AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0746430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0746430 MtrunA17_Chr1g0196481 85.227 176 3 1 51 226 1 153 6.82e-105 299
Msa0746430 MtrunA17_Chr6g0470951 85.093 161 22 1 66 226 1 159 1.37e-98 283
Msa0746430 MtrunA17_Chr6g0460561 84.138 145 23 0 82 226 1 145 1.34e-84 248
Msa0746430 MtrunA17_Chr6g0472721 82.759 145 25 0 82 226 1 145 1.60e-84 247
Msa0746430 MtrunA17_Chr6g0472711 82.759 145 25 0 82 226 1 145 1.60e-84 247
Msa0746430 MtrunA17_Chr6g0472741 82.759 145 25 0 82 226 1 145 1.60e-84 247
Msa0746430 MtrunA17_Chr6g0472631 82.759 145 25 0 82 226 1 145 1.60e-84 247
Msa0746430 MtrunA17_Chr6g0472671 82.759 145 25 0 82 226 1 145 1.60e-84 247
Msa0746430 MtrunA17_Chr6g0472701 82.759 145 25 0 82 226 1 145 1.60e-84 247
Msa0746430 MtrunA17_Chr6g0470941 83.448 145 24 0 82 226 1 145 3.22e-84 246
Msa0746430 MtrunA17_Chr6g0472691 82.069 145 26 0 82 226 1 145 6.57e-84 246
Msa0746430 MtrunA17_Chr6g0472731 81.379 145 27 0 82 226 1 145 1.04e-82 243
Msa0746430 MtrunA17_Chr6g0472681 81.379 145 27 0 82 226 1 145 1.07e-82 243
Msa0746430 MtrunA17_Chr6g0460591 82.645 121 21 0 91 211 8 128 1.40e-70 211
Msa0746430 MtrunA17_Chr6g0472651 84.259 108 17 0 82 189 1 108 6.36e-62 189
Msa0746430 MtrunA17_Chr6g0472661 84.259 108 17 0 82 189 1 108 6.36e-62 189
Msa0746430 MtrunA17_Chr6g0460571 85.437 103 15 0 117 219 4 106 9.67e-61 186
Msa0746430 MtrunA17_Chr6g0472621 81.731 104 19 0 82 185 1 104 4.98e-56 174
Msa0746430 MtrunA17_Chr6g0460581 78.723 94 20 0 118 211 3 96 9.42e-51 160
Msa0746430 MtrunA17_Chr6g0472641 80.263 76 15 0 82 157 1 76 1.66e-36 123
Msa0746430 MtrunA17_Chr6g0488751 44.366 142 71 3 70 203 95 236 1.65e-34 125
Msa0746430 MtrunA17_Chr3g0091711 37.079 178 101 4 34 203 28 202 2.45e-32 117
Msa0746430 MtrunA17_Chr3g0091691 37.572 173 97 4 39 203 33 202 2.67e-32 117
Msa0746430 MtrunA17_Chr3g0092081 41.135 141 75 3 71 203 106 246 3.63e-32 119
Msa0746430 MtrunA17_Chr3g0092101 39.716 141 77 3 71 203 103 243 1.87e-29 111
Msa0746430 MtrunA17_Chr3g0091651 35.955 89 53 2 120 204 3 91 1.47e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0746430 AT3G63030.1 64.444 135 48 0 71 205 25 159 4.44e-65 200
Msa0746430 AT4G22745.1 56.835 139 60 0 70 208 51 189 4.28e-58 182
Msa0746430 AT5G35330.3 40.426 141 76 3 70 202 55 195 6.58e-31 115
Msa0746430 AT5G35330.1 40.426 141 76 3 70 202 55 195 6.58e-31 115
Msa0746430 AT5G35330.4 40.426 141 76 3 70 202 55 195 6.58e-31 115
Msa0746430 AT5G35330.2 40.426 141 76 3 70 202 55 195 6.58e-31 115
Msa0746430 AT4G00416.1 36.641 131 73 4 71 196 9 134 2.67e-24 95.1
Msa0746430 AT5G35338.2 32.836 134 77 5 76 202 2 129 7.38e-18 77.8

Find 75 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGAATAGAAAATATATTT+TGG 0.215768 5_1:-68605772 None:intergenic
TTGAAACCTTGTGGAGTCTT+TGG 0.225609 5_1:-68605303 None:intergenic
TTCTGTTGCTCAATAAATTC+TGG 0.227479 5_1:-68605507 None:intergenic
TGGTGTCTTGCATAATCTTT+GGG 0.244821 5_1:-68605482 None:intergenic
ATGGTGTCTTGCATAATCTT+TGG 0.279956 5_1:-68605483 None:intergenic
TTATTTCTAGATATTGTGTT+AGG 0.290857 5_1:+68605645 Msa0746430:three_prime_UTR
TGTGGAGTCTTTGGAATGTT+AGG 0.313454 5_1:-68605294 None:intergenic
GAGCCTGCTAATATATGTTT+AGG 0.323867 5_1:-68605726 None:intergenic
CACCCCGTCCCAAACTATAT+TGG 0.339399 5_1:-68603769 None:intergenic
ATGCACAACCCGCCCTCAAT+GGG 0.365477 5_1:-68603733 None:intergenic
AATGCAAACTTTGCATGAAA+TGG 0.372986 5_1:+68605124 Msa0746430:CDS
GCTAGAAGAAGATGGAGTTT+TGG 0.380480 5_1:-68604137 None:intergenic
GTTGTTGTTGATGCTAATTA+TGG 0.395009 5_1:+68605603 Msa0746430:three_prime_UTR
ACGGGGTGGGTGCATGGAAG+CGG 0.395232 5_1:+68603784 Msa0746430:CDS
TTGTTTCAATACCACTGAAT+TGG 0.402047 5_1:-68605673 None:intergenic
TAGAAAGGATTACTCTAAGT+TGG 0.402694 5_1:+68605341 Msa0746430:CDS
ATATGCTGCTATCTCATTGC+GGG 0.412618 5_1:-68605403 None:intergenic
CGGAAGATCCGCCCCATTGA+GGG 0.417585 5_1:+68603721 Msa0746430:CDS
TGGGTGCATGGAAGCGGAAG+CGG 0.419452 5_1:+68603790 Msa0746430:CDS
TCTGTTGCTCAATAAATTCT+GGG 0.422405 5_1:-68605506 None:intergenic
ACAAGGTTTCAAGAGAATCT+TGG 0.424100 5_1:+68605314 Msa0746430:CDS
AATGCACAACCCGCCCTCAA+TGG 0.433117 5_1:-68603734 None:intergenic
TGCTACAATCAAAAGGCTCT+CGG 0.434619 5_1:-68605197 None:intergenic
ATATTGAATATGATTCTTCT+CGG 0.438557 5_1:+68605253 Msa0746430:CDS
GAGAATCTTGGTGCTTAGAA+AGG 0.448776 5_1:+68605326 Msa0746430:CDS
TTGTTTGCTGAATCAATGTC+GGG 0.454590 5_1:+68604112 Msa0746430:CDS
CATGGAAGCGGAAGCGGAAG+CGG 0.473059 5_1:+68603796 Msa0746430:CDS
TTTGGGACGGGGTGGGTGCA+TGG 0.473918 5_1:+68603778 Msa0746430:CDS
AATATGATTCTTCTCGGACA+TGG 0.476290 5_1:+68605259 Msa0746430:CDS
GCGGAAGATCCGCCCCATTG+AGG 0.480775 5_1:+68603720 Msa0746430:CDS
