023-12607042 Msa1179280:CDS 20.0%
!!! TTTTAATGTCTAAACATCAA+TGG - chr8_1:12607092-12607111 Msa1179280:CDS 20.0%
!! TATTCATAGAATTACTACAA+GGG + chr8_1:12607993-12608012 None:intergenic 20.0%
!! TTATTCATAGAATTACTACA+AGG + chr8_1:12607994-12608013 None:intergenic 20.0%
! GGACTATATATCTTATGTTT+CGG + chr8_1:12603829-12603848 None:intergenic 25.0%
! ATATTTGTAGAAAGTGGAAA+AGG - chr8_1:12604592-12604611 Msa1179280:intron 25.0%
!! CATACAAAGTTCATTTTCAA+TGG - chr8_1:12604686-12604705 Msa1179280:intron 25.0%
! TATATTGAGAATTTCATGCT+AGG - chr8_1:12604739-12604758 Msa1179280:intron 25.0%
!!! CAATGGTGTCAAATTAATTT+TGG + chr8_1:12604945-12604964 None:intergenic 25.0%
!! GACTAAAAATGTGTTTCTAA+TGG + chr8_1:12605823-12605842 None:intergenic 25.0%
!!! TTTTGAAAAGTGAATCAATC+TGG - chr8_1:12605894-12605913 Msa1179280:intron 25.0%
! ATCAAGTATGTACAATTTGT+TGG + chr8_1:12606350-12606369 None:intergenic 25.0%
!! ATCATTTTGTAAGAAAAGGA+AGG + chr8_1:12606446-12606465 None:intergenic 25.0%
!! TTCCTTTTCTTACAAAATGA+TGG - chr8_1:12606445-12606464 Msa1179280:intron 25.0%
!! TTCCATCATTTTGTAAGAAA+AGG + chr8_1:12606450-12606469 None:intergenic 25.0%
! GTCAATTGAATTTATACCAA+TGG + chr8_1:12606642-12606661 None:intergenic 25.0%
! TTAATATCTATATGTGTGAC+AGG - chr8_1:12606707-12606726 Msa1179280:CDS 25.0%
! ATTGTCTGCTGTATTATATA+AGG - chr8_1:12606924-12606943 Msa1179280:CDS 25.0%
! TGCTGTATTATATAAGGATT+GGG - chr8_1:12606930-12606949 Msa1179280:CDS 25.0%
! TAACTACTGAATATATGTCT+AGG + chr8_1:12607018-12607037 None:intergenic 25.0%
!! AAACGGAAAGTTTAAAATTG+CGG + chr8_1:12607143-12607162 None:intergenic 25.0%
!!! ATTAATCTTCTGCTTTTAGT+TGG + chr8_1:12607587-12607606 None:intergenic 25.0%
! TATAATGGTCAAGTCAATTA+GGG + chr8_1:12607696-12607715 None:intergenic 25.0%
!! TTTTAGATGGAGATACTATT+AGG + chr8_1:12607965-12607984 None:intergenic 25.0%
! AATAGTATCTCCATCTAAAA+AGG - chr8_1:12607965-12607984 Msa1179280:five_prime_UTR 25.0%
! AACAATCAATCAAACATACA+TGG + chr8_1:12608071-12608090 None:intergenic 25.0%
!! GATTGATTGTTATAGTGTTT+TGG - chr8_1:12608080-12608099 Msa1179280:five_prime_UTR 25.0%
! GGACTATATATCTTATGTTT+CGG + chr8_1:12603829-12603848 None:intergenic 25.0%
! ATATTTGTAGAAAGTGGAAA+AGG - chr8_1:12604592-12604611 Msa1179280:intron 25.0%
!! CATACAAAGTTCATTTTCAA+TGG - chr8_1:12604686-12604705 Msa1179280:intron 25.0%
! TATATTGAGAATTTCATGCT+AGG - chr8_1:12604739-12604758 Msa1179280:intron 25.0%
!!! CAATGGTGTCAAATTAATTT+TGG + chr8_1:12604945-12604964 None:intergenic 25.0%
!! GACTAAAAATGTGTTTCTAA+TGG + chr8_1:12605823-12605842 None:intergenic 25.0%
!!! TTTTGAAAAGTGAATCAATC+TGG - chr8_1:12605894-12605913 Msa1179280:intron 25.0%
! ATCAAGTATGTACAATTTGT+TGG + chr8_1:12606350-12606369 None:intergenic 25.0%
!! ATCATTTTGTAAGAAAAGGA+AGG + chr8_1:12606446-12606465 None:intergenic 25.0%
!! TTCCTTTTCTTACAAAATGA+TGG - chr8_1:12606445-12606464 Msa1179280:intron 25.0%
!! TTCCATCATTTTGTAAGAAA+AGG + chr8_1:12606450-12606469 None:intergenic 25.0%
! GTCAATTGAATTTATACCAA+TGG + chr8_1:12606642-12606661 None:intergenic 25.0%
! TTAATATCTATATGTGTGAC+AGG - chr8_1:12606707-12606726 Msa1179280:CDS 25.0%
! ATTGTCTGCTGTATTATATA+AGG - chr8_1:12606924-12606943 Msa1179280:CDS 25.0%
! TGCTGTATTATATAAGGATT+GGG - chr8_1:12606930-12606949 Msa1179280:CDS 25.0%
! TAACTACTGAATATATGTCT+AGG + chr8_1:12607018-12607037 None:intergenic 25.0%
!! AAACGGAAAGTTTAAAATTG+CGG + chr8_1:12607143-12607162 None:intergenic 25.0%
!!! ATTAATCTTCTGCTTTTAGT+TGG + chr8_1:12607587-12607606 None:intergenic 25.0%
! TATAATGGTCAAGTCAATTA+GGG + chr8_1:12607696-12607715 None:intergenic 25.0%
!! TTTTAGATGGAGATACTATT+AGG + chr8_1:12607965-12607984 None:intergenic 25.0%
! AATAGTATCTCCATCTAAAA+AGG - chr8_1:12607965-12607984 Msa1179280:five_prime_UTR 25.0%
! AACAATCAATCAAACATACA+TGG + chr8_1:12608071-12608090 None:intergenic 25.0%
!! GATTGATTGTTATAGTGTTT+TGG - chr8_1:12608080-12608099 Msa1179280:five_prime_UTR 25.0%
TATCTTATGTTTCGGTTCAA+CGG + chr8_1:12603821-12603840 None:intergenic 30.0%
ATAGTCCAAACTCTTACTTT+AGG - chr8_1:12603842-12603861 Msa1179280:CDS 30.0%
TAGTCCAAACTCTTACTTTA+GGG - chr8_1:12603843-12603862 Msa1179280:CDS 30.0%
AACCATCAATGTAACTAAAG+GGG + chr8_1:12603909-12603928 None:intergenic 30.0%
CAACCATCAATGTAACTAAA+GGG + chr8_1:12603910-12603929 None:intergenic 30.0%
TCAACCATCAATGTAACTAA+AGG + chr8_1:12603911-12603930 None:intergenic 30.0%
! TAGTAAGTGTTGCAATTCAT+GGG + chr8_1:12603963-12603982 None:intergenic 30.0%
! ATAGTAAGTGTTGCAATTCA+TGG + chr8_1:12603964-12603983 None:intergenic 30.0%
! TTTTCTTTCATTTGCCAGAA+AGG - chr8_1:12604039-12604058 Msa1179280:CDS 30.0%
AAAGTGCAAAACAAATTTGC+TGG - chr8_1:12604065-12604084 Msa1179280:CDS 30.0%
GTTATGAGTATAAATCCATG+TGG + chr8_1:12604392-12604411 None:intergenic 30.0%
ACTCACAAATTGAAGTGTAT+CGG + chr8_1:12604456-12604475 None:intergenic 30.0%
TGTGACATATTTGTAGAAAG+TGG - chr8_1:12604586-12604605 Msa1179280:intron 30.0%
TTCTCAATATAAAATGCTCC+TGG + chr8_1:12604730-12604749 None:intergenic 30.0%
TCTTGTCTATAGTAGACTAA+TGG + chr8_1:12605012-12605031 None:intergenic 30.0%
TATGATGTCTACAATGATGT+GGG - chr8_1:12605096-12605115 Msa1179280:intron 30.0%
AGTTTATAACCTTTCTTAGC+TGG + chr8_1:12605213-12605232 None:intergenic 30.0%
! TTTAAGGTATTTCTGCACAA+AGG - chr8_1:12605272-12605291 Msa1179280:CDS 30.0%
! AATGTTTTCATCCCTAGTAT+AGG - chr8_1:12605343-12605362 Msa1179280:CDS 30.0%
! ATGTTTTCATCCCTAGTATA+GGG - chr8_1:12605344-12605363 Msa1179280:CDS 30.0%
TCATAACATACCCTATACTA+GGG + chr8_1:12605357-12605376 None:intergenic 30.0%
ATCATAACATACCCTATACT+AGG + chr8_1:12605358-12605377 None:intergenic 30.0%
TAGTATAGGGTATGTTATGA+TGG - chr8_1:12605357-12605376 Msa1179280:CDS 30.0%
!! AGTTTGCTAAGTTCATTAGT+AGG + chr8_1:12605713-12605732 None:intergenic 30.0%
!!! TGAATTCTTTTGATGATGTG+TGG + chr8_1:12605969-12605988 None:intergenic 30.0%
ACACATCATCAAAAGAATTC+AGG - chr8_1:12605968-12605987 Msa1179280:intron 30.0%
GATATGGATATATTGAGTCA+TGG + chr8_1:12606375-12606394 None:intergenic 30.0%
ACTCAATATATCCATATCTG+AGG - chr8_1:12606377-12606396 Msa1179280:intron 30.0%
!! GCATTTATTTTCCTCAGATA+TGG + chr8_1:12606391-12606410 None:intergenic 30.0%
GGAAAGTAAATATCACTAAC+AGG + chr8_1:12606532-12606551 None:intergenic 30.0%
! CTATTTGTTGCTATGATGAA+TGG + chr8_1:12606757-12606776 None:intergenic 30.0%
CATTCATCATAGCAACAAAT+AGG - chr8_1:12606755-12606774 Msa1179280:CDS 30.0%
CTGCTGTATTATATAAGGAT+TGG - chr8_1:12606929-12606948 Msa1179280:CDS 30.0%
