Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739580 | XP_003616932.3 | 98.658 | 298 | 0 | 1 | 1 | 294 | 15 | 312 | 0.0 | 613 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739580 | sp|P46608|HSBH1_SOYBN | 66.284 | 261 | 72 | 7 | 45 | 293 | 123 | 379 | 1.46e-108 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739580 | A5Y4H1 | 98.658 | 298 | 0 | 1 | 1 | 294 | 15 | 312 | 0.0 | 613 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0739580 | TF | HB-KNOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0739580 | 0.800526 | 1.383001e-48 | -8.615850e-47 |
| Msa0006980 | Msa0739580 | 0.876108 | 1.814690e-68 | -8.615850e-47 |
| Msa0015710 | Msa0739580 | 0.860095 | 2.622411e-63 | -8.615850e-47 |
| Msa0016120 | Msa0739580 | 0.839664 | 1.384345e-57 | -8.615850e-47 |
| Msa0019600 | Msa0739580 | 0.862734 | 4.108883e-64 | -8.615850e-47 |
| Msa0050040 | Msa0739580 | 0.819966 | 8.799333e-53 | -8.615850e-47 |
| Msa0055450 | Msa0739580 | 0.863139 | 3.080881e-64 | -8.615850e-47 |
| Msa0074800 | Msa0739580 | 0.802382 | 5.760447e-49 | -8.615850e-47 |
| Msa0080990 | Msa0739580 | 0.841438 | 4.750487e-58 | -8.615850e-47 |
| Msa0102990 | Msa0739580 | 0.818658 | 1.747861e-52 | -8.615850e-47 |
| Msa0109880 | Msa0739580 | 0.854582 | 1.118454e-61 | -8.615850e-47 |
| Msa0111750 | Msa0739580 | 0.831166 | 1.946918e-55 | -8.615850e-47 |
| Msa0641250 | Msa0739580 | 0.838691 | 2.473471e-57 | -8.615850e-47 |
| Msa0641360 | Msa0739580 | 0.829818 | 4.161698e-55 | -8.615850e-47 |
| Msa0669840 | Msa0739580 | 0.892027 | 2.315816e-74 | -8.615850e-47 |
| Msa0679830 | Msa0739580 | 0.808158 | 3.553330e-50 | -8.615850e-47 |
| Msa0680150 | Msa0739580 | 0.800232 | 1.587552e-48 | -8.615850e-47 |
| Msa0707220 | Msa0739580 | 0.809224 | 2.103242e-50 | -8.615850e-47 |
| Msa0709450 | Msa0739580 | 0.818625 | 1.778239e-52 | -8.615850e-47 |
| Msa0711320 | Msa0739580 | 0.824476 | 7.906447e-54 | -8.615850e-47 |
| Msa0725860 | Msa0739580 | 0.826721 | 2.322427e-54 | -8.615850e-47 |
| Msa0739580 | Msa0748000 | 0.840895 | 6.602129e-58 | -8.615850e-47 |
| Msa0739580 | Msa0751890 | 0.820586 | 6.343971e-53 | -8.615850e-47 |
| Msa0739580 | Msa0752840 | 0.826402 | 2.766710e-54 | -8.615850e-47 |
| Msa0739580 | Msa0764820 | 0.813471 | 2.517661e-51 | -8.615850e-47 |
| Msa0739580 | Msa0770290 | 0.845083 | 5.064863e-59 | -8.615850e-47 |
| Msa0739580 | Msa0782230 | 0.803185 | 3.932831e-49 | -8.615850e-47 |
| Msa0739580 | Msa0782360 | 0.969140 | 1.094251e-129 | -8.615850e-47 |
| Msa0739580 | Msa0819890 | 0.854647 | 1.071148e-61 | -8.615850e-47 |
| Msa0739580 | Msa0823400 | 0.806298 | 8.806249e-50 | -8.615850e-47 |
| Msa0739580 | Msa0828830 | 0.866993 | 1.898347e-65 | -8.615850e-47 |
| Msa0739580 | Msa0831940 | 0.834581 | 2.760064e-56 | -8.615850e-47 |
| Msa0739580 | Msa0844560 | 0.808786 | 2.610274e-50 | -8.615850e-47 |
| Msa0739580 | Msa0849280 | 0.858871 | 6.116378e-63 | -8.615850e-47 |
| Msa0739580 | Msa0851020 | 0.864762 | 9.629539e-65 | -8.615850e-47 |
| Msa0739580 | Msa0860160 | 0.828446 | 8.951398e-55 | -8.615850e-47 |
| Msa0739580 | Msa0860280 | 0.961390 | 1.202851e-119 | -8.615850e-47 |
| Msa0739580 | Msa0867350 | 0.874009 | 9.438407e-68 | -8.615850e-47 |
| Msa0739580 | Msa0896350 | 0.807396 | 5.159803e-50 | -8.615850e-47 |
| Msa0739580 | Msa0898730 | 0.879296 | 1.399069e-69 | -8.615850e-47 |
| Msa0739580 | Msa0911540 | 0.805779 | 1.132100e-49 | -8.615850e-47 |
| Msa0739580 | Msa0916640 | 0.809105 | 2.230044e-50 | -8.615850e-47 |
| Msa0739580 | Msa0922750 | 0.810057 | 1.392904e-50 | -8.615850e-47 |
| Msa0739580 | Msa0929870 | 0.854464 | 1.210038e-61 | -8.615850e-47 |
| Msa0739580 | Msa0936410 | 0.800523 | 1.384933e-48 | -8.615850e-47 |
| Msa0739580 | Msa0941820 | 0.812333 | 4.468559e-51 | -8.615850e-47 |
| Msa0739580 | Msa0944760 | 0.855565 | 5.791994e-62 | -8.615850e-47 |
| Msa0739580 | Msa0944880 | 0.831078 | 2.046440e-55 | -8.615850e-47 |
| Msa0739580 | Msa0953540 | 0.814506 | 1.487941e-51 | -8.615850e-47 |
| Msa0739580 | Msa0961560 | 0.835595 | 1.531089e-56 | -8.615850e-47 |
| Msa0739580 | Msa0964840 | 0.811827 | 5.761942e-51 | -8.615850e-47 |
| Msa0739580 | Msa0965310 | 0.800908 | 1.155675e-48 | -8.615850e-47 |
| Msa0739580 | Msa0979510 | 0.810973 | 8.832297e-51 | -8.615850e-47 |
| Msa0739580 | Msa0996270 | 0.824022 | 1.010947e-53 | -8.615850e-47 |
| Msa0739580 | Msa0999300 | 0.876186 | 1.705784e-68 | -8.615850e-47 |
| Msa0739580 | Msa0999320 | 0.842014 | 3.348535e-58 | -8.615850e-47 |
| Msa0739580 | Msa0999350 | 0.824868 | 6.392648e-54 | -8.615850e-47 |
| Msa0739580 | Msa0999360 | 0.834980 | 2.189274e-56 | -8.615850e-47 |
| Msa0739580 | Msa0999400 | 0.815501 | 8.952799e-52 | -8.615850e-47 |
| Msa0739580 | Msa0999410 | 0.837892 | 3.975281e-57 | -8.615850e-47 |
| Msa0739580 | Msa1001870 | 0.842946 | 1.895765e-58 | -8.615850e-47 |
| Msa0739580 | Msa1001890 | 0.853995 | 1.652224e-61 | -8.615850e-47 |
| Msa0739580 | Msa1005360 | 0.800753 | 1.243127e-48 | -8.615850e-47 |
| Msa0739580 | Msa1010840 | 0.806718 | 7.180438e-50 | -8.615850e-47 |
| Msa0739580 | Msa1016600 | 0.809612 | 1.736149e-50 | -8.615850e-47 |
| Msa0739580 | Msa1037770 | 0.858419 | 8.347457e-63 | -8.615850e-47 |
| Msa0739580 | Msa1037890 | 0.834667 | 2.625736e-56 | -8.615850e-47 |
| Msa0739580 | Msa1037900 | 0.854725 | 1.016581e-61 | -8.615850e-47 |
| Msa0739580 | Msa1037910 | 0.859979 | 2.841986e-63 | -8.615850e-47 |
| Msa0739580 | Msa1041530 | 0.818718 | 1.693871e-52 | -8.615850e-47 |
| Msa0739580 | Msa1047990 | 0.802846 | 4.621919e-49 | -8.615850e-47 |
| Msa0739580 | Msa1081570 | 0.853903 | 1.756433e-61 | -8.615850e-47 |
| Msa0739580 | Msa1084520 | 0.859645 | 3.584515e-63 | -8.615850e-47 |
| Msa0739580 | Msa1092020 | 0.817644 | 2.962851e-52 | -8.615850e-47 |
| Msa0739580 | Msa1096210 | 0.821743 | 3.431861e-53 | -8.615850e-47 |
| Msa0739580 | Msa1123880 | 0.805643 | 1.208822e-49 | -8.615850e-47 |
| Msa0739580 | Msa1125810 | 0.821119 | 4.781625e-53 | -8.615850e-47 |
| Msa0739580 | Msa1127140 | 0.840257 | 9.695256e-58 | -8.615850e-47 |
| Msa0739580 | Msa1129960 | 0.844192 | 8.803642e-59 | -8.615850e-47 |
| Msa0739580 | Msa1129970 | 0.842323 | 2.774064e-58 | -8.615850e-47 |
| Msa0739580 | Msa1130010 | 0.832146 | 1.116676e-55 | -8.615850e-47 |
| Msa0739580 | Msa1135380 | 0.832283 | 1.032919e-55 | -8.615850e-47 |
| Msa0739580 | Msa1140640 | 0.805338 | 1.400768e-49 | -8.615850e-47 |
| Msa0739580 | Msa1145020 | 0.837110 | 6.304535e-57 | -8.615850e-47 |
| Msa0739580 | Msa1166400 | 0.828876 | 7.045172e-55 | -8.615850e-47 |
