Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333010 | XP_003609773.1 | 90.656 | 1113 | 91 | 3 | 1 | 1103 | 1 | 1110 | 0.0 | 2022 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333010 | sp|F4JC20|FIPS3_ARATH | 29.572 | 257 | 94 | 5 | 52 | 303 | 82 | 256 | 5.74e-21 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333010 | G7JNW3 | 90.656 | 1113 | 91 | 3 | 1 | 1103 | 1 | 1110 | 0.0 | 2022 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032090 | Msa1333010 | 0.809470 | 1.862266e-50 | -8.615850e-47 |
| Msa0032430 | Msa1333010 | 0.815249 | 1.018602e-51 | -8.615850e-47 |
| Msa0033130 | Msa1333010 | 0.810900 | 9.156364e-51 | -8.615850e-47 |
| Msa0099220 | Msa1333010 | 0.809768 | 1.607235e-50 | -8.615850e-47 |
| Msa0689260 | Msa1333010 | 0.800583 | 1.346569e-48 | -8.615850e-47 |
| Msa0689730 | Msa1333010 | 0.804033 | 2.622941e-49 | -8.615850e-47 |
| Msa0716830 | Msa1333010 | 0.813174 | 2.924519e-51 | -8.615850e-47 |
| Msa0137550 | Msa1333010 | 0.819564 | 1.086796e-52 | -8.615850e-47 |
| Msa0144370 | Msa1333010 | 0.809052 | 2.289726e-50 | -8.615850e-47 |
| Msa0172070 | Msa1333010 | 0.817144 | 3.840598e-52 | -8.615850e-47 |
| Msa1300380 | Msa1333010 | 0.807269 | 5.488287e-50 | -8.615850e-47 |
| Msa1333010 | Msa1358250 | 0.806939 | 6.445999e-50 | -8.615850e-47 |
| Msa1333010 | Msa1403420 | 0.820062 | 8.364541e-53 | -8.615850e-47 |
| Msa1333010 | Msa1420210 | 0.816678 | 4.885280e-52 | -8.615850e-47 |
| Msa0402650 | Msa1333010 | 0.833713 | 4.553702e-56 | -8.615850e-47 |
| Msa0449210 | Msa1333010 | 0.803682 | 3.103093e-49 | -8.615850e-47 |
| Msa1009820 | Msa1333010 | 0.808383 | 3.181371e-50 | -8.615850e-47 |
| Msa1051200 | Msa1333010 | 0.810408 | 1.170126e-50 | -8.615850e-47 |
| Msa1082810 | Msa1333010 | 0.819397 | 1.186882e-52 | -8.615850e-47 |
| Msa1213480 | Msa1333010 | 0.813474 | 2.513845e-51 | -8.615850e-47 |
| Msa1218730 | Msa1333010 | 0.887047 | 2.009587e-72 | -8.615850e-47 |
| Msa0529830 | Msa1333010 | 0.820219 | 7.699044e-53 | -8.615850e-47 |
| Msa0585510 | Msa1333010 | 0.821404 | 4.111291e-53 | -8.615850e-47 |
| Msa0945990 | Msa1333010 | 0.807145 | 5.831905e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333010 | MtrunA17_Chr4g0068351 | 90.656 | 1113 | 91 | 3 | 1 | 1103 | 1 | 1110 | 0.0 | 2022 |
| Msa1333010 | MtrunA17_Chr2g0304751 | 31.925 | 213 | 92 | 6 | 141 | 304 | 306 | 514 | 8.46e-22 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333010 | AT3G66652.3 | 29.572 | 257 | 94 | 5 | 52 | 303 | 82 | 256 | 5.84e-22 | 103 |
| Msa1333010 | AT3G66652.1 | 29.572 | 257 | 94 | 5 | 52 | 303 | 82 | 256 | 5.84e-22 | 103 |
| Msa1333010 | AT3G66652.2 | 29.572 | 257 | 94 | 5 | 52 | 303 | 82 | 256 | 5.84e-22 | 103 |
| Msa1333010 | AT5G58040.2 | 32.683 | 205 | 86 | 5 | 174 | 326 | 329 | 533 | 1.33e-18 | 92.4 |
| Msa1333010 | AT5G58040.1 | 32.683 | 205 | 86 | 5 | 174 | 326 | 329 | 533 | 1.34e-18 | 92.4 |
Find 256 sgRNAs with CRISPR-Local
Find 532 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAAGCAATTTCTTATTT+TGG | 0.136303 | 8_4:+53016343 | None:intergenic |
| AATCCGGTGTCTTGATTAAT+AGG | 0.151869 | 8_4:-53018565 | Msa1333010:CDS |
| TGAACCGCAGATTGGTAATT+TGG | 0.166594 | 8_4:-53016157 | Msa1333010:CDS |
| TTCAAGGCATTCCTCCTTTC+CGG | 0.178616 | 8_4:-53019377 | Msa1333010:CDS |
| ATTCTGATTATGCGCATATT+TGG | 0.187022 | 8_4:+53019063 | None:intergenic |
| TCTTGACACATTAGCTAAAA+TGG | 0.190473 | 8_4:-53016121 | Msa1333010:CDS |
| GATGAACGACTGCAATATTT+TGG | 0.199819 | 8_4:-53019709 | Msa1333010:CDS |
| ACAAAACAATCTTGCTATTA+TGG | 0.224867 | 8_4:-53019649 | Msa1333010:CDS |
| CTTCAGAACCTTTCAGATAA+AGG | 0.241730 | 8_4:-53016327 | Msa1333010:CDS |
| GGGAATATGAAGACAGATTC+AGG | 0.251532 | 8_4:-53019570 | Msa1333010:CDS |
| TAGAATAATGTATCATCTTC+AGG | 0.255082 | 8_4:+53018776 | None:intergenic |
| TTCTGATTATGCGCATATTT+GGG | 0.258920 | 8_4:+53019064 | None:intergenic |
| GAATAATAAGATGTATTTAC+TGG | 0.268929 | 8_4:+53019901 | None:intergenic |
| GAGTTCTGACACTGGCTTAA+AGG | 0.272628 | 8_4:-53019977 | Msa1333010:CDS |
| CATTGTACACCCTGATTCTT+GGG | 0.277105 | 8_4:-53015760 | Msa1333010:three_prime_UTR |
| CCTGATCAATGCACTCTTCC+TGG | 0.281553 | 8_4:+53022652 | None:intergenic |
| GAAGAGAGTGAATTAATTTC+AGG | 0.287879 | 8_4:-53021390 | Msa1333010:CDS |
| CAATTTGATCAACCTGTATC+AGG | 0.289591 | 8_4:-53021832 | Msa1333010:CDS |
| ACATTGTACACCCTGATTCT+TGG | 0.303624 | 8_4:-53015761 | Msa1333010:three_prime_UTR |
| CCTCCTTTCCGGCTAAAGAT+AGG | 0.305122 | 8_4:-53019366 | Msa1333010:CDS |
| TTTGGAACTGTGAAGAAAAC+TGG | 0.318746 | 8_4:+53022928 | None:intergenic |
| CCAAACAATATTATCATTGT+TGG | 0.326368 | 8_4:+53018817 | None:intergenic |
| TCTATCAAAGCCCAAGAATC+AGG | 0.327839 | 8_4:+53015750 | None:intergenic |
| AAGAAGAGAATCTCACAAAA+TGG | 0.328097 | 8_4:-53016189 | Msa1333010:CDS |
| TGGTTATTGTCCAAACGTTC+AGG | 0.333850 | 8_4:+53022672 | None:intergenic |
| ATAACAGATTACTTCAATTT+CGG | 0.334106 | 8_4:-53021992 | Msa1333010:CDS |
| TGATCACCAAGTGATAATTC+TGG | 0.335553 | 8_4:+53020105 | None:intergenic |
| TCAAGTTCCAGTTACTTTGC+TGG | 0.342297 | 8_4:-53022216 | Msa1333010:CDS |
| TATTTGCATTATTGAATACT+TGG | 0.345643 | 8_4:-53015842 | Msa1333010:three_prime_UTR |
| TTCTGAAGATGGTAAAGTTC+TGG | 0.346515 | 8_4:-53020196 | Msa1333010:CDS |
| GAAGCAATACTGTTCGTCTT+TGG | 0.355159 | 8_4:-53021951 | Msa1333010:intron |
| AGATTCCTTCCACTGGATCT+AGG | 0.358130 | 8_4:+53019769 | None:intergenic |
| GGAAAGATGTTCCATATGAT+TGG | 0.360190 | 8_4:-53019675 | Msa1333010:CDS |
| AAAAGATCCAGCAAAGTAAC+TGG | 0.367382 | 8_4:+53022209 | None:intergenic |
| GTGGAAGGAATCTGTCTTCC+CGG | 0.374128 | 8_4:-53019759 | Msa1333010:CDS |
| AGATTCTGATGTTATTATAC+AGG | 0.376619 | 8_4:-53021560 | Msa1333010:intron |
| AAACAATCCGAAGTGCCTTC+TGG | 0.376840 | 8_4:-53021297 | Msa1333010:CDS |
| TTCAGAACCTTTCAGATAAA+GGG | 0.378762 | 8_4:-53016326 | Msa1333010:CDS |
| CCAACAATGATAATATTGTT+TGG | 0.381761 | 8_4:-53018817 | Msa1333010:CDS |
| TGTTGTTCATCCTGAACGTT+TGG | 0.386120 | 8_4:-53022682 | Msa1333010:CDS |
| GAATATCGGTCCTCTTCATC+TGG | 0.386361 | 8_4:+53020216 | None:intergenic |
| AATGTTTGTGAACAATATTA+TGG | 0.387283 | 8_4:-53022316 | Msa1333010:CDS |
| GAGAAGCCGTGGAGGATTCC+CGG | 0.388121 | 8_4:-53022022 | Msa1333010:CDS |
| CCTGAGTCTCCTCTCATATA+GGG | 0.390031 | 8_4:-53019416 | Msa1333010:CDS |
| CCACGGGGTATCCACATCTA+TGG | 0.390852 | 8_4:+53019111 | None:intergenic |
| GATGTGGATACCCCGTGGTC+TGG | 0.401754 | 8_4:-53019106 | Msa1333010:CDS |
| CTTGCATGTCTTTCGTGCAT+TGG | 0.403446 | 8_4:+53018743 | None:intergenic |
| CTTTACCATCTTCAGAATAT+CGG | 0.405280 | 8_4:+53020202 | None:intergenic |
| ACCTGAGTCTCCTCTCATAT+AGG | 0.415425 | 8_4:-53019417 | Msa1333010:CDS |
| TGTTGTTGCGGAGGAGGAGG+TGG | 0.417036 | 8_4:+53022822 | None:intergenic |
| ATCCGAAGTGCCTTCTGGTC+AGG | 0.417510 | 8_4:-53021292 | Msa1333010:CDS |
| TAGCCCCTTAAGAAGTCATT+TGG | 0.418795 | 8_4:-53020001 | Msa1333010:CDS |
| CATATGAATGTTGATGTAAC+AGG | 0.419589 | 8_4:-53015695 | Msa1333010:three_prime_UTR |
| TATACAGTGAATATTCAGAT+AGG | 0.422164 | 8_4:-53019591 | Msa1333010:CDS |
| ATTATGGCTAATAAGTCAAT+GGG | 0.422170 | 8_4:-53022300 | Msa1333010:CDS |
| ACCTGTATTGCTCTTCCCAT+TGG | 0.424082 | 8_4:+53021640 | None:intergenic |
| ACTCACCAAATGACTTCTTA+AGG | 0.424522 | 8_4:+53019996 | None:intergenic |
| CTTTCTGCCCTTTATCTGAA+AGG | 0.424602 | 8_4:+53016319 | None:intergenic |
| TGCAGAGAAGCGTAAAGCTT+TGG | 0.427826 | 8_4:-53016430 | Msa1333010:CDS |
| TGCCTCTGATCCTGTTGTAC+TGG | 0.428982 | 8_4:+53019865 | None:intergenic |
| TATTATGGCTAATAAGTCAA+TGG | 0.430254 | 8_4:-53022301 | Msa1333010:CDS |
| AAATAGAGGTCCAGTACAAC+AGG | 0.432030 | 8_4:-53019875 | Msa1333010:CDS |
| TAAAGGGCAGAAAGAAGGTT+TGG | 0.432450 | 8_4:-53016310 | Msa1333010:CDS |
| CTCACCAAATGACTTCTTAA+GGG | 0.438527 | 8_4:+53019997 | None:intergenic |
| ACTGACTCGGCAGTTGATAT+AGG | 0.441153 | 8_4:-53015994 | Msa1333010:CDS |
| AACTGTGTCAGAGGTGGTTA+CGG | 0.441261 | 8_4:-53022579 | Msa1333010:CDS |
| TGGGAAGAGCAATACAGGTT+GGG | 0.441844 | 8_4:-53021636 | Msa1333010:CDS |
| CTCAGAATCATTGTCAGAAT+AGG | 0.443847 | 8_4:+53020065 | None:intergenic |
| GCCAATGGGAAGAGCAATAC+AGG | 0.444425 | 8_4:-53021641 | Msa1333010:CDS |
| CCAGTCATTGCCTCTGTTGG+TGG | 0.451413 | 8_4:+53018940 | None:intergenic |
| TGTAAACATTGATAAATTTG+AGG | 0.452481 | 8_4:-53022044 | Msa1333010:CDS |
| TGTATCATTTCGCATCAGTC+TGG | 0.454029 | 8_4:+53016476 | None:intergenic |
| GCATGTCTTTCGTGCATTGG+AGG | 0.455104 | 8_4:+53018746 | None:intergenic |
| GAAAGTAAGCTCCCTGATAC+AGG | 0.455319 | 8_4:+53021820 | None:intergenic |
| TGTTGCGGAGGAGGAGGTGG+AGG | 0.455574 | 8_4:+53022825 | None:intergenic |
| GAAACTGTGATTCTGATCAA+TGG | 0.455890 | 8_4:-53019297 | Msa1333010:CDS |
| GAGGAGTGGCTAGAACTTGT+AGG | 0.456687 | 8_4:+53022844 | None:intergenic |
| GAAAGATGTTCCATATGATT+GGG | 0.457654 | 8_4:-53019674 | Msa1333010:CDS |
| CATGACAATGATGGCGGCGG+TGG | 0.459150 | 8_4:-53022798 | Msa1333010:CDS |
| CTCCTTTCCGGCTAAAGATA+GGG | 0.464638 | 8_4:-53019365 | Msa1333010:CDS |
| GAAATAGATCCTTGCATGCT+AGG | 0.464757 | 8_4:-53018721 | Msa1333010:CDS |