!! TACCTTTTGAGTAGATCATT+AGG + chr8_1:12606976-12606995 None:intergenic 30.0%
! CTAGGATCTAATGTTTTGTA+AGG + chr8_1:12607000-12607019 None:intergenic 30.0%
!! ATTTTGGAAAGAACTTGTAG+AGG - chr8_1:12607403-12607422 Msa1179280:intron 30.0%
! AATTTTGGACAATATCCGTA+CGG - chr8_1:12607542-12607561 Msa1179280:CDS 30.0%
AGAAGATTAATGCCTAAGAA+AGG - chr8_1:12607596-12607615 Msa1179280:CDS 30.0%
! GCTTTCTAAGAACTATCAAA+AGG - chr8_1:12607637-12607656 Msa1179280:CDS 30.0%
!!! TCAATTAGGGTGTCATTTTT+TGG + chr8_1:12607683-12607702 None:intergenic 30.0%
CTATAATGGTCAAGTCAATT+AGG + chr8_1:12607697-12607716 None:intergenic 30.0%
!! AATTGACTTGACCATTATAG+AGG - chr8_1:12607697-12607716 Msa1179280:exon 30.0%
TTGAACAAAAACTCACTCAA+AGG - chr8_1:12607840-12607859 Msa1179280:five_prime_UTR 30.0%
GAAGGATAAAGCAAAGTATA+CGG + chr8_1:12607911-12607930 None:intergenic 30.0%
CTATGAATAACATACGAAGA+AGG - chr8_1:12608004-12608023 Msa1179280:five_prime_UTR 30.0%
TAATAACATGACCATGGATA+GGG + chr8_1:12608047-12608066 None:intergenic 30.0%
ATAATAACATGACCATGGAT+AGG + chr8_1:12608048-12608067 None:intergenic 30.0%
TTGAAATCAATGGTCTAGAA+TGG + chr8_1:12608147-12608166 None:intergenic 30.0%
! AAAGCTGCATTTGAAATCAA+TGG + chr8_1:12608157-12608176 None:intergenic 30.0%
TATCTTATGTTTCGGTTCAA+CGG + chr8_1:12603821-12603840 None:intergenic 30.0%
ATAGTCCAAACTCTTACTTT+AGG - chr8_1:12603842-12603861 Msa1179280:CDS 30.0%
TAGTCCAAACTCTTACTTTA+GGG - chr8_1:12603843-12603862 Msa1179280:CDS 30.0%
AACCATCAATGTAACTAAAG+GGG + chr8_1:12603909-12603928 None:intergenic 30.0%
CAACCATCAATGTAACTAAA+GGG + chr8_1:12603910-12603929 None:intergenic 30.0%
TCAACCATCAATGTAACTAA+AGG + chr8_1:12603911-12603930 None:intergenic 30.0%
! TAGTAAGTGTTGCAATTCAT+GGG + chr8_1:12603963-12603982 None:intergenic 30.0%
! ATAGTAAGTGTTGCAATTCA+TGG + chr8_1:12603964-12603983 None:intergenic 30.0%
! TTTTCTTTCATTTGCCAGAA+AGG - chr8_1:12604039-12604058 Msa1179280:CDS 30.0%
AAAGTGCAAAACAAATTTGC+TGG - chr8_1:12604065-12604084 Msa1179280:CDS 30.0%
GTTATGAGTATAAATCCATG+TGG + chr8_1:12604392-12604411 None:intergenic 30.0%
ACTCACAAATTGAAGTGTAT+CGG + chr8_1:12604456-12604475 None:intergenic 30.0%
TGTGACATATTTGTAGAAAG+TGG - chr8_1:12604586-12604605 Msa1179280:intron 30.0%
TTCTCAATATAAAATGCTCC+TGG + chr8_1:12604730-12604749 None:intergenic 30.0%
TCTTGTCTATAGTAGACTAA+TGG + chr8_1:12605012-12605031 None:intergenic 30.0%
TATGATGTCTACAATGATGT+GGG - chr8_1:12605096-12605115 Msa1179280:intron 30.0%
AGTTTATAACCTTTCTTAGC+TGG + chr8_1:12605213-12605232 None:intergenic 30.0%
! TTTAAGGTATTTCTGCACAA+AGG - chr8_1:12605272-12605291 Msa1179280:CDS 30.0%
! AATGTTTTCATCCCTAGTAT+AGG - chr8_1:12605343-12605362 Msa1179280:CDS 30.0%
! ATGTTTTCATCCCTAGTATA+GGG - chr8_1:12605344-12605363 Msa1179280:CDS 30.0%
TCATAACATACCCTATACTA+GGG + chr8_1:12605357-12605376 None:intergenic 30.0%
ATCATAACATACCCTATACT+AGG + chr8_1:12605358-12605377 None:intergenic 30.0%
TAGTATAGGGTATGTTATGA+TGG - chr8_1:12605357-12605376 Msa1179280:CDS 30.0%
!! AGTTTGCTAAGTTCATTAGT+AGG + chr8_1:12605713-12605732 None:intergenic 30.0%
!!! TGAATTCTTTTGATGATGTG+TGG + chr8_1:12605969-12605988 None:intergenic 30.0%
ACACATCATCAAAAGAATTC+AGG - chr8_1:12605968-12605987 Msa1179280:intron 30.0%
GATATGGATATATTGAGTCA+TGG + chr8_1:12606375-12606394 None:intergenic 30.0%
ACTCAATATATCCATATCTG+AGG - chr8_1:12606377-12606396 Msa1179280:intron 30.0%
!! GCATTTATTTTCCTCAGATA+TGG + chr8_1:12606391-12606410 None:intergenic 30.0%
GGAAAGTAAATATCACTAAC+AGG + chr8_1:12606532-12606551 None:intergenic 30.0%
! CTATTTGTTGCTATGATGAA+TGG + chr8_1:12606757-12606776 None:intergenic 30.0%
CATTCATCATAGCAACAAAT+AGG - chr8_1:12606755-12606774 Msa1179280:CDS 30.0%
CTGCTGTATTATATAAGGAT+TGG - chr8_1:12606929-12606948 Msa1179280:CDS 30.0%
!! TACCTTTTGAGTAGATCATT+AGG + chr8_1:12606976-12606995 None:intergenic 30.0%
! CTAGGATCTAATGTTTTGTA+AGG + chr8_1:12607000-12607019 None:intergenic 30.0%
!! ATTTTGGAAAGAACTTGTAG+AGG - chr8_1:12607403-12607422 Msa1179280:intron 30.0%
! AATTTTGGACAATATCCGTA+CGG - chr8_1:12607542-12607561 Msa1179280:CDS 30.0%
AGAAGATTAATGCCTAAGAA+AGG - chr8_1:12607596-12607615 Msa1179280:CDS 30.0%
! GCTTTCTAAGAACTATCAAA+AGG - chr8_1:12607637-12607656 Msa1179280:CDS 30.0%
!!! TCAATTAGGGTGTCATTTTT+TGG + chr8_1:12607683-12607702 None:intergenic 30.0%
CTATAATGGTCAAGTCAATT+AGG + chr8_1:12607697-12607716 None:intergenic 30.0%
!! AATTGACTTGACCATTATAG+AGG - chr8_1:12607697-12607716 Msa1179280:exon 30.0%
TTGAACAAAAACTCACTCAA+AGG - chr8_1:12607840-12607859 Msa1179280:five_prime_UTR 30.0%
GAAGGATAAAGCAAAGTATA+CGG + chr8_1:12607911-12607930 None:intergenic 30.0%
CTATGAATAACATACGAAGA+AGG - chr8_1:12608004-12608023 Msa1179280:five_prime_UTR 30.0%
TAATAACATGACCATGGATA+GGG + chr8_1:12608047-12608066 None:intergenic 30.0%
ATAATAACATGACCATGGAT+AGG + chr8_1:12608048-12608067 None:intergenic 30.0%
TTGAAATCAATGGTCTAGAA+TGG + chr8_1:12608147-12608166 None:intergenic 30.0%
! AAAGCTGCATTTGAAATCAA+TGG + chr8_1:12608157-12608176 None:intergenic 30.0%
TAGTAGAACTAGACTCTAAC+CGG + chr8_1:12603763-12603782 None:intergenic 35.0%
ACCATCAATGTAACTAAAGG+GGG + chr8_1:12603908-12603927 None:intergenic 35.0%
! TTACATTGATGGTTGACCTT+AGG - chr8_1:12603915-12603934 Msa1179280:CDS 35.0%
! AGTAAGTGTTGCAATTCATG+GGG + chr8_1:12603962-12603981 None:intergenic 35.0%
ATTGATGCATAGGAATGTGT+TGG - chr8_1:12604151-12604170 Msa1179280:CDS 35.0%
ACCTGTGATATTTAAACCAG+CGG + chr8_1:12604192-12604211 None:intergenic 35.0%
! AAATATCACAGGTGGATTCA+AGG - chr8_1:12604199-12604218 Msa1179280:CDS 35.0%
TGTCAAATATAGAGCTAGTG+AGG + chr8_1:12604235-12604254 None:intergenic 35.0%
AGCTCTATATTTGACACCTA+CGG - chr8_1:12604239-12604258 Msa1179280:CDS 35.0%
AGAAAGTGGAAAAGGTAAAG+TGG - chr8_1:12604600-12604619 Msa1179280:intron 35.0%
GAAAGTGGAAAAGGTAAAGT+GGG - chr8_1:12604601-12604620 Msa1179280:intron 35.0%
! TTTTCAATGGGATAGTGACA+TGG - chr8_1:12604699-12604718 Msa1179280:intron 35.0%
TTTCAATGGGATAGTGACAT+GGG - chr8_1:12604700-12604719 Msa1179280:intron 35.0%
CTTGAAGATATTCCTAACCA+TGG - chr8_1:12604787-12604806 Msa1179280:intron 35.0%
!! AAACAAAGTTGATGGTTCCA+TGG + chr8_1:12604807-12604826 None:intergenic 35.0%
TGAGTTGCAAACAAAGTTGA+TGG + chr8_1:12604815-12604834 None:intergenic 35.0%
! TCAACTTTGTTTGCAACTCA+TGG - chr8_1:12604815-12604834 Msa1179280:CDS 35.0%
CTATGATGTCTACAATGATG+TGG - chr8_1:12605095-12605114 Msa1179280:intron 35.0%