| Msa0739580 | Msa1171310 | 0.854480 | 1.196755e-61 | -8.615850e-47 |
| Msa0739580 | Msa1176160 | 0.836969 | 6.850903e-57 | -8.615850e-47 |
| Msa0739580 | Msa1200440 | 0.815096 | 1.101414e-51 | -8.615850e-47 |
| Msa0739580 | Msa1201110 | 0.837424 | 5.240799e-57 | -8.615850e-47 |
| Msa0739580 | Msa1201160 | 0.871474 | 6.647574e-67 | -8.615850e-47 |
| Msa0739580 | Msa1228190 | 0.894600 | 2.117681e-75 | -8.615850e-47 |
| Msa0739580 | Msa1232730 | 0.806299 | 8.800871e-50 | -8.615850e-47 |
| Msa0739580 | Msa1233560 | 0.831292 | 1.812772e-55 | -8.615850e-47 |
| Msa0739580 | Msa1248040 | 0.804912 | 1.720170e-49 | -8.615850e-47 |
| Msa0739580 | Msa1271260 | 0.856186 | 3.814974e-62 | -8.615850e-47 |
| Msa0739580 | Msa1277400 | 0.829624 | 4.637555e-55 | -8.615850e-47 |
| Msa0739580 | Msa1285900 | 0.804326 | 2.278964e-49 | -8.615850e-47 |
| Msa0739580 | Msa1294290 | 0.857814 | 1.263373e-62 | -8.615850e-47 |
| Msa0739580 | Msa1305310 | 0.823693 | 1.207542e-53 | -8.615850e-47 |
| Msa0739580 | Msa1305510 | 0.885363 | 8.674502e-72 | -8.615850e-47 |
| Msa0739580 | Msa1307150 | 0.813126 | 2.997187e-51 | -8.615850e-47 |
| Msa0739580 | Msa1307190 | 0.834338 | 3.175354e-56 | -8.615850e-47 |
| Msa0739580 | Msa1313970 | 0.808834 | 2.548455e-50 | -8.615850e-47 |
| Msa0739580 | Msa1316540 | 0.815254 | 1.015816e-51 | -8.615850e-47 |
| Msa0739580 | Msa1326630 | 0.829711 | 4.417467e-55 | -8.615850e-47 |
| Msa0739580 | Msa1339580 | 0.821895 | 3.165735e-53 | -8.615850e-47 |
| Msa0739580 | Msa1356990 | 0.835666 | 1.468975e-56 | -8.615850e-47 |
| Msa0739580 | Msa1374550 | 0.826116 | 3.237056e-54 | -8.615850e-47 |
| Msa0739580 | Msa1378870 | 0.827468 | 1.539139e-54 | -8.615850e-47 |
| Msa0739580 | Msa1379970 | 0.888551 | 5.341945e-73 | -8.615850e-47 |
| Msa0739580 | Msa1394890 | 0.861495 | 9.854750e-64 | -8.615850e-47 |
| Msa0739580 | Msa1406780 | 0.963500 | 3.679429e-122 | -8.615850e-47 |
| Msa0739580 | Msa1420060 | 0.822745 | 2.010194e-53 | -8.615850e-47 |
| Msa0739580 | Msa1421550 | 0.888922 | 3.838808e-73 | -8.615850e-47 |
| Msa0739580 | Msa1423460 | 0.849149 | 3.892629e-60 | -8.615850e-47 |
| Msa0739580 | Msa1431850 | 0.958916 | 7.166599e-117 | -8.615850e-47 |
| Msa0739580 | Msa1435480 | 0.819472 | 1.141109e-52 | -8.615850e-47 |
| Msa0739580 | Msa1437710 | 0.815210 | 1.039042e-51 | -8.615850e-47 |
| Msa0739580 | Msa1449940 | 0.847579 | 1.057821e-59 | -8.615850e-47 |
| Msa0739580 | Msa1455320 | 0.838801 | 2.316817e-57 | -8.615850e-47 |
| Msa0739580 | Msa1459530 | 0.844504 | 7.255755e-59 | -8.615850e-47 |
| Msa0739580 | Msa1461060 | 0.880576 | 4.900203e-70 | -8.615850e-47 |
| Msa0739580 | Msa1462530 | 0.820026 | 8.525830e-53 | -8.615850e-47 |
| Msa0124130 | Msa0739580 | 0.901126 | 3.672620e-78 | -8.615850e-47 |
| Msa0125170 | Msa0739580 | 0.807222 | 5.617495e-50 | -8.615850e-47 |
| Msa0141120 | Msa0739580 | 0.861858 | 7.635909e-64 | -8.615850e-47 |
| Msa0147600 | Msa0739580 | 0.809470 | 1.862171e-50 | -8.615850e-47 |
| Msa0149140 | Msa0739580 | 0.896929 | 2.299537e-76 | -8.615850e-47 |
| Msa0152480 | Msa0739580 | 0.811533 | 6.675031e-51 | -8.615850e-47 |
| Msa0152500 | Msa0739580 | 0.840687 | 7.481297e-58 | -8.615850e-47 |
| Msa0156250 | Msa0739580 | 0.879837 | 8.994747e-70 | -8.615850e-47 |
| Msa0185490 | Msa0739580 | 0.846765 | 1.768184e-59 | -8.615850e-47 |
| Msa0197100 | Msa0739580 | 0.883671 | 3.681890e-71 | -8.615850e-47 |
| Msa0203030 | Msa0739580 | 0.815697 | 8.094895e-52 | -8.615850e-47 |
| Msa0212080 | Msa0739580 | 0.823404 | 1.410433e-53 | -8.615850e-47 |
| Msa0212150 | Msa0739580 | 0.910625 | 1.518917e-82 | -8.615850e-47 |
| Msa0215640 | Msa0739580 | 0.843641 | 1.236553e-58 | -8.615850e-47 |
| Msa0219190 | Msa0739580 | 0.811356 | 7.295136e-51 | -8.615850e-47 |
| Msa0221290 | Msa0739580 | 0.838291 | 3.138547e-57 | -8.615850e-47 |
| Msa0373960 | Msa0739580 | 0.812075 | 5.087540e-51 | -8.615850e-47 |
| Msa0375680 | Msa0739580 | 0.829524 | 4.906225e-55 | -8.615850e-47 |
| Msa0375700 | Msa0739580 | 0.807367 | 5.232456e-50 | -8.615850e-47 |
| Msa0384910 | Msa0739580 | 0.861826 | 7.807546e-64 | -8.615850e-47 |
| Msa0392420 | Msa0739580 | 0.860387 | 2.140108e-63 | -8.615850e-47 |
| Msa0392460 | Msa0739580 | 0.856546 | 2.990439e-62 | -8.615850e-47 |
| Msa0392490 | Msa0739580 | 0.837111 | 6.303751e-57 | -8.615850e-47 |
| Msa0406000 | Msa0739580 | 0.930314 | 1.960336e-93 | -8.615850e-47 |
| Msa0415320 | Msa0739580 | 0.814950 | 1.186598e-51 | -8.615850e-47 |
| Msa0417440 | Msa0739580 | 0.801264 | 9.773844e-49 | -8.615850e-47 |
| Msa0424330 | Msa0739580 | 0.873861 | 1.059072e-67 | -8.615850e-47 |
| Msa0424340 | Msa0739580 | 0.881881 | 1.660474e-70 | -8.615850e-47 |
| Msa0424350 | Msa0739580 | 0.883305 | 5.019164e-71 | -8.615850e-47 |
| Msa0451400 | Msa0739580 | 0.929458 | 6.752194e-93 | -8.615850e-47 |
| Msa0471240 | Msa0739580 | 0.813091 | 3.050645e-51 | -8.615850e-47 |
| Msa0239030 | Msa0739580 | 0.894842 | 1.684498e-75 | -8.615850e-47 |
| Msa0252630 | Msa0739580 | 0.843895 | 1.057704e-58 | -8.615850e-47 |
| Msa0252770 | Msa0739580 | 0.917061 | 8.392887e-86 | -8.615850e-47 |
| Msa0276740 | Msa0739580 | 0.870147 | 1.817383e-66 | -8.615850e-47 |
| Msa0289920 | Msa0739580 | 0.904666 | 9.671261e-80 | -8.615850e-47 |
| Msa0291330 | Msa0739580 | 0.807292 | 5.428301e-50 | -8.615850e-47 |
| Msa0298240 | Msa0739580 | 0.809984 | 1.444069e-50 | -8.615850e-47 |
| Msa0306120 | Msa0739580 | 0.937273 | 4.527755e-98 | -8.615850e-47 |
| Msa0316680 | Msa0739580 | 0.879863 | 8.805250e-70 | -8.615850e-47 |
| Msa0322830 | Msa0739580 | 0.817073 | 3.983051e-52 | -8.615850e-47 |
| Msa0322840 | Msa0739580 | 0.841824 | 3.759226e-58 | -8.615850e-47 |
| Msa0322860 | Msa0739580 | 0.817982 | 2.485933e-52 | -8.615850e-47 |
| Msa0329620 | Msa0739580 | 0.921773 | 2.326530e-88 | -8.615850e-47 |
| Msa0333450 | Msa0739580 | 0.808554 | 2.925098e-50 | -8.615850e-47 |
| Msa0333700 | Msa0739580 | 0.824674 | 7.101524e-54 | -8.615850e-47 |
| Msa0338970 | Msa0739580 | 0.812482 | 4.146450e-51 | -8.615850e-47 |
| Msa0340480 | Msa0739580 | 0.823684 | 1.212947e-53 | -8.615850e-47 |
| Msa0343660 | Msa0739580 | 0.862612 | 4.478360e-64 | -8.615850e-47 |
| Msa0344570 | Msa0739580 | 0.823296 | 1.494957e-53 | -8.615850e-47 |
| Msa0351770 | Msa0739580 | 0.817118 | 3.892425e-52 | -8.615850e-47 |
| Msa0359250 | Msa0739580 | 0.921249 | 4.559785e-88 | -8.615850e-47 |
| Msa0487570 | Msa0739580 | 0.857969 | 1.136022e-62 | -8.615850e-47 |
| Msa0487630 | Msa0739580 | 0.846940 | 1.583736e-59 | -8.615850e-47 |