| ATGTGGATACCCCGTGGTCT+GGG | 0.466318 | 8_4:-53019105 | Msa1333010:CDS |
| GACGATACCGAGAGCGAAGA+TGG | 0.468920 | 8_4:-53022756 | Msa1333010:CDS |
| GTCCAGTGTGAAACCTCATA+TGG | 0.473357 | 8_4:+53018839 | None:intergenic |
| ATCCTCAGAAACAACTCTTC+TGG | 0.473395 | 8_4:+53016233 | None:intergenic |
| AATATAATGAAGATGACGAT+TGG | 0.473462 | 8_4:-53019474 | Msa1333010:CDS |
| ATAAGGAGGCAGCCGCCTAT+AGG | 0.475415 | 8_4:-53023015 | Msa1333010:five_prime_UTR |
| TACTTCGTTATTCGAACCGA+TGG | 0.479928 | 8_4:+53016038 | None:intergenic |
| CCTCCGTTCTCCCAGACCAC+GGG | 0.480663 | 8_4:+53019095 | None:intergenic |
| TCAAGTACGTTGCATTTGAC+AGG | 0.480847 | 8_4:+53021420 | None:intergenic |
| ATATAATGAAGATGACGATT+GGG | 0.482597 | 8_4:-53019473 | Msa1333010:CDS |
| CCAGGAAGAGTGCATTGATC+AGG | 0.484784 | 8_4:-53022652 | Msa1333010:CDS |
| TCAGATAAAGGGCAGAAAGA+AGG | 0.486125 | 8_4:-53016315 | Msa1333010:CDS |
| GACAGGAGCAGAAGTGTTGT+CGG | 0.489261 | 8_4:+53021437 | None:intergenic |
| TAAAACTCGCACTCATCTAC+AGG | 0.489960 | 8_4:+53018869 | None:intergenic |
| CTGATTCTGCAGTCAGCAAA+AGG | 0.494129 | 8_4:-53016501 | Msa1333010:intron |
| TGAAATAAAGCAACAGAGGC+CGG | 0.494386 | 8_4:-53015971 | Msa1333010:CDS |
| CACTGTATACTGCCTGATCC+AGG | 0.495185 | 8_4:+53019605 | None:intergenic |
| CATTGCCTCTGTTGGTGGCA+TGG | 0.496012 | 8_4:+53018945 | None:intergenic |
| ATCCGGTGTCTTGATTAATA+GGG | 0.496870 | 8_4:-53018564 | Msa1333010:CDS |
| AAATGTTGATGACCTGGATC+AGG | 0.498206 | 8_4:-53019617 | Msa1333010:CDS |
| GGTTATGTGCTGTGGCCTAT+AGG | 0.500704 | 8_4:+53023000 | None:intergenic |
| TCTTATTATTCAAGAAATAG+AGG | 0.501104 | 8_4:-53019889 | Msa1333010:CDS |
| TCATGGTGTTGTTGCGGAGG+AGG | 0.501315 | 8_4:+53022816 | None:intergenic |
| TTCCAGCGTCTCTTTCGAAC+CGG | 0.503289 | 8_4:+53015952 | None:intergenic |
| TGGTGTTGTTGCGGAGGAGG+AGG | 0.504083 | 8_4:+53022819 | None:intergenic |
| AATAATTCTGAACCGCAGAT+TGG | 0.504224 | 8_4:-53016165 | Msa1333010:CDS |
| TGAGCTTCCCTATCTTTAGC+CGG | 0.505864 | 8_4:+53019358 | None:intergenic |
| TAGAATGATAGTAACTGATA+AGG | 0.507606 | 8_4:-53023032 | None:intergenic |
| CAACAACACCATGACAATGA+TGG | 0.508864 | 8_4:-53022807 | Msa1333010:CDS |
| TTCATCTTTCGCTCAAGGAA+GGG | 0.513627 | 8_4:-53022262 | Msa1333010:CDS |
| TACCCCGTGGTCTGGGAGAA+CGG | 0.515959 | 8_4:-53019098 | Msa1333010:CDS |
| GATTCCTTCCACTGGATCTA+GGG | 0.516557 | 8_4:+53019770 | None:intergenic |
| CTATTCTGACAATGATTCTG+AGG | 0.517781 | 8_4:-53020064 | Msa1333010:CDS |
| CAGGATCAGAGGCATCAAAC+TGG | 0.518562 | 8_4:-53019856 | Msa1333010:CDS |
| AGTCAAGGCAGTTTCATTCA+AGG | 0.518925 | 8_4:-53019393 | Msa1333010:CDS |
| TCCTCCGTTCTCCCAGACCA+CGG | 0.520629 | 8_4:+53019094 | None:intergenic |
| TATTGCATCTCAGCACCGTC+GGG | 0.520792 | 8_4:+53018588 | None:intergenic |
| CCCTATATGAGAGGAGACTC+AGG | 0.520802 | 8_4:+53019416 | None:intergenic |
| CTGCCAGTCATTGCCTCTGT+TGG | 0.521166 | 8_4:+53018937 | None:intergenic |
| GTGCTGAGATGCAATAAATC+CGG | 0.521449 | 8_4:-53018581 | Msa1333010:CDS |
| GCATTATTGAATACTTGGGA+AGG | 0.521656 | 8_4:-53015837 | Msa1333010:three_prime_UTR |
| TCATCTTTCGCTCAAGGAAG+GGG | 0.521933 | 8_4:-53022261 | Msa1333010:CDS |
| TCACAATCGCAGAAATGACC+TGG | 0.522617 | 8_4:-53020265 | Msa1333010:intron |
| AGATAGAACATCATGTTCAC+TGG | 0.522652 | 8_4:+53021341 | None:intergenic |
| GTTCATCTTTCGCTCAAGGA+AGG | 0.523958 | 8_4:-53022263 | Msa1333010:CDS |
| AGAGCACAAGAACGATATAC+AGG | 0.524508 | 8_4:-53019160 | Msa1333010:CDS |
| TTGATTATTCTTCAGCCAAT+GGG | 0.526661 | 8_4:-53021655 | Msa1333010:intron |
| CCACCAACAGAGGCAATGAC+TGG | 0.526705 | 8_4:-53018940 | Msa1333010:CDS |
| ATTTGCATTATTGAATACTT+GGG | 0.528165 | 8_4:-53015841 | Msa1333010:three_prime_UTR |
| GATTGTTCATCTTTCGCTCA+AGG | 0.528423 | 8_4:-53022267 | Msa1333010:CDS |
| GTAATCTGTTATGTCGGCAC+CGG | 0.528884 | 8_4:+53022003 | None:intergenic |
| TTGTCCTGCTGCTTGTGTTG+AGG | 0.530125 | 8_4:-53022706 | Msa1333010:CDS |
| GAGGACCGATATTCTGAAGA+TGG | 0.530326 | 8_4:-53020207 | Msa1333010:CDS |
| TTCCCTATCTTTAGCCGGAA+AGG | 0.530551 | 8_4:+53019363 | None:intergenic |
| GAAGGTTTGGATGTAGAAGA+AGG | 0.531483 | 8_4:-53016297 | Msa1333010:CDS |
| TTGTAGTTTATGAAGACTCA+AGG | 0.533121 | 8_4:-53022342 | Msa1333010:intron |
| CTTGATTAATAGGGAAGGAA+AGG | 0.535406 | 8_4:-53018555 | Msa1333010:intron |
| TTATTGCATCTCAGCACCGT+CGG | 0.535767 | 8_4:+53018587 | None:intergenic |
| AAATAGATCCTTGCATGCTA+GGG | 0.536684 | 8_4:-53018720 | Msa1333010:CDS |
| AGAATAATGTATCATCTTCA+GGG | 0.538295 | 8_4:+53018777 | None:intergenic |
| AATTCTGGTTCACTACAGCC+TGG | 0.538311 | 8_4:+53020120 | None:intergenic |
| GTCCAGTACAACAGGATCAG+AGG | 0.538398 | 8_4:-53019867 | Msa1333010:CDS |
| TCTTTGCACCCTAGCATGCA+AGG | 0.538465 | 8_4:+53018712 | None:intergenic |
| TAGCTAAAATGGAGAAACGT+AGG | 0.542189 | 8_4:-53016110 | Msa1333010:CDS |
| AATTCAGAATCCAGATGAAG+AGG | 0.542516 | 8_4:-53020226 | Msa1333010:CDS |
| GAAGGGGTAGACATCATGAC+AGG | 0.543323 | 8_4:-53019138 | Msa1333010:CDS |
| CATTATTGAATACTTGGGAA+GGG | 0.543594 | 8_4:-53015836 | Msa1333010:three_prime_UTR |
| GGGAAGAGCAATACAGGTTG+GGG | 0.545158 | 8_4:-53021635 | Msa1333010:CDS |
| GGAATATGAAGACAGATTCA+GGG | 0.549642 | 8_4:-53019569 | Msa1333010:CDS |
| GTTCGAAAGAGACGCTGGAA+TGG | 0.549713 | 8_4:-53015949 | Msa1333010:CDS |
| CACTTCAAAATGTGGATCGA+GGG | 0.549761 | 8_4:-53016455 | Msa1333010:CDS |
| GACACATGCAGTGAAGATCC+AGG | 0.551473 | 8_4:-53020138 | Msa1333010:CDS |
| TTCCCTATTAATCAAGACAC+CGG | 0.551477 | 8_4:+53018562 | None:intergenic |
| TCGGTTTAAATGAGAACACT+TGG | 0.552338 | 8_4:-53021973 | Msa1333010:CDS |
| GAGAAGCGTAAAGCTTTGGT+AGG | 0.552922 | 8_4:-53016426 | Msa1333010:CDS |
| CACCGCCGCCATCATTGTCA+TGG | 0.553019 | 8_4:+53022799 | None:intergenic |
| ATTCAAACCATCTTCGCTCT+CGG | 0.554356 | 8_4:+53022749 | None:intergenic |
| ATGGGAAGAGCAATACAGGT+TGG | 0.556587 | 8_4:-53021637 | Msa1333010:CDS |
| GGAAGACAGATTCCTTCCAC+TGG | 0.557364 | 8_4:+53019762 | None:intergenic |
| TTCCTGACCAGAAGGCACTT+CGG | 0.558677 | 8_4:+53021290 | None:intergenic |
| ATTGAAGTAATCTGTTATGT+CGG | 0.559276 | 8_4:+53021997 | None:intergenic |
| TTTGGGCAGATCAATGTGCA+TGG | 0.559726 | 8_4:-53021465 | Msa1333010:intron |
| AGCTAAAATGGAGAAACGTA+GGG | 0.561211 | 8_4:-53016109 | Msa1333010:CDS |
| TAATCTGTTATGTCGGCACC+GGG | 0.562693 | 8_4:+53022004 | None:intergenic |
| GCGTGGACGCCTCACATCTA+CGG | 0.563983 | 8_4:+53021588 | None:intergenic |
| AAAGGCAAATAATGCATCAC+AGG | 0.564082 | 8_4:-53019336 | Msa1333010:CDS |
| AAGTGCCTTCTGGTCAGGAA+AGG | 0.564474 | 8_4:-53021287 | Msa1333010:intron |
| TTGGGCAGATCAATGTGCAT+GGG | 0.564891 | 8_4:-53021464 | Msa1333010:intron |
| TCCTCTCATATAGGGAGTCA+AGG | 0.565123 | 8_4:-53019408 | Msa1333010:CDS |
| AAATGATACACTTCAAAATG+TGG | 0.566953 | 8_4:-53016463 | Msa1333010:CDS |
| GCTTCTTTATTCATACCGAC+TGG | 0.567072 | 8_4:+53016072 | None:intergenic |
| CGGAGGAGGAGGTGGAGGAG+TGG | 0.567757 | 8_4:+53022830 | None:intergenic |
| CAAGAACGATATACAGGAAG+GGG | 0.569062 | 8_4:-53019154 | Msa1333010:CDS |
| ATACAGTGAATATTCAGATA+GGG | 0.571628 | 8_4:-53019590 | Msa1333010:CDS |
| TGTGAAACCTCATATGGGAG+GGG | 0.574793 | 8_4:+53018845 | None:intergenic |
| TCATTCCTCAAAATGTGAAG+TGG | 0.575525 | 8_4:-53021797 | Msa1333010:intron |
| TCACCAAATGACTTCTTAAG+GGG | 0.576985 | 8_4:+53019998 | None:intergenic |
| CATCTTTCGCTCAAGGAAGG+GGG | 0.578969 | 8_4:-53022260 | Msa1333010:CDS |
| GGCCGGTTCGAAAGAGACGC+TGG | 0.578971 | 8_4:-53015954 | Msa1333010:CDS |
| ACATCCTCAACACAAGCAGC+AGG | 0.579788 | 8_4:+53022702 | None:intergenic |
| AGATGATACATTATTCTATG+AGG | 0.580067 | 8_4:-53018771 | Msa1333010:CDS |
| CATTTGGTGAGTTCTGACAC+TGG | 0.580187 | 8_4:-53019985 | Msa1333010:CDS |
| TCTGATTATGCGCATATTTG+GGG | 0.580429 | 8_4:+53019065 | None:intergenic |
| TCCAGTGTGAAACCTCATAT+GGG | 0.582401 | 8_4:+53018840 | None:intergenic |
| CACAAGAACGATATACAGGA+AGG | 0.586945 | 8_4:-53019156 | Msa1333010:CDS |
| TGTAGTTTATGAAGACTCAA+GGG | 0.588636 | 8_4:-53022341 | Msa1333010:intron |
| CTATCAAAGCCCAAGAATCA+GGG | 0.588819 | 8_4:+53015751 | None:intergenic |
| TGTTCTATCTGATGAACAGT+TGG | 0.590396 | 8_4:-53021328 | Msa1333010:CDS |
| TATTCTGACAATGATTCTGA+GGG | 0.593340 | 8_4:-53020063 | Msa1333010:CDS |
| GTGTGAAACCTCATATGGGA+GGG | 0.594584 | 8_4:+53018844 | None:intergenic |
| AATTAACAAATCGATGACAC+CGG | 0.595250 | 8_4:+53019740 | None:intergenic |
| TTCTCGCTCAGCAAAAGAAG+AGG | 0.597493 | 8_4:+53019231 | None:intergenic |
| GCCTCACATCTACGGATGGT+TGG | 0.597566 | 8_4:+53021596 | None:intergenic |
| AATGATAGTAACTGATAAGG+AGG | 0.598228 | 8_4:-53023029 | None:intergenic |
| CACCATGACAATGATGGCGG+CGG | 0.599899 | 8_4:-53022801 | Msa1333010:CDS |
| GTGAAACCTCATATGGGAGG+GGG | 0.601096 | 8_4:+53018846 | None:intergenic |
| AATTTGATCAACCTGTATCA+GGG | 0.603259 | 8_4:-53021831 | Msa1333010:CDS |
| GATTATACGAACAAGAAGAC+AGG | 0.609026 | 8_4:+53022979 | None:intergenic |
| ACAAACCTTTCCTGACCAGA+AGG | 0.610940 | 8_4:+53021282 | None:intergenic |
| TGACAGGGCCTCCATAGATG+TGG | 0.613366 | 8_4:-53019122 | Msa1333010:CDS |
| ACTTCGTTATTCGAACCGAT+GGG | 0.613592 | 8_4:+53016039 | None:intergenic |
| TTGTCATGGTGTTGTTGCGG+AGG | 0.614553 | 8_4:+53022813 | None:intergenic |