TGATACACAAGAGGAGTTTG+AGG 0.485320 5_1:+68605155 Msa0746430:CDS
CAATATAGTTTGGGACGGGG+TGG 0.486697 5_1:+68603770 Msa0746430:CDS
TCTCCAATATAGTTTGGGAC+GGG 0.491119 5_1:+68603766 Msa0746430:CDS
AATATAGTTTGGGACGGGGT+GGG 0.496084 5_1:+68603771 Msa0746430:CDS
TATTTCTAGATATTGTGTTA+GGG 0.498956 5_1:+68605646 Msa0746430:three_prime_UTR
TTTCACATGTGGGGTGGTGG+CGG 0.506512 5_1:+68603701 None:intergenic
ATCTCCAATATAGTTTGGGA+CGG 0.510798 5_1:+68603765 Msa0746430:CDS
TAACCTAAACATATATTAGC+AGG 0.512370 5_1:+68605723 Msa0746430:three_prime_UTR
ATGGAAGCGGAAGCGGAAGC+GGG 0.514650 5_1:+68603797 Msa0746430:CDS
TCTTACTACATCACACCTAC+AGG 0.516283 5_1:+68605366 Msa0746430:CDS
AGCGGAAGCGGAAGCGGGAA+CGG 0.516407 5_1:+68603802 Msa0746430:CDS
CATATATATCAACTGAGCCC+TGG 0.521418 5_1:-68605095 None:intergenic
ATATGATTCTTCTCGGACAT+GGG 0.527218 5_1:+68605260 Msa0746430:CDS
TTGTTGATGCTAATTATGGT+TGG 0.527749 5_1:+68605607 Msa0746430:three_prime_UTR
GACTTGAGGCAAATTGATTG+AGG 0.537892 5_1:-68605798 None:intergenic
ACTGAGCCCTGGGTCATCGC+CGG 0.538613 5_1:-68605084 None:intergenic
TTTGTTTGCTGAATCAATGT+CGG 0.540179 5_1:+68604111 Msa0746430:CDS
AGAATTTATTGAGCAACAGA+AGG 0.543104 5_1:+68605509 Msa0746430:CDS
ATATATATCAACTGAGCCCT+GGG 0.551958 5_1:-68605094 None:intergenic
GAATCATATTCAATATCAGC+AGG 0.552211 5_1:-68605246 None:intergenic
GCAGATACACCACTGGGTTG+AGG 0.552234 5_1:-68605438 None:intergenic
AAGATCCGCCCCATTGAGGG+CGG 0.556329 5_1:+68603724 Msa0746430:CDS
CTCCAATATAGTTTGGGACG+GGG 0.556947 5_1:+68603767 Msa0746430:CDS
AACTCCATCTTCTTCTAGCA+AGG 0.558032 5_1:+68604141 Msa0746430:CDS
AAGATTCTCTTGAAACCTTG+TGG 0.558153 5_1:-68605312 None:intergenic
AGTACCTTGCTAGAAGAAGA+TGG 0.558912 5_1:-68604145 None:intergenic
ACAGAGACCGGCGATGACCC+AGG 0.559040 5_1:+68605077 Msa0746430:intron
AATATATGTTTAGGTTACAA+TGG 0.565398 5_1:-68605717 None:intergenic
AGATCCGCCCCATTGAGGGC+GGG 0.578215 5_1:+68603725 Msa0746430:CDS
CAGAGACCGGCGATGACCCA+GGG 0.581876 5_1:+68605078 Msa0746430:intron
ATCCGCAGCAGATACACCAC+TGG 0.582537 5_1:-68605445 None:intergenic
ACCCAGTGGTGTATCTGCTG+CGG 0.611469 5_1:+68605443 Msa0746430:CDS
GATATGCTGCTATCTCATTG+CGG 0.625471 5_1:-68605404 None:intergenic
ATCATCACAAGGTTGCTGCA+TGG 0.631048 5_1:+68605581 Msa0746430:three_prime_UTR
TTGCTCAATAAATTCTGGGA+TGG 0.634957 5_1:-68605502 None:intergenic
AACATTCCAAAGACTCCACA+AGG 0.636979 5_1:+68605297 Msa0746430:CDS
GAGAGTGATTGATACACAAG+AGG 0.640381 5_1:+68605146 Msa0746430:CDS
ACAACCCGCCCTCAATGGGG+CGG 0.643881 5_1:-68603729 None:intergenic
GTTAGGGAACACCAATTCAG+TGG 0.646468 5_1:+68605662 Msa0746430:three_prime_UTR
GTTTGAGAAATATCATCACA+AGG 0.662203 5_1:+68605570 Msa0746430:exon
TGCACAACCCGCCCTCAATG+GGG 0.667806 5_1:-68603732 None:intergenic
GGTGTCTTGCATAATCTTTG+GGG 0.668330 5_1:-68605481 None:intergenic
GCTCTCGGATGATCTTATGA+CGG 0.668353 5_1:-68605182 None:intergenic
TCCGCAGCAGATACACCACT+GGG 0.695152 5_1:-68605444 None:intergenic
AAAGATCATCCTCAACCCAG+TGG 0.719856 5_1:+68605429 Msa0746430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACAAATTTAATTTTAGTT+TGG + chr5_1:68605690-68605709 Msa0746430:three_prime_UTR 10.0%
!!! TAGAATAGAAAATATATTTT+GGG - chr5_1:68605774-68605793 None:intergenic 10.0%
!!! ATAGAATAGAAAATATATTT+TGG - chr5_1:68605775-68605794 None:intergenic 10.0%
!!! AAACAAATTTAATTTTAGTT+TGG + chr5_1:68605690-68605709 Msa0746430:three_prime_UTR 10.0%
!!! TAGAATAGAAAATATATTTT+GGG - chr5_1:68605774-68605793 None:intergenic 10.0%
!!! ATAGAATAGAAAATATATTT+TGG - chr5_1:68605775-68605794 None:intergenic 10.0%
!!! TTTTTATCTCCAATATAGTT+TGG + chr5_1:68603760-68603779 Msa0746430:CDS 20.0%
!!! TTTTATCTCCAATATAGTTT+GGG + chr5_1:68603761-68603780 Msa0746430:CDS 20.0%
!!! AGGCCATTTTTTTATATTTT+CGG - chr5_1:68603896-68603915 None:intergenic 20.0%
!! GAAAAATAGTTGAAAACTAA+GGG - chr5_1:68604226-68604245 None:intergenic 20.0%
!! AGAAAAATAGTTGAAAACTA+AGG - chr5_1:68604227-68604246 None:intergenic 20.0%
!!! TTACTTGTTAATTGAATTGA+AGG + chr5_1:68604306-68604325 Msa0746430:intron 20.0%
!!! TACTTGTTAATTGAATTGAA+GGG + chr5_1:68604307-68604326 Msa0746430:intron 20.0%
!!! TGTTAATTTTCTGTTTTGAA+TGG + chr5_1:68604450-68604469 Msa0746430:intron 20.0%
!!! GTTAATTTTCTGTTTTGAAT+GGG + chr5_1:68604451-68604470 Msa0746430:intron 20.0%
!!! TTAATTTTCTGTTTTGAATG+GGG + chr5_1:68604452-68604471 Msa0746430:intron 20.0%
!! TAAATTGTGCACTTATAATT+TGG + chr5_1:68604852-68604871 Msa0746430:intron 20.0%
!! CTCAATATAAAAACCTAATA+TGG - chr5_1:68604916-68604935 None:intergenic 20.0%
!!! ATGGATTATTAAGTCTTTAT+TGG + chr5_1:68605044-68605063 Msa0746430:intron 20.0%
!! TGGATTATTAAGTCTTTATT+GGG + chr5_1:68605045-68605064 Msa0746430:intron 20.0%