| Msa0492190 | Msa0739580 | 0.912735 | 1.384650e-83 | -8.615850e-47 |
| Msa0515950 | Msa0739580 | 0.884898 | 1.293938e-71 | -8.615850e-47 |
| Msa0534930 | Msa0739580 | 0.841705 | 4.041568e-58 | -8.615850e-47 |
| Msa0535040 | Msa0739580 | 0.833804 | 4.322060e-56 | -8.615850e-47 |
| Msa0537920 | Msa0739580 | 0.829691 | 4.467404e-55 | -8.615850e-47 |
| Msa0538220 | Msa0739580 | 0.808788 | 2.607140e-50 | -8.615850e-47 |
| Msa0575740 | Msa0739580 | 0.831124 | 1.993495e-55 | -8.615850e-47 |
| Msa0591790 | Msa0739580 | 0.878712 | 2.249471e-69 | -8.615850e-47 |
| Msa0594090 | Msa0739580 | 0.878853 | 2.006763e-69 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739580 | MtrunA17_Chr5g0439391 | 98.658 | 298 | 0 | 1 | 1 | 294 | 1 | 298 | 0.0 | 613 |
| Msa0739580 | MtrunA17_Chr2g0289201 | 64.683 | 252 | 78 | 3 | 47 | 288 | 118 | 368 | 3.01e-105 | 311 |
| Msa0739580 | MtrunA17_Chr1g0151961 | 54.733 | 243 | 100 | 2 | 40 | 272 | 113 | 355 | 5.10e-76 | 236 |
| Msa0739580 | MtrunA17_Chr5g0413201 | 52.016 | 248 | 100 | 5 | 38 | 271 | 64 | 306 | 9.21e-76 | 234 |
| Msa0739580 | MtrunA17_Chr1g0192791 | 47.451 | 255 | 105 | 5 | 41 | 274 | 14 | 260 | 1.97e-69 | 216 |
| Msa0739580 | MtrunA17_Chr3g0137241 | 32.669 | 251 | 129 | 8 | 47 | 259 | 107 | 355 | 1.53e-34 | 128 |
| Msa0739580 | MtrunA17_Chr2g0305101 | 32.114 | 246 | 127 | 5 | 50 | 259 | 98 | 339 | 2.54e-34 | 128 |
| Msa0739580 | MtrunA17_Chr1g0149651 | 32.245 | 245 | 132 | 5 | 49 | 259 | 176 | 420 | 1.68e-33 | 127 |
| Msa0739580 | MtrunA17_Chr5g0398181 | 32.411 | 253 | 135 | 6 | 43 | 259 | 24 | 276 | 1.03e-32 | 122 |
| Msa0739580 | MtrunA17_Chr4g0065241 | 30.189 | 265 | 139 | 7 | 38 | 259 | 54 | 315 | 2.12e-31 | 119 |
| Msa0739580 | MtrunA17_Chr8g0373801 | 39.394 | 99 | 53 | 4 | 172 | 265 | 546 | 642 | 1.94e-12 | 67.8 |
| Msa0739580 | MtrunA17_Chr5g0403251 | 39.362 | 94 | 51 | 3 | 172 | 261 | 494 | 585 | 3.79e-12 | 66.6 |
| Msa0739580 | MtrunA17_Chr3g0141941 | 35.135 | 111 | 60 | 3 | 157 | 261 | 302 | 406 | 3.55e-11 | 63.5 |
| Msa0739580 | MtrunA17_Chr8g0387321 | 37.634 | 93 | 56 | 1 | 171 | 261 | 338 | 430 | 6.46e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0739580 | AT1G62360.1 | 65.234 | 256 | 75 | 4 | 46 | 288 | 121 | 375 | 7.72e-104 | 308 |
| Msa0739580 | AT4G08150.1 | 56.962 | 237 | 89 | 3 | 49 | 272 | 137 | 373 | 3.77e-75 | 235 |
| Msa0739580 | AT1G23380.1 | 49.200 | 250 | 112 | 5 | 36 | 274 | 75 | 320 | 1.20e-72 | 226 |
| Msa0739580 | AT1G70510.1 | 48.594 | 249 | 111 | 4 | 38 | 274 | 61 | 304 | 4.14e-71 | 222 |
| Msa0739580 | AT1G23380.2 | 48.810 | 252 | 112 | 6 | 36 | 274 | 75 | 322 | 1.06e-70 | 222 |
| Msa0739580 | AT1G70510.2 | 47.826 | 253 | 111 | 5 | 38 | 274 | 61 | 308 | 7.54e-69 | 216 |
| Msa0739580 | AT1G62990.1 | 30.400 | 250 | 141 | 4 | 43 | 259 | 26 | 275 | 7.96e-35 | 127 |
| Msa0739580 | AT5G11060.1 | 34.800 | 250 | 128 | 9 | 43 | 259 | 120 | 367 | 1.90e-34 | 129 |
| Msa0739580 | AT5G25220.2 | 30.242 | 248 | 142 | 6 | 43 | 259 | 156 | 403 | 4.74e-34 | 128 |
| Msa0739580 | AT5G25220.1 | 30.242 | 248 | 142 | 6 | 43 | 259 | 156 | 403 | 6.92e-34 | 128 |
| Msa0739580 | AT4G32040.2 | 28.216 | 241 | 142 | 4 | 50 | 259 | 122 | 362 | 5.31e-30 | 117 |
| Msa0739580 | AT4G32040.1 | 28.216 | 241 | 142 | 4 | 50 | 259 | 122 | 362 | 5.41e-30 | 117 |
| Msa0739580 | AT1G14760.2 | 34.579 | 107 | 61 | 3 | 47 | 148 | 34 | 136 | 9.70e-12 | 62.0 |
| Msa0739580 | AT4G36870.2 | 33.607 | 122 | 72 | 5 | 145 | 261 | 442 | 559 | 1.35e-11 | 65.5 |
| Msa0739580 | AT4G36870.1 | 33.607 | 122 | 72 | 5 | 145 | 261 | 442 | 559 | 1.35e-11 | 65.5 |
| Msa0739580 | AT2G23760.2 | 37.234 | 94 | 53 | 3 | 172 | 261 | 394 | 485 | 2.43e-11 | 64.7 |
| Msa0739580 | AT2G23760.1 | 37.234 | 94 | 53 | 3 | 172 | 261 | 394 | 485 | 2.43e-11 | 64.7 |
| Msa0739580 | AT2G23760.3 | 37.234 | 94 | 53 | 3 | 172 | 261 | 394 | 485 | 2.43e-11 | 64.7 |
| Msa0739580 | AT5G41410.1 | 40.698 | 86 | 43 | 2 | 207 | 286 | 398 | 481 | 8.47e-11 | 62.8 |
Find 86 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTGCAAGTGCTTGCTTT+TGG | 0.251155 | 5_1:+57930276 | None:intergenic |
| TTGCAGTGAGATTTCTTCTA+TGG | 0.262136 | 5_1:-57934194 | Msa0739580:exon |
| ATGAATCTCACTGCCCTTCT+TGG | 0.277420 | 5_1:+57934805 | None:intergenic |
| TGTTGTTGTTGGTGTTGTTC+TGG | 0.309721 | 5_1:+57934065 | None:intergenic |
| GTGTGGGGACTAAGCAAAAT+AGG | 0.311837 | 5_1:-57934360 | Msa0739580:intron |
| GAAATATTGAATGGCTCTTC+AGG | 0.317305 | 5_1:-57933611 | Msa0739580:CDS |
| CCTCTGAGTAACAATTCTTC+TGG | 0.333607 | 5_1:-57934118 | Msa0739580:CDS |
| CTGATAAATATGTAGAGTTC+AGG | 0.337698 | 5_1:+57929943 | None:intergenic |
| CTCTTACCTCAATTGCTTGA+AGG | 0.355056 | 5_1:-57933993 | Msa0739580:intron |
| TGATGAACATGGAAACTAAT+AGG | 0.357473 | 5_1:-57934156 | Msa0739580:CDS |
| TCTAAGCTAGCCACCACTTC+AGG | 0.359706 | 5_1:+57933653 | None:intergenic |
| AAAGTATAATAATCTGTAAA+AGG | 0.363764 | 5_1:+57934527 | None:intergenic |
| TGGGAAAGAGTCAGAAGAAT+AGG | 0.366718 | 5_1:+57934486 | None:intergenic |
| TGTTGTGTTGTGTTAATTGC+AGG | 0.368555 | 5_1:+57934699 | None:intergenic |
| CTTCACCTTGAGTAGTATCT+AGG | 0.374756 | 5_1:+57931294 | None:intergenic |
| TCCAGGTTTGGATCAGTTCA+TGG | 0.403203 | 5_1:-57933552 | Msa0739580:intron |
| TGAAGTGGTGGCTAGCTTAG+AGG | 0.404107 | 5_1:-57933651 | Msa0739580:CDS |
| GAAAAGCATGGCTTCTTTGA+AGG | 0.406625 | 5_1:+57933481 | None:intergenic |
| ATCCCTACAAGTGTTGTTGT+TGG | 0.410423 | 5_1:+57934054 | None:intergenic |
| ACACCAACAACAACACTTGT+AGG | 0.415678 | 5_1:-57934057 | Msa0739580:CDS |
| CGCAAGTATAGTGGATATCT+AGG | 0.434219 | 5_1:-57931245 | Msa0739580:CDS |
| TACTACTCAAGGTGAAGATC+AGG | 0.439850 | 5_1:-57931288 | Msa0739580:CDS |
| AGTTGCTGTCGAGCTTCCTT+TGG | 0.440818 | 5_1:+57931176 | None:intergenic |
| GGCATAGCATCCATAGGAAA+TGG | 0.441925 | 5_1:+57930119 | None:intergenic |
| CTCGACAGCAACTACTTGAT+TGG | 0.448986 | 5_1:-57931166 | Msa0739580:CDS |
| GAAACTATGTTAGGGTTTGG+AGG | 0.466056 | 5_1:-57934223 | Msa0739580:intron |
| GGGAAAGAGTCAGAAGAATA+GGG | 0.468134 | 5_1:+57934487 | None:intergenic |
| CTTCAATTCCGGGAGTACTC+TGG | 0.471621 | 5_1:-57934420 | Msa0739580:five_prime_UTR |
| GGAAGTAGTAGTTCTTGTAT+AGG | 0.474614 | 5_1:-57933581 | Msa0739580:intron |
| AACTACTTGATTGGTGGAGC+AGG | 0.476464 | 5_1:-57931157 | Msa0739580:CDS |
| ATTTGAAGCAGATCAACAAT+TGG | 0.483386 | 5_1:-57930241 | Msa0739580:CDS |
| TCAGGACCTTCAAGCAATTG+AGG | 0.486076 | 5_1:+57933987 | None:intergenic |
| GTAATCTTTAATCTGTAGAA+AGG | 0.488229 | 5_1:-57929990 | Msa0739580:three_prime_UTR |