| TCATTGTCATGGTGTTGTTG+CGG | 0.614911 | 8_4:+53022810 | None:intergenic |
| TGACAGAAATGTTGATGACC+TGG | 0.620403 | 8_4:-53019623 | Msa1333010:CDS |
| ATCTTTCGCTCAAGGAAGGG+GGG | 0.621812 | 8_4:-53022259 | Msa1333010:CDS |
| CCTATCTTTAGCCGGAAAGG+AGG | 0.622134 | 8_4:+53019366 | None:intergenic |
| GATACAGAAACTTCGACGGA+TGG | 0.622411 | 8_4:+53016255 | None:intergenic |
| TGAAGATGGTAAAGTTCTGG+AGG | 0.623449 | 8_4:-53020193 | Msa1333010:CDS |
| AGAAGACAGGTTATGTGCTG+TGG | 0.627516 | 8_4:+53022992 | None:intergenic |
| CTAAAGATAGGGAAGCTCAA+AGG | 0.628869 | 8_4:-53019354 | Msa1333010:CDS |
| TTTGAAGTTGAACACTGACT+CGG | 0.629197 | 8_4:-53016007 | Msa1333010:CDS |
| TCGGCACCGGGAATCCTCCA+CGG | 0.630361 | 8_4:+53022016 | None:intergenic |
| ACACTTCAAAATGTGGATCG+AGG | 0.630743 | 8_4:-53016456 | Msa1333010:CDS |
| GGTGTCTTGATTAATAGGGA+AGG | 0.633166 | 8_4:-53018560 | Msa1333010:CDS |
| TCTCACATCCCTAGATCCAG+TGG | 0.634148 | 8_4:-53019778 | Msa1333010:CDS |
| ATAAATTTGAGGAGAAGCCG+TGG | 0.635122 | 8_4:-53022033 | Msa1333010:CDS |
| ACATCCCTAGATCCAGTGGA+AGG | 0.638284 | 8_4:-53019774 | Msa1333010:CDS |
| CAAACTGGTAGACATATGCC+CGG | 0.638995 | 8_4:-53019841 | Msa1333010:CDS |
| ACAAGAACGATATACAGGAA+GGG | 0.640237 | 8_4:-53019155 | Msa1333010:CDS |
| TCTGGATACAGAAACTTCGA+CGG | 0.640452 | 8_4:+53016251 | None:intergenic |
| GCCAACCATCCGTAGATGTG+AGG | 0.640599 | 8_4:-53021597 | Msa1333010:CDS |
| GCCTTGACTCCCTATATGAG+AGG | 0.642152 | 8_4:+53019407 | None:intergenic |
| ATCCAGAAGAGTTGTTTCTG+AGG | 0.643385 | 8_4:-53016235 | Msa1333010:CDS |
| TCTCGCTCAGCAAAAGAAGA+GGG | 0.645386 | 8_4:+53019232 | None:intergenic |
| AGTGTGAAACCTCATATGGG+AGG | 0.646826 | 8_4:+53018843 | None:intergenic |
| ATTAACAAATCGATGACACC+GGG | 0.647422 | 8_4:+53019741 | None:intergenic |
| CTCCGTTCTCCCAGACCACG+GGG | 0.647651 | 8_4:+53019096 | None:intergenic |
| GAAGCAGTGAAGCAGCCCAT+CGG | 0.655244 | 8_4:-53016054 | Msa1333010:CDS |
| AGTGGCTAGAACTTGTAGGT+CGG | 0.656034 | 8_4:+53022848 | None:intergenic |
| CTGTCCAAATTACCAATCTG+CGG | 0.656360 | 8_4:+53016153 | None:intergenic |
| TGAACGTTTGGACAATAACC+AGG | 0.658846 | 8_4:-53022670 | Msa1333010:CDS |
| AGTGAACCAGAATTATCACT+TGG | 0.659426 | 8_4:-53020111 | Msa1333010:CDS |
| TCCCATATGAGGTTTCACAC+TGG | 0.665363 | 8_4:-53018841 | Msa1333010:CDS |
| CGGGGTATCCACATCTATGG+AGG | 0.665605 | 8_4:+53019114 | None:intergenic |
| CATAACCATGCCACCAACAG+AGG | 0.665694 | 8_4:-53018950 | Msa1333010:CDS |
| AAATGACCTGGATCCTGATG+TGG | 0.667202 | 8_4:-53020253 | Msa1333010:CDS |
| CCCGTGGTCTGGGAGAACGG+AGG | 0.668646 | 8_4:-53019095 | Msa1333010:CDS |
| TAGAGATCACTCTCACCCGA+CGG | 0.671020 | 8_4:-53018603 | Msa1333010:CDS |
| TTGATCAAATTGCTCCTGTG+TGG | 0.673387 | 8_4:+53021843 | None:intergenic |
| GTAAACACTGACCAATGCCA+AGG | 0.674544 | 8_4:+53022183 | None:intergenic |
| TAGGTGAAATAAAGCAACAG+AGG | 0.677763 | 8_4:-53015975 | Msa1333010:CDS |
| AATACAGGTTGGGGACAGTG+TGG | 0.682082 | 8_4:-53021626 | Msa1333010:CDS |
| AGTTCTGATGCACAACATTG+TGG | 0.683317 | 8_4:-53022615 | Msa1333010:CDS |
| CAACACCATGACAATGATGG+CGG | 0.686096 | 8_4:-53022804 | Msa1333010:CDS |
| ACTGATGCTGCTGAAGACGA+AGG | 0.688837 | 8_4:-53018905 | Msa1333010:CDS |
| ACATCAGAATCTATACTGCG+TGG | 0.694629 | 8_4:+53021571 | None:intergenic |
| AGAGGCAATGACTGGCAGTG+TGG | 0.695843 | 8_4:-53018932 | Msa1333010:CDS |
| AAACTGGAAATTGTAAACGT+CGG | 0.696872 | 8_4:+53022944 | None:intergenic |
| AATTTGAGGAGAAGCCGTGG+AGG | 0.697052 | 8_4:-53022030 | Msa1333010:CDS |
| CCATAGATGTGGATACCCCG+TGG | 0.697300 | 8_4:-53019111 | Msa1333010:CDS |
| AAGGGGTAGACATCATGACA+GGG | 0.710725 | 8_4:-53019137 | Msa1333010:CDS |
| AGGAGCAGAAGTGTTGTCGG+AGG | 0.712271 | 8_4:+53021440 | None:intergenic |
| TATGTGCTGTGGCCTATAGG+CGG | 0.747143 | 8_4:+53023003 | None:intergenic |
| TTATGGCTAATAAGTCAATG+GGG | 0.760772 | 8_4:-53022299 | Msa1333010:CDS |
| ATATGAAGACAGATTCAGGG+AGG | 0.765745 | 8_4:-53019566 | Msa1333010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTATTTTTTTTGTTTTTTTT+TGG | + | chr8_4:53017934-53017953 | None:intergenic | 10.0% |
| !!! | TTATGTGTTTTATTCATTAT+TGG | - | chr8_4:53016570-53016589 | Msa1333010:intron | 15.0% |
| !! | AAATTGAAATGATTAAAATG+TGG | + | chr8_4:53016948-53016967 | None:intergenic | 15.0% |
| !!! | ATATTTTTTTAATCCTAATG+AGG | + | chr8_4:53017716-53017735 | None:intergenic | 15.0% |
| !! | TCAGGAATTTATATTTAAAA+AGG | + | chr8_4:53018336-53018355 | None:intergenic | 15.0% |
| !! | TAAAAGAATAAAAATAGAGA+AGG | + | chr8_4:53020307-53020326 | None:intergenic | 15.0% |
| !!! | TGAAATATCATGTTTTATTT+TGG | + | chr8_4:53020449-53020468 | None:intergenic | 15.0% |
| !! | AAATAAAACATGATATTTCA+TGG | - | chr8_4:53020449-53020468 | Msa1333010:intron | 15.0% |
| !!! | GGTTATTCTTAATATTTTTT+GGG | + | chr8_4:53021077-53021096 | None:intergenic | 15.0% |
| !!! | AGGTTATTCTTAATATTTTT+TGG | + | chr8_4:53021078-53021097 | None:intergenic | 15.0% |
| !! | AAAAATATTAAGAATAACCT+TGG | - | chr8_4:53021078-53021097 | Msa1333010:intron | 15.0% |
| !! | AAAATATTAAGAATAACCTT+GGG | - | chr8_4:53021079-53021098 | Msa1333010:intron | 15.0% |
| !! | AAATATAAACTTGAAAAGTA+AGG | + | chr8_4:53021195-53021214 | None:intergenic | 15.0% |
| !! | AAAATGGTTTAATGAATAAT+TGG | - | chr8_4:53021528-53021547 | Msa1333010:intron | 15.0% |
| !! | ATTTCTGATCATAAAAATTA+GGG | + | chr8_4:53021830-53021849 | None:intergenic | 15.0% |
| !! | TATCTATATTTATTCATATC+AGG | - | chr8_4:53021973-53021992 | Msa1333010:CDS | 15.0% |
| !!! | GTTTTGATAATAAATTTATG+AGG | - | chr8_4:53022161-53022180 | Msa1333010:intron | 15.0% |
| !!! | AACTTTATGCTTTTAATTAC+TGG | - | chr8_4:53016190-53016209 | Msa1333010:CDS | 20.0% |
| !! | AATGTTTGTGAACAATATTA+TGG | - | chr8_4:53016380-53016399 | Msa1333010:CDS | 20.0% |
| !! | TGTAAACATTGATAAATTTG+AGG | - | chr8_4:53016652-53016671 | Msa1333010:intron | 20.0% |
| !! | ATAACAGATTACTTCAATTT+CGG | - | chr8_4:53016704-53016723 | Msa1333010:intron | 20.0% |
| !!! | GTTAGTTTTCATTGTTATTT+TGG | + | chr8_4:53017505-53017524 | None:intergenic | 20.0% |
| !! | AATCATTATGTATCTCTTTA+GGG | + | chr8_4:53017551-53017570 | None:intergenic | 20.0% |
| !! | TAATCATTATGTATCTCTTT+AGG | + | chr8_4:53017552-53017571 | None:intergenic | 20.0% |
| !! | TTGGAAAATATCATATTTGA+TGG | - | chr8_4:53018132-53018151 | Msa1333010:intron | 20.0% |
| !! | GAATAATAAGATGTATTTAC+TGG | + | chr8_4:53018798-53018817 | None:intergenic | 20.0% |
| !! | TCTTATTATTCAAGAAATAG+AGG | - | chr8_4:53018807-53018826 | Msa1333010:CDS | 20.0% |
| !! | AATCAATATATCAGAAAAAG+TGG | - | chr8_4:53019158-53019177 | Msa1333010:CDS | 20.0% |
| !! | ATCAATATATCAGAAAAAGT+GGG | - | chr8_4:53019159-53019178 | Msa1333010:CDS | 20.0% |
| !!! | TATCATGTTTTATTTTGGAA+AGG | + | chr8_4:53020444-53020463 | None:intergenic | 20.0% |
| !! | TACCAAACAATATGATAAAT+AGG | + | chr8_4:53020505-53020524 | None:intergenic | 20.0% |
| !!! | TTACTCAACTTAGTTTTATT+CGG | - | chr8_4:53020577-53020596 | Msa1333010:intron | 20.0% |
| !! | TTTGTCTTGATTTAATTATG+TGG | - | chr8_4:53020881-53020900 | Msa1333010:intron | 20.0% |
| !!! | TTATTTTATGTTTGAATGCA+TGG | - | chr8_4:53021219-53021238 | Msa1333010:intron | 20.0% |
| !!! | TTTTAGTTTACTGCTAAAAA+TGG | - | chr8_4:53021512-53021531 | Msa1333010:intron | 20.0% |
| !!! | TTAATGAATAATTGGTAGTT+TGG | - | chr8_4:53021536-53021555 | Msa1333010:intron | 20.0% |
| !!! | TAATGAATAATTGGTAGTTT+GGG | - | chr8_4:53021537-53021556 | Msa1333010:intron | 20.0% |
| !! | ATTTACTCAAATCAATATGT+TGG | - | chr8_4:53021604-53021623 | Msa1333010:CDS | 20.0% |
| !! | TATATTCCAATCATGTAAAT+GGG | + | chr8_4:53021633-53021652 | None:intergenic | 20.0% |
| !! | ATATATTCCAATCATGTAAA+TGG | + | chr8_4:53021634-53021653 | None:intergenic | 20.0% |
| !! | TTTACATGATTGGAATATAT+TGG | - | chr8_4:53021634-53021653 | Msa1333010:CDS | 20.0% |
| !! | GATTTCTGATCATAAAAATT+AGG | + | chr8_4:53021831-53021850 | None:intergenic | 20.0% |
| !! | TATTTGCATTATTGAATACT+TGG | - | chr8_4:53022854-53022873 | Msa1333010:CDS | 20.0% |
| !! | ATTTGCATTATTGAATACTT+GGG | - | chr8_4:53022855-53022874 | Msa1333010:CDS | 20.0% |
| !!! | AATCATCTTGTTCCATTTTT+TGG | + | chr8_4:53015789-53015808 | None:intergenic | 25.0% |
| !!! | TATGCTTTTAATTACTGGAA+TGG | - | chr8_4:53016195-53016214 | Msa1333010:CDS | 25.0% |
| ! | TATTATGGCTAATAAGTCAA+TGG | - | chr8_4:53016395-53016414 | Msa1333010:CDS | 25.0% |
| ! | ATTATGGCTAATAAGTCAAT+GGG | - | chr8_4:53016396-53016415 | Msa1333010:CDS | 25.0% |
| ! | ATTGAAGTAATCTGTTATGT+CGG | + | chr8_4:53016702-53016721 | None:intergenic | 25.0% |
| ! | TTGAATGCAAATTTGACATT+GGG | - | chr8_4:53017008-53017027 | Msa1333010:intron | 25.0% |
| ! | AGATTCTGATGTTATTATAC+AGG | - | chr8_4:53017136-53017155 | Msa1333010:intron | 25.0% |
| ! | CAATGAAAACTAACATCATT+AGG | - | chr8_4:53017511-53017530 | Msa1333010:intron | 25.0% |
| ! | ATCATTATGTATCTCTTTAG+GGG | + | chr8_4:53017550-53017569 | None:intergenic | 25.0% |
| ! | TTAATCCTAATGAGGTAAAA+CGG | + | chr8_4:53017708-53017727 | None:intergenic | 25.0% |
| !!! | CATCATTTTTTATTCTGCAT+TGG | - | chr8_4:53018113-53018132 | Msa1333010:intron | 25.0% |