!! ATATTGAATATGATTCTTCT+CGG + chr5_1:68605253-68605272 Msa0746430:CDS 20.0%
!!! TTATTTCTAGATATTGTGTT+AGG + chr5_1:68605645-68605664 Msa0746430:three_prime_UTR 20.0%
!!! TATTTCTAGATATTGTGTTA+GGG + chr5_1:68605646-68605665 Msa0746430:three_prime_UTR 20.0%
!!! CAAATTTAATTTTAGTTTGG+TGG + chr5_1:68605693-68605712 Msa0746430:three_prime_UTR 20.0%
!!! AATATATGTTTAGGTTACAA+TGG - chr5_1:68605720-68605739 None:intergenic 20.0%
!!! TTTTTATCTCCAATATAGTT+TGG + chr5_1:68603760-68603779 Msa0746430:CDS 20.0%
!!! TTTTATCTCCAATATAGTTT+GGG + chr5_1:68603761-68603780 Msa0746430:CDS 20.0%
!!! AGGCCATTTTTTTATATTTT+CGG - chr5_1:68603896-68603915 None:intergenic 20.0%
!! GAAAAATAGTTGAAAACTAA+GGG - chr5_1:68604226-68604245 None:intergenic 20.0%
!! AGAAAAATAGTTGAAAACTA+AGG - chr5_1:68604227-68604246 None:intergenic 20.0%
!!! TTACTTGTTAATTGAATTGA+AGG + chr5_1:68604306-68604325 Msa0746430:intron 20.0%
!!! TACTTGTTAATTGAATTGAA+GGG + chr5_1:68604307-68604326 Msa0746430:intron 20.0%
!!! TGTTAATTTTCTGTTTTGAA+TGG + chr5_1:68604450-68604469 Msa0746430:intron 20.0%
!!! GTTAATTTTCTGTTTTGAAT+GGG + chr5_1:68604451-68604470 Msa0746430:intron 20.0%
!!! TTAATTTTCTGTTTTGAATG+GGG + chr5_1:68604452-68604471 Msa0746430:intron 20.0%
!! TAAATTGTGCACTTATAATT+TGG + chr5_1:68604852-68604871 Msa0746430:intron 20.0%
!! CTCAATATAAAAACCTAATA+TGG - chr5_1:68604916-68604935 None:intergenic 20.0%
!!! ATGGATTATTAAGTCTTTAT+TGG + chr5_1:68605044-68605063 Msa0746430:intron 20.0%
!! TGGATTATTAAGTCTTTATT+GGG + chr5_1:68605045-68605064 Msa0746430:intron 20.0%
!! ATATTGAATATGATTCTTCT+CGG + chr5_1:68605253-68605272 Msa0746430:CDS 20.0%
!!! TTATTTCTAGATATTGTGTT+AGG + chr5_1:68605645-68605664 Msa0746430:three_prime_UTR 20.0%
!!! TATTTCTAGATATTGTGTTA+GGG + chr5_1:68605646-68605665 Msa0746430:three_prime_UTR 20.0%
!!! CAAATTTAATTTTAGTTTGG+TGG + chr5_1:68605693-68605712 Msa0746430:three_prime_UTR 20.0%
!!! AATATATGTTTAGGTTACAA+TGG - chr5_1:68605720-68605739 None:intergenic 20.0%
! AGAGAAATATAACACTCTTT+AGG - chr5_1:68603916-68603935 None:intergenic 25.0%
!! TTGTTTATTTCTTTCTCTCT+TGG - chr5_1:68604027-68604046 None:intergenic 25.0%
!!! ACTCGATTCCTTTTTTTTTT+AGG + chr5_1:68604190-68604209 Msa0746430:intron 25.0%
!!! CTCGATTCCTTTTTTTTTTA+GGG + chr5_1:68604191-68604210 Msa0746430:intron 25.0%
! GACAAAACCCTAAAAAAAAA+AGG - chr5_1:68604201-68604220 None:intergenic 25.0%
!! TCTATTCTTGTTAACTCTTT+TGG + chr5_1:68604250-68604269 Msa0746430:intron 25.0%
!! CTATTCTTGTTAACTCTTTT+GGG + chr5_1:68604251-68604270 Msa0746430:intron 25.0%
!!! TGATGTTCTTTTTTCGTTTT+AGG + chr5_1:68604275-68604294 Msa0746430:intron 25.0%
!!! GATGTTCTTTTTTCGTTTTA+GGG + chr5_1:68604276-68604295 Msa0746430:intron 25.0%
! AAATCGTAGGAGTAAAAAAA+AGG + chr5_1:68604743-68604762 Msa0746430:intron 25.0%
! AATCGTAGGAGTAAAAAAAA+GGG + chr5_1:68604744-68604763 Msa0746430:intron 25.0%
! GAGTAAAAAAAAGGGTTTAA+GGG + chr5_1:68604752-68604771 Msa0746430:intron 25.0%
! TATAAGTGCACAATTTAACA+TGG - chr5_1:68604849-68604868 None:intergenic 25.0%
!!! TTGGTTTTTTGTCAATAGTA+TGG + chr5_1:68605025-68605044 Msa0746430:intron 25.0%
! TAACCTAAACATATATTAGC+AGG + chr5_1:68605723-68605742 Msa0746430:three_prime_UTR 25.0%
! AGAGAAATATAACACTCTTT+AGG - chr5_1:68603916-68603935 None:intergenic 25.0%
!! TTGTTTATTTCTTTCTCTCT+TGG - chr5_1:68604027-68604046 None:intergenic 25.0%
!!! ACTCGATTCCTTTTTTTTTT+AGG + chr5_1:68604190-68604209 Msa0746430:intron 25.0%
!!! CTCGATTCCTTTTTTTTTTA+GGG + chr5_1:68604191-68604210 Msa0746430:intron 25.0%
! GACAAAACCCTAAAAAAAAA+AGG - chr5_1:68604201-68604220 None:intergenic 25.0%
!! TCTATTCTTGTTAACTCTTT+TGG + chr5_1:68604250-68604269 Msa0746430:intron 25.0%
!! CTATTCTTGTTAACTCTTTT+GGG + chr5_1:68604251-68604270 Msa0746430:intron 25.0%
!!! TGATGTTCTTTTTTCGTTTT+AGG + chr5_1:68604275-68604294 Msa0746430:intron 25.0%
!!! GATGTTCTTTTTTCGTTTTA+GGG + chr5_1:68604276-68604295 Msa0746430:intron 25.0%
! AAATCGTAGGAGTAAAAAAA+AGG + chr5_1:68604743-68604762 Msa0746430:intron 25.0%
! AATCGTAGGAGTAAAAAAAA+GGG + chr5_1:68604744-68604763 Msa0746430:intron 25.0%
! GAGTAAAAAAAAGGGTTTAA+GGG + chr5_1:68604752-68604771 Msa0746430:intron 25.0%
! TATAAGTGCACAATTTAACA+TGG - chr5_1:68604849-68604868 None:intergenic 25.0%
!!! TTGGTTTTTTGTCAATAGTA+TGG + chr5_1:68605025-68605044 Msa0746430:intron 25.0%
! TAACCTAAACATATATTAGC+AGG + chr5_1:68605723-68605742 Msa0746430:three_prime_UTR 25.0%
CCTAGGTAATCTATACTATA+GGG + chr5_1:68603863-68603882 Msa0746430:intron 30.0%
CTAGGTAATCTATACTATAG+GGG + chr5_1:68603864-68603883 Msa0746430:intron 30.0%
TAATCTATACTATAGGGGTA+TGG + chr5_1:68603869-68603888 Msa0746430:intron 30.0%
! AATCTATACTATAGGGGTAT+GGG + chr5_1:68603870-68603889 Msa0746430:intron 30.0%
