Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0689730 | XP_003612000.1 | 96.978 | 1059 | 17 | 4 | 1 | 1055 | 1 | 1048 | 0.0 | 2098 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0689730 | sp|Q8R5K4|NOL6_MOUSE | 29.479 | 1055 | 644 | 28 | 4 | 1010 | 93 | 1095 | 4.81e-129 | 424 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0689730 | G7KDK7 | 96.978 | 1059 | 17 | 4 | 1 | 1055 | 1 | 1048 | 0.0 | 2098 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0030200 | Msa0689730 | 0.801016 | 1.098656e-48 | -8.615850e-47 |
Msa0032430 | Msa0689730 | 0.808257 | 3.385074e-50 | -8.615850e-47 |
Msa0054480 | Msa0689730 | 0.801241 | 9.879992e-49 | -8.615850e-47 |
Msa0070700 | Msa0689730 | 0.832051 | 1.178388e-55 | -8.615850e-47 |
Msa0118590 | Msa0689730 | 0.837042 | 6.563336e-57 | -8.615850e-47 |
Msa0689260 | Msa0689730 | 0.809313 | 2.012722e-50 | -8.615850e-47 |
Msa0689730 | Msa0716830 | 0.934069 | 7.138190e-96 | -8.615850e-47 |
Msa0689730 | Msa0757830 | 0.812914 | 3.335177e-51 | -8.615850e-47 |
Msa0689730 | Msa1333010 | 0.804033 | 2.622941e-49 | -8.615850e-47 |
Msa0689730 | Msa1358250 | 0.811790 | 5.868833e-51 | -8.615850e-47 |
Msa0689730 | Msa1420210 | 0.982065 | 3.831739e-154 | -8.615850e-47 |
Msa0144370 | Msa0689730 | 0.835264 | 1.856557e-56 | -8.615850e-47 |
Msa0170200 | Msa0689730 | 0.806298 | 8.804992e-50 | -8.615850e-47 |
Msa0172070 | Msa0689730 | 0.804407 | 2.192143e-49 | -8.615850e-47 |
Msa0402650 | Msa0689730 | 0.812795 | 3.541243e-51 | -8.615850e-47 |
Msa0449210 | Msa0689730 | 0.820012 | 8.587383e-53 | -8.615850e-47 |
Msa0532070 | Msa0689730 | 0.801058 | 1.076738e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0689730 | MtrunA17_Chr5g0404121 | 96.978 | 1059 | 17 | 4 | 1 | 1055 | 1 | 1048 | 0.0 | 2098 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0689730 | AT1G63810.2 | 60.377 | 1060 | 399 | 9 | 2 | 1054 | 8 | 1053 | 0.0 | 1331 |
Msa0689730 | AT1G63810.1 | 60.377 | 1060 | 399 | 9 | 2 | 1054 | 8 | 1053 | 0.0 | 1331 |
Find 276 sgRNAs with CRISPR-Local
Find 630 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTTACAGAATAAACTTTA+AGG | 0.136067 | 4_4:+56955567 | Msa0689730:intron |
CTCTTGAATTTCGGAAGTTT+TGG | 0.182977 | 4_4:+56956056 | Msa0689730:CDS |
TGCTAGGCCTGAATTAAATT+TGG | 0.185499 | 4_4:+56951705 | Msa0689730:CDS |
TCCATTGAATCCATTGAAAA+AGG | 0.192829 | 4_4:-56951445 | None:intergenic |
CTAAAGAATCATGCCATAAT+TGG | 0.204880 | 4_4:-56959768 | None:intergenic |
ATTGCATCATAGTTATTTAA+AGG | 0.206584 | 4_4:-56958940 | None:intergenic |
AAAGTATAATTCTAGTATTT+TGG | 0.215152 | 4_4:+56953862 | Msa0689730:CDS |
TTTCCACCAAATTCCAATTA+TGG | 0.217606 | 4_4:+56959755 | Msa0689730:CDS |
GTTGATGAAACTCACATTTC+AGG | 0.219849 | 4_4:+56958772 | Msa0689730:CDS |
AGAGGAGGCCATTGAGCTTT+TGG | 0.235529 | 4_4:+56957632 | Msa0689730:CDS |
CTATAATGTTACTGCTGATT+TGG | 0.240150 | 4_4:+56951582 | Msa0689730:CDS |
ATCATGCCATAATTGGAATT+TGG | 0.241537 | 4_4:-56959761 | None:intergenic |
CTCTTTACAGCTGGAAGGTT+CGG | 0.248790 | 4_4:+56956992 | Msa0689730:intron |
GCAGTAACATTATAGTTATC+AGG | 0.253077 | 4_4:-56951574 | None:intergenic |
CTAACTATTGGTCCATATAT+TGG | 0.253210 | 4_4:-56957479 | None:intergenic |
CAAATCTTTAGGCAACAAAA+AGG | 0.253875 | 4_4:-56959543 | None:intergenic |
CAATTATGGCATGATTCTTT+AGG | 0.254065 | 4_4:+56959769 | Msa0689730:CDS |
CAAAATTTATTCGAGTAATA+TGG | 0.257083 | 4_4:+56955695 | Msa0689730:CDS |
TCTAGTTACCTTATTCAAAT+AGG | 0.261971 | 4_4:+56957056 | Msa0689730:CDS |
GGATCAACTTGATTTCTCTT+TGG | 0.264364 | 4_4:+56956360 | Msa0689730:CDS |
CAGGACAGAATGCAACTTAA+AGG | 0.272055 | 4_4:+56954927 | Msa0689730:intron |
ATCATTAACAGGAACTTAAA+AGG | 0.273761 | 4_4:+56958717 | Msa0689730:intron |
ACCTTATTCAAATAGGAAAA+AGG | 0.279233 | 4_4:+56957063 | Msa0689730:CDS |
ACCACTAGAAATTATGATTC+AGG | 0.279774 | 4_4:+56956895 | Msa0689730:CDS |
AGAAATCTCCATCTATTGAT+AGG | 0.292609 | 4_4:+56952816 | Msa0689730:CDS |
TCTTTACAGCTGGAAGGTTC+GGG | 0.294108 | 4_4:+56956993 | Msa0689730:intron |
GTGATTTGGAGAAAGCATTT+AGG | 0.296603 | 4_4:+56955896 | Msa0689730:CDS |
CGCATTACCTTGAACTTCAT+TGG | 0.302825 | 4_4:+56954197 | Msa0689730:CDS |
AGCTGGAAGGTTCGGGGCAC+TGG | 0.306980 | 4_4:+56957000 | Msa0689730:intron |
CAACATGCTAGCATGATTAA+TGG | 0.310323 | 4_4:+56957440 | Msa0689730:CDS |
CGCGAGCAGGGAGCATTAAA+TGG | 0.312494 | 4_4:-56957681 | None:intergenic |
GATTACCATTTACAGCATTC+AGG | 0.313847 | 4_4:+56956780 | Msa0689730:intron |
AGGAATTTCAGTCAGTGATT+TGG | 0.322508 | 4_4:+56955882 | Msa0689730:CDS |
GTGCTTTATCAAAGATTTAG+AGG | 0.327391 | 4_4:+56959625 | Msa0689730:CDS |
CTCACATTTCAGGAGGAAAT+TGG | 0.329536 | 4_4:+56958782 | Msa0689730:CDS |
CAAAGTCGTTACCCAATATA+TGG | 0.332233 | 4_4:+56957467 | Msa0689730:CDS |
ATAAGATCCAAATTTAATTC+AGG | 0.334252 | 4_4:-56951712 | None:intergenic |
TGATTGGACTTATTCTCCTT+TGG | 0.337140 | 4_4:+56958019 | Msa0689730:CDS |
CAAACTGATGTATTTGTGTT+AGG | 0.338293 | 4_4:-56960433 | None:intergenic |
AGAGGCTTTAATCCTACTTA+AGG | 0.343039 | 4_4:+56953949 | Msa0689730:CDS |
TTAAACGCTCACCTAACTAT+TGG | 0.344725 | 4_4:-56957491 | None:intergenic |
TCAAGCAGGCTCTTGAATTT+CGG | 0.348380 | 4_4:+56956047 | Msa0689730:intron |
GATAAAGAGCCCTTGTTCAT+AGG | 0.350370 | 4_4:+56955862 | Msa0689730:CDS |
CTTGATTTCTCTTTGGCTCA+TGG | 0.352968 | 4_4:+56956367 | Msa0689730:CDS |
TATTGAAGGCCTCCCTTTGA+AGG | 0.354251 | 4_4:+56956548 | Msa0689730:CDS |
GAAACCATTGATTATTCAAA+AGG | 0.354300 | 4_4:+56951657 | Msa0689730:CDS |
TACTGGCACACCTTGCTTCT+AGG | 0.357704 | 4_4:+56954135 | Msa0689730:CDS |
GAAGAATTGCGCGGCTGAAC+TGG | 0.363898 | 4_4:-56951304 | None:intergenic |
GCAAAGCTTGTTGATGTTGA+TGG | 0.365371 | 4_4:+56953635 | Msa0689730:CDS |
TCTTACAGAATAAACTTTAA+GGG | 0.366114 | 4_4:+56955568 | Msa0689730:intron |
TCTTTGATAAAGCACCTTGA+TGG | 0.369158 | 4_4:-56959617 | None:intergenic |
AACATTCATAATTCAAAGAA+TGG | 0.374061 | 4_4:+56953728 | Msa0689730:CDS |
TTAGCTAGAAGATGAGGTTC+AGG | 0.374662 | 4_4:-56956821 | None:intergenic |
ACATCTATTCTCTGCTTGTT+TGG | 0.375595 | 4_4:+56957608 | Msa0689730:CDS |
GAAAACTGAACTTAGGTCTA+TGG | 0.376101 | 4_4:-56951242 | None:intergenic |
CTTTAATTTGCGAGCCTTGG+TGG | 0.377383 | 4_4:-56960084 | None:intergenic |
GCTTTCGAGCTTCGTTCTGC+AGG | 0.383049 | 4_4:-56952853 | None:intergenic |
TAGTATGGGAATGTCAGAAA+TGG | 0.383085 | 4_4:+56956251 | Msa0689730:intron |
GGAGACGGAGGCAGTCGGTT+AGG | 0.384165 | 4_4:-56951338 | None:intergenic |
TAACTATTGGTCCATATATT+GGG | 0.384799 | 4_4:-56957478 | None:intergenic |
ATATTTCCTTCGCCTTCCTT+TGG | 0.385238 | 4_4:-56954515 | None:intergenic |
GTGTAGAGGTGGTGGATTTG+AGG | 0.391006 | 4_4:+56955166 | Msa0689730:CDS |
CTTCTAGGCAACAAATTAGT+AGG | 0.395356 | 4_4:+56954150 | Msa0689730:CDS |
CCTCTCCCACCTTCAGAGTT+CGG | 0.395834 | 4_4:+56960255 | Msa0689730:three_prime_UTR |
TATGTTCATGATTGCCTGAA+TGG | 0.401910 | 4_4:+56954095 | Msa0689730:CDS |
AAGCGTTTGCGTCTTATTGA+AGG | 0.404458 | 4_4:+56956534 | Msa0689730:CDS |
GCACAAGAGTTTGTGTAGAT+TGG | 0.407097 | 4_4:+56960218 | Msa0689730:three_prime_UTR |
GTCTTTAAATCTTCTAAGCT+CGG | 0.409788 | 4_4:-56956089 | None:intergenic |
TTTAACAGCATAGTCAATCT+TGG | 0.412420 | 4_4:-56955201 | None:intergenic |
GCTCCCTGCTCGCGGATCAC+CGG | 0.412876 | 4_4:+56957690 | Msa0689730:CDS |
CATTACAATATATAAGAATC+TGG | 0.412886 | 4_4:-56960301 | None:intergenic |
TACATTCTTTGAGTAAACTA+AGG | 0.416276 | 4_4:-56957272 | None:intergenic |
TTAAATATGATTATTGTATG+AGG | 0.416890 | 4_4:+56955219 | Msa0689730:CDS |
TCTTCTTTACTTTCAGCATT+CGG | 0.417000 | 4_4:-56955934 | None:intergenic |
GCATTTAGGATGGTTGATAT+TGG | 0.417330 | 4_4:+56955910 | Msa0689730:CDS |
TCAATTGCAATTTCATCCAT+TGG | 0.417715 | 4_4:-56957023 | None:intergenic |
CGACTTTAATTTGCGAGCCT+TGG | 0.420314 | 4_4:-56960087 | None:intergenic |
ATTCTCTGCTTGTTTGGTAG+AGG | 0.420325 | 4_4:+56957614 | Msa0689730:CDS |
GGATTTCGTCGATGGAAGAT+TGG | 0.421013 | 4_4:-56951552 | None:intergenic |
AACAAGGAGCTATATGCATC+AGG | 0.422250 | 4_4:+56955592 | Msa0689730:CDS |
CGCGGATCACCGGGTTTATG+AGG | 0.428082 | 4_4:+56957700 | Msa0689730:CDS |
CTCCCTGCTCGCGGATCACC+GGG | 0.429436 | 4_4:+56957691 | Msa0689730:CDS |
AATGGATTCAATGGAGTTCA+AGG | 0.431678 | 4_4:+56951453 | Msa0689730:exon |
CAATATATGGACCAATAGTT+AGG | 0.435471 | 4_4:+56957480 | Msa0689730:CDS |
TTTGTTGCCTAAAGATTTGA+AGG | 0.436842 | 4_4:+56959547 | Msa0689730:CDS |
CGCCTACCCTTCAAATCTTT+AGG | 0.441459 | 4_4:-56959554 | None:intergenic |
CAATTTACCTCCCATCTGTA+TGG | 0.442153 | 4_4:-56958806 | None:intergenic |
CTCTGCTTGTTTGGTAGAGG+AGG | 0.442844 | 4_4:+56957617 | Msa0689730:CDS |
CACAAACTCTTGTGCTCTAC+CGG | 0.443543 | 4_4:-56960210 | None:intergenic |
TCAAATATCAAACCTTAAGT+AGG | 0.448165 | 4_4:-56953961 | None:intergenic |
GATGGATGACACATGACAAC+TGG | 0.448791 | 4_4:-56954957 | None:intergenic |
CTAAAAGCTGTAGGTGAAGT+TGG | 0.449085 | 4_4:+56960027 | Msa0689730:CDS |
AGTATGGGAATGTCAGAAAT+GGG | 0.450581 | 4_4:+56956252 | Msa0689730:intron |
TGTAGGGCCAGTGATGTTCT+TGG | 0.450632 | 4_4:+56958301 | Msa0689730:CDS |
ACAAAAGAAGGTTAGAGATC+TGG | 0.451208 | 4_4:-56954550 | None:intergenic |
CATTCAACCCTATCAATAGA+TGG | 0.457280 | 4_4:-56952824 | None:intergenic |
AGGTTCGGGGCACTGGCCAA+TGG | 0.459859 | 4_4:+56957007 | Msa0689730:CDS |
GTGTGACTGGAGTGACAGTA+TGG | 0.460004 | 4_4:-56951375 | None:intergenic |
GCAGTCGGTTAGGGTGTAAC+CGG | 0.460938 | 4_4:-56951328 | None:intergenic |
AAAATACTAGAATTATACTT+TGG | 0.461888 | 4_4:-56953860 | None:intergenic |
CATCTATTGATAGGGTTGAA+TGG | 0.464021 | 4_4:+56952825 | Msa0689730:CDS |
TAACCGACTGCCTCCGTCTC+CGG | 0.464590 | 4_4:+56951340 | Msa0689730:five_prime_UTR |
GTGATGAAAGTGTGTGTGAC+TGG | 0.465258 | 4_4:-56951388 | None:intergenic |
TCTTTGGCTCATGGTGCTGT+AGG | 0.468769 | 4_4:+56956376 | Msa0689730:CDS |
GAGACGGAGGCAGTCGGTTA+GGG | 0.473817 | 4_4:-56951337 | None:intergenic |
AGAAGGATTATTTGAACTAC+AGG | 0.474516 | 4_4:+56952744 | Msa0689730:CDS |
AAAGCATCTGAGGCCTGGAC+TGG | 0.476348 | 4_4:+56958338 | Msa0689730:CDS |
AAACCATTGATTATTCAAAA+GGG | 0.477504 | 4_4:+56951658 | Msa0689730:CDS |
ATGATAAAGCATCTGAGGCC+TGG | 0.480277 | 4_4:+56958333 | Msa0689730:CDS |
GTTGTCATGTGTCATCCATC+GGG | 0.480677 | 4_4:+56954960 | Msa0689730:CDS |
AGTTGTCATGTGTCATCCAT+CGG | 0.482754 | 4_4:+56954959 | Msa0689730:CDS |
AGCGTATGGTGGCGGAAGAA+TGG | 0.486008 | 4_4:-56951280 | None:intergenic |
AGTTGCTCTCAAACTATGAT+TGG | 0.487450 | 4_4:+56958003 | Msa0689730:CDS |
TCTGGGCTGCCGAACTCTGA+AGG | 0.488416 | 4_4:-56960264 | None:intergenic |
GCGGCAATGGCGTCATCCAC+AGG | 0.489625 | 4_4:-56951526 | None:intergenic |