| ! | AACGAATTACAATGAAGAAT+CGG | + | chr8_4:53018293-53018312 | None:intergenic | 25.0% |
| ! | TAACAAACAAACAATTTCCA+CGG | + | chr8_4:53018369-53018388 | None:intergenic | 25.0% |
| !! | TGGAAATTGTTTGTTTGTTA+GGG | - | chr8_4:53018369-53018388 | Msa1333010:intron | 25.0% |
| !!! | AATATTTTGGAAGTCATGAA+AGG | - | chr8_4:53019000-53019019 | Msa1333010:CDS | 25.0% |
| !!! | ACAAAACAATCTTGCTATTA+TGG | - | chr8_4:53019047-53019066 | Msa1333010:CDS | 25.0% |
| ! | TATACAGTGAATATTCAGAT+AGG | - | chr8_4:53019105-53019124 | Msa1333010:CDS | 25.0% |
| ! | ATACAGTGAATATTCAGATA+GGG | - | chr8_4:53019106-53019125 | Msa1333010:CDS | 25.0% |
| ! | TCAATATATCAGAAAAAGTG+GGG | - | chr8_4:53019160-53019179 | Msa1333010:CDS | 25.0% |
| ! | AATATAATGAAGATGACGAT+TGG | - | chr8_4:53019222-53019241 | Msa1333010:CDS | 25.0% |
| ! | ATATAATGAAGATGACGATT+GGG | - | chr8_4:53019223-53019242 | Msa1333010:CDS | 25.0% |
| ! | CCAAACAATATTATCATTGT+TGG | + | chr8_4:53019882-53019901 | None:intergenic | 25.0% |
| ! | CCAACAATGATAATATTGTT+TGG | - | chr8_4:53019879-53019898 | Msa1333010:CDS | 25.0% |
| ! | AGAATAATGTATCATCTTCA+GGG | + | chr8_4:53019922-53019941 | None:intergenic | 25.0% |
| ! | TAGAATAATGTATCATCTTC+AGG | + | chr8_4:53019923-53019942 | None:intergenic | 25.0% |
| ! | AGATGATACATTATTCTATG+AGG | - | chr8_4:53019925-53019944 | Msa1333010:CDS | 25.0% |
| !!! | TAAATTTTTCAAGGAAAGGT+GGG | - | chr8_4:53020035-53020054 | Msa1333010:CDS | 25.0% |
| ! | CTTTATAAAAAGAAGCTCTA+AGG | - | chr8_4:53020063-53020082 | Msa1333010:CDS | 25.0% |
| ! | AGGTAAAATTAGGGAAATTA+TGG | - | chr8_4:53020161-53020180 | Msa1333010:CDS | 25.0% |
| !! | ATAAAAAAGTACAGCAGTAT+AGG | + | chr8_4:53020194-53020213 | None:intergenic | 25.0% |
| ! | GGTACAATATATATTGAATG+AGG | + | chr8_4:53020247-53020266 | None:intergenic | 25.0% |
| ! | GTCCTATTTATCATATTGTT+TGG | - | chr8_4:53020500-53020519 | Msa1333010:intron | 25.0% |
| ! | GAAAAATCAGCTATAACAAA+AGG | + | chr8_4:53020552-53020571 | None:intergenic | 25.0% |
| !!! | TACTCAACTTAGTTTTATTC+GGG | - | chr8_4:53020578-53020597 | Msa1333010:intron | 25.0% |
| !!! | CCCATATATTAATTTTTAGG+CGG | + | chr8_4:53020751-53020770 | None:intergenic | 25.0% |
| ! | CCGCCTAAAAATTAATATAT+GGG | - | chr8_4:53020748-53020767 | Msa1333010:intron | 25.0% |
| !! | CAGCCCATATATTAATTTTT+AGG | + | chr8_4:53020754-53020773 | None:intergenic | 25.0% |
| ! | AATCTGACATATTGTAGAAT+GGG | - | chr8_4:53020781-53020800 | Msa1333010:intron | 25.0% |
| ! | AAATCAAGACAAAAGATCTA+AGG | + | chr8_4:53020874-53020893 | None:intergenic | 25.0% |
| ! | TGATTTAATTATGTGGCTTA+TGG | - | chr8_4:53020888-53020907 | Msa1333010:intron | 25.0% |
| !!! | AACAGTGACATATGTTTTTT+TGG | + | chr8_4:53021139-53021158 | None:intergenic | 25.0% |
| ! | AAATGTGAGTTCATATTTGA+AGG | + | chr8_4:53021168-53021187 | None:intergenic | 25.0% |
| ! | TATGGTACTAAATAAGTTTC+TGG | - | chr8_4:53021363-53021382 | Msa1333010:CDS | 25.0% |
| ! | AATATCTTTCAAATGCCATA+CGG | + | chr8_4:53021443-53021462 | None:intergenic | 25.0% |
| !! | TCTACTATTCTATTTTGTAG+TGG | - | chr8_4:53021849-53021868 | Msa1333010:CDS | 25.0% |
| !! | CTACTATTCTATTTTGTAGT+GGG | - | chr8_4:53021850-53021869 | Msa1333010:CDS | 25.0% |
| ! | TGTTAGGTAAAACTATTTCA+AGG | + | chr8_4:53021893-53021912 | None:intergenic | 25.0% |
| ! | CTGATATGAATAAAACAATG+AGG | + | chr8_4:53022027-53022046 | None:intergenic | 25.0% |
| !!! | CTCATTGTTTTATTCATATC+AGG | - | chr8_4:53022025-53022044 | Msa1333010:CDS | 25.0% |
| ! | AAATGATACACTTCAAAATG+TGG | - | chr8_4:53022233-53022252 | Msa1333010:CDS | 25.0% |
| !!! | TCTGAAGCAATTTCTTATTT+TGG | + | chr8_4:53022356-53022375 | None:intergenic | 25.0% |
| !! | ATGGTTAGATTTTACGTTTA+AGG | - | chr8_4:53022766-53022785 | Msa1333010:CDS | 25.0% |
| !!! | GTTCATTCGATTTTGATAAA+CGG | - | chr8_4:53022797-53022816 | Msa1333010:CDS | 25.0% |
| AAACTGGAAATTGTAAACGT+CGG | + | chr8_4:53015755-53015774 | None:intergenic | 30.0% | |
| TTCTTCACAGTTCCAAAAAA+TGG | - | chr8_4:53015774-53015793 | Msa1333010:three_prime_UTR | 30.0% | |
| AAAATCATCATCATCATCGT+GGG | + | chr8_4:53015815-53015834 | None:intergenic | 30.0% | |
| !!! | TTCACAATTTTTTCGCTCTA+AGG | - | chr8_4:53016140-53016159 | Msa1333010:CDS | 30.0% |
| ATTTGAAAATTACACACGAG+AGG | + | chr8_4:53016223-53016242 | None:intergenic | 30.0% | |
| TGATATTACAAGTGACATTG+TGG | - | chr8_4:53016263-53016282 | Msa1333010:CDS | 30.0% | |
| TTGTAGTTTATGAAGACTCA+AGG | - | chr8_4:53016354-53016373 | Msa1333010:CDS | 30.0% | |
| TGTAGTTTATGAAGACTCAA+GGG | - | chr8_4:53016355-53016374 | Msa1333010:CDS | 30.0% | |
| TTATGGCTAATAAGTCAATG+GGG | - | chr8_4:53016397-53016416 | Msa1333010:CDS | 30.0% | |
| ATATATCTTCCTGTAAGGAA+GGG | + | chr8_4:53016630-53016649 | None:intergenic | 30.0% | |
| ACATCATATATCTTCCTGTA+AGG | + | chr8_4:53016635-53016654 | None:intergenic | 30.0% | |
| !! | TTACTGGATTTGGTATTTTC+AGG | - | chr8_4:53016827-53016846 | Msa1333010:intron | 30.0% |
| AATTTGATCAACCTGTATCA+GGG | - | chr8_4:53016865-53016884 | Msa1333010:intron | 30.0% | |
| GTTGAATGCAAATTTGACAT+TGG | - | chr8_4:53017007-53017026 | Msa1333010:intron | 30.0% | |
| ATTGATTATTCTTCAGCCAA+TGG | - | chr8_4:53017040-53017059 | Msa1333010:intron | 30.0% | |
| TTGATTATTCTTCAGCCAAT+GGG | - | chr8_4:53017041-53017060 | Msa1333010:intron | 30.0% | |
| GAAGAGAGTGAATTAATTTC+AGG | - | chr8_4:53017306-53017325 | Msa1333010:intron | 30.0% | |
| ! | TGAGGAACATTTTTGTAAAG+GGG | + | chr8_4:53017586-53017605 | None:intergenic | 30.0% |
| ! | GTGAGGAACATTTTTGTAAA+GGG | + | chr8_4:53017587-53017606 | None:intergenic | 30.0% |
| TAATCCTAATGAGGTAAAAC+GGG | + | chr8_4:53017707-53017726 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTGGCTTTTGCAC+CGG | + | chr8_4:53017922-53017941 | None:intergenic | 30.0% |
| AACTGTATCTAAATGAGACA+CGG | - | chr8_4:53017963-53017982 | Msa1333010:intron | 30.0% | |
| GTAATTCGTTAAAGACTTCT+AGG | - | chr8_4:53018303-53018322 | Msa1333010:intron | 30.0% | |
| GTGGAAATTGTTTGTTTGTT+AGG | - | chr8_4:53018368-53018387 | Msa1333010:intron | 30.0% | |
| !! | TTCTGAATTTTAACCACATC+AGG | + | chr8_4:53018459-53018478 | None:intergenic | 30.0% |
| CTTTACCATCTTCAGAATAT+CGG | + | chr8_4:53018497-53018516 | None:intergenic | 30.0% | |
| GAGGAAGAAATAAAAACAGA+GGG | - | chr8_4:53018522-53018541 | Msa1333010:intron | 30.0% | |
| TATTCTGACAATGATTCTGA+GGG | - | chr8_4:53018633-53018652 | Msa1333010:CDS | 30.0% | |
| AATTAACAAATCGATGACAC+CGG | + | chr8_4:53018959-53018978 | None:intergenic | 30.0% | |
| GAAAGATGTTCCATATGATT+GGG | - | chr8_4:53019022-53019041 | Msa1333010:CDS | 30.0% | |
| !!! | TGTTTTGTTTCCCAATCATA+TGG | + | chr8_4:53019035-53019054 | None:intergenic | 30.0% |
| TTCTGATTATGCGCATATTT+GGG | + | chr8_4:53019635-53019654 | None:intergenic | 30.0% | |
| ATTCTGATTATGCGCATATT+TGG | + | chr8_4:53019636-53019655 | None:intergenic | 30.0% | |
| ! | ACAGAGAAGATGATAGTTTT+AGG | - | chr8_4:53019711-53019730 | Msa1333010:CDS | 30.0% |
| !! | CAGAGAAGATGATAGTTTTA+GGG | - | chr8_4:53019712-53019731 | Msa1333010:CDS | 30.0% |
| !!! | AGAGAAGATGATAGTTTTAG+GGG | - | chr8_4:53019713-53019732 | Msa1333010:CDS | 30.0% |
| ! | AGCATCAGCTAAATTTTTCA+AGG | - | chr8_4:53020026-53020045 | Msa1333010:CDS | 30.0% |
| !!! | CAGCTAAATTTTTCAAGGAA+AGG | - | chr8_4:53020031-53020050 | Msa1333010:CDS | 30.0% |
| !!! | CTAAATTTTTCAAGGAAAGG+TGG | - | chr8_4:53020034-53020053 | Msa1333010:CDS | 30.0% |
| !!! | AAATTTTTCAAGGAAAGGTG+GGG | - | chr8_4:53020036-53020055 | Msa1333010:CDS | 30.0% |
| TGGATAAGATTCTGAACTTA+AGG | + | chr8_4:53020350-53020369 | None:intergenic | 30.0% | |
| TCAGAATCTTATCCAAATTG+AGG | - | chr8_4:53020355-53020374 | Msa1333010:intron | 30.0% | |
| ACTTTAAATCCTCCTCAATT+TGG | + | chr8_4:53020370-53020389 | None:intergenic | 30.0% | |
| CTTATGCTATAATGACTTCA+TGG | + | chr8_4:53020411-53020430 | None:intergenic | 30.0% | |
| AGTCATTATAGCATAAGTCT+CGG | - | chr8_4:53020414-53020433 | Msa1333010:intron | 30.0% | |
| !!! | ACTCAACTTAGTTTTATTCG+GGG | - | chr8_4:53020579-53020598 | Msa1333010:intron | 30.0% |
| GCCGCCTAAAAATTAATATA+TGG | - | chr8_4:53020747-53020766 | Msa1333010:intron | 30.0% | |
| GAATCTGACATATTGTAGAA+TGG | - | chr8_4:53020780-53020799 | Msa1333010:intron | 30.0% | |
| !! | TTCCACTGGACATTTTATTT+TGG | - | chr8_4:53020962-53020981 | Msa1333010:intron | 30.0% |
| AACCAAAATAAAATGTCCAG+TGG | + | chr8_4:53020967-53020986 | None:intergenic | 30.0% | |
| !! | TAAATAAGTTTCTGGCAATG+AGG | - | chr8_4:53021371-53021390 | Msa1333010:CDS | 30.0% |
| ATATTTACACTGTGATGACT+AGG | - | chr8_4:53021458-53021477 | Msa1333010:CDS | 30.0% | |
| TTCAGAACCTTTCAGATAAA+GGG | - | chr8_4:53022370-53022389 | Msa1333010:intron | 30.0% | |
| AAGAAGAGAATCTCACAAAA+TGG | - | chr8_4:53022507-53022526 | Msa1333010:intron | 30.0% | |
| ! | CTAATGTGTCAAGAATTTTC+TGG | + | chr8_4:53022569-53022588 | None:intergenic | 30.0% |
| TCTTGACACATTAGCTAAAA+TGG | - | chr8_4:53022575-53022594 | Msa1333010:CDS | 30.0% | |
| CATTATTGAATACTTGGGAA+GGG | - | chr8_4:53022860-53022879 | Msa1333010:CDS | 30.0% | |