GGGCCGAAAATATAAAAAAA+TGG + chr5_1:68603890-68603909 Msa0746430:intron 30.0%
! TTATTTCTTTCTCTCTTGGT+AGG - chr5_1:68604023-68604042 None:intergenic 30.0%
AAATAAACAACTGTTCCGTT+CGG + chr5_1:68604037-68604056 Msa0746430:intron 30.0%
! TTTGTTTGCTGAATCAATGT+CGG + chr5_1:68604111-68604130 Msa0746430:CDS 30.0%
AAAAAAATCTTACGCACCTA+GGG - chr5_1:68604376-68604395 None:intergenic 30.0%
AAAAAAAATCTTACGCACCT+AGG - chr5_1:68604377-68604396 None:intergenic 30.0%
ATTGTTAAACCAAGATAGAG+TGG + chr5_1:68604483-68604502 Msa0746430:intron 30.0%
! TGTTATGTTGCTGTTAAGTA+TGG + chr5_1:68604544-68604563 Msa0746430:intron 30.0%
! GTTATGTTGCTGTTAAGTAT+GGG + chr5_1:68604545-68604564 Msa0746430:intron 30.0%
AATATCAGATCTGCAACAAA+AGG + chr5_1:68604573-68604592 Msa0746430:intron 30.0%
! TTGCTAAATTGTTTCTCTTC+CGG + chr5_1:68604679-68604698 Msa0746430:intron 30.0%
TGAAATCCAGACAAATCAAA+GGG - chr5_1:68604723-68604742 None:intergenic 30.0%
TTGAAATCCAGACAAATCAA+AGG - chr5_1:68604724-68604743 None:intergenic 30.0%
GGAGTAAAAAAAAGGGTTTA+AGG + chr5_1:68604751-68604770 Msa0746430:intron 30.0%
ATTGTGCACTTATAATTTGG+TGG + chr5_1:68604855-68604874 Msa0746430:intron 30.0%
ATAGACTGTGATACCATATT+AGG + chr5_1:68604900-68604919 Msa0746430:intron 30.0%
!!! GCTTATCACTTTTTTAACAC+AGG + chr5_1:68605000-68605019 Msa0746430:intron 30.0%
AATGCAAACTTTGCATGAAA+TGG + chr5_1:68605124-68605143 Msa0746430:CDS 30.0%
GAATCATATTCAATATCAGC+AGG - chr5_1:68605249-68605268 None:intergenic 30.0%
TAGAAAGGATTACTCTAAGT+TGG + chr5_1:68605341-68605360 Msa0746430:CDS 30.0%
TCTGTTGCTCAATAAATTCT+GGG - chr5_1:68605509-68605528 None:intergenic 30.0%
TTCTGTTGCTCAATAAATTC+TGG - chr5_1:68605510-68605529 None:intergenic 30.0%
AGAATTTATTGAGCAACAGA+AGG + chr5_1:68605509-68605528 Msa0746430:CDS 30.0%
GTTTGAGAAATATCATCACA+AGG + chr5_1:68605570-68605589 Msa0746430:exon 30.0%
! GTTGTTGTTGATGCTAATTA+TGG + chr5_1:68605603-68605622 Msa0746430:three_prime_UTR 30.0%
TTGTTGATGCTAATTATGGT+TGG + chr5_1:68605607-68605626 Msa0746430:three_prime_UTR 30.0%
TTGTTTCAATACCACTGAAT+TGG - chr5_1:68605676-68605695 None:intergenic 30.0%
TAGAAGAAAAAGAAGACTTG+AGG - chr5_1:68605815-68605834 None:intergenic 30.0%
CCTAGGTAATCTATACTATA+GGG + chr5_1:68603863-68603882 Msa0746430:intron 30.0%
CTAGGTAATCTATACTATAG+GGG + chr5_1:68603864-68603883 Msa0746430:intron 30.0%
TAATCTATACTATAGGGGTA+TGG + chr5_1:68603869-68603888 Msa0746430:intron 30.0%
! AATCTATACTATAGGGGTAT+GGG + chr5_1:68603870-68603889 Msa0746430:intron 30.0%
GGGCCGAAAATATAAAAAAA+TGG + chr5_1:68603890-68603909 Msa0746430:intron 30.0%
! TTATTTCTTTCTCTCTTGGT+AGG - chr5_1:68604023-68604042 None:intergenic 30.0%
AAATAAACAACTGTTCCGTT+CGG + chr5_1:68604037-68604056 Msa0746430:intron 30.0%
! TTTGTTTGCTGAATCAATGT+CGG + chr5_1:68604111-68604130 Msa0746430:CDS 30.0%
AAAAAAATCTTACGCACCTA+GGG - chr5_1:68604376-68604395 None:intergenic 30.0%
AAAAAAAATCTTACGCACCT+AGG - chr5_1:68604377-68604396 None:intergenic 30.0%
ATTGTTAAACCAAGATAGAG+TGG + chr5_1:68604483-68604502 Msa0746430:intron 30.0%
! TGTTATGTTGCTGTTAAGTA+TGG + chr5_1:68604544-68604563 Msa0746430:intron 30.0%
! GTTATGTTGCTGTTAAGTAT+GGG + chr5_1:68604545-68604564 Msa0746430:intron 30.0%
AATATCAGATCTGCAACAAA+AGG + chr5_1:68604573-68604592 Msa0746430:intron 30.0%
! TTGCTAAATTGTTTCTCTTC+CGG + chr5_1:68604679-68604698 Msa0746430:intron 30.0%
TGAAATCCAGACAAATCAAA+GGG - chr5_1:68604723-68604742 None:intergenic 30.0%
TTGAAATCCAGACAAATCAA+AGG - chr5_1:68604724-68604743 None:intergenic 30.0%
GGAGTAAAAAAAAGGGTTTA+AGG + chr5_1:68604751-68604770 Msa0746430:intron 30.0%
ATTGTGCACTTATAATTTGG+TGG + chr5_1:68604855-68604874 Msa0746430:intron 30.0%
ATAGACTGTGATACCATATT+AGG + chr5_1:68604900-68604919 Msa0746430:intron 30.0%
!!! GCTTATCACTTTTTTAACAC+AGG + chr5_1:68605000-68605019 Msa0746430:intron 30.0%
AATGCAAACTTTGCATGAAA+TGG + chr5_1:68605124-68605143 Msa0746430:CDS 30.0%
GAATCATATTCAATATCAGC+AGG - chr5_1:68605249-68605268 None:intergenic 30.0%
TAGAAAGGATTACTCTAAGT+TGG + chr5_1:68605341-68605360 Msa0746430:CDS 30.0%
TCTGTTGCTCAATAAATTCT+GGG - chr5_1:68605509-68605528 None:intergenic 30.0%
TTCTGTTGCTCAATAAATTC+TGG - chr5_1:68605510-68605529 None:intergenic 30.0%
AGAATTTATTGAGCAACAGA+AGG + chr5_1:68605509-68605528 Msa0746430:CDS 30.0%
GTTTGAGAAATATCATCACA+AGG + chr5_1:68605570-68605589 Msa0746430:exon 30.0%
! GTTGTTGTTGATGCTAATTA+TGG + chr5_1:68605603-68605622 Msa0746430:three_prime_UTR 30.0%
TTGTTGATGCTAATTATGGT+TGG + chr5_1:68605607-68605626 Msa0746430:three_prime_UTR 30.0%
TTGTTTCAATACCACTGAAT+TGG - chr5_1:68605676-68605695 None:intergenic 30.0%
TAGAAGAAAAAGAAGACTTG+AGG - chr5_1:68605815-68605834 None:intergenic 30.0%
ATCTCCAATATAGTTTGGGA+CGG + chr5_1:68603765-68603784 Msa0746430:CDS 35.0%