CTTCCAAGAGATGAATCATT+TGG - chr8_1:12605530-12605549 Msa1179280:intron 35.0%
TGACCAAATGATTCATCTCT+TGG + chr8_1:12605536-12605555 None:intergenic 35.0%
!! TCATCAAAGGTGTTAAACTC+TGG + chr8_1:12605656-12605675 None:intergenic 35.0%
!! TTTAGGTGGTGGAAACTTAA+GGG + chr8_1:12605786-12605805 None:intergenic 35.0%
ATACCTTGAATGACTTTAGG+TGG + chr8_1:12605800-12605819 None:intergenic 35.0%
TGGATACCTTGAATGACTTT+AGG + chr8_1:12605803-12605822 None:intergenic 35.0%
GAAAAGTGAATCAATCTGGA+TGG - chr8_1:12605898-12605917 Msa1179280:intron 35.0%
TTTACAAGAGAGATGATTGC+TGG - chr8_1:12605936-12605955 Msa1179280:intron 35.0%
!! GTTTTGTTGAAGCTGTTCTT+TGG + chr8_1:12606178-12606197 None:intergenic 35.0%
AGAACAGCTTCAACAAAACA+TGG - chr8_1:12606179-12606198 Msa1179280:CDS 35.0%
GAACAGCTTCAACAAAACAT+GGG - chr8_1:12606180-12606199 Msa1179280:CDS 35.0%
ATTTACTTTCCTGCAAGTGA+TGG - chr8_1:12606541-12606560 Msa1179280:intron 35.0%
! ATGGTGTTGAAGCTTCAATT+TGG - chr8_1:12606560-12606579 Msa1179280:intron 35.0%
! CAACTACATAAGCTTTAGCA+AGG + chr8_1:12606588-12606607 None:intergenic 35.0%
AACAAATAGGCATCTTAGTG+TGG - chr8_1:12606768-12606787 Msa1179280:CDS 35.0%
GGAAGTAGAAGCTTATGAAT+AGG + chr8_1:12606799-12606818 None:intergenic 35.0%
TGAACATTAATGCACTTGCA+AGG - chr8_1:12606836-12606855 Msa1179280:intron 35.0%
TATTGAGAAGACGTTCTTGA+TGG - chr8_1:12606885-12606904 Msa1179280:intron 35.0%
ATTGAGAAGACGTTCTTGAT+GGG - chr8_1:12606886-12606905 Msa1179280:intron 35.0%
TGCCTAATGATCTACTCAAA+AGG - chr8_1:12606971-12606990 Msa1179280:CDS 35.0%
GAATATCCCATCTTAGATTG+AGG + chr8_1:12607068-12607087 None:intergenic 35.0%
! CAATCTAAGATGGGATATTC+AGG - chr8_1:12607068-12607087 Msa1179280:CDS 35.0%
TGTCTAAACATCAATGGTTG+TGG - chr8_1:12607098-12607117 Msa1179280:CDS 35.0%
! CTTCCTTTCTTGTTATCTAG+AGG - chr8_1:12607206-12607225 Msa1179280:intron 35.0%
ACACCTCTAGATAACAAGAA+AGG + chr8_1:12607212-12607231 None:intergenic 35.0%
! TTTCTTGTTATCTAGAGGTG+TGG - chr8_1:12607211-12607230 Msa1179280:intron 35.0%
!! TGCAGATGGATTAGAGATAT+GGG - chr8_1:12607295-12607314 Msa1179280:intron 35.0%
! TATGGGCTGTTATTAAGTCA+TGG - chr8_1:12607312-12607331 Msa1179280:intron 35.0%
! ATGGGCTGTTATTAAGTCAT+GGG - chr8_1:12607313-12607332 Msa1179280:intron 35.0%
! ATTCTGAACTCCAAGCATTT+TGG - chr8_1:12607387-12607406 Msa1179280:intron 35.0%
CAAGTTCTTTCCAAAATGCT+TGG + chr8_1:12607400-12607419 None:intergenic 35.0%
GTGACTTGAAAAATGCAACA+TGG - chr8_1:12607435-12607454 Msa1179280:intron 35.0%
ACTTGAAAAATGCAACATGG+TGG - chr8_1:12607438-12607457 Msa1179280:intron 35.0%
CTTGAAAAATGCAACATGGT+GGG - chr8_1:12607439-12607458 Msa1179280:intron 35.0%
! CTTCATGCAGCTGTTAATTT+TGG - chr8_1:12607527-12607546 Msa1179280:CDS 35.0%
TTAAGAATGTAACCTCCGTA+CGG + chr8_1:12607560-12607579 None:intergenic 35.0%
!! ATCTTCTGCTTTTAGTTGGT+CGG + chr8_1:12607583-12607602 None:intergenic 35.0%
TTAGAAAGCTCATCATACTC+GGG + chr8_1:12607626-12607645 None:intergenic 35.0%
CTTAGAAAGCTCATCATACT+CGG + chr8_1:12607627-12607646 None:intergenic 35.0%
TCTTGACAAGACCTCTATAA+TGG + chr8_1:12607711-12607730 None:intergenic 35.0%
AGAGAATTGAAGGTGATCTT+TGG - chr8_1:12607759-12607778 Msa1179280:five_prime_UTR 35.0%
TTCTGATTCACAACCATTAG+AGG - chr8_1:12607784-12607803 Msa1179280:five_prime_UTR 35.0%
AATCTCTTGAAAGCCTCTAA+TGG + chr8_1:12607800-12607819 None:intergenic 35.0%
TTAGAGGCTTTCAAGAGATT+TGG - chr8_1:12607800-12607819 Msa1179280:five_prime_UTR 35.0%
! CAAGAGATTTGGAACAAAGT+TGG - chr8_1:12607811-12607830 Msa1179280:five_prime_UTR 35.0%
GGAATAATGATGAGACTCTA+AGG - chr8_1:12607861-12607880 Msa1179280:five_prime_UTR 35.0%
AAAGTATACGGCATCTTAAC+CGG + chr8_1:12607899-12607918 None:intergenic 35.0%
TTTGCTTTATCCTTCAAGTG+AGG - chr8_1:12607916-12607935 Msa1179280:five_prime_UTR 35.0%
! TACAAGGGAACCTTTTTAGA+TGG + chr8_1:12607978-12607997 None:intergenic 35.0%
AATAACATGACCATGGATAG+GGG + chr8_1:12608046-12608065 None:intergenic 35.0%
CATGGATAATAACATGACCA+TGG + chr8_1:12608053-12608072 None:intergenic 35.0%
TAGTAGAACTAGACTCTAAC+CGG + chr8_1:12603763-12603782 None:intergenic 35.0%
ACCATCAATGTAACTAAAGG+GGG + chr8_1:12603908-12603927 None:intergenic 35.0%
! TTACATTGATGGTTGACCTT+AGG - chr8_1:12603915-12603934 Msa1179280:CDS 35.0%
! AGTAAGTGTTGCAATTCATG+GGG + chr8_1:12603962-12603981 None:intergenic 35.0%
ATTGATGCATAGGAATGTGT+TGG - chr8_1:12604151-12604170 Msa1179280:CDS 35.0%
ACCTGTGATATTTAAACCAG+CGG + chr8_1:12604192-12604211 None:intergenic 35.0%
! AAATATCACAGGTGGATTCA+AGG - chr8_1:12604199-12604218 Msa1179280:CDS 35.0%
TGTCAAATATAGAGCTAGTG+AGG + chr8_1:12604235-12604254 None:intergenic 35.0%
AGCTCTATATTTGACACCTA+CGG - chr8_1:12604239-12604258 Msa1179280:CDS 35.0%
AGAAAGTGGAAAAGGTAAAG+TGG - chr8_1:12604600-12604619 Msa1179280:intron 35.0%
GAAAGTGGAAAAGGTAAAGT+GGG - chr8_1:12604601-12604620 Msa1179280:intron 35.0%
! TTTTCAATGGGATAGTGACA+TGG - chr8_1:12604699-12604718 Msa1179280:intron 35.0%
TTTCAATGGGATAGTGACAT+GGG - chr8_1:12604700-12604719 Msa1179280:intron 35.0%
CTTGAAGATATTCCTAACCA+TGG - chr8_1:12604787-12604806 Msa1179280:intron 35.0%
!! AAACAAAGTTGATGGTTCCA+TGG + chr8_1:12604807-12604826 None:intergenic 35.0%
TGAGTTGCAAACAAAGTTGA+TGG + chr8_1:12604815-12604834 None:intergenic 35.0%
! TCAACTTTGTTTGCAACTCA+TGG - chr8_1:12604815-12604834 Msa1179280:CDS 35.0%
CTATGATGTCTACAATGATG+TGG - chr8_1:12605095-12605114 Msa1179280:intron 35.0%
CTTCCAAGAGATGAATCATT+TGG - chr8_1:12605530-12605549 Msa1179280:intron 35.0%
TGACCAAATGATTCATCTCT+TGG + chr8_1:12605536-12605555 None:intergenic 35.0%
!! TCATCAAAGGTGTTAAACTC+TGG + chr8_1:12605656-12605675 None:intergenic 35.0%
!! TTTAGGTGGTGGAAACTTAA+GGG + chr8_1:12605786-12605805 None:intergenic 35.0%
ATACCTTGAATGACTTTAGG+TGG + chr8_1:12605800-12605819 None:intergenic 35.0%
TGGATACCTTGAATGACTTT+AGG + chr8_1:12605803-12605822 None:intergenic 35.0%
GAAAAGTGAATCAATCTGGA+TGG - chr8_1:12605898-12605917 Msa1179280:intron 35.0%
TTTACAAGAGAGATGATTGC+TGG - chr8_1:12605936-12605955 Msa1179280:intron 35.0%
!! GTTTTGTTGAAGCTGTTCTT+TGG + chr8_1:12606178-12606197 None:intergenic 35.0%
AGAACAGCTTCAACAAAACA+TGG - chr8_1:12606179-12606198 Msa1179280:CDS 35.0%
GAACAGCTTCAACAAAACAT+GGG - chr8_1:12606180-12606199 Msa1179280:CDS 35.0%
ATTTACTTTCCTGCAAGTGA+TGG - chr8_1:12606541-12606560 Msa1179280:intron 35.0%
! ATGGTGTTGAAGCTTCAATT+TGG - chr8_1:12606560-12606579 Msa1179280:intron 35.0%
! CAACTACATAAGCTTTAGCA+AGG + chr8_1:12606588-12606607 None:intergenic 35.0%