| CATATGAATGTTGATGTAAC+AGG | - | chr8_4:53023001-53023020 | Msa1333010:five_prime_UTR | 30.0% | |
| GATTATACGAACAAGAAGAC+AGG | + | chr8_4:53015720-53015739 | None:intergenic | 35.0% | |
| ! | TTTGGAACTGTGAAGAAAAC+TGG | + | chr8_4:53015771-53015790 | None:intergenic | 35.0% |
| CAAAATCATCATCATCATCG+TGG | + | chr8_4:53015816-53015835 | None:intergenic | 35.0% | |
| !! | CACGATGATGATGATGATTT+TGG | - | chr8_4:53015814-53015833 | Msa1333010:three_prime_UTR | 35.0% |
| AGTAGTAAAAACTGTGTCAG+AGG | - | chr8_4:53016108-53016127 | Msa1333010:CDS | 35.0% | |
| AAAAGATCCAGCAAAGTAAC+TGG | + | chr8_4:53016490-53016509 | None:intergenic | 35.0% | |
| TATATCTTCCTGTAAGGAAG+GGG | + | chr8_4:53016629-53016648 | None:intergenic | 35.0% | |
| CATATATCTTCCTGTAAGGA+AGG | + | chr8_4:53016631-53016650 | None:intergenic | 35.0% | |
| TCGGTTTAAATGAGAACACT+TGG | - | chr8_4:53016723-53016742 | Msa1333010:intron | 35.0% | |
| AATACCAAATCCAGTAAGCA+AGG | + | chr8_4:53016824-53016843 | None:intergenic | 35.0% | |
| CAATTTGATCAACCTGTATC+AGG | - | chr8_4:53016864-53016883 | Msa1333010:intron | 35.0% | |
| TCATTCCTCAAAATGTGAAG+TGG | - | chr8_4:53016899-53016918 | Msa1333010:intron | 35.0% | |
| TCATACGGTGATAGTAATCA+TGG | - | chr8_4:53017203-53017222 | Msa1333010:intron | 35.0% | |
| CATACGGTGATAGTAATCAT+GGG | - | chr8_4:53017204-53017223 | Msa1333010:intron | 35.0% | |
| ATAGTAATCATGGGTGTCTT+TGG | - | chr8_4:53017213-53017232 | Msa1333010:intron | 35.0% | |
| TAGTAATCATGGGTGTCTTT+GGG | - | chr8_4:53017214-53017233 | Msa1333010:intron | 35.0% | |
| AGATAGAACATCATGTTCAC+TGG | + | chr8_4:53017358-53017377 | None:intergenic | 35.0% | |
| TGTTCTATCTGATGAACAGT+TGG | - | chr8_4:53017368-53017387 | Msa1333010:intron | 35.0% | |
| GTTGGTCATACTTCTAACAA+GGG | + | chr8_4:53017478-53017497 | None:intergenic | 35.0% | |
| ! | CTTGTTAGAAGTATGACCAA+CGG | - | chr8_4:53017477-53017496 | Msa1333010:intron | 35.0% |
| ! | GGTGAGGAACATTTTTGTAA+AGG | + | chr8_4:53017588-53017607 | None:intergenic | 35.0% |
| !! | TAATGAGGTAAAACGGGTTA+AGG | + | chr8_4:53017701-53017720 | None:intergenic | 35.0% |
| ! | TTAACCCGTTTTACCTCATT+AGG | - | chr8_4:53017700-53017719 | Msa1333010:intron | 35.0% |
| GTCTCATTTAGATACAGTTG+TGG | + | chr8_4:53017962-53017981 | None:intergenic | 35.0% | |
| GATTAGTACCTTCCATTCTA+TGG | - | chr8_4:53018223-53018242 | Msa1333010:intron | 35.0% | |
| AGATGTGATTGTCCATAGAA+TGG | + | chr8_4:53018238-53018257 | None:intergenic | 35.0% | |
| TTCCTGAATAGAATTTACCG+TGG | - | chr8_4:53018349-53018368 | Msa1333010:intron | 35.0% | |
| TTCCACGGTAAATTCTATTC+AGG | + | chr8_4:53018354-53018373 | None:intergenic | 35.0% | |
| AATTCAGAATCCAGATGAAG+AGG | - | chr8_4:53018470-53018489 | Msa1333010:intron | 35.0% | |
| ! | TTCTGAAGATGGTAAAGTTC+TGG | - | chr8_4:53018500-53018519 | Msa1333010:intron | 35.0% |
| GGAGGAAGAAATAAAAACAG+AGG | - | chr8_4:53018521-53018540 | Msa1333010:intron | 35.0% | |
| AGTGAACCAGAATTATCACT+TGG | - | chr8_4:53018585-53018604 | Msa1333010:CDS | 35.0% | |
| TGATCACCAAGTGATAATTC+TGG | + | chr8_4:53018594-53018613 | None:intergenic | 35.0% | |
| CTCAGAATCATTGTCAGAAT+AGG | + | chr8_4:53018634-53018653 | None:intergenic | 35.0% | |
| CTATTCTGACAATGATTCTG+AGG | - | chr8_4:53018632-53018651 | Msa1333010:CDS | 35.0% | |
| TCACCAAATGACTTCTTAAG+GGG | + | chr8_4:53018701-53018720 | None:intergenic | 35.0% | |
| CTCACCAAATGACTTCTTAA+GGG | + | chr8_4:53018702-53018721 | None:intergenic | 35.0% | |
| ACTCACCAAATGACTTCTTA+AGG | + | chr8_4:53018703-53018722 | None:intergenic | 35.0% | |
| ! | CTTGAGGTTTTCTCATAAAG+AGG | + | chr8_4:53018753-53018772 | None:intergenic | 35.0% |
| !!! | GTTGACACTGATTTTTCTTG+AGG | + | chr8_4:53018769-53018788 | None:intergenic | 35.0% |
| TTCTAAGCTGCAAAAACACA+TGG | - | chr8_4:53018878-53018897 | Msa1333010:CDS | 35.0% | |
| ATTAACAAATCGATGACACC+GGG | + | chr8_4:53018958-53018977 | None:intergenic | 35.0% | |
| ! | GATGAACGACTGCAATATTT+TGG | - | chr8_4:53018987-53019006 | Msa1333010:CDS | 35.0% |
| GGAAAGATGTTCCATATGAT+TGG | - | chr8_4:53019021-53019040 | Msa1333010:CDS | 35.0% | |
| GGAATATGAAGACAGATTCA+GGG | - | chr8_4:53019127-53019146 | Msa1333010:CDS | 35.0% | |
| ! | ACATACTGTTTTCTACTAGC+AGG | + | chr8_4:53019251-53019270 | None:intergenic | 35.0% |
| AAAGGCAAATAATGCATCAC+AGG | - | chr8_4:53019360-53019379 | Msa1333010:CDS | 35.0% | |
| GAAACTGTGATTCTGATCAA+TGG | - | chr8_4:53019399-53019418 | Msa1333010:CDS | 35.0% | |
| ACAAGAACGATATACAGGAA+GGG | - | chr8_4:53019541-53019560 | Msa1333010:CDS | 35.0% | |
| TCTGATTATGCGCATATTTG+GGG | + | chr8_4:53019634-53019653 | None:intergenic | 35.0% | |
| AAATAGATCCTTGCATGCTA+GGG | - | chr8_4:53019976-53019995 | Msa1333010:CDS | 35.0% | |
| AATCCGGTGTCTTGATTAAT+AGG | - | chr8_4:53020131-53020150 | Msa1333010:CDS | 35.0% | |
| ATCCGGTGTCTTGATTAATA+GGG | - | chr8_4:53020132-53020151 | Msa1333010:CDS | 35.0% | |
| TTCCCTATTAATCAAGACAC+CGG | + | chr8_4:53020137-53020156 | None:intergenic | 35.0% | |
| CTTGATTAATAGGGAAGGAA+AGG | - | chr8_4:53020141-53020160 | Msa1333010:CDS | 35.0% | |
| AGGGAAGGAAAGGTAAAATT+AGG | - | chr8_4:53020151-53020170 | Msa1333010:CDS | 35.0% | |
| GGGAAGGAAAGGTAAAATTA+GGG | - | chr8_4:53020152-53020171 | Msa1333010:CDS | 35.0% | |
| AACAATATATAGCTGCATGC+GGG | + | chr8_4:53020274-53020293 | None:intergenic | 35.0% | |
| GAACAATATATAGCTGCATG+CGG | + | chr8_4:53020275-53020294 | None:intergenic | 35.0% | |
| GAATCTTATCCAAATTGAGG+AGG | - | chr8_4:53020358-53020377 | Msa1333010:intron | 35.0% | |
| TACCTTCACTAGATCTGTAA+TGG | - | chr8_4:53020706-53020725 | Msa1333010:intron | 35.0% | |
| ACCTTCACTAGATCTGTAAT+GGG | - | chr8_4:53020707-53020726 | Msa1333010:intron | 35.0% | |
| ! | AATTAATATATGGGCTGTGC+TGG | - | chr8_4:53020757-53020776 | Msa1333010:intron | 35.0% |
| ! | ATTAATATATGGGCTGTGCT+GGG | - | chr8_4:53020758-53020777 | Msa1333010:intron | 35.0% |
| !! | ACATATTGTAGAATGGGTTG+TGG | - | chr8_4:53020787-53020806 | Msa1333010:intron | 35.0% |
| ! | ATTGATTACAGCTTTTCCAC+TGG | - | chr8_4:53020948-53020967 | Msa1333010:intron | 35.0% |
| CTGCATACATGATTATGTAG+TGG | + | chr8_4:53021048-53021067 | None:intergenic | 35.0% | |
| TTTGAATGCATGGATCTGAT+AGG | - | chr8_4:53021229-53021248 | Msa1333010:intron | 35.0% | |
| ! | ATTTTTGTGTGTGTAGAGAG+TGG | - | chr8_4:53021306-53021325 | Msa1333010:CDS | 35.0% |
| TACATGTTTGGTCCAATTCA+TGG | - | chr8_4:53021334-53021353 | Msa1333010:CDS | 35.0% | |
| TCCAATTCATGGATCTTGTA+TGG | - | chr8_4:53021345-53021364 | Msa1333010:CDS | 35.0% | |
| ACCATACAAGATCCATGAAT+TGG | + | chr8_4:53021349-53021368 | None:intergenic | 35.0% | |
| !! | TGCGTGTCATTCATTTTTAG+AGG | + | chr8_4:53021738-53021757 | None:intergenic | 35.0% |
| AGAAACAGAAACAGCATGTT+AGG | + | chr8_4:53021909-53021928 | None:intergenic | 35.0% | |
| ATACAATGCTTGACAGAAAC+AGG | + | chr8_4:53021950-53021969 | None:intergenic | 35.0% | |
| TCATATCAGGCATTCTAACT+CGG | - | chr8_4:53021986-53022005 | Msa1333010:CDS | 35.0% | |
| ! | TGATTGAAAGTGCAACAATG+AGG | + | chr8_4:53022081-53022100 | None:intergenic | 35.0% |
| !! | TTTTGATGACTCTCGTAAGA+AGG | - | chr8_4:53022293-53022312 | Msa1333010:CDS | 35.0% |
| !!! | TTTTGAGACGTCAAGTTTGA+TGG | + | chr8_4:53022319-53022338 | None:intergenic | 35.0% |
| CTTCAGAACCTTTCAGATAA+AGG | - | chr8_4:53022369-53022388 | Msa1333010:intron | 35.0% | |
| AATAATTCTGAACCGCAGAT+TGG | - | chr8_4:53022531-53022550 | Msa1333010:intron | 35.0% | |
| TAGCTAAAATGGAGAAACGT+AGG | - | chr8_4:53022586-53022605 | Msa1333010:CDS | 35.0% | |
| AGCTAAAATGGAGAAACGTA+GGG | - | chr8_4:53022587-53022606 | Msa1333010:CDS | 35.0% | |
| ! | TTTGAAGTTGAACACTGACT+CGG | - | chr8_4:53022689-53022708 | Msa1333010:CDS | 35.0% |
| TAGGTGAAATAAAGCAACAG+AGG | - | chr8_4:53022721-53022740 | Msa1333010:CDS | 35.0% | |
| ! | AACGGCAGAAAGTTTTTATG+AGG | - | chr8_4:53022815-53022834 | Msa1333010:CDS | 35.0% |
| GCATTATTGAATACTTGGGA+AGG | - | chr8_4:53022859-53022878 | Msa1333010:CDS | 35.0% | |
| !! | TCATTGTCATGGTGTTGTTG+CGG | + | chr8_4:53015889-53015908 | None:intergenic | 40.0% |
| CAACAACACCATGACAATGA+TGG | - | chr8_4:53015889-53015908 | Msa1333010:three_prime_UTR | 40.0% | |
| ATTCAAACCATCTTCGCTCT+CGG | + | chr8_4:53015950-53015969 | None:intergenic | 40.0% | |
| TGTTGTTCATCCTGAACGTT+TGG | - | chr8_4:53016014-53016033 | Msa1333010:CDS | 40.0% | |
| TGGTTATTGTCCAAACGTTC+AGG | + | chr8_4:53016027-53016046 | None:intergenic | 40.0% | |
| TGAACGTTTGGACAATAACC+AGG | - | chr8_4:53016026-53016045 | Msa1333010:CDS | 40.0% | |
| ! | AGTTCTGATGCACAACATTG+TGG | - | chr8_4:53016081-53016100 | Msa1333010:CDS | 40.0% |
| AGTAAAAACTGTGTCAGAGG+TGG | - | chr8_4:53016111-53016130 | Msa1333010:CDS | 40.0% | |
| GATTGTTCATCTTTCGCTCA+AGG | - | chr8_4:53016429-53016448 | Msa1333010:CDS | 40.0% | |
| TTCATCTTTCGCTCAAGGAA+GGG | - | chr8_4:53016434-53016453 | Msa1333010:CDS | 40.0% | |
| ! | TCAAGTTCCAGTTACTTTGC+TGG | - | chr8_4:53016480-53016499 | Msa1333010:CDS | 40.0% |
| ! | TTGCTGGATCTTTTCTTCCT+TGG | - | chr8_4:53016496-53016515 | Msa1333010:intron | 40.0% |
| ! | GATCTTTTCTTCCTTGGCAT+TGG | - | chr8_4:53016502-53016521 | Msa1333010:intron | 40.0% |