| GTTGCTGTTTCAACTGACTT+TGG | 0.488737 | 5_1:-57933428 | Msa0739580:intron |
| CAGCTTCTACGCAAGTATAG+TGG | 0.489736 | 5_1:-57931254 | Msa0739580:CDS |
| AAAAGCATGGCTTCTTTGAA+GGG | 0.505700 | 5_1:+57933482 | None:intergenic |
| TTTCATAAACAGTAAAGTGT+GGG | 0.507878 | 5_1:-57934376 | Msa0739580:five_prime_UTR |
| TGATAAATATGTAGAGTTCA+GGG | 0.516722 | 5_1:+57929944 | None:intergenic |
| TAAAATTACCTAGGTTGTGA+AGG | 0.521849 | 5_1:-57930043 | Msa0739580:three_prime_UTR |
| GGATATGCAATTTGCTGTGA+TGG | 0.523714 | 5_1:-57930180 | Msa0739580:CDS |
| GCTGAGACTCAATTCTTGAA+AGG | 0.524479 | 5_1:+57933459 | None:intergenic |
| GGTGGAGCAGGCATTACAAA+TGG | 0.526535 | 5_1:-57931145 | Msa0739580:CDS |
| CACTTGTAGGGATAAAATCA+TGG | 0.535342 | 5_1:-57934044 | Msa0739580:CDS |
| GACAGCAACTACTTGATTGG+TGG | 0.536393 | 5_1:-57931163 | Msa0739580:CDS |
| AGAATAGTTACCGATGGGTA+AGG | 0.537725 | 5_1:+57931122 | None:intergenic |
| CTTCAAGCAATTGAGGTAAG+AGG | 0.538407 | 5_1:+57933994 | None:intergenic |
| CAAGCACTTGCAGAATCCAC+AGG | 0.539141 | 5_1:-57930269 | Msa0739580:CDS |
| AATGGCTCTTCAGGAAGGAC+AGG | 0.539828 | 5_1:-57933602 | Msa0739580:CDS |
| GACAAGAGACGAGGAAAGAG+AGG | 0.541929 | 5_1:+57934016 | None:intergenic |
| ATAATTGTCCAGAGTACTCC+CGG | 0.545971 | 5_1:+57934412 | None:intergenic |
| TGTGTTGTGTTAATTGCAGG+TGG | 0.551211 | 5_1:+57934702 | None:intergenic |
| AAGAATTGAGTCTCAGCTCA+AGG | 0.557965 | 5_1:-57933453 | Msa0739580:CDS |
| GTATAATAATCTGTAAAAGG+TGG | 0.560540 | 5_1:+57934530 | None:intergenic |
| TGTAGAGTTCAGGGATAGTG+TGG | 0.560936 | 5_1:+57929953 | None:intergenic |
| TGTTTGATGTACACAACAGA+AGG | 0.567042 | 5_1:-57934604 | Msa0739580:five_prime_UTR |
| CACCAACAACAACACTTGTA+GGG | 0.569598 | 5_1:-57934056 | Msa0739580:CDS |
| AGTAATTGCGTAGACCAAGA+AGG | 0.570221 | 5_1:-57934819 | Msa0739580:five_prime_UTR |
| GTAATTGCGTAGACCAAGAA+GGG | 0.575239 | 5_1:-57934818 | Msa0739580:five_prime_UTR |
| AATTCTTGAAAGGAAAAGCA+TGG | 0.577216 | 5_1:+57933469 | None:intergenic |
| TTAATGTGCTAAAGAAGCAT+AGG | 0.578609 | 5_1:+57930098 | None:intergenic |
| TTAATCAGAGAAAACGCCAC+TGG | 0.580206 | 5_1:-57930214 | Msa0739580:CDS |
| GGATGCCACAAATTACTACA+TGG | 0.582043 | 5_1:-57930159 | Msa0739580:CDS |
| GATGTGCAAGCCATTTCCTA+TGG | 0.586987 | 5_1:-57930129 | Msa0739580:CDS |
| TTGCAGGTGGAGACAGAGAG+AGG | 0.587313 | 5_1:+57934715 | None:intergenic |
| GGTTGGAGCACCTCCTGAAG+TGG | 0.595718 | 5_1:-57933666 | Msa0739580:CDS |
| TGCAGGTGGAGACAGAGAGA+GGG | 0.597322 | 5_1:+57934716 | None:intergenic |
| GCAAAATGTGAAATATTGAA+TGG | 0.601951 | 5_1:-57933620 | Msa0739580:CDS |
| TCAAAATCAAATGATGAACA+TGG | 0.604915 | 5_1:-57934167 | Msa0739580:CDS |
| TTACAAATGGCCTTACCCAT+CGG | 0.606989 | 5_1:-57931132 | Msa0739580:intron |
| TGGAGCACCTCCTGAAGTGG+TGG | 0.608141 | 5_1:-57933663 | Msa0739580:CDS |
| TATTGAATGGCTCTTCAGGA+AGG | 0.613053 | 5_1:-57933607 | Msa0739580:CDS |
| GCAAATTGCATATCCTCAGA+AGG | 0.614720 | 5_1:+57930188 | None:intergenic |
| TTCATAAACAGTAAAGTGTG+GGG | 0.617163 | 5_1:-57934375 | Msa0739580:five_prime_UTR |
| ACGCCACTGGAAGCCTTCTG+AGG | 0.619253 | 5_1:-57930201 | Msa0739580:CDS |
| ATATTGTACCTTCACAACCT+AGG | 0.627623 | 5_1:+57930035 | None:intergenic |
| AGCATAGGCATAGCATCCAT+AGG | 0.634428 | 5_1:+57930113 | None:intergenic |
| CTTTAATCTGTAGAAAGGTG+AGG | 0.636593 | 5_1:-57929985 | Msa0739580:three_prime_UTR |
| AAAGAATGGAAAGTTACCAA+AGG | 0.641055 | 5_1:-57931192 | Msa0739580:CDS |
| AAGCTAGCCACCACTTCAGG+AGG | 0.647427 | 5_1:+57933656 | None:intergenic |
| AACAACCTAGATACTACTCA+AGG | 0.648557 | 5_1:-57931299 | Msa0739580:CDS |
| CCAGAAGAATTGTTACTCAG+AGG | 0.660627 | 5_1:+57934118 | None:intergenic |
| CTGCTTCAAATCTAGCCCTG+TGG | 0.665421 | 5_1:+57930253 | None:intergenic |
| AAGCACTTGCAGAATCCACA+GGG | 0.665978 | 5_1:-57930268 | Msa0739580:CDS |
| TATCCTCAGAAGGCTTCCAG+TGG | 0.672824 | 5_1:+57930198 | None:intergenic |
| AGGTAAGAGGACAAGAGACG+AGG | 0.679022 | 5_1:+57934007 | None:intergenic |
| AGGTTTGGATCAGTTCATGG+AGG | 0.735955 | 5_1:-57933549 | Msa0739580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAATAAATATTTTTTA+AGG | + | chr5_1:57933289-57933308 | None:intergenic | 0.0% |
| !!! | GATTTTTTTTTTAAACTTTA+TGG | - | chr5_1:57930968-57930987 | Msa0739580:intron | 10.0% |
| !! | ATGAAGATAATATAATTTAA+GGG | + | chr5_1:57931315-57931334 | None:intergenic | 10.0% |
| !! | TCTTTAAATTAAATTAAACT+TGG | - | chr5_1:57932190-57932209 | Msa0739580:intron | 10.0% |
| !! | ATTATATTGAAATTAACAAA+TGG | + | chr5_1:57932607-57932626 | None:intergenic | 10.0% |
| !!! | AGATTCATTTTCATTTTTAT+TGG | - | chr5_1:57929921-57929940 | Msa0739580:three_prime_UTR | 15.0% |
| !!! | GATTCATTTTCATTTTTATT+GGG | - | chr5_1:57929922-57929941 | Msa0739580:three_prime_UTR | 15.0% |
| !! | AAAGTATAATAATCTGTAAA+AGG | + | chr5_1:57930187-57930206 | None:intergenic | 15.0% |
| !! | TAGAAAAAACTAAAAAACTT+GGG | + | chr5_1:57930247-57930266 | None:intergenic | 15.0% |
| !! | CATGAAGATAATATAATTTA+AGG | + | chr5_1:57931316-57931335 | None:intergenic | 15.0% |
| !!! | AAGTAAATATTCATTTTAAC+TGG | - | chr5_1:57931369-57931388 | Msa0739580:intron | 15.0% |
| !! | TATTTACTTACGATAAAAAA+GGG | + | chr5_1:57931596-57931615 | None:intergenic | 15.0% |
| !!! | TATAATTTTTTTGCACAAAT+GGG | - | chr5_1:57931936-57931955 | Msa0739580:intron | 15.0% |
| !! | TTGTGAAATATTTATGTATT+TGG | + | chr5_1:57932705-57932724 | None:intergenic | 15.0% |
| !!! | ATTATTCTTTTATCAAATGT+AGG | - | chr5_1:57932832-57932851 | Msa0739580:intron | 15.0% |
| !!! | TTATTCTTTTATCAAATGTA+GGG | - | chr5_1:57932833-57932852 | Msa0739580:intron | 15.0% |
| !!! | TTTAGAGTTTTTCATATAAT+AGG | - | chr5_1:57933757-57933776 | Msa0739580:intron | 15.0% |
| !! | TTTGTGAATTATTTGTAATT+AGG | - | chr5_1:57933896-57933915 | Msa0739580:intron | 15.0% |
| !! | AAACTTTAAATATTGTCATT+AGG | + | chr5_1:57933937-57933956 | None:intergenic | 15.0% |
| !!! | ATTTTAGAATTTAAAAGATC+AGG | - | chr5_1:57934206-57934225 | Msa0739580:five_prime_UTR | 15.0% |
| !!! | AGGTAATTTTAAAATAGATA+GGG | + | chr5_1:57934659-57934678 | None:intergenic | 15.0% |
| !!! | TAGGTAATTTTAAAATAGAT+AGG | + | chr5_1:57934660-57934679 | None:intergenic | 15.0% |
| !!! | TATCTATTTTAAAATTACCT+AGG | - | chr5_1:57934659-57934678 | Msa0739580:five_prime_UTR | 15.0% |
| !! | GTAGAAAAAACTAAAAAACT+TGG | + | chr5_1:57930248-57930267 | None:intergenic | 20.0% |
| !! | ATGCATATGCATTATTATAT+AGG | - | chr5_1:57930412-57930431 | Msa0739580:intron | 20.0% |
| !!! | TTTGTTTTGAAACTATGTTA+GGG | - | chr5_1:57930480-57930499 | Msa0739580:intron | 20.0% |