GCCTAGGTAATCTATACTAT+AGG + chr5_1:68603862-68603881 Msa0746430:intron 35.0%
CCCTATAGTATAGATTACCT+AGG - chr5_1:68603866-68603885 None:intergenic 35.0%
AGATCCGTTAAAAATCTGCT+TGG + chr5_1:68603939-68603958 Msa0746430:intron 35.0%
GATCCGTTAAAAATCTGCTT+GGG + chr5_1:68603940-68603959 Msa0746430:intron 35.0%
! TGTCCCAAGCAGATTTTTAA+CGG - chr5_1:68603946-68603965 None:intergenic 35.0%
! TTGTTTGCTGAATCAATGTC+GGG + chr5_1:68604112-68604131 Msa0746430:CDS 35.0%
!!! GTGCAGATTTGTTTTTATCC+TGG + chr5_1:68604401-68604420 Msa0746430:intron 35.0%
! TCTAGTTTCTCATAAGATCC+AGG - chr5_1:68604422-68604441 None:intergenic 35.0%
CAGAAAATTCCACTCTATCT+TGG - chr5_1:68604495-68604514 None:intergenic 35.0%
TGTCTGGATTTCAAAATCGT+AGG + chr5_1:68604730-68604749 Msa0746430:intron 35.0%
!!! TTAAGGGTTTTTTGCATGTC+TGG + chr5_1:68604768-68604787 Msa0746430:intron 35.0%
! TTTTGCATGTCTGGATTATC+CGG + chr5_1:68604777-68604796 Msa0746430:intron 35.0%
!!! CACTTTTTTAACACAGGACT+TGG + chr5_1:68605006-68605025 Msa0746430:intron 35.0%
ATATATATCAACTGAGCCCT+GGG - chr5_1:68605097-68605116 None:intergenic 35.0%
!! GCCTTTTGATTGTAGCAAAA+AGG + chr5_1:68605203-68605222 Msa0746430:CDS 35.0%
! GCCTTTTTGCTACAATCAAA+AGG - chr5_1:68605207-68605226 None:intergenic 35.0%
AATATGATTCTTCTCGGACA+TGG + chr5_1:68605259-68605278 Msa0746430:CDS 35.0%
ATATGATTCTTCTCGGACAT+GGG + chr5_1:68605260-68605279 Msa0746430:CDS 35.0%
AAGATTCTCTTGAAACCTTG+TGG - chr5_1:68605315-68605334 None:intergenic 35.0%
ACAAGGTTTCAAGAGAATCT+TGG + chr5_1:68605314-68605333 Msa0746430:CDS 35.0%
!!! GTTCTCAGTTTTTTACCTGT+AGG - chr5_1:68605384-68605403 None:intergenic 35.0%
TGGTGTCTTGCATAATCTTT+GGG - chr5_1:68605485-68605504 None:intergenic 35.0%
ATGGTGTCTTGCATAATCTT+TGG - chr5_1:68605486-68605505 None:intergenic 35.0%
! TTGCTCAATAAATTCTGGGA+TGG - chr5_1:68605505-68605524 None:intergenic 35.0%
GAGCCTGCTAATATATGTTT+AGG - chr5_1:68605729-68605748 None:intergenic 35.0%
ATCTCCAATATAGTTTGGGA+CGG + chr5_1:68603765-68603784 Msa0746430:CDS 35.0%
GCCTAGGTAATCTATACTAT+AGG + chr5_1:68603862-68603881 Msa0746430:intron 35.0%
CCCTATAGTATAGATTACCT+AGG - chr5_1:68603866-68603885 None:intergenic 35.0%
AGATCCGTTAAAAATCTGCT+TGG + chr5_1:68603939-68603958 Msa0746430:intron 35.0%
GATCCGTTAAAAATCTGCTT+GGG + chr5_1:68603940-68603959 Msa0746430:intron 35.0%
! TGTCCCAAGCAGATTTTTAA+CGG - chr5_1:68603946-68603965 None:intergenic 35.0%
! TTGTTTGCTGAATCAATGTC+GGG + chr5_1:68604112-68604131 Msa0746430:CDS 35.0%
!!! GTGCAGATTTGTTTTTATCC+TGG + chr5_1:68604401-68604420 Msa0746430:intron 35.0%
! TCTAGTTTCTCATAAGATCC+AGG - chr5_1:68604422-68604441 None:intergenic 35.0%
CAGAAAATTCCACTCTATCT+TGG - chr5_1:68604495-68604514 None:intergenic 35.0%
TGTCTGGATTTCAAAATCGT+AGG + chr5_1:68604730-68604749 Msa0746430:intron 35.0%
!!! TTAAGGGTTTTTTGCATGTC+TGG + chr5_1:68604768-68604787 Msa0746430:intron 35.0%
! TTTTGCATGTCTGGATTATC+CGG + chr5_1:68604777-68604796 Msa0746430:intron 35.0%
!!! CACTTTTTTAACACAGGACT+TGG + chr5_1:68605006-68605025 Msa0746430:intron 35.0%
ATATATATCAACTGAGCCCT+GGG - chr5_1:68605097-68605116 None:intergenic 35.0%
!! GCCTTTTGATTGTAGCAAAA+AGG + chr5_1:68605203-68605222 Msa0746430:CDS 35.0%
! GCCTTTTTGCTACAATCAAA+AGG - chr5_1:68605207-68605226 None:intergenic 35.0%
AATATGATTCTTCTCGGACA+TGG + chr5_1:68605259-68605278 Msa0746430:CDS 35.0%
ATATGATTCTTCTCGGACAT+GGG + chr5_1:68605260-68605279 Msa0746430:CDS 35.0%
AAGATTCTCTTGAAACCTTG+TGG - chr5_1:68605315-68605334 None:intergenic 35.0%
ACAAGGTTTCAAGAGAATCT+TGG + chr5_1:68605314-68605333 Msa0746430:CDS 35.0%
!!! GTTCTCAGTTTTTTACCTGT+AGG - chr5_1:68605384-68605403 None:intergenic 35.0%
TGGTGTCTTGCATAATCTTT+GGG - chr5_1:68605485-68605504 None:intergenic 35.0%
ATGGTGTCTTGCATAATCTT+TGG - chr5_1:68605486-68605505 None:intergenic 35.0%
! TTGCTCAATAAATTCTGGGA+TGG - chr5_1:68605505-68605524 None:intergenic 35.0%
GAGCCTGCTAATATATGTTT+AGG - chr5_1:68605729-68605748 None:intergenic 35.0%
! TCTCCAATATAGTTTGGGAC+GGG + chr5_1:68603766-68603785 Msa0746430:CDS 40.0%
! AGATTACCTAGGCATTGCAA+CGG - chr5_1:68603855-68603874 None:intergenic 40.0%
TTTCTTTCTCTCTTGGTAGG+TGG - chr5_1:68604020-68604039 None:intergenic 40.0%
! CTGAGACAGTGTTTAGAGTT+CGG - chr5_1:68604074-68604093 None:intergenic 40.0%
! GCTAGAAGAAGATGGAGTTT+TGG - chr5_1:68604140-68604159 None:intergenic 40.0%
AACTCCATCTTCTTCTAGCA+AGG + chr5_1:68604141-68604160 Msa0746430:CDS 40.0%
AGTACCTTGCTAGAAGAAGA+TGG - chr5_1:68604148-68604167 None:intergenic 40.0%
TCAATTTGATTCCGAACCCT+AGG + chr5_1:68604357-68604376 Msa0746430:intron 40.0%
! ATGTTGCTGTTAAGTATGGG+TGG + chr5_1:68604548-68604567 Msa0746430:intron 40.0%
AGACAAATCAAAGGGCTTTG+CGG - chr5_1:68604715-68604734 None:intergenic 40.0%