AACAAATAGGCATCTTAGTG+TGG - chr8_1:12606768-12606787 Msa1179280:CDS 35.0%
GGAAGTAGAAGCTTATGAAT+AGG + chr8_1:12606799-12606818 None:intergenic 35.0%
TGAACATTAATGCACTTGCA+AGG - chr8_1:12606836-12606855 Msa1179280:intron 35.0%
TATTGAGAAGACGTTCTTGA+TGG - chr8_1:12606885-12606904 Msa1179280:intron 35.0%
ATTGAGAAGACGTTCTTGAT+GGG - chr8_1:12606886-12606905 Msa1179280:intron 35.0%
TGCCTAATGATCTACTCAAA+AGG - chr8_1:12606971-12606990 Msa1179280:CDS 35.0%
GAATATCCCATCTTAGATTG+AGG + chr8_1:12607068-12607087 None:intergenic 35.0%
! CAATCTAAGATGGGATATTC+AGG - chr8_1:12607068-12607087 Msa1179280:CDS 35.0%
TGTCTAAACATCAATGGTTG+TGG - chr8_1:12607098-12607117 Msa1179280:CDS 35.0%
! CTTCCTTTCTTGTTATCTAG+AGG - chr8_1:12607206-12607225 Msa1179280:intron 35.0%
ACACCTCTAGATAACAAGAA+AGG + chr8_1:12607212-12607231 None:intergenic 35.0%
! TTTCTTGTTATCTAGAGGTG+TGG - chr8_1:12607211-12607230 Msa1179280:intron 35.0%
!! TGCAGATGGATTAGAGATAT+GGG - chr8_1:12607295-12607314 Msa1179280:intron 35.0%
! TATGGGCTGTTATTAAGTCA+TGG - chr8_1:12607312-12607331 Msa1179280:intron 35.0%
! ATGGGCTGTTATTAAGTCAT+GGG - chr8_1:12607313-12607332 Msa1179280:intron 35.0%
! ATTCTGAACTCCAAGCATTT+TGG - chr8_1:12607387-12607406 Msa1179280:intron 35.0%
CAAGTTCTTTCCAAAATGCT+TGG + chr8_1:12607400-12607419 None:intergenic 35.0%
GTGACTTGAAAAATGCAACA+TGG - chr8_1:12607435-12607454 Msa1179280:intron 35.0%
ACTTGAAAAATGCAACATGG+TGG - chr8_1:12607438-12607457 Msa1179280:intron 35.0%
CTTGAAAAATGCAACATGGT+GGG - chr8_1:12607439-12607458 Msa1179280:intron 35.0%
! CTTCATGCAGCTGTTAATTT+TGG - chr8_1:12607527-12607546 Msa1179280:CDS 35.0%
TTAAGAATGTAACCTCCGTA+CGG + chr8_1:12607560-12607579 None:intergenic 35.0%
!! ATCTTCTGCTTTTAGTTGGT+CGG + chr8_1:12607583-12607602 None:intergenic 35.0%
TTAGAAAGCTCATCATACTC+GGG + chr8_1:12607626-12607645 None:intergenic 35.0%
CTTAGAAAGCTCATCATACT+CGG + chr8_1:12607627-12607646 None:intergenic 35.0%
TCTTGACAAGACCTCTATAA+TGG + chr8_1:12607711-12607730 None:intergenic 35.0%
AGAGAATTGAAGGTGATCTT+TGG - chr8_1:12607759-12607778 Msa1179280:five_prime_UTR 35.0%
TTCTGATTCACAACCATTAG+AGG - chr8_1:12607784-12607803 Msa1179280:five_prime_UTR 35.0%
AATCTCTTGAAAGCCTCTAA+TGG + chr8_1:12607800-12607819 None:intergenic 35.0%
TTAGAGGCTTTCAAGAGATT+TGG - chr8_1:12607800-12607819 Msa1179280:five_prime_UTR 35.0%
! CAAGAGATTTGGAACAAAGT+TGG - chr8_1:12607811-12607830 Msa1179280:five_prime_UTR 35.0%
GGAATAATGATGAGACTCTA+AGG - chr8_1:12607861-12607880 Msa1179280:five_prime_UTR 35.0%
AAAGTATACGGCATCTTAAC+CGG + chr8_1:12607899-12607918 None:intergenic 35.0%
TTTGCTTTATCCTTCAAGTG+AGG - chr8_1:12607916-12607935 Msa1179280:five_prime_UTR 35.0%
! TACAAGGGAACCTTTTTAGA+TGG + chr8_1:12607978-12607997 None:intergenic 35.0%
AATAACATGACCATGGATAG+GGG + chr8_1:12608046-12608065 None:intergenic 35.0%
CATGGATAATAACATGACCA+TGG + chr8_1:12608053-12608072 None:intergenic 35.0%
CATCAATGTAACTAAAGGGG+GGG + chr8_1:12603906-12603925 None:intergenic 40.0%
CCATCAATGTAACTAAAGGG+GGG + chr8_1:12603907-12603926 None:intergenic 40.0%
GCAAATGAAAGAAAACCCAG+TGG + chr8_1:12604034-12604053 None:intergenic 40.0%
! TTTTGCACTTTCTGCCTTTC+TGG + chr8_1:12604056-12604075 None:intergenic 40.0%
TCCATTTCACAGAAGCCAAA+AGG - chr8_1:12604112-12604131 Msa1179280:CDS 40.0%
!!! ACCTTTTGGCTTCTGTGAAA+TGG + chr8_1:12604116-12604135 None:intergenic 40.0%
GGACAGTGATATTGATGCAT+AGG - chr8_1:12604141-12604160 Msa1179280:CDS 40.0%
TGATATTTAAACCAGCGGTG+AGG + chr8_1:12604187-12604206 None:intergenic 40.0%
!! ACCGCTGGTTTAAATATCAC+AGG - chr8_1:12604188-12604207 Msa1179280:CDS 40.0%
! GCTGGTTTAAATATCACAGG+TGG - chr8_1:12604191-12604210 Msa1179280:CDS 40.0%
CAAACATAATGCTCACCACA+TGG - chr8_1:12604374-12604393 Msa1179280:CDS 40.0%
GGAAAGAGATCGTTTCTTGA+AGG - chr8_1:12604622-12604641 Msa1179280:intron 40.0%
!! AAGTTGATGGTTCCATGGTT+AGG + chr8_1:12604802-12604821 None:intergenic 40.0%
! ACGCATTTTCTTTGCCAACA+AGG - chr8_1:12604867-12604886 Msa1179280:CDS 40.0%
CTATAGTAGACTAATGGAGC+TGG + chr8_1:12605006-12605025 None:intergenic 40.0%
GAAGAACTGAAGACTTTACG+AGG - chr8_1:12605030-12605049 Msa1179280:CDS 40.0%
TGAAGACTTTACGAGGAGAT+GGG - chr8_1:12605037-12605056 Msa1179280:CDS 40.0%
GACAGGTAAACGTGAAGAAT+GGG - chr8_1:12605059-12605078 Msa1179280:intron 40.0%
GTAAACGTGAAGAATGGGAA+AGG - chr8_1:12605064-12605083 Msa1179280:intron 40.0%
!!! GCTAAGCTAGCTTTTCTATC+AGG + chr8_1:12605126-12605145 None:intergenic 40.0%
CTGCACAAAGGAAAGTGATA+TGG - chr8_1:12605284-12605303 Msa1179280:CDS 40.0%
CAGATCCTAAAAGTGAGAGA+CGG - chr8_1:12605492-12605511 Msa1179280:intron 40.0%
GTAAGTGCAGATGTTAATGC+AGG + chr8_1:12605617-12605636 None:intergenic 40.0%
AAATGCACGCACATCATCAA+AGG + chr8_1:12605669-12605688 None:intergenic 40.0%
GTTCCTTGAACAACGGTATA+GGG + chr8_1:12605739-12605758 None:intergenic 40.0%
AGTTCCTTGAACAACGGTAT+AGG + chr8_1:12605740-12605759 None:intergenic 40.0%
!! TTAGGTGGTGGAAACTTAAG+GGG + chr8_1:12605785-12605804 None:intergenic 40.0%
!! CTTTAGGTGGTGGAAACTTA+AGG + chr8_1:12605787-12605806 None:intergenic 40.0%
AAGCTAGATAGGCAACTCTA+CGG - chr8_1:12606132-12606151 Msa1179280:CDS 40.0%
CTGTTCTTTGGTTATTGTGC+TGG + chr8_1:12606166-12606185 None:intergenic 40.0%
AGCTTCAACAAAACATGGGT+GGG - chr8_1:12606184-12606203 Msa1179280:CDS 40.0%
AAATGCAGCTGACCATACAA+AGG - chr8_1:12606405-12606424 Msa1179280:intron 40.0%
TCGTAGCATATGCCTTTGTA+TGG + chr8_1:12606420-12606439 None:intergenic 40.0%
!! TGATGGAACTTTGAAGCCAT+TGG - chr8_1:12606462-12606481 Msa1179280:intron 40.0%
TATACCAATGGCTGATGAGT+TGG + chr8_1:12606630-12606649 None:intergenic 40.0%
TTCATTGTGTCACGATAGTG+CGG + chr8_1:12606820-12606839 None:intergenic 40.0%
AGTGTCTTGGTAAATGCAGA+GGG - chr8_1:12606859-12606878 Msa1179280:intron 40.0%
TTCGCAACCTCAATCTAAGA+TGG - chr8_1:12607058-12607077 Msa1179280:CDS 40.0%
! TCGCAACCTCAATCTAAGAT+GGG - chr8_1:12607059-12607078 Msa1179280:CDS 40.0%
CTAATCCATCTGCAGCATAA+GGG + chr8_1:12607289-12607308 None:intergenic 40.0%
TCTAATCCATCTGCAGCATA+AGG + chr8_1:12607290-12607309 None:intergenic 40.0%
!! CTGCAGATGGATTAGAGATA+TGG - chr8_1:12607294-12607313 Msa1179280:intron 40.0%
TGGAAAGAACTTGTAGAGGT+TGG - chr8_1:12607407-12607426 Msa1179280:intron 40.0%
TGCTGAAGCAATCCATATGA+GGG + chr8_1:12607507-12607526 None:intergenic 40.0%
TAGAAAGCTCATCATACTCG+GGG + chr8_1:12607625-12607644 None:intergenic 40.0%
GCTTCTGATGAACAATACCT+CGG - chr8_1:12607734-12607753 Msa1179280:five_prime_UTR 40.0%