| !!! | AATGTTAATAAACTTTTCCA+AGG | + | chr5_1:57931347-57931366 | None:intergenic | 20.0% |
| !!! | ATTCTTTTTTTCTCTTTTCT+AGG | + | chr5_1:57931447-57931466 | None:intergenic | 20.0% |
| !! | TAGAAAAGAGAAAAAAAGAA+TGG | - | chr5_1:57931446-57931465 | Msa0739580:intron | 20.0% |
| !! | CTATTTACTTACGATAAAAA+AGG | + | chr5_1:57931597-57931616 | None:intergenic | 20.0% |
| !!! | TTGAAATTGTGTTTTTAACA+TGG | - | chr5_1:57931651-57931670 | Msa0739580:intron | 20.0% |
| !!! | AATTAAGTAAAATGAGGTTT+TGG | - | chr5_1:57931734-57931753 | Msa0739580:intron | 20.0% |
| !!! | TATGTCTAAAGTAATTTACA+CGG | - | chr5_1:57931891-57931910 | Msa0739580:intron | 20.0% |
| !!! | GTATAATTTTTTTGCACAAA+TGG | - | chr5_1:57931935-57931954 | Msa0739580:intron | 20.0% |
| !!! | TAAATTAAACTTGGTGAAAA+AGG | - | chr5_1:57932199-57932218 | Msa0739580:intron | 20.0% |
| !! | AAGTTTAATTCTCAAAACTA+AGG | - | chr5_1:57932275-57932294 | Msa0739580:intron | 20.0% |
| !! | TACATAAATATTTCACAACT+TGG | - | chr5_1:57932707-57932726 | Msa0739580:intron | 20.0% |
| !! | ACATAAATATTTCACAACTT+GGG | - | chr5_1:57932708-57932727 | Msa0739580:intron | 20.0% |
| !! | TAAGTGCAATTAGTAATATT+TGG | - | chr5_1:57933001-57933020 | Msa0739580:intron | 20.0% |
| !! | ACAATTGCCTATAAAAAAAA+GGG | + | chr5_1:57933063-57933082 | None:intergenic | 20.0% |
| !! | AACAATTGCCTATAAAAAAA+AGG | + | chr5_1:57933064-57933083 | None:intergenic | 20.0% |
| !! | TTAGTTTAGTAAATTGTTAG+AGG | - | chr5_1:57933082-57933101 | Msa0739580:intron | 20.0% |
| !! | TAGTTTAGTAAATTGTTAGA+GGG | - | chr5_1:57933083-57933102 | Msa0739580:intron | 20.0% |
| !!! | TTTTTGAAGAAGAAAAAGAA+TGG | - | chr5_1:57933505-57933524 | Msa0739580:CDS | 20.0% |
| !! | TATCTTGATTTATAGCATTT+AGG | - | chr5_1:57933706-57933725 | Msa0739580:intron | 20.0% |
| !!! | TTTAGGTTTGATTATTTTGA+AGG | - | chr5_1:57933723-57933742 | Msa0739580:intron | 20.0% |
| !! | ATAAATCATTGACATATTCA+AGG | + | chr5_1:57933812-57933831 | None:intergenic | 20.0% |
| !!! | GTTTCTGATGTTTTAAATAA+GGG | + | chr5_1:57934102-57934121 | None:intergenic | 20.0% |
| !!! | AGTTTCTGATGTTTTAAATA+AGG | + | chr5_1:57934103-57934122 | None:intergenic | 20.0% |
| !!! | TACTGATTATTTTAACGTTA+GGG | - | chr5_1:57934127-57934146 | Msa0739580:CDS | 20.0% |
| !! | AATGAAACCTTAATATCAAA+TGG | - | chr5_1:57934353-57934372 | Msa0739580:intron | 20.0% |
| !! | TTATTAGCCATTTGATATTA+AGG | + | chr5_1:57934363-57934382 | None:intergenic | 20.0% |
| !!! | CATTTTCATTTTTATTGGGA+AGG | - | chr5_1:57929926-57929945 | Msa0739580:three_prime_UTR | 25.0% |
| ! | GTATAATAATCTGTAAAAGG+TGG | + | chr5_1:57930184-57930203 | None:intergenic | 25.0% |
| !!! | AGATTTTTTAGCTTCAATTC+CGG | - | chr5_1:57930280-57930299 | Msa0739580:CDS | 25.0% |
| !! | TTTTCATAAACAGTAAAGTG+TGG | - | chr5_1:57930334-57930353 | Msa0739580:intron | 25.0% |
| ! | TTTCATAAACAGTAAAGTGT+GGG | - | chr5_1:57930335-57930354 | Msa0739580:intron | 25.0% |
| !!! | CTTTGTTTTGAAACTATGTT+AGG | - | chr5_1:57930479-57930498 | Msa0739580:intron | 25.0% |
| ! | TCAAAATCAAATGATGAACA+TGG | - | chr5_1:57930544-57930563 | Msa0739580:intron | 25.0% |
| !! | TCTCAAAAACAAACATTTTG+TGG | + | chr5_1:57930950-57930969 | None:intergenic | 25.0% |
| !!! | TTAAGTGTGATTTTTTTTGC+AGG | - | chr5_1:57931024-57931043 | Msa0739580:intron | 25.0% |
| ! | GCAAAATGTGAAATATTGAA+TGG | - | chr5_1:57931091-57931110 | Msa0739580:intron | 25.0% |
| !! | ATAAACTTTTCCAAGGATAA+TGG | + | chr5_1:57931340-57931359 | None:intergenic | 25.0% |
| !! | TTCTCTTTTCTAGGTTTTTA+GGG | + | chr5_1:57931438-57931457 | None:intergenic | 25.0% |
| !! | TTTCTCTTTTCTAGGTTTTT+AGG | + | chr5_1:57931439-57931458 | None:intergenic | 25.0% |
| !!! | TAGTGTGATTAGAGTTTTAA+AGG | - | chr5_1:57931614-57931633 | Msa0739580:intron | 25.0% |
| ! | AAATGATAGATTACTTCCTA+TGG | - | chr5_1:57931708-57931727 | Msa0739580:intron | 25.0% |
| ! | AATGATAGATTACTTCCTAT+GGG | - | chr5_1:57931709-57931728 | Msa0739580:intron | 25.0% |
| !! | ATTTTACTTAATTTCCCCAT+AGG | + | chr5_1:57931727-57931746 | None:intergenic | 25.0% |
| ! | GGGAATTTGAATAAAAATTG+AGG | + | chr5_1:57931970-57931989 | None:intergenic | 25.0% |
| ! | AACAAAATTGAACATAACCA+AGG | + | chr5_1:57932056-57932075 | None:intergenic | 25.0% |
| ! | ATTCCTTAACTTCATTTACA+TGG | - | chr5_1:57932139-57932158 | Msa0739580:intron | 25.0% |
| ! | ACTTTATAGAGAACGAATTA+AGG | + | chr5_1:57932259-57932278 | None:intergenic | 25.0% |
| !! | AGGTAAATTTTTCATTTGCA+TGG | - | chr5_1:57932295-57932314 | Msa0739580:intron | 25.0% |
| ! | AACTAAACTACTACAAAAGA+GGG | + | chr5_1:57932334-57932353 | None:intergenic | 25.0% |
| ! | AAACTAAACTACTACAAAAG+AGG | + | chr5_1:57932335-57932354 | None:intergenic | 25.0% |
| ! | GTTCTTTCCTATCATTAAAT+GGG | + | chr5_1:57932529-57932548 | None:intergenic | 25.0% |
| ! | AGTTCTTTCCTATCATTAAA+TGG | + | chr5_1:57932530-57932549 | None:intergenic | 25.0% |
| !!! | AAATGCTTCATTTTTACACA+TGG | - | chr5_1:57932633-57932652 | Msa0739580:intron | 25.0% |
| !!! | AATGCTTCATTTTTACACAT+GGG | - | chr5_1:57932634-57932653 | Msa0739580:intron | 25.0% |
| ! | TTAAAAGTAAGCTCAAATGA+TGG | - | chr5_1:57932671-57932690 | Msa0739580:intron | 25.0% |
| ! | CATAAATATTTCACAACTTG+GGG | - | chr5_1:57932709-57932728 | Msa0739580:intron | 25.0% |
| ! | ATAAATATTTCACAACTTGG+GGG | - | chr5_1:57932710-57932729 | Msa0739580:intron | 25.0% |
| ! | TAAGATTCTTAATGAAGAAG+TGG | + | chr5_1:57932771-57932790 | None:intergenic | 25.0% |
| ! | CTTCTTCATTAAGAATCTTA+TGG | - | chr5_1:57932771-57932790 | Msa0739580:intron | 25.0% |
| ! | TTTAGTACATTAGTTGTTGT+TGG | - | chr5_1:57932928-57932947 | Msa0739580:intron | 25.0% |
| ! | CAATTGCCTATAAAAAAAAG+GGG | + | chr5_1:57933062-57933081 | None:intergenic | 25.0% |
| ! | AGTTTAGTAAATTGTTAGAG+GGG | - | chr5_1:57933084-57933103 | Msa0739580:intron | 25.0% |
| ! | AAACTAATAAATGTCTAGTC+AGG | + | chr5_1:57933232-57933251 | None:intergenic | 25.0% |
| ! | TCTTCAAAAACTCTTTCTTA+AGG | + | chr5_1:57933495-57933514 | None:intergenic | 25.0% |
| ! | TCAATGTTCATAATCATATC+TGG | - | chr5_1:57933680-57933699 | Msa0739580:intron | 25.0% |
| ! | GAAAAACTCTAAATTGTTCA+GGG | + | chr5_1:57933750-57933769 | None:intergenic | 25.0% |
| ! | TGAAAAACTCTAAATTGTTC+AGG | + | chr5_1:57933751-57933770 | None:intergenic | 25.0% |
| ! | TGTAATTAGGTACGAAATTT+AGG | - | chr5_1:57933909-57933928 | Msa0739580:intron | 25.0% |
| !!! | CTACTGATTATTTTAACGTT+AGG | - | chr5_1:57934126-57934145 | Msa0739580:CDS | 25.0% |
| ! | TAAATTATCGCAATCATAGT+AGG | + | chr5_1:57934250-57934269 | None:intergenic | 25.0% |