GATTATCCGGACAAATCAGA+GGG + chr5_1:68604790-68604809 Msa0746430:intron 40.0%
AGTCTAACTCATCCCAAAAC+CGG + chr5_1:68604934-68604953 Msa0746430:intron 40.0%
!! ACACCATATAAGCCGGTTTT+GGG - chr5_1:68604949-68604968 None:intergenic 40.0%
!! TACACCATATAAGCCGGTTT+TGG - chr5_1:68604950-68604969 None:intergenic 40.0%
ACACTCTACACCATATAAGC+CGG - chr5_1:68604956-68604975 None:intergenic 40.0%
CATATATATCAACTGAGCCC+TGG - chr5_1:68605098-68605117 None:intergenic 40.0%
GAGAGTGATTGATACACAAG+AGG + chr5_1:68605146-68605165 Msa0746430:CDS 40.0%
TGATACACAAGAGGAGTTTG+AGG + chr5_1:68605155-68605174 Msa0746430:CDS 40.0%
TGCTACAATCAAAAGGCTCT+CGG - chr5_1:68605200-68605219 None:intergenic 40.0%
!! TGTGGAGTCTTTGGAATGTT+AGG - chr5_1:68605297-68605316 None:intergenic 40.0%
AACATTCCAAAGACTCCACA+AGG + chr5_1:68605297-68605316 Msa0746430:CDS 40.0%
TTGAAACCTTGTGGAGTCTT+TGG - chr5_1:68605306-68605325 None:intergenic 40.0%
!! GAGAATCTTGGTGCTTAGAA+AGG + chr5_1:68605326-68605345 Msa0746430:CDS 40.0%
TCTTACTACATCACACCTAC+AGG + chr5_1:68605366-68605385 Msa0746430:CDS 40.0%
ATATGCTGCTATCTCATTGC+GGG - chr5_1:68605406-68605425 None:intergenic 40.0%
GATATGCTGCTATCTCATTG+CGG - chr5_1:68605407-68605426 None:intergenic 40.0%
GGTGTCTTGCATAATCTTTG+GGG - chr5_1:68605484-68605503 None:intergenic 40.0%
GACTTGAGGCAAATTGATTG+AGG - chr5_1:68605801-68605820 None:intergenic 40.0%
! TCTCCAATATAGTTTGGGAC+GGG + chr5_1:68603766-68603785 Msa0746430:CDS 40.0%
! AGATTACCTAGGCATTGCAA+CGG - chr5_1:68603855-68603874 None:intergenic 40.0%
TTTCTTTCTCTCTTGGTAGG+TGG - chr5_1:68604020-68604039 None:intergenic 40.0%
! CTGAGACAGTGTTTAGAGTT+CGG - chr5_1:68604074-68604093 None:intergenic 40.0%
! GCTAGAAGAAGATGGAGTTT+TGG - chr5_1:68604140-68604159 None:intergenic 40.0%
AACTCCATCTTCTTCTAGCA+AGG + chr5_1:68604141-68604160 Msa0746430:CDS 40.0%
AGTACCTTGCTAGAAGAAGA+TGG - chr5_1:68604148-68604167 None:intergenic 40.0%
TCAATTTGATTCCGAACCCT+AGG + chr5_1:68604357-68604376 Msa0746430:intron 40.0%
! ATGTTGCTGTTAAGTATGGG+TGG + chr5_1:68604548-68604567 Msa0746430:intron 40.0%
AGACAAATCAAAGGGCTTTG+CGG - chr5_1:68604715-68604734 None:intergenic 40.0%
GATTATCCGGACAAATCAGA+GGG + chr5_1:68604790-68604809 Msa0746430:intron 40.0%
AGTCTAACTCATCCCAAAAC+CGG + chr5_1:68604934-68604953 Msa0746430:intron 40.0%
!! ACACCATATAAGCCGGTTTT+GGG - chr5_1:68604949-68604968 None:intergenic 40.0%
!! TACACCATATAAGCCGGTTT+TGG - chr5_1:68604950-68604969 None:intergenic 40.0%
ACACTCTACACCATATAAGC+CGG - chr5_1:68604956-68604975 None:intergenic 40.0%
CATATATATCAACTGAGCCC+TGG - chr5_1:68605098-68605117 None:intergenic 40.0%
GAGAGTGATTGATACACAAG+AGG + chr5_1:68605146-68605165 Msa0746430:CDS 40.0%
TGATACACAAGAGGAGTTTG+AGG + chr5_1:68605155-68605174 Msa0746430:CDS 40.0%
TGCTACAATCAAAAGGCTCT+CGG - chr5_1:68605200-68605219 None:intergenic 40.0%
!! TGTGGAGTCTTTGGAATGTT+AGG - chr5_1:68605297-68605316 None:intergenic 40.0%
AACATTCCAAAGACTCCACA+AGG + chr5_1:68605297-68605316 Msa0746430:CDS 40.0%
TTGAAACCTTGTGGAGTCTT+TGG - chr5_1:68605306-68605325 None:intergenic 40.0%
!! GAGAATCTTGGTGCTTAGAA+AGG + chr5_1:68605326-68605345 Msa0746430:CDS 40.0%
TCTTACTACATCACACCTAC+AGG + chr5_1:68605366-68605385 Msa0746430:CDS 40.0%
ATATGCTGCTATCTCATTGC+GGG - chr5_1:68605406-68605425 None:intergenic 40.0%
GATATGCTGCTATCTCATTG+CGG - chr5_1:68605407-68605426 None:intergenic 40.0%
GGTGTCTTGCATAATCTTTG+GGG - chr5_1:68605484-68605503 None:intergenic 40.0%
GACTTGAGGCAAATTGATTG+AGG - chr5_1:68605801-68605820 None:intergenic 40.0%
! CTCCAATATAGTTTGGGACG+GGG + chr5_1:68603767-68603786 Msa0746430:CDS 45.0%
! AATATAGTTTGGGACGGGGT+GGG + chr5_1:68603771-68603790 Msa0746430:CDS 45.0%
! ATTACCTAGGCATTGCAACG+GGG - chr5_1:68603853-68603872 None:intergenic 45.0%
! GATTACCTAGGCATTGCAAC+GGG - chr5_1:68603854-68603873 None:intergenic 45.0%
TAAACAACTGTTCCGTTCGG+TGG + chr5_1:68604040-68604059 Msa0746430:intron 45.0%
AATCTTACGCACCTAGGGTT+CGG - chr5_1:68604371-68604390 None:intergenic 45.0%
!! GCAAAGCCCTTTGATTTGTC+TGG + chr5_1:68604714-68604733 Msa0746430:intron 45.0%
GGATTATCCGGACAAATCAG+AGG + chr5_1:68604789-68604808 Msa0746430:intron 45.0%
! TCAAAGCCCTCTGATTTGTC+CGG - chr5_1:68604799-68604818 None:intergenic 45.0%
! AATTTGGTGGATGACCTGAC+TGG + chr5_1:68604868-68604887 Msa0746430:intron 45.0%
TCTATCCAGTGATTCCAGTC+AGG - chr5_1:68604885-68604904 None:intergenic 45.0%
! CATCCCAAAACCGGCTTATA+TGG + chr5_1:68604943-68604962 Msa0746430:intron 45.0%
GGGTTTATTGTGACAGAGAC+CGG + chr5_1:68605065-68605084 Msa0746430:intron 45.0%
GCTCTCGGATGATCTTATGA+CGG - chr5_1:68605185-68605204 None:intergenic 45.0%
AAAGATCATCCTCAACCCAG+TGG + chr5_1:68605429-68605448 Msa0746430:CDS 45.0%