ATACATACCAATGAAGTTCA+AGG | 0.491806 | 4_4:-56954204 | None:intergenic |
ATGCCATAATTGGAATTTGG+TGG | 0.493716 | 4_4:-56959758 | None:intergenic |
GTCTAGACTAGCAAAACGTT+GGG | 0.494019 | 4_4:+56957578 | Msa0689730:intron |
GGAAAATATTGTAGTAGTTG+TGG | 0.494405 | 4_4:+56956339 | Msa0689730:CDS |
CTGTAGGTGAAGTTGGAAAA+GGG | 0.494994 | 4_4:+56960034 | Msa0689730:CDS |
CTTCTCTTCTCATCAGAAGT+TGG | 0.496325 | 4_4:+56959003 | Msa0689730:CDS |
GCTGTAGGTGAAGTTGGAAA+AGG | 0.496760 | 4_4:+56960033 | Msa0689730:CDS |
CCGAACTCTGAAGGTGGGAG+AGG | 0.497282 | 4_4:-56960255 | None:intergenic |
AGTATGGGCGGCAGCGTCAC+CGG | 0.498193 | 4_4:-56951359 | None:intergenic |
TATTTAAAGGAGTTCGCAAA+AGG | 0.498991 | 4_4:-56958927 | None:intergenic |
GTTCTCTCTTTACAGCTGGA+AGG | 0.500279 | 4_4:+56956987 | Msa0689730:intron |
CGGTATGCTAAAGATATCCT+TGG | 0.500426 | 4_4:-56953684 | None:intergenic |
GAGGTGTCTTTATCTCTGCT+TGG | 0.501019 | 4_4:+56952778 | Msa0689730:CDS |
GGATATTGGTGCTGATAAAG+TGG | 0.501474 | 4_4:+56951621 | Msa0689730:CDS |
AGGACAGAATGCAACTTAAA+GGG | 0.502070 | 4_4:+56954928 | Msa0689730:intron |
ACAAATTAGTAGGTCAATGA+AGG | 0.503786 | 4_4:+56954160 | Msa0689730:CDS |
AGGAAATTGGTCCATACAGA+TGG | 0.506007 | 4_4:+56958795 | Msa0689730:CDS |
TTACAAAGGTAGACAAAAGA+AGG | 0.507935 | 4_4:-56954562 | None:intergenic |
CGAAGGAAATATTACTAAAG+AGG | 0.509950 | 4_4:+56954526 | Msa0689730:CDS |
GTTATCAGGGATTTCGTCGA+TGG | 0.510390 | 4_4:-56951560 | None:intergenic |
CACAAATTGTATACCTTGGA+AGG | 0.511785 | 4_4:-56959829 | None:intergenic |
TTTGTATGGATGATGAATGC+TGG | 0.512757 | 4_4:+56955617 | Msa0689730:CDS |
GGCGGCAGCGTCACCGGAGA+CGG | 0.513612 | 4_4:-56951353 | None:intergenic |
GAAATCTCCATCTATTGATA+GGG | 0.517685 | 4_4:+56952817 | Msa0689730:CDS |
GGCTGCCGAACTCTGAAGGT+GGG | 0.518199 | 4_4:-56960260 | None:intergenic |
AAACCCGGTGATCCGCGAGC+AGG | 0.518854 | 4_4:-56957694 | None:intergenic |
TGTCTAGACTAGCAAAACGT+TGG | 0.520908 | 4_4:+56957577 | Msa0689730:intron |
CCTGTACTGATTGTGTATCC+AGG | 0.522683 | 4_4:+56952875 | Msa0689730:CDS |
TCAGCCGCGCAATTCTTCTC+CGG | 0.523034 | 4_4:+56951309 | Msa0689730:five_prime_UTR |
TGGATTATCACCTAGTGCAT+TGG | 0.523083 | 4_4:+56958358 | Msa0689730:CDS |
TAGGGTTTAAGGAGAGATGG+CGG | 0.523766 | 4_4:-56951411 | None:intergenic |
GAGAATTATTCCATCGGCCA+AGG | 0.526428 | 4_4:+56953667 | Msa0689730:CDS |
CAAGAGGAAGTGGTCGAGAA+AGG | 0.526715 | 4_4:+56959985 | Msa0689730:CDS |
GATACGATTTCTCCCACGTC+AGG | 0.528007 | 4_4:-56959807 | None:intergenic |
CAGTAACATTATAGTTATCA+GGG | 0.529146 | 4_4:-56951573 | None:intergenic |
ATCTCTCAGACTGAATAAGT+TGG | 0.530883 | 4_4:+56956856 | Msa0689730:CDS |
AGTAGAGGAAAACTGAACTT+AGG | 0.531688 | 4_4:-56951249 | None:intergenic |
GGAGAGAATGAGCAAGCTGT+AGG | 0.533273 | 4_4:+56958284 | Msa0689730:CDS |
TTATGGCATGATTCTTTAGG+AGG | 0.535241 | 4_4:+56959772 | Msa0689730:CDS |
TGGTAGACTTTGATCCATCA+AGG | 0.538711 | 4_4:+56959603 | Msa0689730:CDS |
GCGATGCCATCGGCCTGACG+TGG | 0.540608 | 4_4:+56959794 | Msa0689730:CDS |
ATACTTTGGTGTAGCTTGAA+CGG | 0.541725 | 4_4:-56953846 | None:intergenic |
ATACATCATTCACGCTCCAC+TGG | 0.543736 | 4_4:-56955732 | None:intergenic |
TCTTTAGGAGGCGATGCCAT+CGG | 0.547798 | 4_4:+56959784 | Msa0689730:CDS |
GGAAGATTGGATAGCGGCAA+TGG | 0.548829 | 4_4:-56951539 | None:intergenic |
AGGGTTTAAGGAGAGATGGC+GGG | 0.549254 | 4_4:-56951410 | None:intergenic |
ATAAGCAACCAAAAGCTCAA+TGG | 0.551656 | 4_4:-56957640 | None:intergenic |
CTTTCGAGCTTCGTTCTGCA+GGG | 0.552691 | 4_4:-56952852 | None:intergenic |
GGTAAATTACCAGAGTCTAA+AGG | 0.553990 | 4_4:-56956585 | None:intergenic |
TTATATATTGTAATGTAGTG+TGG | 0.554387 | 4_4:+56960309 | Msa0689730:three_prime_UTR |
AAATTTCCAGAGTGTGCTAT+CGG | 0.555755 | 4_4:-56956486 | None:intergenic |
TGCTTTGACACTTAAATGCA+TGG | 0.556334 | 4_4:+56955139 | Msa0689730:CDS |
CCTGGATACACAATCAGTAC+AGG | 0.557006 | 4_4:-56952875 | None:intergenic |
ACAATTGATTGTAGTATGAT+CGG | 0.557594 | 4_4:+56960186 | Msa0689730:three_prime_UTR |
TCGACTCCATGTCTCTGAAG+TGG | 0.557728 | 4_4:-56954480 | None:intergenic |
GGGCTGCCGAACTCTGAAGG+TGG | 0.558991 | 4_4:-56960261 | None:intergenic |
GTACACTAGACACCTTCAAA+GGG | 0.559345 | 4_4:-56956560 | None:intergenic |
TAGCCGAGCATGTGCTTAGT+CGG | 0.562064 | 4_4:+56956299 | Msa0689730:CDS |
CATTTAATGCTCCCTGCTCG+CGG | 0.563307 | 4_4:+56957682 | Msa0689730:CDS |
TTTGGAGAAAGCATTTAGGA+TGG | 0.563350 | 4_4:+56955900 | Msa0689730:CDS |
AGTTCAAATAATCCTTCTCA+TGG | 0.563782 | 4_4:-56952739 | None:intergenic |
AACCCGGTGATCCGCGAGCA+GGG | 0.564009 | 4_4:-56957693 | None:intergenic |
TTGCAGCCACTTCAGAGACA+TGG | 0.566145 | 4_4:+56954474 | Msa0689730:intron |
GAACTGGAAGCGTATGGTGG+CGG | 0.566632 | 4_4:-56951288 | None:intergenic |
AGTAGAATTGCAGAAAGCAC+AGG | 0.566781 | 4_4:+56956112 | Msa0689730:CDS |
GAGAGAATGAGCAAGCTGTA+GGG | 0.567509 | 4_4:+56958285 | Msa0689730:CDS |
AATGACTTGAGCCCGAGTGA+TGG | 0.568788 | 4_4:+56958056 | Msa0689730:CDS |
TAATTTGTTGCCTAGAAGCA+AGG | 0.570477 | 4_4:-56954145 | None:intergenic |
TGTACACTAGACACCTTCAA+AGG | 0.570796 | 4_4:-56956561 | None:intergenic |
AGTGTACAGCCTTTAGACTC+TGG | 0.571017 | 4_4:+56956576 | Msa0689730:CDS |
GAAGCGGAAACAAGAGGAAG+TGG | 0.571551 | 4_4:+56959975 | Msa0689730:intron |
GATGTGGATGTGCTAATGTC+AGG | 0.572289 | 4_4:+56957213 | Msa0689730:CDS |
CACTGCAACTGAGGATGATG+TGG | 0.572895 | 4_4:+56957197 | Msa0689730:CDS |
CCAATATCCCTAACAAAACT+CGG | 0.573218 | 4_4:-56951607 | None:intergenic |
GACTGAAATTCCTATGAACA+AGG | 0.573630 | 4_4:-56955872 | None:intergenic |
TCTAGTGGTTGAATGCATGA+TGG | 0.575502 | 4_4:-56956881 | None:intergenic |
GTTTAGGGTTTAAGGAGAGA+TGG | 0.575503 | 4_4:-56951414 | None:intergenic |
ATGGCAGTCTTCAAAAGAAG+TGG | 0.576725 | 4_4:+56957163 | Msa0689730:intron |
ACAGGAACACAAGTTGCTAA+AGG | 0.577130 | 4_4:+56959497 | Msa0689730:intron |
ACTACAGGTACCATGCTAAG+AGG | 0.577228 | 4_4:+56952759 | Msa0689730:CDS |
ACATTCTTTGAGTAAACTAA+GGG | 0.577577 | 4_4:-56957271 | None:intergenic |
ACCTGAATCATAATTTCTAG+TGG | 0.579487 | 4_4:-56956896 | None:intergenic |
TGGCAGTCTTCAAAAGAAGT+GGG | 0.580039 | 4_4:+56957164 | Msa0689730:intron |
GCTAGAAGATGAGGTTCAGG+AGG | 0.581102 | 4_4:-56956818 | None:intergenic |
AGCAAGGTGTGCCAGTATGA+CGG | 0.581622 | 4_4:-56954129 | None:intergenic |
CGGAAGGTGCTAAAAGCTGT+AGG | 0.581947 | 4_4:+56960018 | Msa0689730:CDS |
ACAGGAGTGCTTCCATGAGA+AGG | 0.582021 | 4_4:+56952727 | Msa0689730:intron |
TTCAATGAAGCGGAAACAAG+AGG | 0.584249 | 4_4:+56959969 | Msa0689730:intron |
TTTGGAAGACATGTATATGG+AGG | 0.585148 | 4_4:+56953880 | Msa0689730:CDS |
GATGACATGCACTGCAACTG+AGG | 0.585163 | 4_4:+56957188 | Msa0689730:CDS |
GGTCTCTACTTTCCAAAGGA+AGG | 0.587102 | 4_4:+56954503 | Msa0689730:CDS |
TGATTGTAGTATGATCGGTC+CGG | 0.588529 | 4_4:+56960191 | Msa0689730:three_prime_UTR |
ATGGAGAAGTGTAGAGGTGG+TGG | 0.588673 | 4_4:+56955158 | Msa0689730:CDS |
CATAGTTTGAGAGCAACTGC+AGG | 0.592540 | 4_4:-56957998 | None:intergenic |
ACTGTAGCCAAGAACATCAC+TGG | 0.595004 | 4_4:-56958308 | None:intergenic |
TGCCTAAAGATTTGAAGGGT+AGG | 0.596613 | 4_4:+56959552 | Msa0689730:CDS |
TACTTTCCAAAGGAAGGCGA+AGG | 0.597554 | 4_4:+56954509 | Msa0689730:CDS |
GAATGCTGAAAGTAAAGAAG+AGG | 0.598397 | 4_4:+56955936 | Msa0689730:CDS |
TTACGCGTCATGTTTAACTT+CGG | 0.598990 | 4_4:-56953704 | None:intergenic |
CAAGTTGCTAAAGGACATGC+TGG | 0.599455 | 4_4:+56959506 | Msa0689730:CDS |
ACTAGGTGATAATCCAGTCC+AGG | 0.600816 | 4_4:-56958351 | None:intergenic |
CAGGGAGCATTAAATGGCAA+AGG | 0.602397 | 4_4:-56957675 | None:intergenic |
TGGATGGAAGCAACTAAGAG+AGG | 0.602931 | 4_4:+56953931 | Msa0689730:CDS |
CTAAAGATATCCTTGGCCGA+TGG | 0.603987 | 4_4:-56953677 | None:intergenic |
AGTTTATGATAAAGCATCTG+AGG | 0.608023 | 4_4:+56958328 | Msa0689730:CDS |
ATGCCGACTAAGCACATGCT+CGG | 0.610610 | 4_4:-56956302 | None:intergenic |
CTCACAGATTTCTAAACCTG+TGG | 0.611386 | 4_4:+56951510 | Msa0689730:CDS |
GCTGAACTGGAAGCGTATGG+TGG | 0.611388 | 4_4:-56951291 | None:intergenic |
GGAGAAATCGTATCCTTCCA+AGG | 0.611605 | 4_4:+56959816 | Msa0689730:CDS |
GGCAGCGTCACCGGAGACGG+AGG | 0.611678 | 4_4:-56951350 | None:intergenic |
GGAAATTGGTCCATACAGAT+GGG | 0.612106 | 4_4:+56958796 | Msa0689730:CDS |
TTATTTATGTCAACAACCAA+AGG | 0.612446 | 4_4:-56958035 | None:intergenic |
CTTTACAGCTGGAAGGTTCG+GGG | 0.614274 | 4_4:+56956994 | Msa0689730:intron |
ACAAGGAGCTATATGCATCA+GGG | 0.615593 | 4_4:+56955593 | Msa0689730:CDS |
GATAAAGACACCTCTTAGCA+TGG | 0.616995 | 4_4:-56952769 | None:intergenic |
TAATTGATAAAATTGACTAG+AGG | 0.620235 | 4_4:-56960135 | None:intergenic |
TCTTATTATAAGATTACCCA+AGG | 0.621952 | 4_4:+56951729 | Msa0689730:CDS |
TTTCTCCCACGTCAGGCCGA+TGG | 0.623755 | 4_4:-56959800 | None:intergenic |
GATGAAACTCACATTTCAGG+AGG | 0.625753 | 4_4:+56958775 | Msa0689730:CDS |
TCGAGGTCTCTACTTTCCAA+AGG | 0.627437 | 4_4:+56954499 | Msa0689730:CDS |
GGCAGTCTTCAAAAGAAGTG+GGG | 0.630770 | 4_4:+56957165 | Msa0689730:intron |
TCGGCATCTATCTCTATCCA+AGG | 0.632177 | 4_4:+56956318 | Msa0689730:CDS |
GGAGAAATGCACAATGCCAG+TGG | 0.633444 | 4_4:+56955716 | Msa0689730:CDS |
ACAGATCCGATAGCACACTC+TGG | 0.634529 | 4_4:+56956480 | Msa0689730:intron |
GATATGCAAGTTTGTCCTTG+TGG | 0.635292 | 4_4:-56958972 | None:intergenic |
TTGTCATGTGTCATCCATCG+GGG | 0.636476 | 4_4:+56954961 | Msa0689730:CDS |
TGTGACTGGAGTGACAGTAT+GGG | 0.638261 | 4_4:-56951374 | None:intergenic |
TTTGAAGGGTAGGCGGCCAG+AGG | 0.639215 | 4_4:+56959562 | Msa0689730:CDS |
GCGGCTGAACTGGAAGCGTA+TGG | 0.639323 | 4_4:-56951294 | None:intergenic |
AATAAACTTTAAGGGAAACA+AGG | 0.639781 | 4_4:+56955576 | Msa0689730:CDS |
CGATGCCATCGGCCTGACGT+GGG | 0.641131 | 4_4:+56959795 | Msa0689730:CDS |
GAAAGGATACGACCCTCGGA+AGG | 0.641337 | 4_4:+56960002 | Msa0689730:CDS |
CCATTGATTATTCAAAAGGG+TGG | 0.641634 | 4_4:+56951661 | Msa0689730:CDS |
GAATAACTAACCAATGCACT+AGG | 0.644523 | 4_4:-56958368 | None:intergenic |
TATACTTTCTCAAGCCACCA+AGG | 0.646983 | 4_4:+56960070 | Msa0689730:CDS |
GCAGTCTTCAAAAGAAGTGG+GGG | 0.647101 | 4_4:+56957166 | Msa0689730:intron |
ACTCTACAGAGAGTCTTGCT+AGG | 0.648144 | 4_4:+56951689 | Msa0689730:CDS |
AGAATGGCACGATAGAGTAG+AGG | 0.648907 | 4_4:-56951264 | None:intergenic |
AAATGCATGGAGAAGTGTAG+AGG | 0.649090 | 4_4:+56955152 | Msa0689730:CDS |
CTAAAGATTTGAAGGGTAGG+CGG | 0.651617 | 4_4:+56959555 | Msa0689730:CDS |
GGGAATGTCAGAAATGGGAA+AGG | 0.651657 | 4_4:+56956257 | Msa0689730:CDS |
TCACCGGAGACGGAGGCAGT+CGG | 0.652723 | 4_4:-56951343 | None:intergenic |
AGAAACACACCTCATAAACC+CGG | 0.656425 | 4_4:-56957709 | None:intergenic |
CACTAGACACCTTCAAAGGG+AGG | 0.656957 | 4_4:-56956557 | None:intergenic |