! GAGACTCTAAGGAATCGATA+TGG - chr8_1:12607872-12607891 Msa1179280:five_prime_UTR 40.0%
TCTAAGGAATCGATATGGAC+CGG - chr8_1:12607877-12607896 Msa1179280:five_prime_UTR 40.0%
CTTTATCCTTCAAGTGAGGA+AGG - chr8_1:12607920-12607939 Msa1179280:five_prime_UTR 40.0%
CATCAATGTAACTAAAGGGG+GGG + chr8_1:12603906-12603925 None:intergenic 40.0%
CCATCAATGTAACTAAAGGG+GGG + chr8_1:12603907-12603926 None:intergenic 40.0%
GCAAATGAAAGAAAACCCAG+TGG + chr8_1:12604034-12604053 None:intergenic 40.0%
! TTTTGCACTTTCTGCCTTTC+TGG + chr8_1:12604056-12604075 None:intergenic 40.0%
TCCATTTCACAGAAGCCAAA+AGG - chr8_1:12604112-12604131 Msa1179280:CDS 40.0%
!!! ACCTTTTGGCTTCTGTGAAA+TGG + chr8_1:12604116-12604135 None:intergenic 40.0%
GGACAGTGATATTGATGCAT+AGG - chr8_1:12604141-12604160 Msa1179280:CDS 40.0%
TGATATTTAAACCAGCGGTG+AGG + chr8_1:12604187-12604206 None:intergenic 40.0%
!! ACCGCTGGTTTAAATATCAC+AGG - chr8_1:12604188-12604207 Msa1179280:CDS 40.0%
! GCTGGTTTAAATATCACAGG+TGG - chr8_1:12604191-12604210 Msa1179280:CDS 40.0%
CAAACATAATGCTCACCACA+TGG - chr8_1:12604374-12604393 Msa1179280:CDS 40.0%
GGAAAGAGATCGTTTCTTGA+AGG - chr8_1:12604622-12604641 Msa1179280:intron 40.0%
!! AAGTTGATGGTTCCATGGTT+AGG + chr8_1:12604802-12604821 None:intergenic 40.0%
! ACGCATTTTCTTTGCCAACA+AGG - chr8_1:12604867-12604886 Msa1179280:CDS 40.0%
CTATAGTAGACTAATGGAGC+TGG + chr8_1:12605006-12605025 None:intergenic 40.0%
GAAGAACTGAAGACTTTACG+AGG - chr8_1:12605030-12605049 Msa1179280:CDS 40.0%
TGAAGACTTTACGAGGAGAT+GGG - chr8_1:12605037-12605056 Msa1179280:CDS 40.0%
GACAGGTAAACGTGAAGAAT+GGG - chr8_1:12605059-12605078 Msa1179280:intron 40.0%
GTAAACGTGAAGAATGGGAA+AGG - chr8_1:12605064-12605083 Msa1179280:intron 40.0%
!!! GCTAAGCTAGCTTTTCTATC+AGG + chr8_1:12605126-12605145 None:intergenic 40.0%
CTGCACAAAGGAAAGTGATA+TGG - chr8_1:12605284-12605303 Msa1179280:CDS 40.0%
CAGATCCTAAAAGTGAGAGA+CGG - chr8_1:12605492-12605511 Msa1179280:intron 40.0%
GTAAGTGCAGATGTTAATGC+AGG + chr8_1:12605617-12605636 None:intergenic 40.0%
AAATGCACGCACATCATCAA+AGG + chr8_1:12605669-12605688 None:intergenic 40.0%
GTTCCTTGAACAACGGTATA+GGG + chr8_1:12605739-12605758 None:intergenic 40.0%
AGTTCCTTGAACAACGGTAT+AGG + chr8_1:12605740-12605759 None:intergenic 40.0%
!! TTAGGTGGTGGAAACTTAAG+GGG + chr8_1:12605785-12605804 None:intergenic 40.0%
!! CTTTAGGTGGTGGAAACTTA+AGG + chr8_1:12605787-12605806 None:intergenic 40.0%
AAGCTAGATAGGCAACTCTA+CGG - chr8_1:12606132-12606151 Msa1179280:CDS 40.0%
CTGTTCTTTGGTTATTGTGC+TGG + chr8_1:12606166-12606185 None:intergenic 40.0%
AGCTTCAACAAAACATGGGT+GGG - chr8_1:12606184-12606203 Msa1179280:CDS 40.0%
AAATGCAGCTGACCATACAA+AGG - chr8_1:12606405-12606424 Msa1179280:intron 40.0%
TCGTAGCATATGCCTTTGTA+TGG + chr8_1:12606420-12606439 None:intergenic 40.0%
!! TGATGGAACTTTGAAGCCAT+TGG - chr8_1:12606462-12606481 Msa1179280:intron 40.0%
TATACCAATGGCTGATGAGT+TGG + chr8_1:12606630-12606649 None:intergenic 40.0%
TTCATTGTGTCACGATAGTG+CGG + chr8_1:12606820-12606839 None:intergenic 40.0%
AGTGTCTTGGTAAATGCAGA+GGG - chr8_1:12606859-12606878 Msa1179280:intron 40.0%
TTCGCAACCTCAATCTAAGA+TGG - chr8_1:12607058-12607077 Msa1179280:CDS 40.0%
! TCGCAACCTCAATCTAAGAT+GGG - chr8_1:12607059-12607078 Msa1179280:CDS 40.0%
CTAATCCATCTGCAGCATAA+GGG + chr8_1:12607289-12607308 None:intergenic 40.0%
TCTAATCCATCTGCAGCATA+AGG + chr8_1:12607290-12607309 None:intergenic 40.0%
!! CTGCAGATGGATTAGAGATA+TGG - chr8_1:12607294-12607313 Msa1179280:intron 40.0%
TGGAAAGAACTTGTAGAGGT+TGG - chr8_1:12607407-12607426 Msa1179280:intron 40.0%
TGCTGAAGCAATCCATATGA+GGG + chr8_1:12607507-12607526 None:intergenic 40.0%
TAGAAAGCTCATCATACTCG+GGG + chr8_1:12607625-12607644 None:intergenic 40.0%
GCTTCTGATGAACAATACCT+CGG - chr8_1:12607734-12607753 Msa1179280:five_prime_UTR 40.0%
! GAGACTCTAAGGAATCGATA+TGG - chr8_1:12607872-12607891 Msa1179280:five_prime_UTR 40.0%
TCTAAGGAATCGATATGGAC+CGG - chr8_1:12607877-12607896 Msa1179280:five_prime_UTR 40.0%
CTTTATCCTTCAAGTGAGGA+AGG - chr8_1:12607920-12607939 Msa1179280:five_prime_UTR 40.0%
ATGTTTCGGTTCAACGGAAG+AGG + chr8_1:12603815-12603834 None:intergenic 45.0%
GGAGCCCTAAAGTAAGAGTT+TGG + chr8_1:12603850-12603869 None:intergenic 45.0%
CCCCCCTTTAGTTACATTGA+TGG - chr8_1:12603904-12603923 Msa1179280:CDS 45.0%
AATAGCAACTTGCAAGCCAC+TGG - chr8_1:12604015-12604034 Msa1179280:CDS 45.0%
ATAGCAACTTGCAAGCCACT+GGG - chr8_1:12604016-12604035 Msa1179280:CDS 45.0%
TCACAGAAGCCAAAAGGTGA+AGG - chr8_1:12604118-12604137 Msa1179280:CDS 45.0%
CACAGAAGCCAAAAGGTGAA+GGG - chr8_1:12604119-12604138 Msa1179280:CDS 45.0%
ACAGAAGCCAAAAGGTGAAG+GGG - chr8_1:12604120-12604139 Msa1179280:CDS 45.0%
! ACAGGTGGATTCAAGGTTCT+TGG - chr8_1:12604206-12604225 Msa1179280:CDS 45.0%
TGACACCTACGGTTCAATCT+TGG - chr8_1:12604250-12604269 Msa1179280:CDS 45.0%
GACACCTACGGTTCAATCTT+GGG - chr8_1:12604251-12604270 Msa1179280:CDS 45.0%
! ATTAGTGCTACTAGCGCTGA+TGG - chr8_1:12604296-12604315 Msa1179280:CDS 45.0%
GATAGTGACATGGGAATTCC+AGG - chr8_1:12604709-12604728 Msa1179280:intron 45.0%
AATGGAGCTGGTGTTTCACT+TGG + chr8_1:12604994-12605013 None:intergenic 45.0%
CTGAAGACTTTACGAGGAGA+TGG - chr8_1:12605036-12605055 Msa1179280:CDS 45.0%
GGACAGGTAAACGTGAAGAA+TGG - chr8_1:12605058-12605077 Msa1179280:intron 45.0%
GTGTTGGATCCTCCAATAAC+GGG + chr8_1:12605153-12605172 None:intergenic 45.0%
! GGTGTTGGATCCTCCAATAA+CGG + chr8_1:12605154-12605173 None:intergenic 45.0%
! TTTCTTAGCTGGTTTCCTGC+CGG + chr8_1:12605202-12605221 None:intergenic 45.0%
! TGATGTGCGTGCATTTTACG+AGG - chr8_1:12605673-12605692 Msa1179280:intron 45.0%
! GATGTGCGTGCATTTTACGA+GGG - chr8_1:12605674-12605693 Msa1179280:intron 45.0%
TAGCCCTATACCGTTGTTCA+AGG - chr8_1:12605733-12605752 Msa1179280:intron 45.0%
CTGAGGAGTTCCTTGAACAA+CGG + chr8_1:12605746-12605765 None:intergenic 45.0%
AAGGAACTCCTCAGAACTGA+TGG - chr8_1:12605752-12605771 Msa1179280:intron 45.0%
CCTTGAATGACTTTAGGTGG+TGG + chr8_1:12605797-12605816 None:intergenic 45.0%
CCACCACCTAAAGTCATTCA+AGG - chr8_1:12605794-12605813 Msa1179280:intron 45.0%
!! CTATCTAGCTTGCTCTTTGG+TGG + chr8_1:12606123-12606142 None:intergenic 45.0%
CACCAAAGAGCAAGCTAGAT+AGG - chr8_1:12606121-12606140 Msa1179280:CDS 45.0%
!! TGCCTATCTAGCTTGCTCTT+TGG + chr8_1:12606126-12606145 None:intergenic 45.0%
CAGCTTCAACAAAACATGGG+TGG - chr8_1:12606183-12606202 Msa1179280:CDS 45.0%
!! AATGGCTGATGAGTTGGTGA+TGG + chr8_1:12606624-12606643 None:intergenic 45.0%