| ATAAATTTGAGGAGAAGCCG+TGG | - | chr8_4:53016663-53016682 | Msa1333010:intron | 40.0% | |
| GAAGCAATACTGTTCGTCTT+TGG | - | chr8_4:53016745-53016764 | Msa1333010:intron | 40.0% | |
| GCAAGGTCAAACAACTTAAC+TGG | + | chr8_4:53016807-53016826 | None:intergenic | 40.0% | |
| AGTTGTTTGACCTTGCTTAC+TGG | - | chr8_4:53016811-53016830 | Msa1333010:intron | 40.0% | |
| TTGACCTTGCTTACTGGATT+TGG | - | chr8_4:53016817-53016836 | Msa1333010:intron | 40.0% | |
| TTGATCAAATTGCTCCTGTG+TGG | + | chr8_4:53016856-53016875 | None:intergenic | 40.0% | |
| ! | GCATACCACTTCACATTTTG+AGG | + | chr8_4:53016907-53016926 | None:intergenic | 40.0% |
| ACATCAGAATCTATACTGCG+TGG | + | chr8_4:53017128-53017147 | None:intergenic | 40.0% | |
| CTTGTGCTGTAGTTGTCATA+CGG | - | chr8_4:53017188-53017207 | Msa1333010:intron | 40.0% | |
| TCAAGTACGTTGCATTTGAC+AGG | + | chr8_4:53017279-53017298 | None:intergenic | 40.0% | |
| CGTTGGTCATACTTCTAACA+AGG | + | chr8_4:53017479-53017498 | None:intergenic | 40.0% | |
| !!! | CATTGTTATTTTGGTGCCGT+TGG | + | chr8_4:53017496-53017515 | None:intergenic | 40.0% |
| GGAAGGAAATTGAAGGTTGA+GGG | + | chr8_4:53017609-53017628 | None:intergenic | 40.0% | |
| AGGAAGGAAATTGAAGGTTG+AGG | + | chr8_4:53017610-53017629 | None:intergenic | 40.0% | |
| GTGTCAAAAGCTCCATCATT+AGG | - | chr8_4:53017672-53017691 | Msa1333010:intron | 40.0% | |
| GGGTTAAGGAAACCTAATGA+TGG | + | chr8_4:53017687-53017706 | None:intergenic | 40.0% | |
| TGTATCTAAATGAGACACGG+TGG | - | chr8_4:53017966-53017985 | Msa1333010:intron | 40.0% | |
| ! | TGGAGCATAGTTGTGTCTTT+TGG | - | chr8_4:53018075-53018094 | Msa1333010:intron | 40.0% |
| GTGATTGTCCATAGAATGGA+AGG | + | chr8_4:53018234-53018253 | None:intergenic | 40.0% | |
| ! | TTTTAACCACATCAGGATCC+AGG | + | chr8_4:53018452-53018471 | None:intergenic | 40.0% |
| ! | TGAAGATGGTAAAGTTCTGG+AGG | - | chr8_4:53018503-53018522 | Msa1333010:intron | 40.0% |
| TAGCCCCTTAAGAAGTCATT+TGG | - | chr8_4:53018695-53018714 | Msa1333010:CDS | 40.0% | |
| AAATAGAGGTCCAGTACAAC+AGG | - | chr8_4:53018821-53018840 | Msa1333010:CDS | 40.0% | |
| !! | TGTTTTTGCAGCTTAGAACC+GGG | + | chr8_4:53018876-53018895 | None:intergenic | 40.0% |
| !! | GTGTTTTTGCAGCTTAGAAC+CGG | + | chr8_4:53018877-53018896 | None:intergenic | 40.0% |
| !! | TGACAGAAATGTTGATGACC+TGG | - | chr8_4:53019073-53019092 | Msa1333010:CDS | 40.0% |
| !! | AAATGTTGATGACCTGGATC+AGG | - | chr8_4:53019079-53019098 | Msa1333010:CDS | 40.0% |
| GGGAATATGAAGACAGATTC+AGG | - | chr8_4:53019126-53019145 | Msa1333010:CDS | 40.0% | |
| ATATGAAGACAGATTCAGGG+AGG | - | chr8_4:53019130-53019149 | Msa1333010:CDS | 40.0% | |
| TCAGAAAAAGTGGGGATAAG+AGG | - | chr8_4:53019168-53019187 | Msa1333010:CDS | 40.0% | |
| CAGAAAAAGTGGGGATAAGA+GGG | - | chr8_4:53019169-53019188 | Msa1333010:CDS | 40.0% | |
| AGTCAAGGCAGTTTCATTCA+AGG | - | chr8_4:53019303-53019322 | Msa1333010:CDS | 40.0% | |
| CTAAAGATAGGGAAGCTCAA+AGG | - | chr8_4:53019342-53019361 | Msa1333010:CDS | 40.0% | |
| ! | TTCTTTTGCTGAGCGAGAAA+TGG | - | chr8_4:53019469-53019488 | Msa1333010:CDS | 40.0% |
| AGAGCACAAGAACGATATAC+AGG | - | chr8_4:53019536-53019555 | Msa1333010:CDS | 40.0% | |
| CACAAGAACGATATACAGGA+AGG | - | chr8_4:53019540-53019559 | Msa1333010:CDS | 40.0% | |
| CAAGAACGATATACAGGAAG+GGG | - | chr8_4:53019542-53019561 | Msa1333010:CDS | 40.0% | |
| TAAAACTCGCACTCATCTAC+AGG | + | chr8_4:53019830-53019849 | None:intergenic | 40.0% | |
| TCCAGTGTGAAACCTCATAT+GGG | + | chr8_4:53019859-53019878 | None:intergenic | 40.0% | |
| GAAATAGATCCTTGCATGCT+AGG | - | chr8_4:53019975-53019994 | Msa1333010:CDS | 40.0% | |
| GTGCTGAGATGCAATAAATC+CGG | - | chr8_4:53020115-53020134 | Msa1333010:CDS | 40.0% | |
| GGTGTCTTGATTAATAGGGA+AGG | - | chr8_4:53020136-53020155 | Msa1333010:CDS | 40.0% | |
| GAGATGTTGAGTAGCTCATA+TGG | + | chr8_4:53020217-53020236 | None:intergenic | 40.0% | |
| ATGAGCTACTCAACATCTCT+TGG | - | chr8_4:53020218-53020237 | Msa1333010:CDS | 40.0% | |
| ATTGCTGTCATGTGACTAAG+AGG | - | chr8_4:53020638-53020657 | Msa1333010:intron | 40.0% | |
| CATGTGACTAAGAGGTTTAC+AGG | - | chr8_4:53020646-53020665 | Msa1333010:intron | 40.0% | |
| CTAAGAGGTTTACAGGTTTG+TGG | - | chr8_4:53020653-53020672 | Msa1333010:intron | 40.0% | |
| ACCCATTACAGATCTAGTGA+AGG | + | chr8_4:53020711-53020730 | None:intergenic | 40.0% | |
| !! | CTAGATCTGTAATGGGTCTT+TGG | - | chr8_4:53020714-53020733 | Msa1333010:intron | 40.0% |
| !! | ATCTGTAATGGGTCTTTGGT+GGG | - | chr8_4:53020718-53020737 | Msa1333010:intron | 40.0% |
| CATGATTGCTATCACCAACA+TGG | - | chr8_4:53020814-53020833 | Msa1333010:intron | 40.0% | |
| ACCAACATGGATAGTTAGCA+TGG | - | chr8_4:53020827-53020846 | Msa1333010:intron | 40.0% | |
| ATAGTTAGCATGGCTGATCA+GGG | - | chr8_4:53020837-53020856 | Msa1333010:intron | 40.0% | |
| TCTTGTTGCAAGGTATAGAC+TGG | + | chr8_4:53021023-53021042 | None:intergenic | 40.0% | |
| TGTTTGTGACATCAAGCATG+TGG | - | chr8_4:53021108-53021127 | Msa1333010:intron | 40.0% | |
| TGTCCTTCAAATATCTGCAC+TGG | - | chr8_4:53021265-53021284 | Msa1333010:intron | 40.0% | |
| ACACCAGTGCAGATATTTGA+AGG | + | chr8_4:53021271-53021290 | None:intergenic | 40.0% | |
| ! | AGAGTGGACTCTTACATGTT+TGG | - | chr8_4:53021322-53021341 | Msa1333010:CDS | 40.0% |
| CATTTCCAGATGAGCACAAA+TGG | + | chr8_4:53021412-53021431 | None:intergenic | 40.0% | |
| TGGAGTCCCATTTACATGAT+TGG | - | chr8_4:53021624-53021643 | Msa1333010:CDS | 40.0% | |
| TTGAGTATATGAGCCAGCAT+AGG | - | chr8_4:53021778-53021797 | Msa1333010:intron | 40.0% | |
| AACGCAACTTATACCTATGC+TGG | + | chr8_4:53021794-53021813 | None:intergenic | 40.0% | |
| !! | TAGTGCTAGTTCTAGAACAG+TGG | - | chr8_4:53022116-53022135 | Msa1333010:intron | 40.0% |
| TGTATCATTTCGCATCAGTC+TGG | + | chr8_4:53022223-53022242 | None:intergenic | 40.0% | |
| ACACTTCAAAATGTGGATCG+AGG | - | chr8_4:53022240-53022259 | Msa1333010:CDS | 40.0% | |
| CACTTCAAAATGTGGATCGA+GGG | - | chr8_4:53022241-53022260 | Msa1333010:CDS | 40.0% | |
| CTTTCTGCCCTTTATCTGAA+AGG | + | chr8_4:53022380-53022399 | None:intergenic | 40.0% | |
| TCAGATAAAGGGCAGAAAGA+AGG | - | chr8_4:53022381-53022400 | Msa1333010:intron | 40.0% | |
| TAAAGGGCAGAAAGAAGGTT+TGG | - | chr8_4:53022386-53022405 | Msa1333010:intron | 40.0% | |
| GAAGGTTTGGATGTAGAAGA+AGG | - | chr8_4:53022399-53022418 | Msa1333010:intron | 40.0% | |
| TCTGGATACAGAAACTTCGA+CGG | + | chr8_4:53022448-53022467 | None:intergenic | 40.0% | |
| !! | ATCCAGAAGAGTTGTTTCTG+AGG | - | chr8_4:53022461-53022480 | Msa1333010:intron | 40.0% |
| ATCCTCAGAAACAACTCTTC+TGG | + | chr8_4:53022466-53022485 | None:intergenic | 40.0% | |
| ! | TGAACCGCAGATTGGTAATT+TGG | - | chr8_4:53022539-53022558 | Msa1333010:intron | 40.0% |
| CTGTCCAAATTACCAATCTG+CGG | + | chr8_4:53022546-53022565 | None:intergenic | 40.0% | |
| GCTTCTTTATTCATACCGAC+TGG | + | chr8_4:53022627-53022646 | None:intergenic | 40.0% | |
| ACTTCGTTATTCGAACCGAT+GGG | + | chr8_4:53022660-53022679 | None:intergenic | 40.0% | |
| TACTTCGTTATTCGAACCGA+TGG | + | chr8_4:53022661-53022680 | None:intergenic | 40.0% | |
| TGAAATAAAGCAACAGAGGC+CGG | - | chr8_4:53022725-53022744 | Msa1333010:CDS | 40.0% | |
| ACATTGTACACCCTGATTCT+TGG | - | chr8_4:53022935-53022954 | Msa1333010:five_prime_UTR | 40.0% | |
| CATTGTACACCCTGATTCTT+GGG | - | chr8_4:53022936-53022955 | Msa1333010:five_prime_UTR | 40.0% | |
| CTATCAAAGCCCAAGAATCA+GGG | + | chr8_4:53022948-53022967 | None:intergenic | 40.0% | |
| TCTATCAAAGCCCAAGAATC+AGG | + | chr8_4:53022949-53022968 | None:intergenic | 40.0% | |
| AGAAGACAGGTTATGTGCTG+TGG | + | chr8_4:53015707-53015726 | None:intergenic | 45.0% | |
| AGTGGCTAGAACTTGTAGGT+CGG | + | chr8_4:53015851-53015870 | None:intergenic | 45.0% | |
| CAACACCATGACAATGATGG+CGG | - | chr8_4:53015892-53015911 | Msa1333010:three_prime_UTR | 45.0% | |
| AACTGTGTCAGAGGTGGTTA+CGG | - | chr8_4:53016117-53016136 | Msa1333010:CDS | 45.0% | |
| GTTCATCTTTCGCTCAAGGA+AGG | - | chr8_4:53016433-53016452 | Msa1333010:CDS | 45.0% | |
| TCATCTTTCGCTCAAGGAAG+GGG | - | chr8_4:53016435-53016454 | Msa1333010:CDS | 45.0% | |
| GTAAACACTGACCAATGCCA+AGG | + | chr8_4:53016516-53016535 | None:intergenic | 45.0% | |
| TAATCTGTTATGTCGGCACC+GGG | + | chr8_4:53016695-53016714 | None:intergenic | 45.0% | |
| GTAATCTGTTATGTCGGCAC+CGG | + | chr8_4:53016696-53016715 | None:intergenic | 45.0% | |
| !! | GTATTTTCAGGCATCCACAC+AGG | - | chr8_4:53016839-53016858 | Msa1333010:intron | 45.0% |
| GAAAGTAAGCTCCCTGATAC+AGG | + | chr8_4:53016879-53016898 | None:intergenic | 45.0% | |
| ACCTGTATTGCTCTTCCCAT+TGG | + | chr8_4:53017059-53017078 | None:intergenic | 45.0% | |
| ATGGGAAGAGCAATACAGGT+TGG | - | chr8_4:53017059-53017078 | Msa1333010:intron | 45.0% | |
| TGGGAAGAGCAATACAGGTT+GGG | - | chr8_4:53017060-53017079 | Msa1333010:intron | 45.0% | |
| CAACTACAGCACAAGAGTCA+TGG | + | chr8_4:53017183-53017202 | None:intergenic | 45.0% | |
| TTTGGGCAGATCAATGTGCA+TGG | - | chr8_4:53017231-53017250 | Msa1333010:intron | 45.0% | |
| TTGGGCAGATCAATGTGCAT+GGG | - | chr8_4:53017232-53017251 | Msa1333010:intron | 45.0% | |
| ! | AAACAATCCGAAGTGCCTTC+TGG | - | chr8_4:53017399-53017418 | Msa1333010:intron | 45.0% |