TGCAATCATTCTTCTCCACA+AGG | 0.658037 | 4_4:+56958957 | Msa0689730:CDS |
GTATATTCAGCTTCAAGACG+AGG | 0.658593 | 4_4:+56955115 | Msa0689730:intron |
TGCATGGAGAAGTGTAGAGG+TGG | 0.668356 | 4_4:+56955155 | Msa0689730:CDS |
TCGAGAAAGGATACGACCCT+CGG | 0.670581 | 4_4:+56959998 | Msa0689730:CDS |
TTGTTGCCTAAAGATTTGAA+GGG | 0.674324 | 4_4:+56959548 | Msa0689730:CDS |
GATGAGAAGAGAAGCCGCTG+AGG | 0.676175 | 4_4:-56958994 | None:intergenic |
TGTCATGTGTCATCCATCGG+GGG | 0.678227 | 4_4:+56954962 | Msa0689730:CDS |
ACTTCAGAGACATGGAGTCG+AGG | 0.679494 | 4_4:+56954482 | Msa0689730:CDS |
CTAGAAGATGAGGTTCAGGA+GGG | 0.689021 | 4_4:-56956817 | None:intergenic |
GTCGATGGAAGATTGGATAG+CGG | 0.692877 | 4_4:-56951545 | None:intergenic |
ACACTCTGGAAATTTGCTCG+AGG | 0.697918 | 4_4:+56956494 | Msa0689730:CDS |
GACTGGAGTGACAGTATGGG+CGG | 0.698122 | 4_4:-56951371 | None:intergenic |
ACTGAAATTCCTATGAACAA+GGG | 0.701369 | 4_4:-56955871 | None:intergenic |
AATTGGTCCATACAGATGGG+AGG | 0.702380 | 4_4:+56958799 | Msa0689730:CDS |
ACAAACTTGCATATCCTCAG+CGG | 0.745599 | 4_4:+56958980 | Msa0689730:CDS |
GTAACCGGAGAAGAATTGCG+CGG | 0.756279 | 4_4:-56951313 | None:intergenic |
TGAATGCTGGAGATTGTACG+AGG | 0.795043 | 4_4:+56955630 | Msa0689730:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTAAATTCTTTAGTTTAT+CGG | + | chr4_4:56952660-56952679 | Msa0689730:intron | 10.0% |
!!! | TTTTTGTTTATTACTTAATA+GGG | - | chr4_4:56953222-56953241 | None:intergenic | 10.0% |
!!! | ATTTTTGTTTATTACTTAAT+AGG | - | chr4_4:56953223-56953242 | None:intergenic | 10.0% |
!! | AAATTAATATCATTATAAGA+AGG | + | chr4_4:56953239-56953258 | Msa0689730:intron | 10.0% |
!! | TAATAAGTAAAAAATTAATG+TGG | + | chr4_4:56954009-56954028 | Msa0689730:intron | 10.0% |
!! | TGAGATATATATTATAATAA+AGG | - | chr4_4:56955070-56955089 | None:intergenic | 10.0% |
!!! | ACTTCAAAAATAATTTATTT+TGG | - | chr4_4:56956613-56956632 | None:intergenic | 10.0% |
!! | TGTTATATAATTATTTCATA+TGG | + | chr4_4:56958418-56958437 | Msa0689730:intron | 10.0% |
!!! | TACTATTCAATCTTTTAAAA+TGG | + | chr4_4:56951752-56951771 | Msa0689730:intron | 15.0% |
!!! | ATTGATGTTTAATTTAGTTT+AGG | + | chr4_4:56951805-56951824 | Msa0689730:intron | 15.0% |
!!! | TTGATGTTTAATTTAGTTTA+GGG | + | chr4_4:56951806-56951825 | Msa0689730:intron | 15.0% |
!! | TCCAAATAAAAAAAAAAAGA+AGG | + | chr4_4:56952384-56952403 | Msa0689730:intron | 15.0% |
!!! | ACCTTCTTTTTTTTTTTATT+TGG | - | chr4_4:56952388-56952407 | None:intergenic | 15.0% |
!!! | AATAGTACTATTTTTAAAAG+AGG | + | chr4_4:56953169-56953188 | Msa0689730:intron | 15.0% |
!! | AAAATACTAGAATTATACTT+TGG | - | chr4_4:56953863-56953882 | None:intergenic | 15.0% |
!!! | AAAGTATAATTCTAGTATTT+TGG | + | chr4_4:56953862-56953881 | Msa0689730:CDS | 15.0% |
!!! | TTGATATTTGAATTTCTTTT+AGG | + | chr4_4:56953973-56953992 | Msa0689730:intron | 15.0% |
!!! | ATTCATTTTTAATTGATATG+TGG | + | chr4_4:56954693-56954712 | Msa0689730:intron | 15.0% |
!! | TAAAAGTTTCCATTTATATT+CGG | + | chr4_4:56954870-56954889 | Msa0689730:intron | 15.0% |
!! | TTAAATATGATTATTGTATG+AGG | + | chr4_4:56955219-56955238 | Msa0689730:CDS | 15.0% |
!!! | TTTTTTCTCTAAAATAGTAT+GGG | + | chr4_4:56956237-56956256 | Msa0689730:intron | 15.0% |
!! | TGTTAATGATATAAGTATAT+GGG | - | chr4_4:56956433-56956452 | None:intergenic | 15.0% |
!!! | CAAAAATAATTTATTTTGGT+GGG | - | chr4_4:56956609-56956628 | None:intergenic | 15.0% |
!!! | TCAAAAATAATTTATTTTGG+TGG | - | chr4_4:56956610-56956629 | None:intergenic | 15.0% |
!!! | ATGATTATTGATGATTTAAA+TGG | + | chr4_4:56957312-56957331 | Msa0689730:intron | 15.0% |
!! | AGAATTATACATTCATAAAA+TGG | + | chr4_4:56959200-56959219 | Msa0689730:intron | 15.0% |
!!! | AAACCATTGATTATTCAAAA+GGG | + | chr4_4:56951658-56951677 | Msa0689730:CDS | 20.0% |
!! | ATAAGATCCAAATTTAATTC+AGG | - | chr4_4:56951715-56951734 | None:intergenic | 20.0% |
!! | AAAAGTGGTTGAATTATTTA+CGG | + | chr4_4:56952224-56952243 | Msa0689730:intron | 20.0% |
!! | GAACAATAGTTGTAAATTAA+TGG | + | chr4_4:56952269-56952288 | Msa0689730:intron | 20.0% |
!! | TAAAAAAAAAAAGAAGGTCT+AGG | + | chr4_4:56952390-56952409 | Msa0689730:intron | 20.0% |
!! | AAAAAAAAAAAGAAGGTCTA+GGG | + | chr4_4:56952391-56952410 | Msa0689730:intron | 20.0% |
!! | AATAGATTTAGTAAAGCAAT+TGG | - | chr4_4:56952489-56952508 | None:intergenic | 20.0% |
!! | TGTCATAAATTTCTTGTATT+TGG | + | chr4_4:56953489-56953508 | Msa0689730:intron | 20.0% |
!! | GTCATAAATTTCTTGTATTT+GGG | + | chr4_4:56953490-56953509 | Msa0689730:intron | 20.0% |
!! | TCATAAATTTCTTGTATTTG+GGG | + | chr4_4:56953491-56953510 | Msa0689730:intron | 20.0% |
!!! | ATTTAAATTCCAATGCATTT+TGG | + | chr4_4:56953567-56953586 | Msa0689730:intron | 20.0% |
!! | AACATTCATAATTCAAAGAA+TGG | + | chr4_4:56953728-56953747 | Msa0689730:CDS | 20.0% |
!!! | TTAATCAACGAATTTTTTCT+TGG | + | chr4_4:56953911-56953930 | Msa0689730:CDS | 20.0% |
!! | AATAGATACATTATTGTGAT+TGG | + | chr4_4:56954449-56954468 | Msa0689730:intron | 20.0% |
!! | CATACAAAATAGAATTACAA+AGG | - | chr4_4:56954579-56954598 | None:intergenic | 20.0% |
!! | ATAAAGTATAAACAGAGATT+CGG | - | chr4_4:56954640-56954659 | None:intergenic | 20.0% |
!! | TAAAGAAAACTCTTAGTAAA+TGG | - | chr4_4:56954852-56954871 | None:intergenic | 20.0% |
!! | TCTTACAGAATAAACTTTAA+GGG | + | chr4_4:56955568-56955587 | Msa0689730:intron | 20.0% |
!! | CAAAATTTATTCGAGTAATA+TGG | + | chr4_4:56955695-56955714 | Msa0689730:CDS | 20.0% |
!!! | CTTTTTTCTCTAAAATAGTA+TGG | + | chr4_4:56956236-56956255 | Msa0689730:intron | 20.0% |
!! | GTTAATGATATAAGTATATG+GGG | - | chr4_4:56956432-56956451 | None:intergenic | 20.0% |
!! | CTGTTAATGATATAAGTATA+TGG | - | chr4_4:56956434-56956453 | None:intergenic | 20.0% |
!!! | TTTTTGCCAAAGAAAAAAAA+AGG | + | chr4_4:56956682-56956701 | Msa0689730:intron | 20.0% |
!! | ATCAACACATATTGTTAATT+TGG | - | chr4_4:56956763-56956782 | None:intergenic | 20.0% |
!! | TATGAGTTACAGATTATAAA+TGG | - | chr4_4:56957546-56957565 | None:intergenic | 20.0% |
!! | ATTTATAATCTGTAACTCAT+AGG | + | chr4_4:56957545-56957564 | Msa0689730:intron | 20.0% |
!! | AATAACCACAATTTCAAATA+AGG | - | chr4_4:56957933-56957952 | None:intergenic | 20.0% |
!!! | TACTTTCTTTTATATTGAAG+AGG | - | chr4_4:56958170-56958189 | None:intergenic | 20.0% |
!! | ATATAATTATTTCATATGGC+TGG | + | chr4_4:56958422-56958441 | Msa0689730:intron | 20.0% |
!!! | ATAATTCATTAGCCTTTTAA+AGG | - | chr4_4:56958889-56958908 | None:intergenic | 20.0% |
!! | ATTGCATCATAGTTATTTAA+AGG | - | chr4_4:56958943-56958962 | None:intergenic | 20.0% |
!! | AATTGAATGTATCTAAAAAG+TGG | + | chr4_4:56959139-56959158 | Msa0689730:intron | 20.0% |
!! | TAATTGATAAAATTGACTAG+AGG | - | chr4_4:56960138-56960157 | None:intergenic | 20.0% |
!! | CATTACAATATATAAGAATC+TGG | - | chr4_4:56960304-56960323 | None:intergenic | 20.0% |
!! | TTATATATTGTAATGTAGTG+TGG | + | chr4_4:56960309-56960328 | Msa0689730:three_prime_UTR | 20.0% |
! | CAGTAACATTATAGTTATCA+GGG | - | chr4_4:56951576-56951595 | None:intergenic | 25.0% |
!! | GAAACCATTGATTATTCAAA+AGG | + | chr4_4:56951657-56951676 | Msa0689730:CDS | 25.0% |
! | TCTTATTATAAGATTACCCA+AGG | + | chr4_4:56951729-56951748 | Msa0689730:CDS | 25.0% |
! | AAAAGATTGAATAGTACCTT+GGG | - | chr4_4:56951748-56951767 | None:intergenic | 25.0% |
! | TAAAAGATTGAATAGTACCT+TGG | - | chr4_4:56951749-56951768 | None:intergenic | 25.0% |
! | TTATGTATGACTAACAAAAG+TGG | + | chr4_4:56952209-56952228 | Msa0689730:intron | 25.0% |
! | AATTCAAGTAAAAGTAGACA+CGG | - | chr4_4:56952446-56952465 | None:intergenic | 25.0% |
!! | TTGTTTGAGATGGTAAAATA+AGG | - | chr4_4:56953145-56953164 | None:intergenic | 25.0% |
!!! | ACTATTCTTTTTGTTTGAGA+TGG | - | chr4_4:56953155-56953174 | None:intergenic | 25.0% |
!! | AATAACACTCTTATTTCTTC+AGG | + | chr4_4:56953413-56953432 | Msa0689730:intron | 25.0% |
!! | ATAACACTCTTATTTCTTCA+GGG | + | chr4_4:56953414-56953433 | Msa0689730:intron | 25.0% |
! | CATAAATTTCTTGTATTTGG+GGG | + | chr4_4:56953492-56953511 | Msa0689730:intron | 25.0% |
!!! | AGCTACATATATTACTTTTG+AGG | - | chr4_4:56953527-56953546 | None:intergenic | 25.0% |
!! | TTTGGTTCACAATCAATATT+TGG | + | chr4_4:56953585-56953604 | Msa0689730:intron | 25.0% |
! | AATCAATATTTGGAGACTAA+TGG | + | chr4_4:56953595-56953614 | Msa0689730:intron | 25.0% |
!! | TTTTGTGAGAATTATTCCAT+CGG | + | chr4_4:56953661-56953680 | Msa0689730:CDS | 25.0% |
!!! | TATTTTGGAAGACATGTATA+TGG | + | chr4_4:56953877-56953896 | Msa0689730:CDS | 25.0% |
! | TCAAATATCAAACCTTAAGT+AGG | - | chr4_4:56953964-56953983 | None:intergenic | 25.0% |
! | AATTCACTAAGAAACTACAA+TGG | - | chr4_4:56954356-56954375 | None:intergenic | 25.0% |
! | TAGTTTCTTAGTGAATTTGT+AGG | + | chr4_4:56954359-56954378 | Msa0689730:intron | 25.0% |
!!! | TTTGCTACTGACTTAAAAAT+TGG | + | chr4_4:56954385-56954404 | Msa0689730:intron | 25.0% |
! | TAAAGGAGAATAAAAGACAA+AGG | - | chr4_4:56955053-56955072 | None:intergenic | 25.0% |
!! | TTTGACATTGATAATCCATT+TGG | + | chr4_4:56955266-56955285 | Msa0689730:intron | 25.0% |
!! | TTGACATTGATAATCCATTT+GGG | + | chr4_4:56955267-56955286 | Msa0689730:intron | 25.0% |
! | TTATAATGATGTAAGCAAAC+AGG | + | chr4_4:56955350-56955369 | Msa0689730:intron | 25.0% |
! | CTCTTACAGAATAAACTTTA+AGG | + | chr4_4:56955567-56955586 | Msa0689730:intron | 25.0% |
!! | AATAAACTTTAAGGGAAACA+AGG | + | chr4_4:56955576-56955595 | Msa0689730:CDS | 25.0% |
!!! | ATACATGCTATTTTAGCTAA+AGG | + | chr4_4:56955658-56955677 | Msa0689730:CDS | 25.0% |
! | TGATTGAATTTACAACTTCA+GGG | + | chr4_4:56955826-56955845 | Msa0689730:intron | 25.0% |
!! | AACTACTACAATATTTTCCT+TGG | - | chr4_4:56956338-56956357 | None:intergenic | 25.0% |
! | TAAGTATATGGGGTAAAAAA+AGG | - | chr4_4:56956422-56956441 | None:intergenic | 25.0% |
!! | CTTCTAGCTAATGAAAAAAT+TGG | + | chr4_4:56956833-56956852 | Msa0689730:CDS | 25.0% |
!! | TTAGTAAATTTTCTCTGCAT+AGG | - | chr4_4:56956957-56956976 | None:intergenic | 25.0% |
! | TCTAGTTACCTTATTCAAAT+AGG | + | chr4_4:56957056-56957075 | Msa0689730:CDS | 25.0% |
! | ACCTTATTCAAATAGGAAAA+AGG | + | chr4_4:56957063-56957082 | Msa0689730:CDS | 25.0% |
!! | ACCTTTTTCCTATTTGAATA+AGG | - | chr4_4:56957067-56957086 | None:intergenic | 25.0% |
! | TTATTCAAATAGGAAAAAGG+TGG | + | chr4_4:56957066-56957085 | Msa0689730:intron | 25.0% |
! | TATTCAAATAGGAAAAAGGT+GGG | + | chr4_4:56957067-56957086 | Msa0689730:intron | 25.0% |
! | CAAGATATTGAAGCAAATAA+AGG | - | chr4_4:56957102-56957121 | None:intergenic | 25.0% |
! | ATGACATGATTCTGTTATTA+TGG | + | chr4_4:56957144-56957163 | Msa0689730:intron | 25.0% |
!! | TCTTAAAATTTTGCATGAGA+GGG | + | chr4_4:56957248-56957267 | Msa0689730:CDS | 25.0% |