| !! | ATTTTCCATGTAGTAATTTG+TGG | + | chr5_1:57934560-57934579 | None:intergenic | 25.0% |
| ! | GTAATCTTTAATCTGTAGAA+AGG | - | chr5_1:57934721-57934740 | Msa0739580:five_prime_UTR | 25.0% |
| ! | TGATAAATATGTAGAGTTCA+GGG | + | chr5_1:57934770-57934789 | None:intergenic | 25.0% |
| ! | ACATACTACTCATTTTGCAT+TGG | - | chr5_1:57930146-57930165 | Msa0739580:CDS | 30.0% |
| ! | TCAGAAGAATAGGGATTTTT+GGG | + | chr5_1:57930218-57930237 | None:intergenic | 30.0% |
| !!! | GATTTTTTAGCTTCAATTCC+GGG | - | chr5_1:57930281-57930300 | Msa0739580:CDS | 30.0% |
| TTCATAAACAGTAAAGTGTG+GGG | - | chr5_1:57930336-57930355 | Msa0739580:intron | 30.0% | |
| ! | TTTGAAACTATGTTAGGGTT+TGG | - | chr5_1:57930485-57930504 | Msa0739580:intron | 30.0% |
| TGATGAACATGGAAACTAAT+AGG | - | chr5_1:57930555-57930574 | Msa0739580:intron | 30.0% | |
| AATTCTTGAAAGGAAAAGCA+TGG | + | chr5_1:57931245-57931264 | None:intergenic | 30.0% | |
| !! | TCTCTTTTCTAGGTTTTTAG+GGG | + | chr5_1:57931437-57931456 | None:intergenic | 30.0% |
| !!! | GAATGGTCTATGTGTTTTTT+TGG | - | chr5_1:57931463-57931482 | Msa0739580:intron | 30.0% |
| TTGAACTAGGTTAAAAGGTT+TGG | - | chr5_1:57931685-57931704 | Msa0739580:intron | 30.0% | |
| ATGATAGATTACTTCCTATG+GGG | - | chr5_1:57931710-57931729 | Msa0739580:intron | 30.0% | |
| TGGGGAAATTAAGTAAAATG+AGG | - | chr5_1:57931728-57931747 | Msa0739580:intron | 30.0% | |
| AAATCCATCAAGATTGCATT+GGG | + | chr5_1:57931990-57932009 | None:intergenic | 30.0% | |
| AAAAATGCCTTCAAAACATC+CGG | + | chr5_1:57932013-57932032 | None:intergenic | 30.0% | |
| ATGATATTCACACAAACACT+AGG | + | chr5_1:57932086-57932105 | None:intergenic | 30.0% | |
| GAACCATGTAAATGAAGTTA+AGG | + | chr5_1:57932145-57932164 | None:intergenic | 30.0% | |
| TTAAGGAAAACATACGACAT+AGG | + | chr5_1:57932242-57932261 | None:intergenic | 30.0% | |
| ! | TGTAGTAGTTTAGTTTCTAG+TGG | - | chr5_1:57932339-57932358 | Msa0739580:intron | 30.0% |
| !! | TGCCTTAGTTGATTTTCATA+TGG | - | chr5_1:57932389-57932408 | Msa0739580:intron | 30.0% |
| !! | GCCTTAGTTGATTTTCATAT+GGG | - | chr5_1:57932390-57932409 | Msa0739580:intron | 30.0% |
| ACCCATATGAAAATCAACTA+AGG | + | chr5_1:57932394-57932413 | None:intergenic | 30.0% | |
| TGAAAGTCCCATTTAATGAT+AGG | - | chr5_1:57932519-57932538 | Msa0739580:intron | 30.0% | |
| ! | CATCAATTGACAAAGTCTTT+TGG | - | chr5_1:57932550-57932569 | Msa0739580:intron | 30.0% |
| !!! | ACATGACCCCTTTTTTTTAT+AGG | - | chr5_1:57933053-57933072 | Msa0739580:intron | 30.0% |
| !!! | TGGTGTTGTGTTATTTTGAA+AGG | - | chr5_1:57933343-57933362 | Msa0739580:intron | 30.0% |
| AAAGAATGGAAAGTTACCAA+AGG | - | chr5_1:57933519-57933538 | Msa0739580:CDS | 30.0% | |
| ! | GTCAATGATTTATGCTTTTG+AGG | - | chr5_1:57933995-57934014 | Msa0739580:CDS | 30.0% |
| ! | ATGTAGTGTAAGTATTGCAT+TGG | + | chr5_1:57934038-57934057 | None:intergenic | 30.0% |
| TGATTTCTTAATCAATGCAC+AGG | - | chr5_1:57934059-57934078 | Msa0739580:CDS | 30.0% | |
| GATTTCTTAATCAATGCACA+GGG | - | chr5_1:57934060-57934079 | Msa0739580:CDS | 30.0% | |
| ATTTCTTAATCAATGCACAG+GGG | - | chr5_1:57934061-57934080 | Msa0739580:CDS | 30.0% | |
| TTCGAGATCAAAAACATTAG+AGG | - | chr5_1:57934152-57934171 | Msa0739580:CDS | 30.0% | |
| TTGTGATTTGATGAACATGT+AGG | - | chr5_1:57934408-57934427 | Msa0739580:five_prime_UTR | 30.0% | |
| ! | ATTTGAAGCAGATCAACAAT+TGG | - | chr5_1:57934470-57934489 | Msa0739580:five_prime_UTR | 30.0% |
| ! | TTAATGTGCTAAAGAAGCAT+AGG | + | chr5_1:57934616-57934635 | None:intergenic | 30.0% |
| TAAAATTACCTAGGTTGTGA+AGG | - | chr5_1:57934668-57934687 | Msa0739580:five_prime_UTR | 30.0% | |
| CTGATAAATATGTAGAGTTC+AGG | + | chr5_1:57934771-57934790 | None:intergenic | 30.0% | |
| TGTTGTGTTGTGTTAATTGC+AGG | + | chr5_1:57930015-57930034 | None:intergenic | 35.0% | |
| TGTTTGATGTACACAACAGA+AGG | - | chr5_1:57930107-57930126 | Msa0739580:CDS | 35.0% | |
| ! | CAGAAGAATAGGGATTTTTG+GGG | + | chr5_1:57930217-57930236 | None:intergenic | 35.0% |
| ! | GTCAGAAGAATAGGGATTTT+TGG | + | chr5_1:57930219-57930238 | None:intergenic | 35.0% |
| TTGCAGTGAGATTTCTTCTA+TGG | - | chr5_1:57930517-57930536 | Msa0739580:intron | 35.0% | |
| CACTTGTAGGGATAAAATCA+TGG | - | chr5_1:57930667-57930686 | Msa0739580:intron | 35.0% | |
| !!! | CAAGTTTTCGCTTGTTTTGA+TGG | - | chr5_1:57931000-57931019 | Msa0739580:intron | 35.0% |
| !!! | GTGTGATTTTTTTTGCAGGT+TGG | - | chr5_1:57931028-57931047 | Msa0739580:intron | 35.0% |
| GAAATATTGAATGGCTCTTC+AGG | - | chr5_1:57931100-57931119 | Msa0739580:intron | 35.0% | |
| GGAAGTAGTAGTTCTTGTAT+AGG | - | chr5_1:57931130-57931149 | Msa0739580:intron | 35.0% | |
| ! | AAAAGCATGGCTTCTTTGAA+GGG | + | chr5_1:57931232-57931251 | None:intergenic | 35.0% |
| ATCTTCATGACCATTATCCT+TGG | - | chr5_1:57931327-57931346 | Msa0739580:CDS | 35.0% | |
| TAATTGAACTACTAGAGGTG+TGG | + | chr5_1:57931408-57931427 | None:intergenic | 35.0% | |
| GGTGATAATTGAACTACTAG+AGG | + | chr5_1:57931413-57931432 | None:intergenic | 35.0% | |
| !! | TCTTTTCTAGGTTTTTAGGG+GGG | + | chr5_1:57931435-57931454 | None:intergenic | 35.0% |
| !! | CTCTTTTCTAGGTTTTTAGG+GGG | + | chr5_1:57931436-57931455 | None:intergenic | 35.0% |
| TGTTAACCCTCTAGTTACTA+GGG | - | chr5_1:57931503-57931522 | Msa0739580:intron | 35.0% | |
| GTCATATTATACTTACCTCG+CGG | + | chr5_1:57931555-57931574 | None:intergenic | 35.0% | |
| ATGACCAAGAATTAGTGAGA+TGG | - | chr5_1:57931570-57931589 | Msa0739580:intron | 35.0% | |
| !! | GTGTTTTTAACATGGATCCA+AGG | - | chr5_1:57931659-57931678 | Msa0739580:intron | 35.0% |
| TTAACCTAGTTCAAACACCT+TGG | + | chr5_1:57931679-57931698 | None:intergenic | 35.0% | |
| GGTGTTTGAACTAGGTTAAA+AGG | - | chr5_1:57931680-57931699 | Msa0739580:intron | 35.0% | |
| TGACAACTACGATTGATTGT+TGG | + | chr5_1:57931837-57931856 | None:intergenic | 35.0% | |
| AATTCCCAATGCAATCTTGA+TGG | - | chr5_1:57931983-57932002 | Msa0739580:intron | 35.0% | |
| GAAATCCATCAAGATTGCAT+TGG | + | chr5_1:57931991-57932010 | None:intergenic | 35.0% | |
| !! | ATGCAATCTTGATGGATTTC+CGG | - | chr5_1:57931991-57932010 | Msa0739580:intron | 35.0% |
| GAAAGAAGAACTAACACACA+AGG | + | chr5_1:57932110-57932129 | None:intergenic | 35.0% | |
| !! | AGTAGTTTAGTTTCTAGTGG+TGG | - | chr5_1:57932342-57932361 | Msa0739580:intron | 35.0% |
| ! | AATTGACAAAGTCTTTTGGC+AGG | - | chr5_1:57932554-57932573 | Msa0739580:intron | 35.0% |
| ACATTGAAGGAGATTTAAGG+AGG | + | chr5_1:57933147-57933166 | None:intergenic | 35.0% | |
| CAGTTCATGTAATCATTGTC+CGG | + | chr5_1:57933199-57933218 | None:intergenic | 35.0% | |