ATCATCACAAGGTTGCTGCA+TGG + chr5_1:68605581-68605600 Msa0746430:three_prime_UTR 45.0%
GTTAGGGAACACCAATTCAG+TGG + chr5_1:68605662-68605681 Msa0746430:three_prime_UTR 45.0%
! CTCCAATATAGTTTGGGACG+GGG + chr5_1:68603767-68603786 Msa0746430:CDS 45.0%
! AATATAGTTTGGGACGGGGT+GGG + chr5_1:68603771-68603790 Msa0746430:CDS 45.0%
! ATTACCTAGGCATTGCAACG+GGG - chr5_1:68603853-68603872 None:intergenic 45.0%
! GATTACCTAGGCATTGCAAC+GGG - chr5_1:68603854-68603873 None:intergenic 45.0%
TAAACAACTGTTCCGTTCGG+TGG + chr5_1:68604040-68604059 Msa0746430:intron 45.0%
AATCTTACGCACCTAGGGTT+CGG - chr5_1:68604371-68604390 None:intergenic 45.0%
!! GCAAAGCCCTTTGATTTGTC+TGG + chr5_1:68604714-68604733 Msa0746430:intron 45.0%
GGATTATCCGGACAAATCAG+AGG + chr5_1:68604789-68604808 Msa0746430:intron 45.0%
! TCAAAGCCCTCTGATTTGTC+CGG - chr5_1:68604799-68604818 None:intergenic 45.0%
! AATTTGGTGGATGACCTGAC+TGG + chr5_1:68604868-68604887 Msa0746430:intron 45.0%
TCTATCCAGTGATTCCAGTC+AGG - chr5_1:68604885-68604904 None:intergenic 45.0%
! CATCCCAAAACCGGCTTATA+TGG + chr5_1:68604943-68604962 Msa0746430:intron 45.0%
GGGTTTATTGTGACAGAGAC+CGG + chr5_1:68605065-68605084 Msa0746430:intron 45.0%
GCTCTCGGATGATCTTATGA+CGG - chr5_1:68605185-68605204 None:intergenic 45.0%
AAAGATCATCCTCAACCCAG+TGG + chr5_1:68605429-68605448 Msa0746430:CDS 45.0%
ATCATCACAAGGTTGCTGCA+TGG + chr5_1:68605581-68605600 Msa0746430:three_prime_UTR 45.0%
GTTAGGGAACACCAATTCAG+TGG + chr5_1:68605662-68605681 Msa0746430:three_prime_UTR 45.0%
CACCCCGTCCCAAACTATAT+TGG - chr5_1:68603772-68603791 None:intergenic 50.0%
! CAATATAGTTTGGGACGGGG+TGG + chr5_1:68603770-68603789 Msa0746430:CDS 50.0%
! GGTGGTGGCGTTTATAAGAG+AGG - chr5_1:68604002-68604021 None:intergenic 50.0%
CTTTCTCTCTTGGTAGGTGG+TGG - chr5_1:68604017-68604036 None:intergenic 50.0%
TCGGAGAAGATACCACCGAA+CGG - chr5_1:68604055-68604074 None:intergenic 50.0%
!! TCAGAGGGCTTTGAAAAGCG+CGG + chr5_1:68604805-68604824 Msa0746430:intron 50.0%
GATGACCTGACTGGAATCAC+TGG + chr5_1:68604877-68604896 Msa0746430:intron 50.0%
CACCCCGTCCCAAACTATAT+TGG - chr5_1:68603772-68603791 None:intergenic 50.0%
! CAATATAGTTTGGGACGGGG+TGG + chr5_1:68603770-68603789 Msa0746430:CDS 50.0%
! GGTGGTGGCGTTTATAAGAG+AGG - chr5_1:68604002-68604021 None:intergenic 50.0%
CTTTCTCTCTTGGTAGGTGG+TGG - chr5_1:68604017-68604036 None:intergenic 50.0%
TCGGAGAAGATACCACCGAA+CGG - chr5_1:68604055-68604074 None:intergenic 50.0%
!! TCAGAGGGCTTTGAAAAGCG+CGG + chr5_1:68604805-68604824 Msa0746430:intron 50.0%
GATGACCTGACTGGAATCAC+TGG + chr5_1:68604877-68604896 Msa0746430:intron 50.0%
ATGCACAACCCGCCCTCAAT+GGG - chr5_1:68603736-68603755 None:intergenic 55.0%
AATGCACAACCCGCCCTCAA+TGG - chr5_1:68603737-68603756 None:intergenic 55.0%
TCAAAGGGCTTTGCGGAGCA+CGG - chr5_1:68604708-68604727 None:intergenic 55.0%
!! CAGAGGGCTTTGAAAAGCGC+GGG + chr5_1:68604806-68604825 Msa0746430:intron 55.0%
!! GCTTTGAAAAGCGCGGGAGT+TGG + chr5_1:68604812-68604831 Msa0746430:intron 55.0%
! AAAAGCGCGGGAGTTGGAAG+AGG + chr5_1:68604818-68604837 Msa0746430:intron 55.0%
GCAGATACACCACTGGGTTG+AGG - chr5_1:68605441-68605460 None:intergenic 55.0%
ACCCAGTGGTGTATCTGCTG+CGG + chr5_1:68605443-68605462 Msa0746430:CDS 55.0%
TCCGCAGCAGATACACCACT+GGG - chr5_1:68605447-68605466 None:intergenic 55.0%
ATCCGCAGCAGATACACCAC+TGG - chr5_1:68605448-68605467 None:intergenic 55.0%
ATGCACAACCCGCCCTCAAT+GGG - chr5_1:68603736-68603755 None:intergenic 55.0%
AATGCACAACCCGCCCTCAA+TGG - chr5_1:68603737-68603756 None:intergenic 55.0%
TCAAAGGGCTTTGCGGAGCA+CGG - chr5_1:68604708-68604727 None:intergenic 55.0%
!! CAGAGGGCTTTGAAAAGCGC+GGG + chr5_1:68604806-68604825 Msa0746430:intron 55.0%
!! GCTTTGAAAAGCGCGGGAGT+TGG + chr5_1:68604812-68604831 Msa0746430:intron 55.0%
! AAAAGCGCGGGAGTTGGAAG+AGG + chr5_1:68604818-68604837 Msa0746430:intron 55.0%
GCAGATACACCACTGGGTTG+AGG - chr5_1:68605441-68605460 None:intergenic 55.0%
ACCCAGTGGTGTATCTGCTG+CGG + chr5_1:68605443-68605462 Msa0746430:CDS 55.0%
TCCGCAGCAGATACACCACT+GGG - chr5_1:68605447-68605466 None:intergenic 55.0%
ATCCGCAGCAGATACACCAC+TGG - chr5_1:68605448-68605467 None:intergenic 55.0%
CGGAAGATCCGCCCCATTGA+GGG + chr5_1:68603721-68603740 Msa0746430:CDS 60.0%
AAGATCCGCCCCATTGAGGG+CGG + chr5_1:68603724-68603743 Msa0746430:CDS 60.0%
TGCACAACCCGCCCTCAATG+GGG - chr5_1:68603735-68603754 None:intergenic 60.0%
TGGGTGCATGGAAGCGGAAG+CGG + chr5_1:68603790-68603809 Msa0746430:CDS 60.0%
CATGGAAGCGGAAGCGGAAG+CGG + chr5_1:68603796-68603815 Msa0746430:CDS 60.0%
ATGGAAGCGGAAGCGGAAGC+GGG + chr5_1:68603797-68603816 Msa0746430:CDS 60.0%
! ACCTAGGCATTGCAACGGGG+CGG - chr5_1:68603850-68603869 None:intergenic 60.0%
CGGAAGATCCGCCCCATTGA+GGG + chr5_1:68603721-68603740 Msa0746430:CDS 60.0%