| ACAAACCTTTCCTGACCAGA+AGG | + | chr8_4:53017417-53017436 | None:intergenic | 45.0% | |
| GAAATTGAAGGTTGAGGGTG+AGG | + | chr8_4:53017604-53017623 | None:intergenic | 45.0% | |
| GAGCTGAGGAAGGAAATTGA+AGG | + | chr8_4:53017616-53017635 | None:intergenic | 45.0% | |
| ! | TGATGGAGCTTTTGACACAG+TGG | + | chr8_4:53017670-53017689 | None:intergenic | 45.0% |
| AGCCACAAACCAAGTTGCTT+GGG | - | chr8_4:53017759-53017778 | Msa1333010:intron | 45.0% | |
| AATGAGACACGGTGGTTTCA+TGG | - | chr8_4:53017974-53017993 | Msa1333010:intron | 45.0% | |
| ! | CGAGTGCAAGAACTCTGAAA+TGG | + | chr8_4:53018000-53018019 | None:intergenic | 45.0% |
| TCACAATCGCAGAAATGACC+TGG | - | chr8_4:53018431-53018450 | Msa1333010:intron | 45.0% | |
| AAATGACCTGGATCCTGATG+TGG | - | chr8_4:53018443-53018462 | Msa1333010:intron | 45.0% | |
| GAATATCGGTCCTCTTCATC+TGG | + | chr8_4:53018483-53018502 | None:intergenic | 45.0% | |
| ! | GAGGACCGATATTCTGAAGA+TGG | - | chr8_4:53018489-53018508 | Msa1333010:intron | 45.0% |
| !! | AATTCTGGTTCACTACAGCC+TGG | + | chr8_4:53018579-53018598 | None:intergenic | 45.0% |
| ! | CATTTGGTGAGTTCTGACAC+TGG | - | chr8_4:53018711-53018730 | Msa1333010:CDS | 45.0% |
| !! | GAGTTCTGACACTGGCTTAA+AGG | - | chr8_4:53018719-53018738 | Msa1333010:CDS | 45.0% |
| CAAACTGGTAGACATATGCC+CGG | - | chr8_4:53018855-53018874 | Msa1333010:CDS | 45.0% | |
| GATTCCTTCCACTGGATCTA+GGG | + | chr8_4:53018929-53018948 | None:intergenic | 45.0% | |
| AGATTCCTTCCACTGGATCT+AGG | + | chr8_4:53018930-53018949 | None:intergenic | 45.0% | |
| ACCTGAGTCTCCTCTCATAT+AGG | - | chr8_4:53019279-53019298 | Msa1333010:CDS | 45.0% | |
| CCTGAGTCTCCTCTCATATA+GGG | - | chr8_4:53019280-53019299 | Msa1333010:CDS | 45.0% | |
| TCCTCTCATATAGGGAGTCA+AGG | - | chr8_4:53019288-53019307 | Msa1333010:CDS | 45.0% | |
| ! | TTCAAGGCATTCCTCCTTTC+CGG | - | chr8_4:53019319-53019338 | Msa1333010:CDS | 45.0% |
| CTCCTTTCCGGCTAAAGATA+GGG | - | chr8_4:53019331-53019350 | Msa1333010:CDS | 45.0% | |
| TTCCCTATCTTTAGCCGGAA+AGG | + | chr8_4:53019336-53019355 | None:intergenic | 45.0% | |
| TGAGCTTCCCTATCTTTAGC+CGG | + | chr8_4:53019341-53019360 | None:intergenic | 45.0% | |
| !! | GCATCACAGGCGTCATTTTA+AGG | - | chr8_4:53019373-53019392 | Msa1333010:CDS | 45.0% |
| TCTCGCTCAGCAAAAGAAGA+GGG | + | chr8_4:53019467-53019486 | None:intergenic | 45.0% | |
| TTCTCGCTCAGCAAAAGAAG+AGG | + | chr8_4:53019468-53019487 | None:intergenic | 45.0% | |
| AAGGGGTAGACATCATGACA+GGG | - | chr8_4:53019559-53019578 | Msa1333010:CDS | 45.0% | |
| TGTGAAACCTCATATGGGAG+GGG | + | chr8_4:53019854-53019873 | None:intergenic | 45.0% | |
| GTGTGAAACCTCATATGGGA+GGG | + | chr8_4:53019855-53019874 | None:intergenic | 45.0% | |
| AGTGTGAAACCTCATATGGG+AGG | + | chr8_4:53019856-53019875 | None:intergenic | 45.0% | |
| TCCCATATGAGGTTTCACAC+TGG | - | chr8_4:53019855-53019874 | Msa1333010:CDS | 45.0% | |
| GTCCAGTGTGAAACCTCATA+TGG | + | chr8_4:53019860-53019879 | None:intergenic | 45.0% | |
| CTTGCATGTCTTTCGTGCAT+TGG | + | chr8_4:53019956-53019975 | None:intergenic | 45.0% | |
| TTATTGCATCTCAGCACCGT+CGG | + | chr8_4:53020112-53020131 | None:intergenic | 45.0% | |
| !! | TGCGCTAAGGCTCTTTTTCA+AGG | + | chr8_4:53020609-53020628 | None:intergenic | 45.0% |
| CAATTCCAACTGTTGCGCTA+AGG | + | chr8_4:53020622-53020641 | None:intergenic | 45.0% | |
| CCTTACTTTGCATGAGCAAG+AGG | + | chr8_4:53020685-53020704 | None:intergenic | 45.0% | |
| CCTCTTGCTCATGCAAAGTA+AGG | - | chr8_4:53020682-53020701 | Msa1333010:intron | 45.0% | |
| !! | GATCTGTAATGGGTCTTTGG+TGG | - | chr8_4:53020717-53020736 | Msa1333010:intron | 45.0% |
| GCCATGCTAACTATCCATGT+TGG | + | chr8_4:53020831-53020850 | None:intergenic | 45.0% | |
| GATAGTTAGCATGGCTGATC+AGG | - | chr8_4:53020836-53020855 | Msa1333010:intron | 45.0% | |
| !! | TGTAGTGGACTCTTGTTGCA+AGG | + | chr8_4:53021033-53021052 | None:intergenic | 45.0% |
| CTTAGCCATTTGTGCTCATC+TGG | - | chr8_4:53021404-53021423 | Msa1333010:CDS | 45.0% | |
| GGAAATGTTGTCTCTCCGTA+TGG | - | chr8_4:53021425-53021444 | Msa1333010:CDS | 45.0% | |
| GACTGCAGAATCAGTCACAA+GGG | + | chr8_4:53022189-53022208 | None:intergenic | 45.0% | |
| TGACTGCAGAATCAGTCACA+AGG | + | chr8_4:53022190-53022209 | None:intergenic | 45.0% | |
| CTGATTCTGCAGTCAGCAAA+AGG | - | chr8_4:53022195-53022214 | Msa1333010:CDS | 45.0% | |
| ! | TGCAGAGAAGCGTAAAGCTT+TGG | - | chr8_4:53022266-53022285 | Msa1333010:CDS | 45.0% |
| ! | GAGAAGCGTAAAGCTTTGGT+AGG | - | chr8_4:53022270-53022289 | Msa1333010:CDS | 45.0% |
| GATACAGAAACTTCGACGGA+TGG | + | chr8_4:53022444-53022463 | None:intergenic | 45.0% | |
| !! | ACTGACTCGGCAGTTGATAT+AGG | - | chr8_4:53022702-53022721 | Msa1333010:CDS | 45.0% |
| !! | ATATATGAATTTAAAAAATT+TGG | - | chr8_4:53022968-53022987 | Msa1333010:five_prime_UTR | 5.0% |
| TATGTGCTGTGGCCTATAGG+CGG | + | chr8_4:53015696-53015715 | None:intergenic | 50.0% | |
| GGTTATGTGCTGTGGCCTAT+AGG | + | chr8_4:53015699-53015718 | None:intergenic | 50.0% | |
| GAGGAGTGGCTAGAACTTGT+AGG | + | chr8_4:53015855-53015874 | None:intergenic | 50.0% | |
| !! | TTGTCATGGTGTTGTTGCGG+AGG | + | chr8_4:53015886-53015905 | None:intergenic | 50.0% |
| ! | TTGTCCTGCTGCTTGTGTTG+AGG | - | chr8_4:53015990-53016009 | Msa1333010:CDS | 50.0% |
| ACATCCTCAACACAAGCAGC+AGG | + | chr8_4:53015997-53016016 | None:intergenic | 50.0% | |
| CCTGATCAATGCACTCTTCC+TGG | + | chr8_4:53016047-53016066 | None:intergenic | 50.0% | |
| ! | CCAGGAAGAGTGCATTGATC+AGG | - | chr8_4:53016044-53016063 | Msa1333010:CDS | 50.0% |
| CATCTTTCGCTCAAGGAAGG+GGG | - | chr8_4:53016436-53016455 | Msa1333010:CDS | 50.0% | |
| ATCTTTCGCTCAAGGAAGGG+GGG | - | chr8_4:53016437-53016456 | Msa1333010:CDS | 50.0% | |
| GACTTCTTCCCCTTCCTTAC+AGG | - | chr8_4:53016618-53016637 | Msa1333010:intron | 50.0% | |
| AATTTGAGGAGAAGCCGTGG+AGG | - | chr8_4:53016666-53016685 | Msa1333010:intron | 50.0% | |
| GCCAATGGGAAGAGCAATAC+AGG | - | chr8_4:53017055-53017074 | Msa1333010:intron | 50.0% | |
| GGGAAGAGCAATACAGGTTG+GGG | - | chr8_4:53017061-53017080 | Msa1333010:intron | 50.0% | |
| ! | AATACAGGTTGGGGACAGTG+TGG | - | chr8_4:53017070-53017089 | Msa1333010:intron | 50.0% |
| !! | GACAGGAGCAGAAGTGTTGT+CGG | + | chr8_4:53017262-53017281 | None:intergenic | 50.0% |
| !! | TTCCTGACCAGAAGGCACTT+CGG | + | chr8_4:53017409-53017428 | None:intergenic | 50.0% |
| AAGTGCCTTCTGGTCAGGAA+AGG | - | chr8_4:53017409-53017428 | Msa1333010:intron | 50.0% | |
| TCAGCTCCAGATCACTGAAG+CGG | - | chr8_4:53017629-53017648 | Msa1333010:intron | 50.0% | |
| TTCAGACCGCTTCAGTGATC+TGG | + | chr8_4:53017638-53017657 | None:intergenic | 50.0% | |
| GAGCCACAAACCAAGTTGCT+TGG | - | chr8_4:53017758-53017777 | Msa1333010:intron | 50.0% | |
| ! | AGCCCAAGCAACTTGGTTTG+TGG | + | chr8_4:53017764-53017783 | None:intergenic | 50.0% |
| ATTAGTCGCCCACCATTGGT+GGG | - | chr8_4:53017889-53017908 | Msa1333010:intron | 50.0% | |
| GTTTCCAACCCACCAATGGT+GGG | + | chr8_4:53017900-53017919 | None:intergenic | 50.0% | |
| !! | ACCATTGGTGGGTTGGAAAC+CGG | - | chr8_4:53017900-53017919 | Msa1333010:intron | 50.0% |
| TACGCACAGCTGTGTCAAGA+TGG | - | chr8_4:53018055-53018074 | Msa1333010:intron | 50.0% | |
| GACACATGCAGTGAAGATCC+AGG | - | chr8_4:53018558-53018577 | Msa1333010:CDS | 50.0% | |
| GTCCAGTACAACAGGATCAG+AGG | - | chr8_4:53018829-53018848 | Msa1333010:CDS | 50.0% | |
| TGCCTCTGATCCTGTTGTAC+TGG | + | chr8_4:53018834-53018853 | None:intergenic | 50.0% | |
| !! | CAGGATCAGAGGCATCAAAC+TGG | - | chr8_4:53018840-53018859 | Msa1333010:CDS | 50.0% |
| TCTCACATCCCTAGATCCAG+TGG | - | chr8_4:53018918-53018937 | Msa1333010:CDS | 50.0% | |
| ACATCCCTAGATCCAGTGGA+AGG | - | chr8_4:53018922-53018941 | Msa1333010:CDS | 50.0% | |
| GGAAGACAGATTCCTTCCAC+TGG | + | chr8_4:53018937-53018956 | None:intergenic | 50.0% | |
| GTGGAAGGAATCTGTCTTCC+CGG | - | chr8_4:53018937-53018956 | Msa1333010:CDS | 50.0% | |
| CACTGTATACTGCCTGATCC+AGG | + | chr8_4:53019094-53019113 | None:intergenic | 50.0% | |
| CCCTATATGAGAGGAGACTC+AGG | + | chr8_4:53019283-53019302 | None:intergenic | 50.0% | |
| GCCTTGACTCCCTATATGAG+AGG | + | chr8_4:53019292-53019311 | None:intergenic | 50.0% | |
| CCTATCTTTAGCCGGAAAGG+AGG | + | chr8_4:53019333-53019352 | None:intergenic | 50.0% | |
| CCTCCTTTCCGGCTAAAGAT+AGG | - | chr8_4:53019330-53019349 | Msa1333010:CDS | 50.0% | |
| GAAGGGGTAGACATCATGAC+AGG | - | chr8_4:53019558-53019577 | Msa1333010:CDS | 50.0% | |
| CATAACCATGCCACCAACAG+AGG | - | chr8_4:53019746-53019765 | Msa1333010:CDS | 50.0% | |
| ACTGATGCTGCTGAAGACGA+AGG | - | chr8_4:53019791-53019810 | Msa1333010:CDS | 50.0% | |
| ! | GTTTTACCCCCTCCCATATG+AGG | - | chr8_4:53019844-53019863 | Msa1333010:CDS | 50.0% |
| GTGAAACCTCATATGGGAGG+GGG | + | chr8_4:53019853-53019872 | None:intergenic | 50.0% | |
| GCATGTCTTTCGTGCATTGG+AGG | + | chr8_4:53019953-53019972 | None:intergenic | 50.0% | |
| TCTTTGCACCCTAGCATGCA+AGG | + | chr8_4:53019987-53020006 | None:intergenic | 50.0% | |
| TAGAGATCACTCTCACCCGA+CGG | - | chr8_4:53020093-53020112 | Msa1333010:CDS | 50.0% | |
| TATTGCATCTCAGCACCGTC+GGG | + | chr8_4:53020111-53020130 | None:intergenic | 50.0% | |