! | ACATTCTTTGAGTAAACTAA+GGG | - | chr4_4:56957274-56957293 | None:intergenic | 25.0% |
! | TACATTCTTTGAGTAAACTA+AGG | - | chr4_4:56957275-56957294 | None:intergenic | 25.0% |
! | TAGTTTACTCAAAGAATGTA+TGG | + | chr4_4:56957275-56957294 | Msa0689730:intron | 25.0% |
! | TGATAAGTGAAACTCAAAAA+TGG | - | chr4_4:56957343-56957362 | None:intergenic | 25.0% |
!! | AAACCTTTTTAATATGCAGT+TGG | + | chr4_4:56957362-56957381 | Msa0689730:intron | 25.0% |
!! | AACCTTTTTAATATGCAGTT+GGG | + | chr4_4:56957363-56957382 | Msa0689730:intron | 25.0% |
! | TTGGGAATGATAAAAAAACA+CGG | + | chr4_4:56957381-56957400 | Msa0689730:CDS | 25.0% |
! | TAACTATTGGTCCATATATT+GGG | - | chr4_4:56957481-56957500 | None:intergenic | 25.0% |
! | GTTACAGATTATAAATGGAA+TGG | - | chr4_4:56957541-56957560 | None:intergenic | 25.0% |
!! | TCATTTACTTAGCAGATTTT+GGG | + | chr4_4:56957745-56957764 | Msa0689730:intron | 25.0% |
!!! | AACACTTTTATTTCATTGAC+AGG | + | chr4_4:56957973-56957992 | Msa0689730:intron | 25.0% |
! | TTATTTATGTCAACAACCAA+AGG | - | chr4_4:56958038-56958057 | None:intergenic | 25.0% |
!!! | TTTATTTCTTTTCCATCACT+CGG | - | chr4_4:56958071-56958090 | None:intergenic | 25.0% |
!!! | TGTTTGTAGTCTGTTATTTT+TGG | + | chr4_4:56958138-56958157 | Msa0689730:intron | 25.0% |
!!! | GTTTGTAGTCTGTTATTTTT+GGG | + | chr4_4:56958139-56958158 | Msa0689730:intron | 25.0% |
!!! | TTTGTAGTCTGTTATTTTTG+GGG | + | chr4_4:56958140-56958159 | Msa0689730:intron | 25.0% |
! | AAGTAAAATCTTGTTACTGT+TGG | + | chr4_4:56958185-56958204 | Msa0689730:intron | 25.0% |
! | TTTGCTAAAAAGAAAAAGTC+AGG | + | chr4_4:56958262-56958281 | Msa0689730:CDS | 25.0% |
! | TTGCTAAAAAGAAAAAGTCA+GGG | + | chr4_4:56958263-56958282 | Msa0689730:CDS | 25.0% |
! | GTTAGTTATTCTCTCTAAAT+TGG | + | chr4_4:56958380-56958399 | Msa0689730:intron | 25.0% |
! | CATTACATTACAATTAACAG+AGG | - | chr4_4:56958468-56958487 | None:intergenic | 25.0% |
! | AATTAATAGTCACAACAGTT+CGG | + | chr4_4:56958579-56958598 | Msa0689730:intron | 25.0% |
! | TGTTGTAATGAATCATTAAC+AGG | + | chr4_4:56958706-56958725 | Msa0689730:intron | 25.0% |
! | ATCATTAACAGGAACTTAAA+AGG | + | chr4_4:56958717-56958736 | Msa0689730:intron | 25.0% |
!! | AGAGTTTGATTTCCTTTAAA+AGG | + | chr4_4:56958874-56958893 | Msa0689730:intron | 25.0% |
! | CATTCAATTAATGATGTATG+TGG | + | chr4_4:56959089-56959108 | Msa0689730:intron | 25.0% |
! | TACATTCATAAAATGGTTCA+AGG | + | chr4_4:56959207-56959226 | Msa0689730:intron | 25.0% |
! | ACATTCATAAAATGGTTCAA+GGG | + | chr4_4:56959208-56959227 | Msa0689730:intron | 25.0% |
! | AATGATAATCATTTGTAGCA+AGG | + | chr4_4:56959277-56959296 | Msa0689730:intron | 25.0% |
! | TAATCAAATGATATTCTCGT+TGG | + | chr4_4:56959467-56959486 | Msa0689730:intron | 25.0% |
! | AAATCTTTAGGCAACAAAAA+GGG | - | chr4_4:56959545-56959564 | None:intergenic | 25.0% |
!!! | AACTTATTTTTAAGTTCCTC+TGG | - | chr4_4:56959581-56959600 | None:intergenic | 25.0% |
! | TAGAGGTAAGTACAATTAAA+AGG | + | chr4_4:56959642-56959661 | Msa0689730:intron | 25.0% |
! | TGATATCAAGATTAGTAAAG+AGG | - | chr4_4:56959711-56959730 | None:intergenic | 25.0% |
! | AATTCTTAAATCCATGCAAA+TGG | + | chr4_4:56959917-56959936 | Msa0689730:intron | 25.0% |
!!! | TTCTTTCTTTTTCAATGAAG+CGG | + | chr4_4:56959959-56959978 | Msa0689730:intron | 25.0% |
! | ACAATTGATTGTAGTATGAT+CGG | + | chr4_4:56960186-56960205 | Msa0689730:three_prime_UTR | 25.0% |
!! | AAAAAGGTTTTCAGGGTTTA+GGG | - | chr4_4:56951432-56951451 | None:intergenic | 30.0% |
! | TCCATTGAAAAAGGTTTTCA+GGG | - | chr4_4:56951439-56951458 | None:intergenic | 30.0% |
! | ATCCATTGAAAAAGGTTTTC+AGG | - | chr4_4:56951440-56951459 | None:intergenic | 30.0% |
!!! | ACCTTTTTCAATGGATTCAA+TGG | + | chr4_4:56951444-56951463 | Msa0689730:exon | 30.0% |
TCCATTGAATCCATTGAAAA+AGG | - | chr4_4:56951448-56951467 | None:intergenic | 30.0% | |
GCAGTAACATTATAGTTATC+AGG | - | chr4_4:56951577-56951596 | None:intergenic | 30.0% | |
! | CTATAATGTTACTGCTGATT+TGG | + | chr4_4:56951582-56951601 | Msa0689730:CDS | 30.0% |
TTGTCATAAGCTGTTTATGT+AGG | + | chr4_4:56952024-56952043 | Msa0689730:intron | 30.0% | |
!! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr4_4:56952054-56952073 | None:intergenic | 30.0% |
!! | TTAAGTTTTGTGAGACTGTT+TGG | - | chr4_4:56952055-56952074 | None:intergenic | 30.0% |
AAACAGTCTCACAAAACTTA+AGG | + | chr4_4:56952054-56952073 | Msa0689730:intron | 30.0% | |
ATAGAATACACTTGCTCTAA+GGG | - | chr4_4:56952115-56952134 | None:intergenic | 30.0% | |
AATAGAATACACTTGCTCTA+AGG | - | chr4_4:56952116-56952135 | None:intergenic | 30.0% | |
TTAGAGCAAGTGTATTCTAT+TGG | + | chr4_4:56952115-56952134 | Msa0689730:intron | 30.0% | |
TTGTAAATTAATGGAGAGAG+AGG | + | chr4_4:56952278-56952297 | Msa0689730:intron | 30.0% | |
ATTCAAGTAAAAGTAGACAC+GGG | - | chr4_4:56952445-56952464 | None:intergenic | 30.0% | |
ACTAAATCTATTAACCCGTT+TGG | + | chr4_4:56952497-56952516 | Msa0689730:intron | 30.0% | |
AATCATAACAGTCAGATCAA+TGG | - | chr4_4:56952600-56952619 | None:intergenic | 30.0% | |
ACTGTAATTTCTGTTATGAC+AGG | + | chr4_4:56952709-56952728 | Msa0689730:intron | 30.0% | |
AGTTCAAATAATCCTTCTCA+TGG | - | chr4_4:56952742-56952761 | None:intergenic | 30.0% | |
AGAAGGATTATTTGAACTAC+AGG | + | chr4_4:56952744-56952763 | Msa0689730:CDS | 30.0% | |
AGAAATCTCCATCTATTGAT+AGG | + | chr4_4:56952816-56952835 | Msa0689730:CDS | 30.0% | |
GAAATCTCCATCTATTGATA+GGG | + | chr4_4:56952817-56952836 | Msa0689730:CDS | 30.0% | |
!! | AGCCAGAAAAATTTGTTAAG+AGG | + | chr4_4:56952922-56952941 | Msa0689730:intron | 30.0% |
!! | GCCAGAAAAATTTGTTAAGA+GGG | + | chr4_4:56952923-56952942 | Msa0689730:intron | 30.0% |
!! | CCAGAAAAATTTGTTAAGAG+GGG | + | chr4_4:56952924-56952943 | Msa0689730:intron | 30.0% |
ATAATTCATGCACATTTGCT+TGG | + | chr4_4:56952952-56952971 | Msa0689730:intron | 30.0% | |
TATAAGAAGGTGACTAAATG+TGG | + | chr4_4:56953252-56953271 | Msa0689730:intron | 30.0% | |
ATAAGAAGGTGACTAAATGT+GGG | + | chr4_4:56953253-56953272 | Msa0689730:intron | 30.0% | |
AGTACAACTAATCATGTTTC+AGG | + | chr4_4:56953373-56953392 | Msa0689730:intron | 30.0% | |
GTACAACTAATCATGTTTCA+GGG | + | chr4_4:56953374-56953393 | Msa0689730:intron | 30.0% | |
TACAACTAATCATGTTTCAG+GGG | + | chr4_4:56953375-56953394 | Msa0689730:intron | 30.0% | |
! | TAACACTCTTATTTCTTCAG+GGG | + | chr4_4:56953415-56953434 | Msa0689730:intron | 30.0% |
TTTAAATGCCAAGACATACA+GGG | - | chr4_4:56953554-56953573 | None:intergenic | 30.0% | |
ATTTAAATGCCAAGACATAC+AGG | - | chr4_4:56953555-56953574 | None:intergenic | 30.0% | |
ATTGACTGTTAATGTTCAGA+AGG | + | chr4_4:56953818-56953837 | Msa0689730:intron | 30.0% | |
!!! | TCAACGAATTTTTTCTTGGA+TGG | + | chr4_4:56953915-56953934 | Msa0689730:CDS | 30.0% |
ACAAATTAGTAGGTCAATGA+AGG | + | chr4_4:56954160-56954179 | Msa0689730:CDS | 30.0% | |
ATACATACCAATGAAGTTCA+AGG | - | chr4_4:56954207-56954226 | None:intergenic | 30.0% | |
GAATCGAGAATACCAAAATA+TGG | - | chr4_4:56954297-56954316 | None:intergenic | 30.0% | |
! | AAATTGGCTTAGATTGAAAG+TGG | + | chr4_4:56954401-56954420 | Msa0689730:intron | 30.0% |
! | AATTGGCTTAGATTGAAAGT+GGG | + | chr4_4:56954402-56954421 | Msa0689730:intron | 30.0% |
CGAAGGAAATATTACTAAAG+AGG | + | chr4_4:56954526-56954545 | Msa0689730:CDS | 30.0% | |
TTACAAAGGTAGACAAAAGA+AGG | - | chr4_4:56954565-56954584 | None:intergenic | 30.0% | |
TATCACCTTTAACTCTTCAT+TGG | + | chr4_4:56954753-56954772 | Msa0689730:intron | 30.0% | |
TGAATAGCTCCGAATATAAA+TGG | - | chr4_4:56954882-56954901 | None:intergenic | 30.0% | |
! | GGTTTTTCTCAGGTATTTTT+TGG | + | chr4_4:56955017-56955036 | Msa0689730:intron | 30.0% |
TTTAACAGCATAGTCAATCT+TGG | - | chr4_4:56955204-56955223 | None:intergenic | 30.0% | |
! | TGACATTGATAATCCATTTG+GGG | + | chr4_4:56955268-56955287 | Msa0689730:intron | 30.0% |
GTATTTGATTGGAAAGGTTT+AGG | + | chr4_4:56955290-56955309 | Msa0689730:intron | 30.0% | |
ATACAGCATCTGAATCAATA+TGG | - | chr4_4:56955464-56955483 | None:intergenic | 30.0% | |
!! | CAGTTGATTCATTTTCATGA+TGG | + | chr4_4:56955500-56955519 | Msa0689730:intron | 30.0% |
AAATTCAATCAGAGACAGAA+CGG | - | chr4_4:56955817-56955836 | None:intergenic | 30.0% | |
CTGATTGAATTTACAACTTC+AGG | + | chr4_4:56955825-56955844 | Msa0689730:intron | 30.0% | |
ACTGAAATTCCTATGAACAA+GGG | - | chr4_4:56955874-56955893 | None:intergenic | 30.0% | |
! | TCTTGAATTTCGGAAGTTTT+GGG | + | chr4_4:56956057-56956076 | Msa0689730:CDS | 30.0% |
GTCTTTAAATCTTCTAAGCT+CGG | - | chr4_4:56956092-56956111 | None:intergenic | 30.0% | |
CCATGTTAGACATATTATCT+TGG | - | chr4_4:56956211-56956230 | None:intergenic | 30.0% | |
CCAAGATAATATGTCTAACA+TGG | + | chr4_4:56956208-56956227 | Msa0689730:intron | 30.0% | |
GGAAAATATTGTAGTAGTTG+TGG | + | chr4_4:56956339-56956358 | Msa0689730:CDS | 30.0% | |
! | TGGCAAAAAGTTTTCAGTTT+TGG | - | chr4_4:56956671-56956690 | None:intergenic | 30.0% |
!!! | GTACTGCCTTTTTTTTTCTT+TGG | - | chr4_4:56956691-56956710 | None:intergenic | 30.0% |
! | TTTTCATTAGCTAGAAGATG+AGG | - | chr4_4:56956830-56956849 | None:intergenic | 30.0% |
ACCACTAGAAATTATGATTC+AGG | + | chr4_4:56956895-56956914 | Msa0689730:CDS | 30.0% | |
! | ACCTGAATCATAATTTCTAG+TGG | - | chr4_4:56956899-56956918 | None:intergenic | 30.0% |
TCAATTGCAATTTCATCCAT+TGG | - | chr4_4:56957026-56957045 | None:intergenic | 30.0% | |
! | GTCTTAAAATTTTGCATGAG+AGG | + | chr4_4:56957247-56957266 | Msa0689730:CDS | 30.0% |
TTCCCAACTGCATATTAAAA+AGG | - | chr4_4:56957368-56957387 | None:intergenic | 30.0% | |
TGGGAATGATAAAAAAACAC+GGG | + | chr4_4:56957382-56957401 | Msa0689730:CDS | 30.0% | |
CTAACTATTGGTCCATATAT+TGG | - | chr4_4:56957482-56957501 | None:intergenic | 30.0% | |
CAATATATGGACCAATAGTT+AGG | + | chr4_4:56957480-56957499 | Msa0689730:CDS | 30.0% | |
! | CTCATTTACTTAGCAGATTT+TGG | + | chr4_4:56957744-56957763 | Msa0689730:intron | 30.0% |
! | TTTAAACCTGATTTTCTCGT+GGG | + | chr4_4:56957794-56957813 | Msa0689730:intron | 30.0% |
! | AGCATCCTTATTTGAAATTG+TGG | + | chr4_4:56957925-56957944 | Msa0689730:intron | 30.0% |
!! | TTATTTCTTTTCCATCACTC+GGG | - | chr4_4:56958070-56958089 | None:intergenic | 30.0% |
! | AGTTTATGATAAAGCATCTG+AGG | + | chr4_4:56958328-56958347 | Msa0689730:CDS | 30.0% |
TAATTATTTCATATGGCTGG+AGG | + | chr4_4:56958425-56958444 | Msa0689730:intron | 30.0% | |
TACATTACAATTAACAGAGG+AGG | - | chr4_4:56958465-56958484 | None:intergenic | 30.0% | |
TTGTTCAGTCACTAAATTCT+AGG | + | chr4_4:56958501-56958520 | Msa0689730:intron | 30.0% | |
ATTAATAGTCACAACAGTTC+GGG | + | chr4_4:56958580-56958599 | Msa0689730:intron | 30.0% | |