| !! | TAGTTCTTCCGTTTGATTTG+TGG | - | chr5_1:57933323-57933342 | Msa0739580:intron | 35.0% |
| ACACAACACCACAAATCAAA+CGG | + | chr5_1:57933334-57933353 | None:intergenic | 35.0% | |
| AACAACCTAGATACTACTCA+AGG | - | chr5_1:57933412-57933431 | Msa0739580:intron | 35.0% | |
| GATGTAGAATAGTTACCGAT+GGG | + | chr5_1:57933597-57933616 | None:intergenic | 35.0% | |
| AGATGTAGAATAGTTACCGA+TGG | + | chr5_1:57933598-57933617 | None:intergenic | 35.0% | |
| TCATATATCAATCATGCCGT+TGG | - | chr5_1:57933627-57933646 | Msa0739580:CDS | 35.0% | |
| TGTGCTATGAAACATTCCAA+CGG | + | chr5_1:57933646-57933665 | None:intergenic | 35.0% | |
| ATATTGTACCTTCACAACCT+AGG | + | chr5_1:57934679-57934698 | None:intergenic | 35.0% | |
| CTTTAATCTGTAGAAAGGTG+AGG | - | chr5_1:57934726-57934745 | Msa0739580:five_prime_UTR | 35.0% | |
| TGTGTTGTGTTAATTGCAGG+TGG | + | chr5_1:57930012-57930031 | None:intergenic | 40.0% | |
| !!! | ATAGGGATTTTTGGGGTTCT+TGG | + | chr5_1:57930210-57930229 | None:intergenic | 40.0% |
| GGGAAAGAGTCAGAAGAATA+GGG | + | chr5_1:57930227-57930246 | None:intergenic | 40.0% | |
| TGGGAAAGAGTCAGAAGAAT+AGG | + | chr5_1:57930228-57930247 | None:intergenic | 40.0% | |
| ! | ATAATTGTCCAGAGTACTCC+CGG | + | chr5_1:57930302-57930321 | None:intergenic | 40.0% |
| GAAACTATGTTAGGGTTTGG+AGG | - | chr5_1:57930488-57930507 | Msa0739580:intron | 40.0% | |
| CCAGAAGAATTGTTACTCAG+AGG | + | chr5_1:57930596-57930615 | None:intergenic | 40.0% | |
| CCTCTGAGTAACAATTCTTC+TGG | - | chr5_1:57930593-57930612 | Msa0739580:intron | 40.0% | |
| !! | TGTTGTTGTTGGTGTTGTTC+TGG | + | chr5_1:57930649-57930668 | None:intergenic | 40.0% |
| ACACCAACAACAACACTTGT+AGG | - | chr5_1:57930654-57930673 | Msa0739580:intron | 40.0% | |
| CACCAACAACAACACTTGTA+GGG | - | chr5_1:57930655-57930674 | Msa0739580:intron | 40.0% | |
| ! | ATCCCTACAAGTGTTGTTGT+TGG | + | chr5_1:57930660-57930679 | None:intergenic | 40.0% |
| CTTCAAGCAATTGAGGTAAG+AGG | + | chr5_1:57930720-57930739 | None:intergenic | 40.0% | |
| CTCTTACCTCAATTGCTTGA+AGG | - | chr5_1:57930718-57930737 | Msa0739580:intron | 40.0% | |
| ! | TGTGTGAGAGTTTGAAGTTC+AGG | + | chr5_1:57930745-57930764 | None:intergenic | 40.0% |
| TATTGAATGGCTCTTCAGGA+AGG | - | chr5_1:57931104-57931123 | Msa0739580:intron | 40.0% | |
| TCTTGTATAGGTGAAGATCC+AGG | - | chr5_1:57931142-57931161 | Msa0739580:CDS | 40.0% | |
| TATAGGTGAAGATCCAGGTT+TGG | - | chr5_1:57931147-57931166 | Msa0739580:CDS | 40.0% | |
| ! | GAAAAGCATGGCTTCTTTGA+AGG | + | chr5_1:57931233-57931252 | None:intergenic | 40.0% |
| GCTGAGACTCAATTCTTGAA+AGG | + | chr5_1:57931255-57931274 | None:intergenic | 40.0% | |
| AAGAATTGAGTCTCAGCTCA+AGG | - | chr5_1:57931258-57931277 | Msa0739580:CDS | 40.0% | |
| !! | GTTGCTGTTTCAACTGACTT+TGG | - | chr5_1:57931283-57931302 | Msa0739580:CDS | 40.0% |
| !! | CTTTTCTAGGTTTTTAGGGG+GGG | + | chr5_1:57931434-57931453 | None:intergenic | 40.0% |
| GTGTTAACCCTCTAGTTACT+AGG | - | chr5_1:57931502-57931521 | Msa0739580:intron | 40.0% | |
| !! | TGGATTTCCGGATGTTTTGA+AGG | - | chr5_1:57932003-57932022 | Msa0739580:intron | 40.0% |
| TTTCCTTTCATGTGTGACCT+TGG | - | chr5_1:57932036-57932055 | Msa0739580:intron | 40.0% | |
| TAACCAAGGTCACACATGAA+AGG | + | chr5_1:57932042-57932061 | None:intergenic | 40.0% | |
| !! | AGTTTAGTTTCTAGTGGTGG+AGG | - | chr5_1:57932345-57932364 | Msa0739580:intron | 40.0% |
| GGGACTTTCAACTTCTTTAG+TGG | + | chr5_1:57932509-57932528 | None:intergenic | 40.0% | |
| AAGCATTCCTCACACTAATG+TGG | - | chr5_1:57932891-57932910 | Msa0739580:intron | 40.0% | |
| AGCATTCCTCACACTAATGT+GGG | - | chr5_1:57932892-57932911 | Msa0739580:intron | 40.0% | |
| AGTAAATTGTTAGAGGGGAG+AGG | - | chr5_1:57933089-57933108 | Msa0739580:intron | 40.0% | |
| GTAAATTGTTAGAGGGGAGA+GGG | - | chr5_1:57933090-57933109 | Msa0739580:intron | 40.0% | |
| TAGTTTCCGAGGATCAAACT+CGG | - | chr5_1:57933119-57933138 | Msa0739580:intron | 40.0% | |
| GGGACATTGAAGGAGATTTA+AGG | + | chr5_1:57933150-57933169 | None:intergenic | 40.0% | |
| CTTCACCTTGAGTAGTATCT+AGG | + | chr5_1:57933420-57933439 | None:intergenic | 40.0% | |
| TACTACTCAAGGTGAAGATC+AGG | - | chr5_1:57933423-57933442 | Msa0739580:intron | 40.0% | |
| !! | CGCAAGTATAGTGGATATCT+AGG | - | chr5_1:57933466-57933485 | Msa0739580:CDS | 40.0% |
| ! | TTACAAATGGCCTTACCCAT+CGG | - | chr5_1:57933579-57933598 | Msa0739580:intron | 40.0% |
| AGAATAGTTACCGATGGGTA+AGG | + | chr5_1:57933592-57933611 | None:intergenic | 40.0% | |
| !! | TTCTGCAAGTGCTTGCTTTT+GGG | + | chr5_1:57934437-57934456 | None:intergenic | 40.0% |
| ! | ATTCTGCAAGTGCTTGCTTT+TGG | + | chr5_1:57934438-57934457 | None:intergenic | 40.0% |
| TTAATCAGAGAAAACGCCAC+TGG | - | chr5_1:57934497-57934516 | Msa0739580:five_prime_UTR | 40.0% | |
| GCAAATTGCATATCCTCAGA+AGG | + | chr5_1:57934526-57934545 | None:intergenic | 40.0% | |
| !! | GGATATGCAATTTGCTGTGA+TGG | - | chr5_1:57934531-57934550 | Msa0739580:five_prime_UTR | 40.0% |
| GGATGCCACAAATTACTACA+TGG | - | chr5_1:57934552-57934571 | Msa0739580:five_prime_UTR | 40.0% | |
| ATGAATCTCACTGCCCTTCT+TGG | + | chr5_1:57929909-57929928 | None:intergenic | 45.0% | |
| GTGTGGGGACTAAGCAAAAT+AGG | - | chr5_1:57930351-57930370 | Msa0739580:intron | 45.0% | |
| TCAGGACCTTCAAGCAATTG+AGG | + | chr5_1:57930727-57930746 | None:intergenic | 45.0% | |
| TCCAGGTTTGGATCAGTTCA+TGG | - | chr5_1:57931159-57931178 | Msa0739580:CDS | 45.0% | |
| TCCATGAACTGATCCAAACC+TGG | + | chr5_1:57931163-57931182 | None:intergenic | 45.0% | |
| AGGTTTGGATCAGTTCATGG+AGG | - | chr5_1:57931162-57931181 | Msa0739580:CDS | 45.0% | |
| AGGGCCATCTCACTAATTCT+TGG | + | chr5_1:57931577-57931596 | None:intergenic | 45.0% | |
| ! | GGATCCAAGGTGTTTGAACT+AGG | - | chr5_1:57931672-57931691 | Msa0739580:intron | 45.0% |
| CGACATAGGATGACAAGACA+TGG | + | chr5_1:57932228-57932247 | None:intergenic | 45.0% | |
| TTCACAACTTGGGGGATGAT+TGG | - | chr5_1:57932718-57932737 | Msa0739580:intron | 45.0% | |
| TTGTGTCCCACATTAGTGTG+AGG | + | chr5_1:57932901-57932920 | None:intergenic | 45.0% | |
| ! | GAGGGAAATGTTAGTTTCCG+AGG | - | chr5_1:57933108-57933127 | Msa0739580:intron | 45.0% |
| ATGTAATCATTGTCCGGCGT+AGG | + | chr5_1:57933193-57933212 | None:intergenic | 45.0% | |
| CAGCTTCTACGCAAGTATAG+TGG | - | chr5_1:57933457-57933476 | Msa0739580:CDS | 45.0% | |
| CTCGACAGCAACTACTTGAT+TGG | - | chr5_1:57933545-57933564 | Msa0739580:CDS | 45.0% | |
| GACAGCAACTACTTGATTGG+TGG | - | chr5_1:57933548-57933567 | Msa0739580:CDS | 45.0% | |
| AACTACTTGATTGGTGGAGC+AGG | - | chr5_1:57933554-57933573 | Msa0739580:intron | 45.0% | |