ATCACCAACTCATCAGCCAT+TGG - chr8_1:12606623-12606642 Msa1179280:CDS 45.0%
GAGTGTCTTGGTAAATGCAG+AGG - chr8_1:12606858-12606877 Msa1179280:intron 45.0%
! GATTGGGTTTTCACTGAGCA+AGG - chr8_1:12606946-12606965 Msa1179280:CDS 45.0%
! ATCTAGAGGTGTGGCTCTTA+AGG - chr8_1:12607220-12607239 Msa1179280:intron 45.0%
AAGGGTAGTCCTCTATCAGA+AGG + chr8_1:12607271-12607290 None:intergenic 45.0%
! GAACTTGTAGAGGTTGGTCA+CGG - chr8_1:12607413-12607432 Msa1179280:intron 45.0%
TGAAGCAATCCATATGAGGG+TGG + chr8_1:12607504-12607523 None:intergenic 45.0%
GTGCTGAAGCAATCCATATG+AGG + chr8_1:12607508-12607527 None:intergenic 45.0%
TTTGGACAATATCCGTACGG+AGG - chr8_1:12607545-12607564 Msa1179280:CDS 45.0%
AGAAAGCTCATCATACTCGG+GGG + chr8_1:12607624-12607643 None:intergenic 45.0%
TACCTCGGACAGAGAATTGA+AGG - chr8_1:12607749-12607768 Msa1179280:five_prime_UTR 45.0%
GTCAATCCTTCCTCACTTGA+AGG + chr8_1:12607929-12607948 None:intergenic 45.0%
ATGTTTCGGTTCAACGGAAG+AGG + chr8_1:12603815-12603834 None:intergenic 45.0%
GGAGCCCTAAAGTAAGAGTT+TGG + chr8_1:12603850-12603869 None:intergenic 45.0%
CCCCCCTTTAGTTACATTGA+TGG - chr8_1:12603904-12603923 Msa1179280:CDS 45.0%
AATAGCAACTTGCAAGCCAC+TGG - chr8_1:12604015-12604034 Msa1179280:CDS 45.0%
ATAGCAACTTGCAAGCCACT+GGG - chr8_1:12604016-12604035 Msa1179280:CDS 45.0%
TCACAGAAGCCAAAAGGTGA+AGG - chr8_1:12604118-12604137 Msa1179280:CDS 45.0%
CACAGAAGCCAAAAGGTGAA+GGG - chr8_1:12604119-12604138 Msa1179280:CDS 45.0%
ACAGAAGCCAAAAGGTGAAG+GGG - chr8_1:12604120-12604139 Msa1179280:CDS 45.0%
! ACAGGTGGATTCAAGGTTCT+TGG - chr8_1:12604206-12604225 Msa1179280:CDS 45.0%
TGACACCTACGGTTCAATCT+TGG - chr8_1:12604250-12604269 Msa1179280:CDS 45.0%
GACACCTACGGTTCAATCTT+GGG - chr8_1:12604251-12604270 Msa1179280:CDS 45.0%
! ATTAGTGCTACTAGCGCTGA+TGG - chr8_1:12604296-12604315 Msa1179280:CDS 45.0%
GATAGTGACATGGGAATTCC+AGG - chr8_1:12604709-12604728 Msa1179280:intron 45.0%
AATGGAGCTGGTGTTTCACT+TGG + chr8_1:12604994-12605013 None:intergenic 45.0%
CTGAAGACTTTACGAGGAGA+TGG - chr8_1:12605036-12605055 Msa1179280:CDS 45.0%
GGACAGGTAAACGTGAAGAA+TGG - chr8_1:12605058-12605077 Msa1179280:intron 45.0%
GTGTTGGATCCTCCAATAAC+GGG + chr8_1:12605153-12605172 None:intergenic 45.0%
! GGTGTTGGATCCTCCAATAA+CGG + chr8_1:12605154-12605173 None:intergenic 45.0%
! TTTCTTAGCTGGTTTCCTGC+CGG + chr8_1:12605202-12605221 None:intergenic 45.0%
! TGATGTGCGTGCATTTTACG+AGG - chr8_1:12605673-12605692 Msa1179280:intron 45.0%
! GATGTGCGTGCATTTTACGA+GGG - chr8_1:12605674-12605693 Msa1179280:intron 45.0%
TAGCCCTATACCGTTGTTCA+AGG - chr8_1:12605733-12605752 Msa1179280:intron 45.0%
CTGAGGAGTTCCTTGAACAA+CGG + chr8_1:12605746-12605765 None:intergenic 45.0%
AAGGAACTCCTCAGAACTGA+TGG - chr8_1:12605752-12605771 Msa1179280:intron 45.0%
CCTTGAATGACTTTAGGTGG+TGG + chr8_1:12605797-12605816 None:intergenic 45.0%
CCACCACCTAAAGTCATTCA+AGG - chr8_1:12605794-12605813 Msa1179280:intron 45.0%
!! CTATCTAGCTTGCTCTTTGG+TGG + chr8_1:12606123-12606142 None:intergenic 45.0%
CACCAAAGAGCAAGCTAGAT+AGG - chr8_1:12606121-12606140 Msa1179280:CDS 45.0%
!! TGCCTATCTAGCTTGCTCTT+TGG + chr8_1:12606126-12606145 None:intergenic 45.0%
CAGCTTCAACAAAACATGGG+TGG - chr8_1:12606183-12606202 Msa1179280:CDS 45.0%
!! AATGGCTGATGAGTTGGTGA+TGG + chr8_1:12606624-12606643 None:intergenic 45.0%
ATCACCAACTCATCAGCCAT+TGG - chr8_1:12606623-12606642 Msa1179280:CDS 45.0%
GAGTGTCTTGGTAAATGCAG+AGG - chr8_1:12606858-12606877 Msa1179280:intron 45.0%
! GATTGGGTTTTCACTGAGCA+AGG - chr8_1:12606946-12606965 Msa1179280:CDS 45.0%
! ATCTAGAGGTGTGGCTCTTA+AGG - chr8_1:12607220-12607239 Msa1179280:intron 45.0%
AAGGGTAGTCCTCTATCAGA+AGG + chr8_1:12607271-12607290 None:intergenic 45.0%
! GAACTTGTAGAGGTTGGTCA+CGG - chr8_1:12607413-12607432 Msa1179280:intron 45.0%
TGAAGCAATCCATATGAGGG+TGG + chr8_1:12607504-12607523 None:intergenic 45.0%
GTGCTGAAGCAATCCATATG+AGG + chr8_1:12607508-12607527 None:intergenic 45.0%
TTTGGACAATATCCGTACGG+AGG - chr8_1:12607545-12607564 Msa1179280:CDS 45.0%
AGAAAGCTCATCATACTCGG+GGG + chr8_1:12607624-12607643 None:intergenic 45.0%
TACCTCGGACAGAGAATTGA+AGG - chr8_1:12607749-12607768 Msa1179280:five_prime_UTR 45.0%
GTCAATCCTTCCTCACTTGA+AGG + chr8_1:12607929-12607948 None:intergenic 45.0%
!! TTAAAAAAATGTAAAAATAT+TGG + chr8_1:12603871-12603890 None:intergenic 5.0%
!! TTAAAAAAATGTAAAAATAT+TGG + chr8_1:12603871-12603890 None:intergenic 5.0%
AAAAAACCCGTGCATCGCAC+CGG - chr8_1:12603741-12603760 Msa1179280:three_prime_UTR 50.0%
CAATGTAACTAAAGGGGGGG+TGG + chr8_1:12603903-12603922 None:intergenic 50.0%
ACCTTAGGCTGTTGACGTCT+TGG - chr8_1:12603930-12603949 Msa1179280:CDS 50.0%
TCCAAGACGTCAACAGCCTA+AGG + chr8_1:12603934-12603953 None:intergenic 50.0%
! TCACTGTCCCCTTCACCTTT+TGG + chr8_1:12604130-12604149 None:intergenic 50.0%
TTCAATCTTGGGCCGTTCAG+TGG - chr8_1:12604262-12604281 Msa1179280:CDS 50.0%
TCAACCTGAGAGCCACTGAA+CGG + chr8_1:12604277-12604296 None:intergenic 50.0%
CACTGTCCAGCTCCTAGAAT+CGG + chr8_1:12604664-12604683 None:intergenic 50.0%
ACTTTACGAGGAGATGGGAC+AGG - chr8_1:12605042-12605061 Msa1179280:CDS 50.0%
AGCTTAGCTCGTCCCGTTAT+TGG - chr8_1:12605138-12605157 Msa1179280:intron 50.0%
TTAGCTCGTCCCGTTATTGG+AGG - chr8_1:12605141-12605160 Msa1179280:intron 50.0%
GGCAGGAAACCAGCTAAGAA+AGG - chr8_1:12605201-12605220 Msa1179280:CDS 50.0%
!! TCGCTCCGTCTCTCACTTTT+AGG + chr8_1:12605500-12605519 None:intergenic 50.0%
GTGCTTCACCATCAGTTCTG+AGG + chr8_1:12605763-12605782 None:intergenic 50.0%
CTGCTTAGCTCAATGGCCAA+TGG + chr8_1:12606481-12606500 None:intergenic 50.0%
! ATGTGGGCTGCTTAGCTCAA+TGG + chr8_1:12606488-12606507 None:intergenic 50.0%
AGCTATCAGCCTGAGGATGT+GGG + chr8_1:12606504-12606523 None:intergenic 50.0%
AAGCTATCAGCCTGAGGATG+TGG + chr8_1:12606505-12606524 None:intergenic 50.0%
CATCCTCAGGCTGATAGCTT+TGG - chr8_1:12606505-12606524 Msa1179280:intron 50.0%
GCTTCAACACCATCACTTGC+AGG + chr8_1:12606553-12606572 None:intergenic 50.0%
!! TGCACTTGCAAGGAGTGTCT+TGG - chr8_1:12606846-12606865 Msa1179280:intron 50.0%
AAGGATCCTACTTCCCCACA+CGG - chr8_1:12607239-12607258 Msa1179280:intron 50.0%
AGTCCTCTATCAGAAGGCGA+AGG + chr8_1:12607265-12607284 None:intergenic 50.0%
GACTACCCTTATGCTGCAGA+TGG - chr8_1:12607281-12607300 Msa1179280:intron 50.0%
ACACTTGCACCACCCTCATA+TGG - chr8_1:12607492-12607511 Msa1179280:CDS 50.0%
TACTCGGGGGATCCTTTCTT+AGG + chr8_1:12607611-12607630 None:intergenic 50.0%