GTATTGAAATGTTGACATCA+AGG | - | chr4_4:56958639-56958658 | None:intergenic | 30.0% | |
TATTTAAAGGAGTTCGCAAA+AGG | - | chr4_4:56958930-56958949 | None:intergenic | 30.0% | |
ATAGCATAGTTCTTAATAGC+TGG | + | chr4_4:56959043-56959062 | Msa0689730:intron | 30.0% | |
! | TTTTTGCTTATGTTAGTGAC+CGG | + | chr4_4:56959163-56959182 | Msa0689730:intron | 30.0% |
GTGTGCATGATAAAATATTC+TGG | + | chr4_4:56959335-56959354 | Msa0689730:intron | 30.0% | |
! | TTTTCGAAACGTATAAGACA+AGG | + | chr4_4:56959359-56959378 | Msa0689730:intron | 30.0% |
CAATGAAGATGATAACATGA+GGG | - | chr4_4:56959434-56959453 | None:intergenic | 30.0% | |
TCAATGAAGATGATAACATG+AGG | - | chr4_4:56959435-56959454 | None:intergenic | 30.0% | |
CAAATCTTTAGGCAACAAAA+AGG | - | chr4_4:56959546-56959565 | None:intergenic | 30.0% | |
TTTGTTGCCTAAAGATTTGA+AGG | + | chr4_4:56959547-56959566 | Msa0689730:CDS | 30.0% | |
TTGTTGCCTAAAGATTTGAA+GGG | + | chr4_4:56959548-56959567 | Msa0689730:CDS | 30.0% | |
GGAACTTAAAAATAAGTTGC+TGG | + | chr4_4:56959583-56959602 | Msa0689730:CDS | 30.0% | |
GTGCTTTATCAAAGATTTAG+AGG | + | chr4_4:56959625-56959644 | Msa0689730:CDS | 30.0% | |
ATACTCGTATTGTTTCCATT+TGG | + | chr4_4:56959679-56959698 | Msa0689730:intron | 30.0% | |
TTTCCACCAAATTCCAATTA+TGG | + | chr4_4:56959755-56959774 | Msa0689730:CDS | 30.0% | |
ATCATGCCATAATTGGAATT+TGG | - | chr4_4:56959764-56959783 | None:intergenic | 30.0% | |
CTAAAGAATCATGCCATAAT+TGG | - | chr4_4:56959771-56959790 | None:intergenic | 30.0% | |
CAATTATGGCATGATTCTTT+AGG | + | chr4_4:56959769-56959788 | Msa0689730:CDS | 30.0% | |
TATGCACAAATTGTATACCT+TGG | - | chr4_4:56959836-56959855 | None:intergenic | 30.0% | |
!!! | TGGAACTCTTCATTTTTTCT+GGG | - | chr4_4:56960284-56960303 | None:intergenic | 30.0% |
CAAACTGATGTATTTGTGTT+AGG | - | chr4_4:56960436-56960455 | None:intergenic | 30.0% | |
AGTAGAGGAAAACTGAACTT+AGG | - | chr4_4:56951252-56951271 | None:intergenic | 35.0% | |
!! | TTTTCAGGGTTTAGGGTTTA+AGG | - | chr4_4:56951425-56951444 | None:intergenic | 35.0% |
!! | GAAAAAGGTTTTCAGGGTTT+AGG | - | chr4_4:56951433-56951452 | None:intergenic | 35.0% |
!!! | ACCCTGAAAACCTTTTTCAA+TGG | + | chr4_4:56951435-56951454 | Msa0689730:exon | 35.0% |
! | AATGGATTCAATGGAGTTCA+AGG | + | chr4_4:56951453-56951472 | Msa0689730:exon | 35.0% |
CCAATATCCCTAACAAAACT+CGG | - | chr4_4:56951610-56951629 | None:intergenic | 35.0% | |
! | CCACCCTTTTGAATAATCAA+TGG | - | chr4_4:56951664-56951683 | None:intergenic | 35.0% |
! | CCATTGATTATTCAAAAGGG+TGG | + | chr4_4:56951661-56951680 | Msa0689730:CDS | 35.0% |
TGCTAGGCCTGAATTAAATT+TGG | + | chr4_4:56951705-56951724 | Msa0689730:CDS | 35.0% | |
!! | GCTGTTTTCATAAGCTATGT+TGG | + | chr4_4:56951963-56951982 | Msa0689730:intron | 35.0% |
! | TCAAATAAGTCGATTCAAGC+AGG | + | chr4_4:56952089-56952108 | Msa0689730:intron | 35.0% |
AAAAGATTATCGTATCCGCA+TGG | + | chr4_4:56952149-56952168 | Msa0689730:intron | 35.0% | |
! | CATTTGCTAATCAATCCATG+CGG | - | chr4_4:56952167-56952186 | None:intergenic | 35.0% |
! | AAAAAGAAGGTCTAGGGTTA+TGG | + | chr4_4:56952397-56952416 | Msa0689730:intron | 35.0% |
TTCAAGTAAAAGTAGACACG+GGG | - | chr4_4:56952444-56952463 | None:intergenic | 35.0% | |
CATTCAACCCTATCAATAGA+TGG | - | chr4_4:56952827-56952846 | None:intergenic | 35.0% | |
CATCTATTGATAGGGTTGAA+TGG | + | chr4_4:56952825-56952844 | Msa0689730:CDS | 35.0% | |
AGGTTAGTACTATGTCTTCA+GGG | + | chr4_4:56952895-56952914 | Msa0689730:intron | 35.0% | |
! | CCCCTCTTAACAAATTTTTC+TGG | - | chr4_4:56952927-56952946 | None:intergenic | 35.0% |
TAAGAAGGTGACTAAATGTG+GGG | + | chr4_4:56953254-56953273 | Msa0689730:intron | 35.0% | |
TATATATGTACCAAGTGACG+TGG | + | chr4_4:56953295-56953314 | Msa0689730:intron | 35.0% | |
! | AACACTCTTATTTCTTCAGG+GGG | + | chr4_4:56953416-56953435 | Msa0689730:intron | 35.0% |
GGCGAGTATGAATTTCTTTA+GGG | + | chr4_4:56953438-56953457 | Msa0689730:intron | 35.0% | |
GCGAGTATGAATTTCTTTAG+GGG | + | chr4_4:56953439-56953458 | Msa0689730:intron | 35.0% | |
CGAGTATGAATTTCTTTAGG+GGG | + | chr4_4:56953440-56953459 | Msa0689730:intron | 35.0% | |
! | GAGTATGAATTTCTTTAGGG+GGG | + | chr4_4:56953441-56953460 | Msa0689730:intron | 35.0% |
AAATTTCTTGTATTTGGGGG+TGG | + | chr4_4:56953495-56953514 | Msa0689730:intron | 35.0% | |
GATTGTGAACCAAAATGCAT+TGG | - | chr4_4:56953579-56953598 | None:intergenic | 35.0% | |
! | TTACGCGTCATGTTTAACTT+CGG | - | chr4_4:56953707-56953726 | None:intergenic | 35.0% |
GAAACTGAATGTAGATGCAA+AGG | - | chr4_4:56953760-56953779 | None:intergenic | 35.0% | |
! | ATACTTTGGTGTAGCTTGAA+CGG | - | chr4_4:56953849-56953868 | None:intergenic | 35.0% |
TTTGGAAGACATGTATATGG+AGG | + | chr4_4:56953880-56953899 | Msa0689730:CDS | 35.0% | |
! | AGAGGCTTTAATCCTACTTA+AGG | + | chr4_4:56953949-56953968 | Msa0689730:CDS | 35.0% |
ATACCTAAAATTCGGAAGAG+CGG | - | chr4_4:56954052-56954071 | None:intergenic | 35.0% | |
!! | CTCTTCCGAATTTTAGGTAT+GGG | + | chr4_4:56954052-56954071 | Msa0689730:intron | 35.0% |
TATGTTCATGATTGCCTGAA+TGG | + | chr4_4:56954095-56954114 | Msa0689730:CDS | 35.0% | |
!! | ATTTTTGCTATCCGTCATAC+TGG | + | chr4_4:56954118-56954137 | Msa0689730:CDS | 35.0% |
!! | TAATTTGTTGCCTAGAAGCA+AGG | - | chr4_4:56954148-56954167 | None:intergenic | 35.0% |
CTTCTAGGCAACAAATTAGT+AGG | + | chr4_4:56954150-56954169 | Msa0689730:CDS | 35.0% | |
! | TATACTCTCCTTTGCAGTTT+TGG | + | chr4_4:56954228-56954247 | Msa0689730:intron | 35.0% |
AAAATGAGCCAAAACTGCAA+AGG | - | chr4_4:56954239-56954258 | None:intergenic | 35.0% | |
! | TTTAGTGCTTTGATGACCAT+AGG | + | chr4_4:56954260-56954279 | Msa0689730:intron | 35.0% |
! | TTAGTGCTTTGATGACCATA+GGG | + | chr4_4:56954261-56954280 | Msa0689730:intron | 35.0% |
! | ATTGGCTTAGATTGAAAGTG+GGG | + | chr4_4:56954403-56954422 | Msa0689730:intron | 35.0% |
ACAAAAGAAGGTTAGAGATC+TGG | - | chr4_4:56954553-56954572 | None:intergenic | 35.0% | |
TAAACAGAGATTCGGATATC+AGG | - | chr4_4:56954632-56954651 | None:intergenic | 35.0% | |
ACTTGCCAATGAAGAGTTAA+AGG | - | chr4_4:56954761-56954780 | None:intergenic | 35.0% | |
AGGACAGAATGCAACTTAAA+GGG | + | chr4_4:56954928-56954947 | Msa0689730:intron | 35.0% | |
!!! | ATTTGGCTTTTCGAATGTCT+AGG | + | chr4_4:56954991-56955010 | Msa0689730:CDS | 35.0% |
AGGAGAATAAAAGACAAAGG+TGG | - | chr4_4:56955050-56955069 | None:intergenic | 35.0% | |
TGCTTTGACACTTAAATGCA+TGG | + | chr4_4:56955139-56955158 | Msa0689730:CDS | 35.0% | |
! | ATCCATTTGGGGTATTTGAT+TGG | + | chr4_4:56955279-56955298 | Msa0689730:intron | 35.0% |
TTCCAATCAAATACCCCAAA+TGG | - | chr4_4:56955284-56955303 | None:intergenic | 35.0% | |
! | TTTGGGGTATTTGATTGGAA+AGG | + | chr4_4:56955284-56955303 | Msa0689730:intron | 35.0% |
ATGTAAGCAAACAGGTTTGT+AGG | + | chr4_4:56955358-56955377 | Msa0689730:intron | 35.0% | |
!! | AGACTTGCATTTGCTTTTCT+TGG | + | chr4_4:56955429-56955448 | Msa0689730:intron | 35.0% |
!! | ATATGCATCAGGGTTTTGTA+TGG | + | chr4_4:56955603-56955622 | Msa0689730:CDS | 35.0% |
TTTGTATGGATGATGAATGC+TGG | + | chr4_4:56955617-56955636 | Msa0689730:CDS | 35.0% | |
GACTGAAATTCCTATGAACA+AGG | - | chr4_4:56955875-56955894 | None:intergenic | 35.0% | |
AGGAATTTCAGTCAGTGATT+TGG | + | chr4_4:56955882-56955901 | Msa0689730:CDS | 35.0% | |
!! | GTGATTTGGAGAAAGCATTT+AGG | + | chr4_4:56955896-56955915 | Msa0689730:CDS | 35.0% |
!! | TTTGGAGAAAGCATTTAGGA+TGG | + | chr4_4:56955900-56955919 | Msa0689730:CDS | 35.0% |
! | GCATTTAGGATGGTTGATAT+TGG | + | chr4_4:56955910-56955929 | Msa0689730:CDS | 35.0% |
GAAATAATGAGTAAGGACAG+TGG | - | chr4_4:56956029-56956048 | None:intergenic | 35.0% | |
CCTGCTTGAAATAATGAGTA+AGG | - | chr4_4:56956036-56956055 | None:intergenic | 35.0% | |
CCTTACTCATTATTTCAAGC+AGG | + | chr4_4:56956033-56956052 | Msa0689730:intron | 35.0% | |
! | CTCTTGAATTTCGGAAGTTT+TGG | + | chr4_4:56956056-56956075 | Msa0689730:CDS | 35.0% |
! | CTTGAATTTCGGAAGTTTTG+GGG | + | chr4_4:56956058-56956077 | Msa0689730:CDS | 35.0% |
TAGTATGGGAATGTCAGAAA+TGG | + | chr4_4:56956251-56956270 | Msa0689730:intron | 35.0% | |
AGTATGGGAATGTCAGAAAT+GGG | + | chr4_4:56956252-56956271 | Msa0689730:intron | 35.0% | |
GGATCAACTTGATTTCTCTT+TGG | + | chr4_4:56956360-56956379 | Msa0689730:CDS | 35.0% | |
GTATATGGGGTAAAAAAAGG+AGG | - | chr4_4:56956419-56956438 | None:intergenic | 35.0% | |
AAATTTCCAGAGTGTGCTAT+CGG | - | chr4_4:56956489-56956508 | None:intergenic | 35.0% | |
GGTAAATTACCAGAGTCTAA+AGG | - | chr4_4:56956588-56956607 | None:intergenic | 35.0% | |
! | AAGTCTTTTGTGTCAATGCT+TGG | + | chr4_4:56956629-56956648 | Msa0689730:intron | 35.0% |
! | AGTCTTTTGTGTCAATGCTT+GGG | + | chr4_4:56956630-56956649 | Msa0689730:intron | 35.0% |
GATTACCATTTACAGCATTC+AGG | + | chr4_4:56956780-56956799 | Msa0689730:intron | 35.0% | |
GTAAACCTGAATGCTGTAAA+TGG | - | chr4_4:56956788-56956807 | None:intergenic | 35.0% | |
ATCTCTCAGACTGAATAAGT+TGG | + | chr4_4:56956856-56956875 | Msa0689730:CDS | 35.0% | |
ATTTGTTCTCTCTTTACAGC+TGG | + | chr4_4:56956983-56957002 | Msa0689730:intron | 35.0% | |
!! | GACAAGAAACTTTTGATTCG+TGG | + | chr4_4:56957416-56957435 | Msa0689730:CDS | 35.0% |
CAACATGCTAGCATGATTAA+TGG | + | chr4_4:56957440-56957459 | Msa0689730:CDS | 35.0% | |
CAAAGTCGTTACCCAATATA+TGG | + | chr4_4:56957467-56957486 | Msa0689730:CDS | 35.0% | |
TTAAACGCTCACCTAACTAT+TGG | - | chr4_4:56957494-56957513 | None:intergenic | 35.0% | |
ACATCTATTCTCTGCTTGTT+TGG | + | chr4_4:56957608-56957627 | Msa0689730:CDS | 35.0% | |
ATAAGCAACCAAAAGCTCAA+TGG | - | chr4_4:56957643-56957662 | None:intergenic | 35.0% | |
! | CTTTAAACCTGATTTTCTCG+TGG | + | chr4_4:56957793-56957812 | Msa0689730:intron | 35.0% |
TGTCTCAAATCTCATTACCA+CGG | + | chr4_4:56957819-56957838 | Msa0689730:intron | 35.0% | |
AGTTGCTCTCAAACTATGAT+TGG | + | chr4_4:56958003-56958022 | Msa0689730:CDS | 35.0% | |
TGATTGGACTTATTCTCCTT+TGG | + | chr4_4:56958019-56958038 | Msa0689730:CDS | 35.0% | |
!! | TCTTGTTACTGTTGGTCTTT+AGG | + | chr4_4:56958193-56958212 | Msa0689730:intron | 35.0% |
! | TGTTCTTGATGATAACTGTG+TGG | + | chr4_4:56958223-56958242 | Msa0689730:intron | 35.0% |
! | TGATAACTGTGTGGATTTTC+AGG | + | chr4_4:56958232-56958251 | Msa0689730:intron | 35.0% |
GAATAACTAACCAATGCACT+AGG | - | chr4_4:56958371-56958390 | None:intergenic | 35.0% | |
!! | GTGCATGCTAATTGATAATG+AGG | + | chr4_4:56958674-56958693 | Msa0689730:intron | 35.0% |
! | GTTGATGAAACTCACATTTC+AGG | + | chr4_4:56958772-56958791 | Msa0689730:CDS | 35.0% |
ATAAAATGGTTCAAGGGTGA+GGG | + | chr4_4:56959214-56959233 | Msa0689730:intron | 35.0% | |
AGGCAGTGTACAATTTCATT+AGG | + | chr4_4:56959297-56959316 | Msa0689730:intron | 35.0% | |