| ! | TAATCAATGCACAGGGGCAT+CGG | - | chr5_1:57934067-57934086 | Msa0739580:CDS | 45.0% |
| AAGCACTTGCAGAATCCACA+GGG | - | chr5_1:57934443-57934462 | Msa0739580:five_prime_UTR | 45.0% | |
| GATGTGCAAGCCATTTCCTA+TGG | - | chr5_1:57934582-57934601 | Msa0739580:five_prime_UTR | 45.0% | |
| GGCATAGCATCCATAGGAAA+TGG | + | chr5_1:57934595-57934614 | None:intergenic | 45.0% | |
| AGCATAGGCATAGCATCCAT+AGG | + | chr5_1:57934601-57934620 | None:intergenic | 45.0% | |
| !! | AGGGTTTTGCATGAGTTGAG+AGG | + | chr5_1:57934640-57934659 | None:intergenic | 45.0% |
| TGTAGAGTTCAGGGATAGTG+TGG | + | chr5_1:57934761-57934780 | None:intergenic | 45.0% | |
| !!! | AATAGTTTTTTTTTTTTTTA+AGG | + | chr5_1:57932462-57932481 | None:intergenic | 5.0% |
| !!! | ATAGTTTTTTTTTTTTTTTA+AGG | + | chr5_1:57933866-57933885 | None:intergenic | 5.0% |
| !! | CTTCAATTCCGGGAGTACTC+TGG | - | chr5_1:57930291-57930310 | Msa0739580:intron | 50.0% |
| GACAAGAGACGAGGAAAGAG+AGG | + | chr5_1:57930698-57930717 | None:intergenic | 50.0% | |
| AGGTAAGAGGACAAGAGACG+AGG | + | chr5_1:57930707-57930726 | None:intergenic | 50.0% | |
| TCTAAGCTAGCCACCACTTC+AGG | + | chr5_1:57931061-57931080 | None:intergenic | 50.0% | |
| !! | TGAAGTGGTGGCTAGCTTAG+AGG | - | chr5_1:57931060-57931079 | Msa0739580:intron | 50.0% |
| AATGGCTCTTCAGGAAGGAC+AGG | - | chr5_1:57931109-57931128 | Msa0739580:intron | 50.0% | |
| AACCCTCTAGTTACTAGGGC+AGG | - | chr5_1:57931507-57931526 | Msa0739580:intron | 50.0% | |
| ACCCTCTAGTTACTAGGGCA+GGG | - | chr5_1:57931508-57931527 | Msa0739580:intron | 50.0% | |
| !! | TAGTTTCTAGTGGTGGAGGC+AGG | - | chr5_1:57932349-57932368 | Msa0739580:intron | 50.0% |
| !! | AGTTTCTAGTGGTGGAGGCA+GGG | - | chr5_1:57932350-57932369 | Msa0739580:intron | 50.0% |
| TTGGGGGATGATTGGCAATG+TGG | - | chr5_1:57932726-57932745 | Msa0739580:intron | 50.0% | |
| TGGGGGATGATTGGCAATGT+GGG | - | chr5_1:57932727-57932746 | Msa0739580:intron | 50.0% | |
| AATGTGGGACACGAGTGGAT+TGG | - | chr5_1:57932742-57932761 | Msa0739580:intron | 50.0% | |
| GAGGTTCCGAGTTTGATCCT+CGG | + | chr5_1:57933128-57933147 | None:intergenic | 50.0% | |
| GGTGAGCTAAGGGACATTGA+AGG | + | chr5_1:57933160-57933179 | None:intergenic | 50.0% | |
| !! | TAGCTCGGTTGGTGAGCTAA+GGG | + | chr5_1:57933170-57933189 | None:intergenic | 50.0% |
| AGTTGCTGTCGAGCTTCCTT+TGG | + | chr5_1:57933538-57933557 | None:intergenic | 50.0% | |
| GGTGGAGCAGGCATTACAAA+TGG | - | chr5_1:57933566-57933585 | Msa0739580:intron | 50.0% | |
| CAAGCACTTGCAGAATCCAC+AGG | - | chr5_1:57934442-57934461 | Msa0739580:five_prime_UTR | 50.0% | |
| CTGCTTCAAATCTAGCCCTG+TGG | + | chr5_1:57934461-57934480 | None:intergenic | 50.0% | |
| TATCCTCAGAAGGCTTCCAG+TGG | + | chr5_1:57934516-57934535 | None:intergenic | 50.0% | |
| TGCAGGTGGAGACAGAGAGA+GGG | + | chr5_1:57929998-57930017 | None:intergenic | 55.0% | |
| TTGCAGGTGGAGACAGAGAG+AGG | + | chr5_1:57929999-57930018 | None:intergenic | 55.0% | |
| AAGCTAGCCACCACTTCAGG+AGG | + | chr5_1:57931058-57931077 | None:intergenic | 55.0% | |
| CCCCTGCCCTAGTAACTAGA+GGG | + | chr5_1:57931512-57931531 | None:intergenic | 55.0% | |
| CCCTCTAGTTACTAGGGCAG+GGG | - | chr5_1:57931509-57931528 | Msa0739580:intron | 55.0% | |
| CGGCCAACTCTGGATTACCA+GGG | + | chr5_1:57931535-57931554 | None:intergenic | 55.0% | |
| !! | GTTTCTAGTGGTGGAGGCAG+GGG | - | chr5_1:57932351-57932370 | Msa0739580:intron | 55.0% |
| TTGGCAATGTGGGACACGAG+TGG | - | chr5_1:57932737-57932756 | Msa0739580:intron | 55.0% | |
| !! | GTAGCTCGGTTGGTGAGCTA+AGG | + | chr5_1:57933171-57933190 | None:intergenic | 55.0% |
| ATTGTCCGGCGTAGGTAGCT+CGG | + | chr5_1:57933185-57933204 | None:intergenic | 55.0% | |
| ! | GGTTGGAGCACCTCCTGAAG+TGG | - | chr5_1:57931045-57931064 | Msa0739580:intron | 60.0% |
| ! | TGGAGCACCTCCTGAAGTGG+TGG | - | chr5_1:57931048-57931067 | Msa0739580:intron | 60.0% |
| GCCCCTGCCCTAGTAACTAG+AGG | + | chr5_1:57931513-57931532 | None:intergenic | 60.0% | |
| GGGCCCTGGTAATCCAGAGT+TGG | - | chr5_1:57931529-57931548 | Msa0739580:intron | 60.0% | |
| GCGGCCAACTCTGGATTACC+AGG | + | chr5_1:57931536-57931555 | None:intergenic | 60.0% | |
| GTAATCCAGAGTTGGCCGCG+AGG | - | chr5_1:57931537-57931556 | Msa0739580:intron | 60.0% | |
| ACTTACCTCGCGGCCAACTC+TGG | + | chr5_1:57931545-57931564 | None:intergenic | 60.0% | |
| ACCAACCGAGCTACCTACGC+CGG | - | chr5_1:57933177-57933196 | Msa0739580:intron | 60.0% | |
| ACGCCACTGGAAGCCTTCTG+AGG | - | chr5_1:57934510-57934529 | Msa0739580:five_prime_UTR | 60.0% | |
| AGTTACTAGGGCAGGGGCCC+TGG | - | chr5_1:57931515-57931534 | Msa0739580:intron | 65.0% | |
| TCCGGCGTAGGTAGCTCGGT+TGG | + | chr5_1:57933181-57933200 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 57929894 | 57934839 | 57929894 | ID=Msa0739580;Name=Msa0739580 |
| chr5_1 | mRNA | 57929894 | 57934839 | 57929894 | ID=Msa0739580-mRNA-1;Parent=Msa0739580;Name=Msa0739580-mRNA-1;_AED=0.02;_eAED=0.02;_QI=514|0.8|0.66|1|0.6|0.33|6|212|294 |
| chr5_1 | exon | 57929894 | 57930303 | 57929894 | ID=Msa0739580-mRNA-1:exon:16500;Parent=Msa0739580-mRNA-1 |
| chr5_1 | exon | 57931133 | 57931368 | 57931133 | ID=Msa0739580-mRNA-1:exon:16499;Parent=Msa0739580-mRNA-1 |
| chr5_1 | exon | 57933429 | 57933569 | 57933429 | ID=Msa0739580-mRNA-1:exon:16498;Parent=Msa0739580-mRNA-1 |
| chr5_1 | exon | 57933582 | 57933687 | 57933582 | ID=Msa0739580-mRNA-1:exon:16497;Parent=Msa0739580-mRNA-1 |
| chr5_1 | exon | 57933994 | 57934232 | 57933994 | ID=Msa0739580-mRNA-1:exon:16496;Parent=Msa0739580-mRNA-1 |
| chr5_1 | exon | 57934361 | 57934839 | 57934361 | ID=Msa0739580-mRNA-1:exon:16495;Parent=Msa0739580-mRNA-1 |
| chr5_1 | five_prime_UTR | 57934361 | 57934839 | 57934361 | ID=Msa0739580-mRNA-1:five_prime_utr;Parent=Msa0739580-mRNA-1 |
| chr5_1 | five_prime_UTR | 57934198 | 57934232 | 57934198 | ID=Msa0739580-mRNA-1:five_prime_utr;Parent=Msa0739580-mRNA-1 |
| chr5_1 | CDS | 57933994 | 57934197 | 57933994 | ID=Msa0739580-mRNA-1:cds;Parent=Msa0739580-mRNA-1 |
| chr5_1 | CDS | 57933582 | 57933687 | 57933582 | ID=Msa0739580-mRNA-1:cds;Parent=Msa0739580-mRNA-1 |
| chr5_1 | CDS | 57933429 | 57933569 | 57933429 | ID=Msa0739580-mRNA-1:cds;Parent=Msa0739580-mRNA-1 |
| chr5_1 | CDS | 57931133 | 57931368 | 57931133 | ID=Msa0739580-mRNA-1:cds;Parent=Msa0739580-mRNA-1 |
| chr5_1 | CDS | 57930106 | 57930303 | 57930106 | ID=Msa0739580-mRNA-1:cds;Parent=Msa0739580-mRNA-1 |
| chr5_1 | three_prime_UTR | 57929894 | 57930105 | 57929894 | ID=Msa0739580-mRNA-1:three_prime_utr;Parent=Msa0739580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