| AAGAGCCTTAGCGCAACAGT+TGG | - | chr8_4:53020614-53020633 | Msa1333010:intron | 50.0% | |
| GTCACAAACACACACACCCA+AGG | + | chr8_4:53021098-53021117 | None:intergenic | 50.0% | |
| !! | GAGCGTTTTAAGCAGCCAGT+CGG | - | chr8_4:53022609-53022628 | Msa1333010:CDS | 50.0% |
| TTCCAGCGTCTCTTTCGAAC+CGG | + | chr8_4:53022747-53022766 | None:intergenic | 50.0% | |
| GTTCGAAAGAGACGCTGGAA+TGG | - | chr8_4:53022747-53022766 | Msa1333010:CDS | 50.0% | |
| ATAAGGAGGCAGCCGCCTAT+AGG | - | chr8_4:53015681-53015700 | Msa1333010:three_prime_UTR | 55.0% | |
| !! | TCATGGTGTTGTTGCGGAGG+AGG | + | chr8_4:53015883-53015902 | None:intergenic | 55.0% |
| !! | CACCATGACAATGATGGCGG+CGG | - | chr8_4:53015895-53015914 | Msa1333010:three_prime_UTR | 55.0% |
| GACGATACCGAGAGCGAAGA+TGG | - | chr8_4:53015940-53015959 | Msa1333010:exon | 55.0% | |
| GCCAACCATCCGTAGATGTG+AGG | - | chr8_4:53017099-53017118 | Msa1333010:intron | 55.0% | |
| GCCTCACATCTACGGATGGT+TGG | + | chr8_4:53017103-53017122 | None:intergenic | 55.0% | |
| !! | AGGAGCAGAAGTGTTGTCGG+AGG | + | chr8_4:53017259-53017278 | None:intergenic | 55.0% |
| ! | ATCCGAAGTGCCTTCTGGTC+AGG | - | chr8_4:53017404-53017423 | Msa1333010:intron | 55.0% |
| ! | CAGTGATCTGGAGCTGAGGA+AGG | + | chr8_4:53017626-53017645 | None:intergenic | 55.0% |
| ! | GCTTCAGTGATCTGGAGCTG+AGG | + | chr8_4:53017630-53017649 | None:intergenic | 55.0% |
| CTCCTTCCAAGGACGTACCT+GGG | - | chr8_4:53017798-53017817 | Msa1333010:intron | 55.0% | |
| TCCTTCCAAGGACGTACCTG+GGG | - | chr8_4:53017799-53017818 | Msa1333010:intron | 55.0% | |
| GTATTCCCCAGGTACGTCCT+TGG | + | chr8_4:53017807-53017826 | None:intergenic | 55.0% | |
| AGGACGTACCTGGGGAATAC+CGG | - | chr8_4:53017807-53017826 | Msa1333010:intron | 55.0% | |
| AATACCGGGTTCGATCCCCA+GGG | - | chr8_4:53017822-53017841 | Msa1333010:intron | 55.0% | |
| !! | CCAATGGTGGGCGACTAATC+CGG | + | chr8_4:53017888-53017907 | None:intergenic | 55.0% |
| ! | GATTAGTCGCCCACCATTGG+TGG | - | chr8_4:53017888-53017907 | Msa1333010:intron | 55.0% |
| GGTTTCCAACCCACCAATGG+TGG | + | chr8_4:53017901-53017920 | None:intergenic | 55.0% | |
| ! | ACCGGTTTCCAACCCACCAA+TGG | + | chr8_4:53017904-53017923 | None:intergenic | 55.0% |
| TGACAGGGCCTCCATAGATG+TGG | - | chr8_4:53019574-53019593 | Msa1333010:CDS | 55.0% | |
| ! | CGGGGTATCCACATCTATGG+AGG | + | chr8_4:53019585-53019604 | None:intergenic | 55.0% |
| ! | CCACGGGGTATCCACATCTA+TGG | + | chr8_4:53019588-53019607 | None:intergenic | 55.0% |
| CCATAGATGTGGATACCCCG+TGG | - | chr8_4:53019585-53019604 | Msa1333010:CDS | 55.0% | |
| ATGTGGATACCCCGTGGTCT+GGG | - | chr8_4:53019591-53019610 | Msa1333010:CDS | 55.0% | |
| !! | CATTGCCTCTGTTGGTGGCA+TGG | + | chr8_4:53019754-53019773 | None:intergenic | 55.0% |
| CCAGTCATTGCCTCTGTTGG+TGG | + | chr8_4:53019759-53019778 | None:intergenic | 55.0% | |
| CCACCAACAGAGGCAATGAC+TGG | - | chr8_4:53019756-53019775 | Msa1333010:CDS | 55.0% | |
| CTGCCAGTCATTGCCTCTGT+TGG | + | chr8_4:53019762-53019781 | None:intergenic | 55.0% | |
| AGAGGCAATGACTGGCAGTG+TGG | - | chr8_4:53019764-53019783 | Msa1333010:CDS | 55.0% | |
| ATATAGCTGCATGCGGGCAG+TGG | + | chr8_4:53020268-53020287 | None:intergenic | 55.0% | |
| GAAGCAGTGAAGCAGCCCAT+CGG | - | chr8_4:53022642-53022661 | Msa1333010:CDS | 55.0% | |
| TGTTGTTGCGGAGGAGGAGG+TGG | + | chr8_4:53015877-53015896 | None:intergenic | 60.0% | |
| !! | TGGTGTTGTTGCGGAGGAGG+AGG | + | chr8_4:53015880-53015899 | None:intergenic | 60.0% |
| CACCGCCGCCATCATTGTCA+TGG | + | chr8_4:53015900-53015919 | None:intergenic | 60.0% | |
| !! | CATGACAATGATGGCGGCGG+TGG | - | chr8_4:53015898-53015917 | Msa1333010:three_prime_UTR | 60.0% |
| GAGAAGCCGTGGAGGATTCC+CGG | - | chr8_4:53016674-53016693 | Msa1333010:intron | 60.0% | |
| GGACGCCTCACATCTACGGA+TGG | + | chr8_4:53017107-53017126 | None:intergenic | 60.0% | |
| GCGTGGACGCCTCACATCTA+CGG | + | chr8_4:53017111-53017130 | None:intergenic | 60.0% | |
| CCACTGGAGCCCAAGCAACT+TGG | + | chr8_4:53017771-53017790 | None:intergenic | 60.0% | |
| CCAAGTTGCTTGGGCTCCAG+TGG | - | chr8_4:53017768-53017787 | Msa1333010:intron | 60.0% | |
| TTGCTTGGGCTCCAGTGGCA+AGG | - | chr8_4:53017773-53017792 | Msa1333010:intron | 60.0% | |
| TGGAAGGAGCTCCTTGCCAC+TGG | + | chr8_4:53017787-53017806 | None:intergenic | 60.0% | |
| GTGGCAAGGAGCTCCTTCCA+AGG | - | chr8_4:53017787-53017806 | Msa1333010:intron | 60.0% | |
| GCTCCTTCCAAGGACGTACC+TGG | - | chr8_4:53017797-53017816 | Msa1333010:intron | 60.0% | |
| TCCCCAGGTACGTCCTTGGA+AGG | + | chr8_4:53017803-53017822 | None:intergenic | 60.0% | |
| GGACGTACCTGGGGAATACC+GGG | - | chr8_4:53017808-53017827 | Msa1333010:intron | 60.0% | |
| GATCGAACCCGGTATTCCCC+AGG | + | chr8_4:53017818-53017837 | None:intergenic | 60.0% | |
| GAATACCGGGTTCGATCCCC+AGG | - | chr8_4:53017821-53017840 | Msa1333010:intron | 60.0% | |
| ATACCGGGTTCGATCCCCAG+GGG | - | chr8_4:53017823-53017842 | Msa1333010:intron | 60.0% | |
| ! | GTGCGTAGAGGCATGCACAC+TGG | + | chr8_4:53017862-53017881 | None:intergenic | 60.0% |
| ! | CTAATCCGGCTCGTGCGTAG+AGG | + | chr8_4:53017874-53017893 | None:intergenic | 60.0% |
| !! | CCGGATTAGTCGCCCACCAT+TGG | - | chr8_4:53017885-53017904 | Msa1333010:intron | 60.0% |
| GATGTGGATACCCCGTGGTC+TGG | - | chr8_4:53019590-53019609 | Msa1333010:CDS | 60.0% | |
| TACCCCGTGGTCTGGGAGAA+CGG | - | chr8_4:53019598-53019617 | Msa1333010:CDS | 60.0% | |
| TCCTCCGTTCTCCCAGACCA+CGG | + | chr8_4:53019605-53019624 | None:intergenic | 60.0% | |
| TGTTGCGGAGGAGGAGGTGG+AGG | + | chr8_4:53015874-53015893 | None:intergenic | 65.0% | |
| ! | TCGGCACCGGGAATCCTCCA+CGG | + | chr8_4:53016683-53016702 | None:intergenic | 65.0% |
| TACCGGGTTCGATCCCCAGG+GGG | - | chr8_4:53017824-53017843 | Msa1333010:intron | 65.0% | |
| TTCCCCCTGGGGATCGAACC+CGG | + | chr8_4:53017829-53017848 | None:intergenic | 65.0% | |
| TCCCCAGGGGGAACAACGCT+TGG | - | chr8_4:53017836-53017855 | Msa1333010:intron | 65.0% | |
| ! | GCCAAGCGTTGTTCCCCCTG+GGG | + | chr8_4:53017840-53017859 | None:intergenic | 65.0% |
| ! | GGCCAAGCGTTGTTCCCCCT+GGG | + | chr8_4:53017841-53017860 | None:intergenic | 65.0% |
| ! | TGGCCAAGCGTTGTTCCCCC+TGG | + | chr8_4:53017842-53017861 | None:intergenic | 65.0% |
| GCATGCCTCTACGCACGAGC+CGG | - | chr8_4:53017866-53017885 | Msa1333010:intron | 65.0% | |
| ! | GTCGCCCACCATTGGTGGGT+TGG | - | chr8_4:53017893-53017912 | Msa1333010:intron | 65.0% |
| CTCCGTTCTCCCAGACCACG+GGG | + | chr8_4:53019603-53019622 | None:intergenic | 65.0% | |
| CCTCCGTTCTCCCAGACCAC+GGG | + | chr8_4:53019604-53019623 | None:intergenic | 65.0% | |
| !! | GGCCGGTTCGAAAGAGACGC+TGG | - | chr8_4:53022742-53022761 | Msa1333010:CDS | 65.0% |
| CGGAGGAGGAGGTGGAGGAG+TGG | + | chr8_4:53015869-53015888 | None:intergenic | 70.0% | |
| CCCGTGGTCTGGGAGAACGG+AGG | - | chr8_4:53019601-53019620 | Msa1333010:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 53015679 | 53023039 | 53015679 | ID=Msa1333010;Name=Msa1333010 |
| chr8_4 | mRNA | 53015679 | 53023039 | 53015679 | ID=Msa1333010-mRNA-1;Parent=Msa1333010;Name=Msa1333010-mRNA-1;_AED=0.07;_eAED=0.07;_QI=114|1|0.87|1|1|1|8|266|1103 |
| chr8_4 | exon | 53015679 | 53016511 | 53015679 | ID=Msa1333010-mRNA-1:exon:16094;Parent=Msa1333010-mRNA-1 |
| chr8_4 | exon | 53018556 | 53020275 | 53018556 | ID=Msa1333010-mRNA-1:exon:16093;Parent=Msa1333010-mRNA-1 |
| chr8_4 | exon | 53021288 | 53021478 | 53021288 | ID=Msa1333010-mRNA-1:exon:16092;Parent=Msa1333010-mRNA-1 |
| chr8_4 | exon | 53021561 | 53021662 | 53021561 | ID=Msa1333010-mRNA-1:exon:16091;Parent=Msa1333010-mRNA-1 |
| chr8_4 | exon | 53021798 | 53021869 | 53021798 | ID=Msa1333010-mRNA-1:exon:16090;Parent=Msa1333010-mRNA-1 |
| chr8_4 | exon | 53021952 | 53022078 | 53021952 | ID=Msa1333010-mRNA-1:exon:16089;Parent=Msa1333010-mRNA-1 |
| chr8_4 | exon | 53022195 | 53022358 | 53022195 | ID=Msa1333010-mRNA-1:exon:16088;Parent=Msa1333010-mRNA-1 |
| chr8_4 | exon | 53022557 | 53023039 | 53022557 | ID=Msa1333010-mRNA-1:exon:16087;Parent=Msa1333010-mRNA-1 |
| chr8_4 | five_prime_UTR | 53022926 | 53023039 | 53022926 | ID=Msa1333010-mRNA-1:five_prime_utr;Parent=Msa1333010-mRNA-1 |
| chr8_4 | CDS | 53022557 | 53022925 | 53022557 | ID=Msa1333010-mRNA-1:cds;Parent=Msa1333010-mRNA-1 |
| chr8_4 | CDS | 53022195 | 53022358 | 53022195 | ID=Msa1333010-mRNA-1:cds;Parent=Msa1333010-mRNA-1 |
| chr8_4 | CDS | 53021952 | 53022078 | 53021952 | ID=Msa1333010-mRNA-1:cds;Parent=Msa1333010-mRNA-1 |
| chr8_4 | CDS | 53021798 | 53021869 | 53021798 | ID=Msa1333010-mRNA-1:cds;Parent=Msa1333010-mRNA-1 |
| chr8_4 | CDS | 53021561 | 53021662 | 53021561 | ID=Msa1333010-mRNA-1:cds;Parent=Msa1333010-mRNA-1 |
| chr8_4 | CDS | 53021288 | 53021478 | 53021288 | ID=Msa1333010-mRNA-1:cds;Parent=Msa1333010-mRNA-1 |
| chr8_4 | CDS | 53018556 | 53020275 | 53018556 | ID=Msa1333010-mRNA-1:cds;Parent=Msa1333010-mRNA-1 |
| chr8_4 | CDS | 53015945 | 53016511 | 53015945 | ID=Msa1333010-mRNA-1:cds;Parent=Msa1333010-mRNA-1 |
| chr8_4 | three_prime_UTR | 53015679 | 53015944 | 53015679 | ID=Msa1333010-mRNA-1:three_prime_utr;Parent=Msa1333010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