ACAATTTCATTAGGCATAGC+AGG | + | chr4_4:56959306-56959325 | Msa0689730:intron | 35.0% | |
GTATAAGACAAGGATGACAT+TGG | + | chr4_4:56959369-56959388 | Msa0689730:intron | 35.0% | |
AAGATGATAACATGAGGGAA+AGG | - | chr4_4:56959429-56959448 | None:intergenic | 35.0% | |
ATTCTCGTTGGAAATGTAAC+AGG | + | chr4_4:56959479-56959498 | Msa0689730:intron | 35.0% | |
! | TCTTTGATAAAGCACCTTGA+TGG | - | chr4_4:56959620-56959639 | None:intergenic | 35.0% |
ATGCCATAATTGGAATTTGG+TGG | - | chr4_4:56959761-56959780 | None:intergenic | 35.0% | |
TTATGGCATGATTCTTTAGG+AGG | + | chr4_4:56959772-56959791 | Msa0689730:CDS | 35.0% | |
CACAAATTGTATACCTTGGA+AGG | - | chr4_4:56959832-56959851 | None:intergenic | 35.0% | |
!!! | CTGGAACTCTTCATTTTTTC+TGG | - | chr4_4:56960285-56960304 | None:intergenic | 35.0% |
!! | GAGTTTTTCAGACTCTAACA+GGG | + | chr4_4:56960351-56960370 | Msa0689730:three_prime_UTR | 35.0% |
!! | AGTTTTTCAGACTCTAACAG+GGG | + | chr4_4:56960352-56960371 | Msa0689730:three_prime_UTR | 35.0% |
! | GTTTAGGGTTTAAGGAGAGA+TGG | - | chr4_4:56951417-56951436 | None:intergenic | 40.0% |
CTCACAGATTTCTAAACCTG+TGG | + | chr4_4:56951510-56951529 | Msa0689730:CDS | 40.0% | |
!!! | ATTTGGCACCGAGTTTTGTT+AGG | + | chr4_4:56951599-56951618 | Msa0689730:CDS | 40.0% |
!!! | TTTGGCACCGAGTTTTGTTA+GGG | + | chr4_4:56951600-56951619 | Msa0689730:CDS | 40.0% |
!!! | CCGAGTTTTGTTAGGGATAT+TGG | + | chr4_4:56951607-56951626 | Msa0689730:CDS | 40.0% |
!! | GGATATTGGTGCTGATAAAG+TGG | + | chr4_4:56951621-56951640 | Msa0689730:CDS | 40.0% |
ATTAATGGAGAGAGAGGTCT+AGG | + | chr4_4:56952284-56952303 | Msa0689730:intron | 40.0% | |
TTAATGGAGAGAGAGGTCTA+GGG | + | chr4_4:56952285-56952304 | Msa0689730:intron | 40.0% | |
! | GATTTGTTCTGATGTGTTGC+CGG | - | chr4_4:56952534-56952553 | None:intergenic | 40.0% |
! | CATGTGTGCGACTTTAAAAG+TGG | + | chr4_4:56952553-56952572 | Msa0689730:intron | 40.0% |
GATAAAGACACCTCTTAGCA+TGG | - | chr4_4:56952772-56952791 | None:intergenic | 40.0% | |
CTGAAGACATAGTACTAACC+TGG | - | chr4_4:56952896-56952915 | None:intergenic | 40.0% | |
CAGGTTAGTACTATGTCTTC+AGG | + | chr4_4:56952894-56952913 | Msa0689730:intron | 40.0% | |
TAGTACTATGTCTTCAGGGA+CGG | + | chr4_4:56952899-56952918 | Msa0689730:intron | 40.0% | |
! | ACACTCTTATTTCTTCAGGG+GGG | + | chr4_4:56953417-56953436 | Msa0689730:intron | 40.0% |
GGGCGAGTATGAATTTCTTT+AGG | + | chr4_4:56953437-56953456 | Msa0689730:intron | 40.0% | |
!! | GCAAAGCTTGTTGATGTTGA+TGG | + | chr4_4:56953635-56953654 | Msa0689730:CDS | 40.0% |
CGGTATGCTAAAGATATCCT+TGG | - | chr4_4:56953687-56953706 | None:intergenic | 40.0% | |
!! | GCTCTTCCGAATTTTAGGTA+TGG | + | chr4_4:56954051-56954070 | Msa0689730:intron | 40.0% |
TCGAGCCCATACCTAAAATT+CGG | - | chr4_4:56954060-56954079 | None:intergenic | 40.0% | |
CGGATAGCAAAAATCCATTC+AGG | - | chr4_4:56954112-56954131 | None:intergenic | 40.0% | |
CGCATTACCTTGAACTTCAT+TGG | + | chr4_4:56954197-56954216 | Msa0689730:CDS | 40.0% | |
TTGGCTTAGATTGAAAGTGG+GGG | + | chr4_4:56954404-56954423 | Msa0689730:intron | 40.0% | |
ATATTTCCTTCGCCTTCCTT+TGG | - | chr4_4:56954518-56954537 | None:intergenic | 40.0% | |
TGTTCATGATTCCCATTTGC+AGG | + | chr4_4:56954908-56954927 | Msa0689730:intron | 40.0% | |
TTGCATTCTGTCCTGCAAAT+GGG | - | chr4_4:56954922-56954941 | None:intergenic | 40.0% | |
CAGGACAGAATGCAACTTAA+AGG | + | chr4_4:56954927-56954946 | Msa0689730:intron | 40.0% | |
AGTTGTCATGTGTCATCCAT+CGG | + | chr4_4:56954959-56954978 | Msa0689730:CDS | 40.0% | |
!! | GCTTTTCGAATGTCTAGGAT+TGG | + | chr4_4:56954996-56955015 | Msa0689730:CDS | 40.0% |
!!! | GTCTAGGATTGGTTTTTCTC+AGG | + | chr4_4:56955007-56955026 | Msa0689730:CDS | 40.0% |
TAAAAGACAAAGGTGGTTGC+TGG | - | chr4_4:56955043-56955062 | None:intergenic | 40.0% | |
GTATATTCAGCTTCAAGACG+AGG | + | chr4_4:56955115-56955134 | Msa0689730:intron | 40.0% | |
! | AAATGCATGGAGAAGTGTAG+AGG | + | chr4_4:56955152-56955171 | Msa0689730:CDS | 40.0% |
TCAGATGCTGTATTACGTGA+TGG | + | chr4_4:56955471-56955490 | Msa0689730:intron | 40.0% | |
AACAAGGAGCTATATGCATC+AGG | + | chr4_4:56955592-56955611 | Msa0689730:CDS | 40.0% | |
ACAAGGAGCTATATGCATCA+GGG | + | chr4_4:56955593-56955612 | Msa0689730:CDS | 40.0% | |
ATCAGAGACAGAACGGAATA+AGG | - | chr4_4:56955810-56955829 | None:intergenic | 40.0% | |
GATAAAGAGCCCTTGTTCAT+AGG | + | chr4_4:56955862-56955881 | Msa0689730:CDS | 40.0% | |
TCAAGCAGGCTCTTGAATTT+CGG | + | chr4_4:56956047-56956066 | Msa0689730:intron | 40.0% | |
! | AGTAGAATTGCAGAAAGCAC+AGG | + | chr4_4:56956112-56956131 | Msa0689730:CDS | 40.0% |
! | CTTGATTTCTCTTTGGCTCA+TGG | + | chr4_4:56956367-56956386 | Msa0689730:CDS | 40.0% |
AAAAAGGAGGCTAGGTAAGA+TGG | - | chr4_4:56956406-56956425 | None:intergenic | 40.0% | |
! | AAGCGTTTGCGTCTTATTGA+AGG | + | chr4_4:56956534-56956553 | Msa0689730:CDS | 40.0% |
GTACACTAGACACCTTCAAA+GGG | - | chr4_4:56956563-56956582 | None:intergenic | 40.0% | |
TGTACACTAGACACCTTCAA+AGG | - | chr4_4:56956564-56956583 | None:intergenic | 40.0% | |
! | GTCTTTTGTGTCAATGCTTG+GGG | + | chr4_4:56956631-56956650 | Msa0689730:intron | 40.0% |
TTAGCTAGAAGATGAGGTTC+AGG | - | chr4_4:56956824-56956843 | None:intergenic | 40.0% | |
TCTAGTGGTTGAATGCATGA+TGG | - | chr4_4:56956884-56956903 | None:intergenic | 40.0% | |
ATGGCAGTCTTCAAAAGAAG+TGG | + | chr4_4:56957163-56957182 | Msa0689730:intron | 40.0% | |
TGGCAGTCTTCAAAAGAAGT+GGG | + | chr4_4:56957164-56957183 | Msa0689730:intron | 40.0% | |
TGTCTAGACTAGCAAAACGT+TGG | + | chr4_4:56957577-56957596 | Msa0689730:intron | 40.0% | |
GTCTAGACTAGCAAAACGTT+GGG | + | chr4_4:56957578-56957597 | Msa0689730:intron | 40.0% | |
ATTCTCTGCTTGTTTGGTAG+AGG | + | chr4_4:56957614-56957633 | Msa0689730:CDS | 40.0% | |
AGAAACACACCTCATAAACC+CGG | - | chr4_4:56957712-56957731 | None:intergenic | 40.0% | |
ATTGTGAAACCCCTTACCAA+GGG | - | chr4_4:56957859-56957878 | None:intergenic | 40.0% | |
AATTGTGAAACCCCTTACCA+AGG | - | chr4_4:56957860-56957879 | None:intergenic | 40.0% | |
TTGGTAAGGGGTTTCACAAT+TGG | + | chr4_4:56957859-56957878 | Msa0689730:intron | 40.0% | |
TGGTAAGGGGTTTCACAATT+GGG | + | chr4_4:56957860-56957879 | Msa0689730:intron | 40.0% | |
TTCACAATTGGGTGTGAAGT+TGG | + | chr4_4:56957871-56957890 | Msa0689730:intron | 40.0% | |
TCACAATTGGGTGTGAAGTT+GGG | + | chr4_4:56957872-56957891 | Msa0689730:intron | 40.0% | |
TTGGGACATACAATTACCCA+AGG | + | chr4_4:56957890-56957909 | Msa0689730:intron | 40.0% | |
CAAATAAGGATGCTCAGTTC+TGG | - | chr4_4:56957919-56957938 | None:intergenic | 40.0% | |
TGGATTATCACCTAGTGCAT+TGG | + | chr4_4:56958358-56958377 | Msa0689730:CDS | 40.0% | |
GATGAAACTCACATTTCAGG+AGG | + | chr4_4:56958775-56958794 | Msa0689730:CDS | 40.0% | |
CTCACATTTCAGGAGGAAAT+TGG | + | chr4_4:56958782-56958801 | Msa0689730:CDS | 40.0% | |
AGGAAATTGGTCCATACAGA+TGG | + | chr4_4:56958795-56958814 | Msa0689730:CDS | 40.0% | |
GGAAATTGGTCCATACAGAT+GGG | + | chr4_4:56958796-56958815 | Msa0689730:CDS | 40.0% | |
CAATTTACCTCCCATCTGTA+TGG | - | chr4_4:56958809-56958828 | None:intergenic | 40.0% | |
TGCAATCATTCTTCTCCACA+AGG | + | chr4_4:56958957-56958976 | Msa0689730:CDS | 40.0% | |
GATATGCAAGTTTGTCCTTG+TGG | - | chr4_4:56958975-56958994 | None:intergenic | 40.0% | |
ACAAACTTGCATATCCTCAG+CGG | + | chr4_4:56958980-56958999 | Msa0689730:CDS | 40.0% | |
CTTCTCTTCTCATCAGAAGT+TGG | + | chr4_4:56959003-56959022 | Msa0689730:CDS | 40.0% | |
! | TTCTCATCAGAAGTTGGTCA+TGG | + | chr4_4:56959009-56959028 | Msa0689730:intron | 40.0% |
! | ATCAGAAGTTGGTCATGGTA+TGG | + | chr4_4:56959014-56959033 | Msa0689730:intron | 40.0% |
CATAAAATGGTTCAAGGGTG+AGG | + | chr4_4:56959213-56959232 | Msa0689730:intron | 40.0% | |
TAAAATGGTTCAAGGGTGAG+GGG | + | chr4_4:56959215-56959234 | Msa0689730:intron | 40.0% | |
ACAGGAACACAAGTTGCTAA+AGG | + | chr4_4:56959497-56959516 | Msa0689730:intron | 40.0% | |
CTTTAGGCAACAAAAAGGGT+TGG | - | chr4_4:56959541-56959560 | None:intergenic | 40.0% | |
TGCCTAAAGATTTGAAGGGT+AGG | + | chr4_4:56959552-56959571 | Msa0689730:CDS | 40.0% | |
CTAAAGATTTGAAGGGTAGG+CGG | + | chr4_4:56959555-56959574 | Msa0689730:CDS | 40.0% | |
TGGTAGACTTTGATCCATCA+AGG | + | chr4_4:56959603-56959622 | Msa0689730:CDS | 40.0% | |
CTCGTATTGTTTCCATTTGG+TGG | + | chr4_4:56959682-56959701 | Msa0689730:intron | 40.0% | |
GATCAGAAGATCCATTTGCA+TGG | - | chr4_4:56959931-56959950 | None:intergenic | 40.0% | |
TTCAATGAAGCGGAAACAAG+AGG | + | chr4_4:56959969-56959988 | Msa0689730:intron | 40.0% | |
CTAAAAGCTGTAGGTGAAGT+TGG | + | chr4_4:56960027-56960046 | Msa0689730:CDS | 40.0% | |
CTGTAGGTGAAGTTGGAAAA+GGG | + | chr4_4:56960034-56960053 | Msa0689730:CDS | 40.0% | |
TATACTTTCTCAAGCCACCA+AGG | + | chr4_4:56960070-56960089 | Msa0689730:CDS | 40.0% | |
TGATTGTAGTATGATCGGTC+CGG | + | chr4_4:56960191-56960210 | Msa0689730:three_prime_UTR | 40.0% | |
GCACAAGAGTTTGTGTAGAT+TGG | + | chr4_4:56960218-56960237 | Msa0689730:three_prime_UTR | 40.0% | |
!! | CGAGTTTTTCAGACTCTAAC+AGG | + | chr4_4:56960350-56960369 | Msa0689730:three_prime_UTR | 40.0% |
AGAATGGCACGATAGAGTAG+AGG | - | chr4_4:56951267-56951286 | None:intergenic | 45.0% | |
TGTGACTGGAGTGACAGTAT+GGG | - | chr4_4:56951377-56951396 | None:intergenic | 45.0% | |
! | GTGATGAAAGTGTGTGTGAC+TGG | - | chr4_4:56951391-56951410 | None:intergenic | 45.0% |
TAGGGTTTAAGGAGAGATGG+CGG | - | chr4_4:56951414-56951433 | None:intergenic | 45.0% | |
GTCGATGGAAGATTGGATAG+CGG | - | chr4_4:56951548-56951567 | None:intergenic | 45.0% | |
GGATTTCGTCGATGGAAGAT+TGG | - | chr4_4:56951555-56951574 | None:intergenic | 45.0% | |
GTTATCAGGGATTTCGTCGA+TGG | - | chr4_4:56951563-56951582 | None:intergenic | 45.0% | |
ACTCTACAGAGAGTCTTGCT+AGG | + | chr4_4:56951689-56951708 | Msa0689730:CDS | 45.0% | |
! | TCTAGGGTCCTTGCTTCAAT+AGG | + | chr4_4:56952301-56952320 | Msa0689730:intron | 45.0% |
!! | ACCCGGATTAGTCGGTAATT+GGG | + | chr4_4:56952351-56952370 | Msa0689730:intron | 45.0% |
! | AGCCCAATTACCGACTAATC+CGG | - | chr4_4:56952356-56952375 | None:intergenic | 45.0% |
CGGATCACAAATGACCAAAC+GGG | - | chr4_4:56952514-56952533 | None:intergenic | 45.0% | |
CCGGATCACAAATGACCAAA+CGG | - | chr4_4:56952515-56952534 | None:intergenic | 45.0% | |
CCGTTTGGTCATTTGTGATC+CGG | + | chr4_4:56952512-56952531 | Msa0689730:intron | 45.0% | |
ACTACAGGTACCATGCTAAG+AGG | + | chr4_4:56952759-56952778 | Msa0689730:CDS | 45.0% | |
! | GAGGTGTCTTTATCTCTGCT+TGG | + | chr4_4:56952778-56952797 | Msa0689730:CDS | 45.0% |
CCTGGATACACAATCAGTAC+AGG | - | chr4_4:56952878-56952897 | None:intergenic | 45.0% | |
!! | CCTGTACTGATTGTGTATCC+AGG | + | chr4_4:56952875-56952894 | Msa0689730:CDS | 45.0% |
ATGTACCAAGTGACGTGGAA+AGG | + | chr4_4:56953300-56953319 | Msa0689730:intron | 45.0% | |
CAATTCCTTTCCACGTCACT+TGG | - | chr4_4:56953308-56953327 | None:intergenic | 45.0% | |
AATGCCAAGACATACAGGGA+CGG | - | chr4_4:56953550-56953569 | None:intergenic | 45.0% | |
GAGAATTATTCCATCGGCCA+AGG | + | chr4_4:56953667-56953686 | Msa0689730:CDS | 45.0% | |
CTAAAGATATCCTTGGCCGA+TGG | - | chr4_4:56953680-56953699 | None:intergenic | 45.0% | |
TGGATGGAAGCAACTAAGAG+AGG | + | chr4_4:56953931-56953950 | Msa0689730:CDS | 45.0% | |
! | ATGCCGCTCTTCCGAATTTT+AGG | + | chr4_4:56954046-56954065 | Msa0689730:intron | 45.0% |
! | GGAGTTTGCGTGCCATATTT+TGG | + | chr4_4:56954282-56954301 | Msa0689730:intron | 45.0% |
TGGCTTAGATTGAAAGTGGG+GGG | + | chr4_4:56954405-56954424 | Msa0689730:intron | 45.0% | |
TCGAGGTCTCTACTTTCCAA+AGG | + | chr4_4:56954499-56954518 | Msa0689730:CDS | 45.0% | |
GGTCTCTACTTTCCAAAGGA+AGG | + | chr4_4:56954503-56954522 | Msa0689730:CDS | 45.0% | |
TACTTTCCAAAGGAAGGCGA+AGG | + | chr4_4:56954509-56954528 | Msa0689730:CDS | 45.0% | |
GGATATCAGGACAATCACAG+TGG | - | chr4_4:56954619-56954638 | None:intergenic | 45.0% | |
TTCAATCACTTGCACCACGA+CGG | + | chr4_4:56954792-56954811 | Msa0689730:intron | 45.0% | |
GTTGCATTCTGTCCTGCAAA+TGG | - | chr4_4:56954923-56954942 | None:intergenic | 45.0% | |
GATGGATGACACATGACAAC+TGG | - | chr4_4:56954960-56954979 | None:intergenic | 45.0% | |
GTTGTCATGTGTCATCCATC+GGG | + | chr4_4:56954960-56954979 | Msa0689730:CDS | 45.0% | |
TTGTCATGTGTCATCCATCG+GGG | + | chr4_4:56954961-56954980 | Msa0689730:CDS | 45.0% | |
TGAATGCTGGAGATTGTACG+AGG | + | chr4_4:56955630-56955649 | Msa0689730:CDS | 45.0% | |
ATACATCATTCACGCTCCAC+TGG | - | chr4_4:56955735-56955754 | None:intergenic | 45.0% | |
AGTGGAGCGTGAATGATGTA+TGG | + | chr4_4:56955734-56955753 | Msa0689730:intron | 45.0% | |
! | AATTGCAGAAAGCACAGGTG+AGG | + | chr4_4:56956117-56956136 | Msa0689730:intron | 45.0% |
! | GCGTAGTTTTCTTGTCTTGC+TGG | + | chr4_4:56956185-56956204 | Msa0689730:intron | 45.0% |
GGGAATGTCAGAAATGGGAA+AGG | + | chr4_4:56956257-56956276 | Msa0689730:CDS | 45.0% | |
TCGGCATCTATCTCTATCCA+AGG | + | chr4_4:56956318-56956337 | Msa0689730:CDS | 45.0% | |
TGGGGTAAAAAAAGGAGGCT+AGG | - | chr4_4:56956414-56956433 | None:intergenic | 45.0% | |
! | ACACTCTGGAAATTTGCTCG+AGG | + | chr4_4:56956494-56956513 | Msa0689730:CDS | 45.0% |
TATTGAAGGCCTCCCTTTGA+AGG | + | chr4_4:56956548-56956567 | Msa0689730:CDS | 45.0% | |
AGTGTACAGCCTTTAGACTC+TGG | + | chr4_4:56956576-56956595 | Msa0689730:CDS | 45.0% | |
CTAGAAGATGAGGTTCAGGA+GGG | - | chr4_4:56956820-56956839 | None:intergenic | 45.0% | |
GGTATGACATTATGCTCCAG+TGG | + | chr4_4:56956916-56956935 | Msa0689730:intron | 45.0% | |
GTCAATTCATTGAGCACCAC+TGG | - | chr4_4:56956935-56956954 | None:intergenic | 45.0% | |
GTTCTCTCTTTACAGCTGGA+AGG | + | chr4_4:56956987-56957006 | Msa0689730:intron | 45.0% | |
CTCTTTACAGCTGGAAGGTT+CGG | + | chr4_4:56956992-56957011 | Msa0689730:intron | 45.0% | |
TCTTTACAGCTGGAAGGTTC+GGG | + | chr4_4:56956993-56957012 | Msa0689730:intron | 45.0% | |
GGCAGTCTTCAAAAGAAGTG+GGG | + | chr4_4:56957165-56957184 | Msa0689730:intron | 45.0% | |
GCAGTCTTCAAAAGAAGTGG+GGG | + | chr4_4:56957166-56957185 | Msa0689730:intron | 45.0% | |
GATGTGGATGTGCTAATGTC+AGG | + | chr4_4:56957213-56957232 | Msa0689730:CDS | 45.0% | |
!! | CAGGGAGCATTAAATGGCAA+AGG | - | chr4_4:56957678-56957697 | None:intergenic | 45.0% |
GACATTCCCACGAGAAAATC+AGG | - | chr4_4:56957803-56957822 | None:intergenic | 45.0% | |
! | TCTCATTACCACGGTTGATG+TGG | + | chr4_4:56957828-56957847 | Msa0689730:intron | 45.0% |
GGACATACAATTACCCAAGG+AGG | + | chr4_4:56957893-56957912 | Msa0689730:intron | 45.0% | |
CATAGTTTGAGAGCAACTGC+AGG | - | chr4_4:56958001-56958020 | None:intergenic | 45.0% | |
GAGAGAATGAGCAAGCTGTA+GGG | + | chr4_4:56958285-56958304 | Msa0689730:CDS | 45.0% | |
ACTGTAGCCAAGAACATCAC+TGG | - | chr4_4:56958311-56958330 | None:intergenic | 45.0% | |
! | ATGATAAAGCATCTGAGGCC+TGG | + | chr4_4:56958333-56958352 | Msa0689730:CDS | 45.0% |
ACTAGGTGATAATCCAGTCC+AGG | - | chr4_4:56958354-56958373 | None:intergenic | 45.0% | |
AATTGGTCCATACAGATGGG+AGG | + | chr4_4:56958799-56958818 | Msa0689730:CDS | 45.0% | |
TTGCTTATGTTAGTGACCGG+AGG | + | chr4_4:56959166-56959185 | Msa0689730:intron | 45.0% | |
TGCTTATGTTAGTGACCGGA+GGG | + | chr4_4:56959167-56959186 | Msa0689730:intron | 45.0% | |
ATTCTGCAAACTACACCCTC+CGG | - | chr4_4:56959185-56959204 | None:intergenic | 45.0% | |
AAAATGGTTCAAGGGTGAGG+GGG | + | chr4_4:56959216-56959235 | Msa0689730:intron | 45.0% | |
CAAGTTGCTAAAGGACATGC+TGG | + | chr4_4:56959506-56959525 | Msa0689730:CDS | 45.0% | |
CGCCTACCCTTCAAATCTTT+AGG | - | chr4_4:56959557-56959576 | None:intergenic | 45.0% | |
GTAAAGAGGATGCCACCAAA+TGG | - | chr4_4:56959697-56959716 | None:intergenic | 45.0% | |
GGAGAAATCGTATCCTTCCA+AGG | + | chr4_4:56959816-56959835 | Msa0689730:CDS | 45.0% | |
GCTGTAGGTGAAGTTGGAAA+AGG | + | chr4_4:56960033-56960052 | Msa0689730:CDS | 45.0% | |
!! | CTTTAATTTGCGAGCCTTGG+TGG | - | chr4_4:56960087-56960106 | None:intergenic | 45.0% |
!! | CGACTTTAATTTGCGAGCCT+TGG | - | chr4_4:56960090-56960109 | None:intergenic | 45.0% |
CACAAACTCTTGTGCTCTAC+CGG | - | chr4_4:56960213-56960232 | None:intergenic | 45.0% | |
GTAACCGGAGAAGAATTGCG+CGG | - | chr4_4:56951316-56951335 | None:intergenic | 50.0% | |
GTGTGACTGGAGTGACAGTA+TGG | - | chr4_4:56951378-56951397 | None:intergenic | 50.0% | |
AGGGTTTAAGGAGAGATGGC+GGG | - | chr4_4:56951413-56951432 | None:intergenic | 50.0% | |
! | GGAAGATTGGATAGCGGCAA+TGG | - | chr4_4:56951542-56951561 | None:intergenic | 50.0% |
AACGGGGTCCTATTGAAGCA+AGG | - | chr4_4:56952312-56952331 | None:intergenic | 50.0% | |
CAATAGGACCCCGTTAGTGA+CGG | + | chr4_4:56952317-56952336 | Msa0689730:intron | 50.0% | |
ACCAATCCCACCGTCACTAA+CGG | - | chr4_4:56952330-56952349 | None:intergenic | 50.0% | |
!! | GATTGGTCACCCGGATTAGT+CGG | + | chr4_4:56952343-56952362 | Msa0689730:intron | 50.0% |
!! | CACCCGGATTAGTCGGTAAT+TGG | + | chr4_4:56952350-56952369 | Msa0689730:intron | 50.0% |
! | GCCCAATTACCGACTAATCC+GGG | - | chr4_4:56952355-56952374 | None:intergenic | 50.0% |
!! | GGATTAGTCGGTAATTGGGC+TGG | + | chr4_4:56952355-56952374 | Msa0689730:intron | 50.0% |
!! | ACAGGAGTGCTTCCATGAGA+AGG | + | chr4_4:56952727-56952746 | Msa0689730:intron | 50.0% |
CTTTCGAGCTTCGTTCTGCA+GGG | - | chr4_4:56952855-56952874 | None:intergenic | 50.0% | |
AGCAAGGTGTGCCAGTATGA+CGG | - | chr4_4:56954132-56954151 | None:intergenic | 50.0% | |
TACTGGCACACCTTGCTTCT+AGG | + | chr4_4:56954135-56954154 | Msa0689730:CDS | 50.0% | |
TATGGCACGCAAACTCCCTA+TGG | - | chr4_4:56954279-56954298 | None:intergenic | 50.0% | |
GGCTTAGATTGAAAGTGGGG+GGG | + | chr4_4:56954406-56954425 | Msa0689730:intron | 50.0% | |
TTGCAGCCACTTCAGAGACA+TGG | + | chr4_4:56954474-56954493 | Msa0689730:intron | 50.0% | |
! | TCGACTCCATGTCTCTGAAG+TGG | - | chr4_4:56954483-56954502 | None:intergenic | 50.0% |
ACTTCAGAGACATGGAGTCG+AGG | + | chr4_4:56954482-56954501 | Msa0689730:CDS | 50.0% | |
CACCACGACGGATCAATCTT+GGG | + | chr4_4:56954804-56954823 | Msa0689730:intron | 50.0% | |
AACCCAAGATTGATCCGTCG+TGG | - | chr4_4:56954809-56954828 | None:intergenic | 50.0% | |
TGTCATGTGTCATCCATCGG+GGG | + | chr4_4:56954962-56954981 | Msa0689730:CDS | 50.0% | |
!! | TCCATCGGGGGCATTCAATT+TGG | + | chr4_4:56954974-56954993 | Msa0689730:CDS | 50.0% |
! | TGCATGGAGAAGTGTAGAGG+TGG | + | chr4_4:56955155-56955174 | Msa0689730:CDS | 50.0% |
! | ATGGAGAAGTGTAGAGGTGG+TGG | + | chr4_4:56955158-56955177 | Msa0689730:CDS | 50.0% |
!! | GTGTAGAGGTGGTGGATTTG+AGG | + | chr4_4:56955166-56955185 | Msa0689730:CDS | 50.0% |
GGAGAAATGCACAATGCCAG+TGG | + | chr4_4:56955716-56955735 | Msa0689730:CDS | 50.0% | |
! | CACAGGTGAGGCATCTATTG+TGG | + | chr4_4:56956129-56956148 | Msa0689730:intron | 50.0% |
TAGCCGAGCATGTGCTTAGT+CGG | + | chr4_4:56956299-56956318 | Msa0689730:CDS | 50.0% | |
! | ATGCCGACTAAGCACATGCT+CGG | - | chr4_4:56956305-56956324 | None:intergenic | 50.0% |
!! | TCTTTGGCTCATGGTGCTGT+AGG | + | chr4_4:56956376-56956395 | Msa0689730:CDS | 50.0% |
GAGTGTGCTATCGGATCTGT+GGG | - | chr4_4:56956480-56956499 | None:intergenic | 50.0% | |
AGAGTGTGCTATCGGATCTG+TGG | - | chr4_4:56956481-56956500 | None:intergenic | 50.0% | |
ACAGATCCGATAGCACACTC+TGG | + | chr4_4:56956480-56956499 | Msa0689730:intron | 50.0% | |
CACTAGACACCTTCAAAGGG+AGG | - | chr4_4:56956560-56956579 | None:intergenic | 50.0% | |
GCTAGAAGATGAGGTTCAGG+AGG | - | chr4_4:56956821-56956840 | None:intergenic | 50.0% | |
CTTTACAGCTGGAAGGTTCG+GGG | + | chr4_4:56956994-56957013 | Msa0689730:intron | 50.0% | |
GATGACATGCACTGCAACTG+AGG | + | chr4_4:56957188-56957207 | Msa0689730:CDS | 50.0% | |
CACTGCAACTGAGGATGATG+TGG | + | chr4_4:56957197-56957216 | Msa0689730:CDS | 50.0% | |
CTCTGCTTGTTTGGTAGAGG+AGG | + | chr4_4:56957617-56957636 | Msa0689730:CDS | 50.0% | |
! | AGAGGAGGCCATTGAGCTTT+TGG | + | chr4_4:56957632-56957651 | Msa0689730:CDS | 50.0% |
CATTTAATGCTCCCTGCTCG+CGG | + | chr4_4:56957682-56957701 | Msa0689730:CDS | 50.0% | |
ATGTGGCCATTCCCTTGGTA+AGG | + | chr4_4:56957845-56957864 | Msa0689730:intron | 50.0% | |
TGTGGCCATTCCCTTGGTAA+GGG | + | chr4_4:56957846-56957865 | Msa0689730:intron | 50.0% | |
GAAACCCCTTACCAAGGGAA+TGG | - | chr4_4:56957854-56957873 | None:intergenic | 50.0% | |
AATGACTTGAGCCCGAGTGA+TGG | + | chr4_4:56958056-56958075 | Msa0689730:CDS | 50.0% | |
GGAGAGAATGAGCAAGCTGT+AGG | + | chr4_4:56958284-56958303 | Msa0689730:CDS | 50.0% | |
TGTAGGGCCAGTGATGTTCT+TGG | + | chr4_4:56958301-56958320 | Msa0689730:CDS | 50.0% | |
! | TCTTTAGGAGGCGATGCCAT+CGG | + | chr4_4:56959784-56959803 | Msa0689730:CDS | 50.0% |
GATACGATTTCTCCCACGTC+AGG | - | chr4_4:56959810-56959829 | None:intergenic | 50.0% | |
GAAGCGGAAACAAGAGGAAG+TGG | + | chr4_4:56959975-56959994 | Msa0689730:intron | 50.0% | |
CAAGAGGAAGTGGTCGAGAA+AGG | + | chr4_4:56959985-56960004 | Msa0689730:CDS | 50.0% | |
TCGAGAAAGGATACGACCCT+CGG | + | chr4_4:56959998-56960017 | Msa0689730:CDS | 50.0% | |
! | CAGCTTTTAGCACCTTCCGA+GGG | - | chr4_4:56960017-56960036 | None:intergenic | 50.0% |
! | ACAGCTTTTAGCACCTTCCG+AGG | - | chr4_4:56960018-56960037 | None:intergenic | 50.0% |
!! | CGGAAGGTGCTAAAAGCTGT+AGG | + | chr4_4:56960018-56960037 | Msa0689730:CDS | 50.0% |
!! | AGCGTATGGTGGCGGAAGAA+TGG | - | chr4_4:56951283-56951302 | None:intergenic | 55.0% |
! | GAACTGGAAGCGTATGGTGG+CGG | - | chr4_4:56951291-56951310 | None:intergenic | 55.0% |