CACCTTCAATTCTCTGTCCG+AGG + chr8_1:12607754-12607773 None:intergenic 50.0%
!! GAGGAAGGATTGACTTGCAG+AGG - chr8_1:12607935-12607954 Msa1179280:five_prime_UTR 50.0%
ATTCCCTCAACCCCTATCCA+TGG - chr8_1:12608033-12608052 Msa1179280:five_prime_UTR 50.0%
TGACCATGGATAGGGGTTGA+GGG + chr8_1:12608039-12608058 None:intergenic 50.0%
ATGACCATGGATAGGGGTTG+AGG + chr8_1:12608040-12608059 None:intergenic 50.0%
AAAAAACCCGTGCATCGCAC+CGG - chr8_1:12603741-12603760 Msa1179280:three_prime_UTR 50.0%
CAATGTAACTAAAGGGGGGG+TGG + chr8_1:12603903-12603922 None:intergenic 50.0%
ACCTTAGGCTGTTGACGTCT+TGG - chr8_1:12603930-12603949 Msa1179280:CDS 50.0%
TCCAAGACGTCAACAGCCTA+AGG + chr8_1:12603934-12603953 None:intergenic 50.0%
! TCACTGTCCCCTTCACCTTT+TGG + chr8_1:12604130-12604149 None:intergenic 50.0%
TTCAATCTTGGGCCGTTCAG+TGG - chr8_1:12604262-12604281 Msa1179280:CDS 50.0%
TCAACCTGAGAGCCACTGAA+CGG + chr8_1:12604277-12604296 None:intergenic 50.0%
CACTGTCCAGCTCCTAGAAT+CGG + chr8_1:12604664-12604683 None:intergenic 50.0%
ACTTTACGAGGAGATGGGAC+AGG - chr8_1:12605042-12605061 Msa1179280:CDS 50.0%
AGCTTAGCTCGTCCCGTTAT+TGG - chr8_1:12605138-12605157 Msa1179280:intron 50.0%
TTAGCTCGTCCCGTTATTGG+AGG - chr8_1:12605141-12605160 Msa1179280:intron 50.0%
GGCAGGAAACCAGCTAAGAA+AGG - chr8_1:12605201-12605220 Msa1179280:CDS 50.0%
!! TCGCTCCGTCTCTCACTTTT+AGG + chr8_1:12605500-12605519 None:intergenic 50.0%
GTGCTTCACCATCAGTTCTG+AGG + chr8_1:12605763-12605782 None:intergenic 50.0%
CTGCTTAGCTCAATGGCCAA+TGG + chr8_1:12606481-12606500 None:intergenic 50.0%
! ATGTGGGCTGCTTAGCTCAA+TGG + chr8_1:12606488-12606507 None:intergenic 50.0%
AGCTATCAGCCTGAGGATGT+GGG + chr8_1:12606504-12606523 None:intergenic 50.0%
AAGCTATCAGCCTGAGGATG+TGG + chr8_1:12606505-12606524 None:intergenic 50.0%
CATCCTCAGGCTGATAGCTT+TGG - chr8_1:12606505-12606524 Msa1179280:intron 50.0%
GCTTCAACACCATCACTTGC+AGG + chr8_1:12606553-12606572 None:intergenic 50.0%
!! TGCACTTGCAAGGAGTGTCT+TGG - chr8_1:12606846-12606865 Msa1179280:intron 50.0%
AAGGATCCTACTTCCCCACA+CGG - chr8_1:12607239-12607258 Msa1179280:intron 50.0%
AGTCCTCTATCAGAAGGCGA+AGG + chr8_1:12607265-12607284 None:intergenic 50.0%
GACTACCCTTATGCTGCAGA+TGG - chr8_1:12607281-12607300 Msa1179280:intron 50.0%
ACACTTGCACCACCCTCATA+TGG - chr8_1:12607492-12607511 Msa1179280:CDS 50.0%
TACTCGGGGGATCCTTTCTT+AGG + chr8_1:12607611-12607630 None:intergenic 50.0%
CACCTTCAATTCTCTGTCCG+AGG + chr8_1:12607754-12607773 None:intergenic 50.0%
!! GAGGAAGGATTGACTTGCAG+AGG - chr8_1:12607935-12607954 Msa1179280:five_prime_UTR 50.0%
ATTCCCTCAACCCCTATCCA+TGG - chr8_1:12608033-12608052 Msa1179280:five_prime_UTR 50.0%
TGACCATGGATAGGGGTTGA+GGG + chr8_1:12608039-12608058 None:intergenic 50.0%
ATGACCATGGATAGGGGTTG+AGG + chr8_1:12608040-12608059 None:intergenic 50.0%
ACTCTAACCGGTGCGATGCA+CGG + chr8_1:12603751-12603770 None:intergenic 55.0%
GATATCAACGTCCTCACCGC+TGG - chr8_1:12604173-12604192 Msa1179280:CDS 55.0%
ACGGCCCAAGATTGAACCGT+AGG + chr8_1:12604258-12604277 None:intergenic 55.0%
!! GTTACCTCCGCACCGATTCT+AGG - chr8_1:12604649-12604668 Msa1179280:intron 55.0%
TCCAGCTCCTAGAATCGGTG+CGG + chr8_1:12604659-12604678 None:intergenic 55.0%
TCGAGGGTAAGGCAAGGTGT+TGG + chr8_1:12605169-12605188 None:intergenic 55.0%
ACACCTTGCCTTACCCTCGA+AGG - chr8_1:12605169-12605188 Msa1179280:CDS 55.0%
CACCTTGCCTTACCCTCGAA+GGG - chr8_1:12605170-12605189 Msa1179280:CDS 55.0%
ACCTTGCCTTACCCTCGAAG+GGG - chr8_1:12605171-12605190 Msa1179280:CDS 55.0%
! GTGCGTGCATTTTACGAGGG+TGG - chr8_1:12605677-12605696 Msa1179280:intron 55.0%
GGACCAAAGCTATCAGCCTG+AGG + chr8_1:12606511-12606530 None:intergenic 55.0%
ACTCTAACCGGTGCGATGCA+CGG + chr8_1:12603751-12603770 None:intergenic 55.0%
GATATCAACGTCCTCACCGC+TGG - chr8_1:12604173-12604192 Msa1179280:CDS 55.0%
ACGGCCCAAGATTGAACCGT+AGG + chr8_1:12604258-12604277 None:intergenic 55.0%
!! GTTACCTCCGCACCGATTCT+AGG - chr8_1:12604649-12604668 Msa1179280:intron 55.0%
TCCAGCTCCTAGAATCGGTG+CGG + chr8_1:12604659-12604678 None:intergenic 55.0%
TCGAGGGTAAGGCAAGGTGT+TGG + chr8_1:12605169-12605188 None:intergenic 55.0%
ACACCTTGCCTTACCCTCGA+AGG - chr8_1:12605169-12605188 Msa1179280:CDS 55.0%
CACCTTGCCTTACCCTCGAA+GGG - chr8_1:12605170-12605189 Msa1179280:CDS 55.0%
ACCTTGCCTTACCCTCGAAG+GGG - chr8_1:12605171-12605190 Msa1179280:CDS 55.0%
! GTGCGTGCATTTTACGAGGG+TGG - chr8_1:12605677-12605696 Msa1179280:intron 55.0%
GGACCAAAGCTATCAGCCTG+AGG + chr8_1:12606511-12606530 None:intergenic 55.0%
CTCTAACCGGTGCGATGCAC+GGG + chr8_1:12603750-12603769 None:intergenic 60.0%
AGCTCCTAGAATCGGTGCGG+AGG + chr8_1:12604656-12604675 None:intergenic 60.0%
!! TCCGCACCGATTCTAGGAGC+TGG - chr8_1:12604655-12604674 Msa1179280:intron 60.0%
CCTTGCCTTACCCTCGAAGG+GGG - chr8_1:12605172-12605191 Msa1179280:CDS 60.0%
GTTCTCCCCCTTCGAGGGTA+AGG + chr8_1:12605180-12605199 None:intergenic 60.0%
TACCCTCGAAGGGGGAGAAC+CGG - chr8_1:12605180-12605199 Msa1179280:CDS 60.0%
GCTAAGCAGCCCACATCCTC+AGG - chr8_1:12606492-12606511 Msa1179280:intron 60.0%
TCAGAAGGCGAAGGCCGTGT+GGG + chr8_1:12607256-12607275 None:intergenic 60.0%
ATCAGAAGGCGAAGGCCGTG+TGG + chr8_1:12607257-12607276 None:intergenic 60.0%
CGGCCTTCGCCTTCTGATAG+AGG - chr8_1:12607259-12607278 Msa1179280:intron 60.0%
CTCTAACCGGTGCGATGCAC+GGG + chr8_1:12603750-12603769 None:intergenic 60.0%
AGCTCCTAGAATCGGTGCGG+AGG + chr8_1:12604656-12604675 None:intergenic 60.0%
!! TCCGCACCGATTCTAGGAGC+TGG - chr8_1:12604655-12604674 Msa1179280:intron 60.0%
CCTTGCCTTACCCTCGAAGG+GGG - chr8_1:12605172-12605191 Msa1179280:CDS 60.0%
GTTCTCCCCCTTCGAGGGTA+AGG + chr8_1:12605180-12605199 None:intergenic 60.0%
TACCCTCGAAGGGGGAGAAC+CGG - chr8_1:12605180-12605199 Msa1179280:CDS 60.0%
GCTAAGCAGCCCACATCCTC+AGG - chr8_1:12606492-12606511 Msa1179280:intron 60.0%
TCAGAAGGCGAAGGCCGTGT+GGG + chr8_1:12607256-12607275 None:intergenic 60.0%
ATCAGAAGGCGAAGGCCGTG+TGG + chr8_1:12607257-12607276 None:intergenic 60.0%
CGGCCTTCGCCTTCTGATAG+AGG - chr8_1:12607259-12607278 Msa1179280:intron 60.0%
TGGGCCGTTCAGTGGCTCTC+AGG - chr8_1:12604270-12604289 Msa1179280:CDS 65.0%
CCCCCTTCGAGGGTAAGGCA+AGG + chr8_1:12605175-12605194 None:intergenic 65.0%
!! TGCCGGTTCTCCCCCTTCGA+GGG + chr8_1:12605185-12605204 None:intergenic 65.0%
CGAAGGCCGTGTGGGGAAGT+AGG + chr8_1:12607248-12607267 None:intergenic 65.0%
CAGAAGGCGAAGGCCGTGTG+GGG + chr8_1:12607255-12607274 None:intergenic 65.0%
TGGGCCGTTCAGTGGCTCTC+AGG - chr8_1:12604270-12604289 Msa1179280:CDS 65.0%