AAGATCCGCCCCATTGAGGG+CGG + chr5_1:68603724-68603743 Msa0746430:CDS 60.0%
TGCACAACCCGCCCTCAATG+GGG - chr5_1:68603735-68603754 None:intergenic 60.0%
TGGGTGCATGGAAGCGGAAG+CGG + chr5_1:68603790-68603809 Msa0746430:CDS 60.0%
CATGGAAGCGGAAGCGGAAG+CGG + chr5_1:68603796-68603815 Msa0746430:CDS 60.0%
ATGGAAGCGGAAGCGGAAGC+GGG + chr5_1:68603797-68603816 Msa0746430:CDS 60.0%
! ACCTAGGCATTGCAACGGGG+CGG - chr5_1:68603850-68603869 None:intergenic 60.0%
GCGGAAGATCCGCCCCATTG+AGG + chr5_1:68603720-68603739 Msa0746430:CDS 65.0%
AGATCCGCCCCATTGAGGGC+GGG + chr5_1:68603725-68603744 Msa0746430:CDS 65.0%
ACAACCCGCCCTCAATGGGG+CGG - chr5_1:68603732-68603751 None:intergenic 65.0%
! TTTGGGACGGGGTGGGTGCA+TGG + chr5_1:68603778-68603797 Msa0746430:CDS 65.0%
ACGGGGTGGGTGCATGGAAG+CGG + chr5_1:68603784-68603803 Msa0746430:CDS 65.0%
AGCGGAAGCGGAAGCGGGAA+CGG + chr5_1:68603802-68603821 Msa0746430:CDS 65.0%
! AGGCATTGCAACGGGGCGGT+CGG - chr5_1:68603846-68603865 None:intergenic 65.0%
ACCGCCCCGTTGCAATGCCT+AGG + chr5_1:68603846-68603865 Msa0746430:intron 65.0%
GCTTTGCGGAGCACGGAGAC+CGG - chr5_1:68604701-68604720 None:intergenic 65.0%
ACAGAGACCGGCGATGACCC+AGG + chr5_1:68605077-68605096 Msa0746430:intron 65.0%
CAGAGACCGGCGATGACCCA+GGG + chr5_1:68605078-68605097 Msa0746430:intron 65.0%
ACTGAGCCCTGGGTCATCGC+CGG - chr5_1:68605087-68605106 None:intergenic 65.0%
GCGGAAGATCCGCCCCATTG+AGG + chr5_1:68603720-68603739 Msa0746430:CDS 65.0%
AGATCCGCCCCATTGAGGGC+GGG + chr5_1:68603725-68603744 Msa0746430:CDS 65.0%
ACAACCCGCCCTCAATGGGG+CGG - chr5_1:68603732-68603751 None:intergenic 65.0%
! TTTGGGACGGGGTGGGTGCA+TGG + chr5_1:68603778-68603797 Msa0746430:CDS 65.0%
ACGGGGTGGGTGCATGGAAG+CGG + chr5_1:68603784-68603803 Msa0746430:CDS 65.0%
AGCGGAAGCGGAAGCGGGAA+CGG + chr5_1:68603802-68603821 Msa0746430:CDS 65.0%
! AGGCATTGCAACGGGGCGGT+CGG - chr5_1:68603846-68603865 None:intergenic 65.0%
ACCGCCCCGTTGCAATGCCT+AGG + chr5_1:68603846-68603865 Msa0746430:intron 65.0%
GCTTTGCGGAGCACGGAGAC+CGG - chr5_1:68604701-68604720 None:intergenic 65.0%
ACAGAGACCGGCGATGACCC+AGG + chr5_1:68605077-68605096 Msa0746430:intron 65.0%
CAGAGACCGGCGATGACCCA+GGG + chr5_1:68605078-68605097 Msa0746430:intron 65.0%
ACTGAGCCCTGGGTCATCGC+CGG - chr5_1:68605087-68605106 None:intergenic 65.0%
CATTGCAACGGGGCGGTCGG+AGG - chr5_1:68603843-68603862 None:intergenic 70.0%
CATTGCAACGGGGCGGTCGG+AGG - chr5_1:68603843-68603862 None:intergenic 70.0%
TGCAACGGGGCGGTCGGAGG+CGG - chr5_1:68603840-68603859 None:intergenic 75.0%
TGCAACGGGGCGGTCGGAGG+CGG - chr5_1:68603840-68603859 None:intergenic 75.0%
! GCAACGGGGCGGTCGGAGGC+GGG - chr5_1:68603839-68603858 None:intergenic 80.0%
! GCAACGGGGCGGTCGGAGGC+GGG - chr5_1:68603839-68603858 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 68603707 68605910 68603707 ID=Msa0746430;Name=Msa0746430
chr5_1 mRNA 68603707 68605910 68603707 ID=Msa0746430-mRNA-1;Parent=Msa0746430;Name=Msa0746430-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.5|0.33|0.66|1|1|3|335|226
chr5_1 exon 68603707 68603823 68603707 ID=Msa0746430-mRNA-1:exon:20470;Parent=Msa0746430-mRNA-1
chr5_1 exon 68604094 68604162 68604094 ID=Msa0746430-mRNA-1:exon:20471;Parent=Msa0746430-mRNA-1
chr5_1 exon 68605081 68605910 68605081 ID=Msa0746430-mRNA-1:exon:20472;Parent=Msa0746430-mRNA-1
chr5_1 CDS 68603707 68603823 68603707 ID=Msa0746430-mRNA-1:cds;Parent=Msa0746430-mRNA-1
chr5_1 CDS 68604094 68604162 68604094 ID=Msa0746430-mRNA-1:cds;Parent=Msa0746430-mRNA-1
chr5_1 CDS 68605081 68605575 68605081 ID=Msa0746430-mRNA-1:cds;Parent=Msa0746430-mRNA-1
chr5_1 three_prime_UTR 68605576 68605910 68605576 ID=Msa0746430-mRNA-1:three_prime_utr;Parent=Msa0746430-mRNA-1
Gene Sequence

>Msa0746430

ATGTGGGGTGGTGGCGGAAGATCCGCCCCATTGAGGGCGGGTTGTGCATTCAATTTTTATCTCCAATATAGTTTGGGACGGGGTGGGTGCATGGAAGCGGAAGCGGAAGCGGGAACGTCAGAGCGTGAGAGAAATTTGTTTGCTGAATCAATGTCGGGCTCCAAAACTCCATCTTCTTCTAGCAAGAGACCGGCGATGACCCAGGGCTCAGTTGATATATATGCTGCACAATGCAAACTTTGCATGAAATGGAGAGTGATTGATACACAAGAGGAGTTTGAGGAGATCCGTCATAAGATCATCCGAGAGCCTTTTGATTGTAGCAAAAAGGCTAATCGTAGCTGTGATGATCCTGCTGATATTGAATATGATTCTTCTCGGACATGGGTCATTGACAAGCCTAACATTCCAAAGACTCCACAAGGTTTCAAGAGAATCTTGGTGCTTAGAAAGGATTACTCTAAGTTGGACTCTTACTACATCACACCTACAGGTAAAAAACTGAGAACCCGCAATGAGATAGCAGCATATCTTAAAGATCATCCTCAACCCAGTGGTGTATCTGCTGCGGATTTTGATTTTTCATCCCCAAAGATTATGCAAGACACCATCCCAGAATTTATTGAGCAACAGAAGGATTCTGCAAACAAAAAAGCTAAGATATCTAAAGATGAAGTTTGA
Protein sequence

>Msa0746430

MWGGGGRSAPLRAGCAFNFYLQYSLGRGGCMEAEAEAGTSERERNLFAESMSGSKTPSSSSKRPAMTQGSVDIYAAQCKLCMKWRVIDTQEEFEEIRHKIIREPFDCSKKANRSCDDPADIEYDSSRTWVIDKPNIPKTPQGFKRILVLRKDYSKLDSYYITPTGKKLRTRNEIAAYLKDHPQPSGVSAADFDFSSPKIMQDTIPEFIEQQKDSANKKAKISKDEV*