! | GCTGAACTGGAAGCGTATGG+TGG | - | chr4_4:56951294-56951313 | None:intergenic | 55.0% |
GAAGAATTGCGCGGCTGAAC+TGG | - | chr4_4:56951307-56951326 | None:intergenic | 55.0% | |
TCAGCCGCGCAATTCTTCTC+CGG | + | chr4_4:56951309-56951328 | Msa0689730:five_prime_UTR | 55.0% | |
GCAGTCGGTTAGGGTGTAAC+CGG | - | chr4_4:56951331-56951350 | None:intergenic | 55.0% | |
GACTGGAGTGACAGTATGGG+CGG | - | chr4_4:56951374-56951393 | None:intergenic | 55.0% | |
CAATCCCACCGTCACTAACG+GGG | - | chr4_4:56952328-56952347 | None:intergenic | 55.0% | |
CCAATCCCACCGTCACTAAC+GGG | - | chr4_4:56952329-56952348 | None:intergenic | 55.0% | |
GCTTTCGAGCTTCGTTCTGC+AGG | - | chr4_4:56952856-56952875 | None:intergenic | 55.0% | |
AGCTCCGTCCCTGTATGTCT+TGG | + | chr4_4:56953543-56953562 | Msa0689730:intron | 55.0% | |
GCACCACGACGGATCAATCT+TGG | + | chr4_4:56954803-56954822 | Msa0689730:intron | 55.0% | |
GCCAAATTGAATGCCCCCGA+TGG | - | chr4_4:56954978-56954997 | None:intergenic | 55.0% | |
!! | CGCGAGCAGGGAGCATTAAA+TGG | - | chr4_4:56957684-56957703 | None:intergenic | 55.0% |
! | GGTTGATGTGGCCATTCCCT+TGG | + | chr4_4:56957840-56957859 | Msa0689730:intron | 55.0% |
GTGGCCATTCCCTTGGTAAG+GGG | + | chr4_4:56957847-56957866 | Msa0689730:intron | 55.0% | |
! | TGCTCAGTTCTGGCCTCCTT+GGG | - | chr4_4:56957909-56957928 | None:intergenic | 55.0% |
! | ATGCTCAGTTCTGGCCTCCT+TGG | - | chr4_4:56957910-56957929 | None:intergenic | 55.0% |
! | AAAGCATCTGAGGCCTGGAC+TGG | + | chr4_4:56958338-56958357 | Msa0689730:CDS | 55.0% |
GATGAGAAGAGAAGCCGCTG+AGG | - | chr4_4:56958997-56959016 | None:intergenic | 55.0% | |
TCAAGGGTGAGGGGGTTCAA+TGG | + | chr4_4:56959224-56959243 | Msa0689730:intron | 55.0% | |
GTGAGGGGGTTCAATGGTGA+GGG | + | chr4_4:56959230-56959249 | Msa0689730:intron | 55.0% | |
TGAGGGGGTTCAATGGTGAG+GGG | + | chr4_4:56959231-56959250 | Msa0689730:intron | 55.0% | |
GAAAGGATACGACCCTCGGA+AGG | + | chr4_4:56960002-56960021 | Msa0689730:CDS | 55.0% | |
CCTCTCCCACCTTCAGAGTT+CGG | + | chr4_4:56960255-56960274 | Msa0689730:three_prime_UTR | 55.0% | |
! | GCGGCTGAACTGGAAGCGTA+TGG | - | chr4_4:56951297-56951316 | None:intergenic | 60.0% |
GAGACGGAGGCAGTCGGTTA+GGG | - | chr4_4:56951340-56951359 | None:intergenic | 60.0% | |
TAACCGACTGCCTCCGTCTC+CGG | + | chr4_4:56951340-56951359 | Msa0689730:five_prime_UTR | 60.0% | |
TAGGACCCCGTTAGTGACGG+TGG | + | chr4_4:56952320-56952339 | Msa0689730:intron | 60.0% | |
AGGACCCCGTTAGTGACGGT+GGG | + | chr4_4:56952321-56952340 | Msa0689730:intron | 60.0% | |
CCCGTTAGTGACGGTGGGAT+TGG | + | chr4_4:56952326-56952345 | Msa0689730:intron | 60.0% | |
!! | TGACGGTGGGATTGGTCACC+CGG | + | chr4_4:56952334-56952353 | Msa0689730:intron | 60.0% |
CGCGGATCACCGGGTTTATG+AGG | + | chr4_4:56957700-56957719 | Msa0689730:CDS | 60.0% | |
GGGAATGGCCACATCAACCG+TGG | - | chr4_4:56957839-56957858 | None:intergenic | 60.0% | |
GGTGAGGGGGTTCAATGGTG+AGG | + | chr4_4:56959229-56959248 | Msa0689730:intron | 60.0% | |
GAGGGGGTTCAATGGTGAGG+GGG | + | chr4_4:56959232-56959251 | Msa0689730:intron | 60.0% | |
TTTGAAGGGTAGGCGGCCAG+AGG | + | chr4_4:56959562-56959581 | Msa0689730:CDS | 60.0% | |
TTTCTCCCACGTCAGGCCGA+TGG | - | chr4_4:56959803-56959822 | None:intergenic | 60.0% | |
! | CCGAACTCTGAAGGTGGGAG+AGG | - | chr4_4:56960258-56960277 | None:intergenic | 60.0% |
! | GGCTGCCGAACTCTGAAGGT+GGG | - | chr4_4:56960263-56960282 | None:intergenic | 60.0% |
TCTGGGCTGCCGAACTCTGA+AGG | - | chr4_4:56960267-56960286 | None:intergenic | 60.0% | |
GGAGACGGAGGCAGTCGGTT+AGG | - | chr4_4:56951341-56951360 | None:intergenic | 65.0% | |
TCACCGGAGACGGAGGCAGT+CGG | - | chr4_4:56951346-56951365 | None:intergenic | 65.0% | |
AGTATGGGCGGCAGCGTCAC+CGG | - | chr4_4:56951362-56951381 | None:intergenic | 65.0% | |
GCGGCAATGGCGTCATCCAC+AGG | - | chr4_4:56951529-56951548 | None:intergenic | 65.0% | |
AGCTGGAAGGTTCGGGGCAC+TGG | + | chr4_4:56957000-56957019 | Msa0689730:intron | 65.0% | |
!! | AGGTTCGGGGCACTGGCCAA+TGG | + | chr4_4:56957007-56957026 | Msa0689730:CDS | 65.0% |
AACCCGGTGATCCGCGAGCA+GGG | - | chr4_4:56957696-56957715 | None:intergenic | 65.0% | |
AAACCCGGTGATCCGCGAGC+AGG | - | chr4_4:56957697-56957716 | None:intergenic | 65.0% | |
CGATGCCATCGGCCTGACGT+GGG | + | chr4_4:56959795-56959814 | Msa0689730:CDS | 65.0% | |
! | GGGCTGCCGAACTCTGAAGG+TGG | - | chr4_4:56960264-56960283 | None:intergenic | 65.0% |
GCTCCCTGCTCGCGGATCAC+CGG | + | chr4_4:56957690-56957709 | Msa0689730:CDS | 70.0% | |
CTCCCTGCTCGCGGATCACC+GGG | + | chr4_4:56957691-56957710 | Msa0689730:CDS | 70.0% | |
GCGATGCCATCGGCCTGACG+TGG | + | chr4_4:56959794-56959813 | Msa0689730:CDS | 70.0% | |
GGCAGCGTCACCGGAGACGG+AGG | - | chr4_4:56951353-56951372 | None:intergenic | 75.0% | |
GGCGGCAGCGTCACCGGAGA+CGG | - | chr4_4:56951356-56951375 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_4 | gene | 56951244 | 56960455 | 56951244 | ID=Msa0689730;Name=Msa0689730 |
chr4_4 | mRNA | 56951244 | 56960455 | 56951244 | ID=Msa0689730-mRNA-1;Parent=Msa0689730;Name=Msa0689730-mRNA-1;_AED=0.11;_eAED=0.11;_QI=210|0.91|0.92|1|1|1|25|351|1055 |
chr4_4 | exon | 56951244 | 56951750 | 56951244 | ID=Msa0689730-mRNA-1:exon:15135;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56952731 | 56952896 | 56952731 | ID=Msa0689730-mRNA-1:exon:15136;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56953633 | 56953749 | 56953633 | ID=Msa0689730-mRNA-1:exon:15137;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56953837 | 56953970 | 56953837 | ID=Msa0689730-mRNA-1:exon:15138;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56954068 | 56954218 | 56954068 | ID=Msa0689730-mRNA-1:exon:15139;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56954480 | 56954580 | 56954480 | ID=Msa0689730-mRNA-1:exon:15140;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56954930 | 56955028 | 56954930 | ID=Msa0689730-mRNA-1:exon:15141;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56955125 | 56955240 | 56955125 | ID=Msa0689730-mRNA-1:exon:15142;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56955576 | 56955750 | 56955576 | ID=Msa0689730-mRNA-1:exon:15143;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56955847 | 56955957 | 56955847 | ID=Msa0689730-mRNA-1:exon:15144;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56956055 | 56956133 | 56956055 | ID=Msa0689730-mRNA-1:exon:15145;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56956254 | 56956397 | 56956254 | ID=Msa0689730-mRNA-1:exon:15146;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56956484 | 56956597 | 56956484 | ID=Msa0689730-mRNA-1:exon:15147;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56956795 | 56956916 | 56956795 | ID=Msa0689730-mRNA-1:exon:15148;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56957002 | 56957084 | 56957002 | ID=Msa0689730-mRNA-1:exon:15149;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56957170 | 56957291 | 56957170 | ID=Msa0689730-mRNA-1:exon:15150;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56957381 | 56957501 | 56957381 | ID=Msa0689730-mRNA-1:exon:15151;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56957584 | 56957721 | 56957584 | ID=Msa0689730-mRNA-1:exon:15152;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56957995 | 56958091 | 56957995 | ID=Msa0689730-mRNA-1:exon:15153;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56958254 | 56958379 | 56958254 | ID=Msa0689730-mRNA-1:exon:15154;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56958728 | 56958820 | 56958728 | ID=Msa0689730-mRNA-1:exon:15155;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56958925 | 56959024 | 56958925 | ID=Msa0689730-mRNA-1:exon:15156;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56959501 | 56959646 | 56959501 | ID=Msa0689730-mRNA-1:exon:15157;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56959748 | 56959837 | 56959748 | ID=Msa0689730-mRNA-1:exon:15158;Parent=Msa0689730-mRNA-1 |
chr4_4 | exon | 56959979 | 56960455 | 56959979 | ID=Msa0689730-mRNA-1:exon:15159;Parent=Msa0689730-mRNA-1 |
chr4_4 | five_prime_UTR | 56951244 | 56951453 | 56951244 | ID=Msa0689730-mRNA-1:five_prime_utr;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56951454 | 56951750 | 56951454 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56952731 | 56952896 | 56952731 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56953633 | 56953749 | 56953633 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56953837 | 56953970 | 56953837 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56954068 | 56954218 | 56954068 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56954480 | 56954580 | 56954480 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56954930 | 56955028 | 56954930 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56955125 | 56955240 | 56955125 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56955576 | 56955750 | 56955576 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56955847 | 56955957 | 56955847 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56956055 | 56956133 | 56956055 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56956254 | 56956397 | 56956254 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56956484 | 56956597 | 56956484 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56956795 | 56956916 | 56956795 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56957002 | 56957084 | 56957002 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56957170 | 56957291 | 56957170 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56957381 | 56957501 | 56957381 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56957584 | 56957721 | 56957584 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56957995 | 56958091 | 56957995 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56958254 | 56958379 | 56958254 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56958728 | 56958820 | 56958728 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56958925 | 56959024 | 56958925 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56959501 | 56959646 | 56959501 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56959748 | 56959837 | 56959748 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | CDS | 56959979 | 56960104 | 56959979 | ID=Msa0689730-mRNA-1:cds;Parent=Msa0689730-mRNA-1 |
chr4_4 | three_prime_UTR | 56960105 | 56960455 | 56960105 | ID=Msa0689730-mRNA-1:three_prime_utr;Parent=Msa0689730-mRNA-1 |
Gene Sequence |
Protein sequence |