CCCCCTTCGAGGGTAAGGCA+AGG + chr8_1:12605175-12605194 None:intergenic 65.0%
!! TGCCGGTTCTCCCCCTTCGA+GGG + chr8_1:12605185-12605204 None:intergenic 65.0%
CGAAGGCCGTGTGGGGAAGT+AGG + chr8_1:12607248-12607267 None:intergenic 65.0%
CAGAAGGCGAAGGCCGTGTG+GGG + chr8_1:12607255-12607274 None:intergenic 65.0%
!! CTGCCGGTTCTCCCCCTTCG+AGG + chr8_1:12605186-12605205 None:intergenic 70.0%
CTCGAAGGGGGAGAACCGGC+AGG - chr8_1:12605184-12605203 Msa1179280:CDS 70.0%
!! CTGCCGGTTCTCCCCCTTCG+AGG + chr8_1:12605186-12605205 None:intergenic 70.0%
CTCGAAGGGGGAGAACCGGC+AGG - chr8_1:12605184-12605203 Msa1179280:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 12603612 12608189 12603612 ID=Msa1179280;Name=Msa1179280
chr8_1 mRNA 12603612 12608189 12603612 ID=Msa1179280-mRNA-1;Parent=Msa1179280;Name=Msa1179280-mRNA-1;_AED=0.24;_eAED=0.24;_QI=489|1|1|1|1|1|9|207|862
chr8_1 exon 12603612 12604575 12603612 ID=Msa1179280-mRNA-1:exon:4571;Parent=Msa1179280-mRNA-1
chr8_1 exon 12604809 12605072 12604809 ID=Msa1179280-mRNA-1:exon:4570;Parent=Msa1179280-mRNA-1
chr8_1 exon 12605157 12605464 12605157 ID=Msa1179280-mRNA-1:exon:4569;Parent=Msa1179280-mRNA-1
chr8_1 exon 12605580 12605687 12605580 ID=Msa1179280-mRNA-1:exon:4568;Parent=Msa1179280-mRNA-1
chr8_1 exon 12605812 12605897 12605812 ID=Msa1179280-mRNA-1:exon:4567;Parent=Msa1179280-mRNA-1
chr8_1 exon 12605986 12606306 12605986 ID=Msa1179280-mRNA-1:exon:4566;Parent=Msa1179280-mRNA-1
chr8_1 exon 12606579 12606819 12606579 ID=Msa1179280-mRNA-1:exon:4565;Parent=Msa1179280-mRNA-1
chr8_1 exon 12606913 12607199 12606913 ID=Msa1179280-mRNA-1:exon:4564;Parent=Msa1179280-mRNA-1
chr8_1 exon 12607484 12608189 12607484 ID=Msa1179280-mRNA-1:exon:4563;Parent=Msa1179280-mRNA-1
chr8_1 five_prime_UTR 12607701 12608189 12607701 ID=Msa1179280-mRNA-1:five_prime_utr;Parent=Msa1179280-mRNA-1
chr8_1 CDS 12607484 12607700 12607484 ID=Msa1179280-mRNA-1:cds;Parent=Msa1179280-mRNA-1
chr8_1 CDS 12606913 12607199 12606913 ID=Msa1179280-mRNA-1:cds;Parent=Msa1179280-mRNA-1
chr8_1 CDS 12606579 12606819 12606579 ID=Msa1179280-mRNA-1:cds;Parent=Msa1179280-mRNA-1
chr8_1 CDS 12605986 12606306 12605986 ID=Msa1179280-mRNA-1:cds;Parent=Msa1179280-mRNA-1
chr8_1 CDS 12605812 12605897 12605812 ID=Msa1179280-mRNA-1:cds;Parent=Msa1179280-mRNA-1
chr8_1 CDS 12605580 12605687 12605580 ID=Msa1179280-mRNA-1:cds;Parent=Msa1179280-mRNA-1
chr8_1 CDS 12605157 12605464 12605157 ID=Msa1179280-mRNA-1:cds;Parent=Msa1179280-mRNA-1
chr8_1 CDS 12604809 12605072 12604809 ID=Msa1179280-mRNA-1:cds;Parent=Msa1179280-mRNA-1
chr8_1 CDS 12603819 12604575 12603819 ID=Msa1179280-mRNA-1:cds;Parent=Msa1179280-mRNA-1
chr8_1 three_prime_UTR 12603612 12603818 12603612 ID=Msa1179280-mRNA-1:three_prime_utr;Parent=Msa1179280-mRNA-1
Gene Sequence

>Msa1179280

ATGTTTTCAAATCCATTTCACAGAAGCCAAAAGGTGAAGGGGACAGTGATATTGATGCATAGGAATGTGTTGGATATCAACGTCCTCACCGCTGGTTTAAATATCACAGGTGGATTCAAGGTTCTTGGTAACCTCACTAGCTCTATATTTGACACCTACGGTTCAATCTTGGGCCGTTCAGTGGCTCTCAGGTTGATTAGTGCTACTAGCGCTGATGAAAGTGGAAAAGGTAAAGTGGGAAAGAGATCGTTTCTTGAAGGTTTTGTTACCTCCGCACCGATTCTAGGAGCTGGACAGTGTGCATACAAAGTTCATTTTCAATGGGATAGTGACATGGGAATTCCAGGAGCATTTTATATTGAGAATTTCATGCTAGGAGAATTTTTTCTTGTAAGTTTAACACTTGAAGATATTCCTAACCATGGAACCATCAACTTTGTTTGCAACTCATGGATTTACAATTGTCGAAAGTACAAAACTGAACGCATTTTCTTTGCCAACAAGACATATCTTCCAAGTGAAACACCAGCTCCATTAGTCTACTATAGACAAGAAGAACTGAAGACTTTACGAGGAGATGGGACAGGTAAACGTGAAGAATGGGAAAGGATCTATGACTATGATGTCTACAATGATGTGGGTGATCCTGATAGAAAAGCTAGCTTAGCTCGTCCCGTTATTGGAGGATCCAACACCTTGCCTTACCCTCGAAGGGGGAGAACCGGCAGGAAACCAGCTAAGAAAGATCCTAAAAGTGAGAGACGGAGCGAGTATATTTATCTTCCAAGAGATGAATCATTTGGTCACTTGAAGTCTTCAGACTTTCTTGTTTACATACTTAAATCAGTATCTCAGAATGTCATACCTGCATTAACATCTGCACTTACATTACAATTCAACAAGCCAGAGTTTAACACCTTTGATGATGTGCGTGCATTTTACGAGGGTGGAATTAAATTGCCTACTAATGAACTTAGCAAACTTAGCCCTATACCGTTGTTCAAGGAACTCCTCAGAACTGATGGTGAAGCACCCCTTAAGTTTCCACCACCTAAAGTCATTCAAGTGAATCAATCTGGATGGATGACTGATGAAGAATTTACAAGAGAGATGATTGCTGGTGTGAATCCACACATCATCAAAAGAATTCAGGAATTTCCACCAAAGAGCAAGCTAGATAGGCAACTCTACGGCGATAATACCAGCACAATAACCAAAGAACAGCTTCAACAAAACATGGGTGGGATCACAGTTGAACAAGCTATCGAAACCAACAAATTGTACATACTTGATCACCATGACTCAATATATCCATATCTGAGGAAAATAAATGCAGCTGACCATACAAAGGCATATGCTACGAGAACCTTCCTTTTCTTACAAAATGATGGAACTTTGAAGCCATTGGCCATTGAGCTAAGCAGCCCACATCCTCAGGCTGATAGCTTTGGTCCTGTTAGTGATATTTACTTTCCTGCAAGTGATGGTGTTGAAGCTTCAATTTGGCTCCTTGCTAAAGCTTATGTAGTTGTAAACGACTCGTGCCATCACCAACTCATCAGCCATTGGTTGAACACTCATGCTGTTGTTGAGCCATTCATCATAGCAACAAATAGGCATCTTAGTGTGGTTCATCCTATTCATAAGCTTCTACTTCCGCACTATCGTGACACAATGAACATTAATGCACTTGCAAGGAGTGTCTTGGTAAATGCAGAGGGTGTTATTGAGAAGACGTTCTTGATGGGAAGTTATTCTCTAGAATTGTCTGCTGTATTATATAAGGATTGGGTTTTCACTGAGCAAGGTTTGCCTAATGATCTACTCAAAAGAGGTGTGGCTCTTAAGGATCCTACTTCCCCACACGGCCTTCGCCTTCTGATAGAGGACTACCCTTATGCTGCAGATGGATTAGAGATATGGGCTGTTATTAAGTCATGGGTTGAAGAATATGTGAATTTCTACTACAAGTCAGATGTAAATATTGCACAAGATTCTGAACTCCAAGCATTTTGGAAAGAACTTGTAGAGGTTGGTCACGGTGACTTGAAAAATGCAACATGGTGGGTTAAGATGCAAACTCGTACAGAGTTGATTGACACTTGCACCACCCTCATATGGATTGCTTCAGCACTTCATGCAGCTGTTAATTTTGGACAATATCCGTACGGAGGTTACATTCTTAACCGACCAACTAAAAGCAGAAGATTAATGCCTAAGAAAGGATCCCCCGAGTATGATGAGCTTTCTAAGAACTATCAAAAGGCGTTTTTGAGAACAATCACACCAAAAAATGACACCCTAATTGACTTGACCATTATAGAGGTCTTGTCAAGACATGCTTCTGATGAACAATACCTCGGACAGAGAATTGAAGGTGATCTTTGGACTTCTGATTCACAACCATTAGAGGCTTTCAAGAGATTTGGAACAAAGTTGGCTGAAATTGAACAAAAACTCACTCAAAGGAATAATGATGAGACTCTAAGGAATCGATATGGACCGGTTAAGATGCCGTATACTTTGCTTTATCCTTCAAGTGAGGAAGGATTGACTTGCAGAGGCATTCCTAATAGTATCTCCATCTAA
Protein sequence

>Msa1179280

MFSNPFHRSQKVKGTVILMHRNVLDINVLTAGLNITGGFKVLGNLTSSIFDTYGSILGRSVALRLISATSADESGKGKVGKRSFLEGFVTSAPILGAGQCAYKVHFQWDSDMGIPGAFYIENFMLGEFFLVSLTLEDIPNHGTINFVCNSWIYNCRKYKTERIFFANKTYLPSETPAPLVYYRQEELKTLRGDGTGKREEWERIYDYDVYNDVGDPDRKASLARPVIGGSNTLPYPRRGRTGRKPAKKDPKSERRSEYIYLPRDESFGHLKSSDFLVYILKSVSQNVIPALTSALTLQFNKPEFNTFDDVRAFYEGGIKLPTNELSKLSPIPLFKELLRTDGEAPLKFPPPKVIQVNQSGWMTDEEFTREMIAGVNPHIIKRIQEFPPKSKLDRQLYGDNTSTITKEQLQQNMGGITVEQAIETNKLYILDHHDSIYPYLRKINAADHTKAYATRTFLFLQNDGTLKPLAIELSSPHPQADSFGPVSDIYFPASDGVEASIWLLAKAYVVVNDSCHHQLISHWLNTHAVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINALARSVLVNAEGVIEKTFLMGSYSLELSAVLYKDWVFTEQGLPNDLLKRGVALKDPTSPHGLRLLIEDYPYAADGLEIWAVIKSWVEEYVNFYYKSDVNIAQDSELQAFWKELVEVGHGDLKNATWWVKMQTRTELIDTCTTLIWIASALHAAVNFGQYPYGGYILNRPTKSRRLMPKKGSPEYDELSKNYQKAFLRTITPKNDTLIDLTIIEVLSRHASDEQYLGQRIEGDLWTSDSQPLEAFKRFGTKLAEIEQKLTQRNNDETLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSISI*