AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0318980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0318980 MtrunA17_Chr2g0292961 84.247 876 37 5 1 872 1 779 0.0 1443
Msa0318980 MtrunA17_Chr5g0442241 50.171 293 112 4 613 872 384 675 2.20e-73 254
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0318980 AT2G34780.3 29.545 880 493 27 46 869 423 1231 3.05e-70 253
Msa0318980 AT2G34780.4 29.545 880 493 27 46 869 423 1231 3.05e-70 253
Msa0318980 AT2G34780.2 29.545 880 493 27 46 869 423 1231 3.05e-70 253
Msa0318980 AT2G34780.1 29.545 880 493 27 46 869 484 1292 3.56e-70 253

Find 251 sgRNAs with CRISPR-Local

Find 566 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTCTTTGGAAAATTTA+AGG 0.058964 2_4:+18185722 Msa0318980:CDS
GAGATTTCTTTCTCTTCTTA+TGG 0.139780 2_4:-18185216 None:intergenic
CTGATGTTGCTCTCAAATTT+TGG 0.147694 2_4:+18190174 Msa0318980:three_prime_UTR
AACATTTGCTTTGGATAATA+TGG 0.150474 2_4:+18185525 Msa0318980:CDS
AATTAAGATAAACGCCATTT+TGG 0.172432 2_4:-18190303 None:intergenic
GGCCTTCTCTGCCTCAATTT+TGG 0.175904 2_4:-18183053 None:intergenic
AAAACTAACTGTACAGATTA+TGG 0.182680 2_4:+18190117 Msa0318980:three_prime_UTR
CAGCATCAACTTCCTAATTT+TGG 0.184911 2_4:+18185781 Msa0318980:CDS
TACAGGTATTGGTTCTAAAT+TGG 0.200405 2_4:+18184787 Msa0318980:CDS
AAATTTAAGGGATACATTTC+TGG 0.202649 2_4:+18185735 Msa0318980:CDS
AGTAAAGGTATGTAGATAAA+AGG 0.205465 2_4:+18184272 Msa0318980:five_prime_UTR
GTTGCTATCATTGTTCTTCT+TGG 0.229043 2_4:+18188913 Msa0318980:CDS
CTGATGACGCTGGAAGTTTA+AGG 0.262335 2_4:+18189965 Msa0318980:CDS
AAGTTCTCCTCGGCTGATTT+TGG 0.265785 2_4:-18184938 None:intergenic
ACAGGTGCTCAGGAAGAAAA+TGG 0.271259 2_4:+18182860 Msa0318980:five_prime_UTR
GTTGCAGGACACTCATTCTT+TGG 0.274854 2_4:+18185711 Msa0318980:CDS
TGAAAGTGATAGAGGGTTTA+GGG 0.280133 2_4:+18180920 Msa0318980:five_prime_UTR
AACTGTTGTTCTTGCTGAAA+TGG 0.281628 2_4:-18187820 None:intergenic
AAGAGAAGTGCCTGCTTTCA+TGG 0.287462 2_4:-18189839 None:intergenic
TGAAATAAGTCAAACAATAA+AGG 0.290306 2_4:-18184364 None:intergenic
AGATTTCTTTCTCTTCTTAT+GGG 0.290903 2_4:-18185215 None:intergenic
AAAACAAACCCTGGGTGATT+TGG 0.291304 2_4:+18180850 Msa0318980:five_prime_UTR
CTTTCAGACAATTATAATAA+TGG 0.296754 2_4:+18187865 Msa0318980:CDS
TTGAAAGTGATAGAGGGTTT+AGG 0.300632 2_4:+18180919 Msa0318980:five_prime_UTR
TGTGCTGCAACTGATTATAT+TGG 0.303673 2_4:+18187478 Msa0318980:CDS
TTCCTCGCTCGCGCTTCTAA+TGG 0.306463 2_4:+18181008 Msa0318980:five_prime_UTR
TTGTTCAGTTCAGCAATTTC+AGG 0.307058 2_4:+18190324 Msa0318980:three_prime_UTR
TGTACAGATTATGGGAAATT+AGG 0.311889 2_4:+18190126 Msa0318980:three_prime_UTR
TCCTCATAGACTACAGCTTT+TGG 0.312141 2_4:-18185289 None:intergenic
TTCCTTATCCCTATCATAAT+CGG 0.318545 2_4:-18182903 None:intergenic
TCGCTCTCGCTAATTCTTCC+TGG 0.324388 2_4:-18182730 None:intergenic
TATCAATTTACTATCCAAAA+TGG 0.325842 2_4:+18190289 Msa0318980:three_prime_UTR
GTCTGAAAGGGATCTGAAAT+TGG 0.330336 2_4:-18187851 None:intergenic
TTGGTGCATGCGATTCTTTA+AGG 0.337806 2_4:+18184705 Msa0318980:CDS
CCATCTGACAGATCAGTTAT+TGG 0.341357 2_4:+18184986 Msa0318980:CDS
AGAAAACCCAATGAAATATC+TGG 0.343488 2_4:+18183442 Msa0318980:five_prime_UTR
CTTTGAAAGCCGATTATGAT+AGG 0.345347 2_4:+18182894 Msa0318980:five_prime_UTR
GCAGACTGAGTTCAGTCTTC+AGG 0.348872 2_4:+18189921 Msa0318980:CDS
CGAGACTGAAACATTTGCTT+TGG 0.351796 2_4:+18185516 Msa0318980:CDS
TCACTTTCAGCATTCACATT+AGG 0.351930 2_4:-18183472 None:intergenic
GTAAAGGTATGTAGATAAAA+GGG 0.352529 2_4:+18184273 Msa0318980:five_prime_UTR
AACTTTGATGAAATATATAA+TGG 0.353085 2_4:+18185400 Msa0318980:CDS
GACTTATTTCAATATGTTAG+TGG 0.353474 2_4:+18184376 Msa0318980:five_prime_UTR
TGCTGAAGCTAGTAAGTTAT+TGG 0.354050 2_4:+18183012 Msa0318980:five_prime_UTR
TCCTGGTAAAACTTATTTGT+TGG 0.354364 2_4:+18184102 Msa0318980:five_prime_UTR
GATACTATGAGACCAAAATT+AGG 0.355682 2_4:-18185793 None:intergenic
TCTACTGCCACTGCACTGTT+TGG 0.355682 2_4:+18189868 Msa0318980:CDS
TTTAGAACCAATACCTGTAA+TGG 0.360175 2_4:-18184783 None:intergenic
AGGATGCATCCAGCATATTA+AGG 0.364535 2_4:-18183687 None:intergenic
TCATTCTTTGGAAAATTTAA+GGG 0.365196 2_4:+18185723 Msa0318980:CDS
ACCGAACCCATTACAGGTAT+TGG 0.365844 2_4:+18184776 Msa0318980:CDS
TCCTCAGCTGCTTCATGTAC+TGG 0.369408 2_4:+18188864 Msa0318980:CDS
AGGCATCATATAATATTCTT+AGG 0.376379 2_4:+18187512 Msa0318980:CDS
ACCATGACTGCAATGAAGTT+TGG 0.379991 2_4:+18186604 Msa0318980:CDS
AGAGGCTTGCTCAAGATAAC+TGG 0.381498 2_4:+18183308 Msa0318980:five_prime_UTR
GTGCTGCAACTGATTATATT+GGG 0.382598 2_4:+18187479 Msa0318980:CDS
GAAATAAGTCAAACAATAAA+GGG 0.383190 2_4:-18184363 None:intergenic
GCTAGTAAGTTATTGGATAA+GGG 0.392277 2_4:+18183019 Msa0318980:five_prime_UTR
TTATTGGTCATGATGGAATA+AGG 0.395603 2_4:+18185002 Msa0318980:CDS
AGAAGAGAAAGAAATCTCAT+AGG 0.395810 2_4:+18185221 Msa0318980:CDS
TTTCAAAGCCTTGCAGCATA+AGG 0.397707 2_4:+18184681 Msa0318980:CDS
TAATGGACAGTGCTCTAATC+AGG 0.399536 2_4:+18187882 Msa0318980:CDS
GTGAAGATAGAAATTGTAAA+AGG 0.400533 2_4:+18184456 Msa0318980:five_prime_UTR
TTGAAGGAGATGAATCTCTT+TGG 0.401742 2_4:-18185588 None:intergenic
TTAGAACCAATACCTGTAAT+GGG 0.403828 2_4:-18184782 None:intergenic
CAGAGAAGGCCGAGGAGTAT+AGG 0.405289 2_4:+18183065 Msa0318980:five_prime_UTR
TAGGCTTCAGCAAGTTCGTT+TGG 0.405325 2_4:+18183084 Msa0318980:five_prime_UTR
GGAGCTTGTTGCAAACAAAA+TGG 0.406361 2_4:+18187945 Msa0318980:CDS
AGCTAGTAAGTTATTGGATA+AGG 0.407822 2_4:+18183018 Msa0318980:five_prime_UTR
TCAACAGAGCTGTGCATTTG+AGG 0.408398 2_4:-18184650 None:intergenic
AAACTAACTGTACAGATTAT+GGG 0.410486 2_4:+18190118 Msa0318980:three_prime_UTR
CTCGTGCAGTTATGGCTTGA+TGG 0.410551 2_4:+18187612 Msa0318980:CDS
GAATAAAATCAAGCTTTAAA+CGG 0.411283 2_4:-18183651 None:intergenic
GTATGCAGCTGATTTATTGC+TGG 0.415896 2_4:-18187703 None:intergenic
TCTAAATTGGAGCCTCTCAT+AGG 0.417092 2_4:+18184800 Msa0318980:CDS
CTAAAAGAAAGTCTTCAATA+AGG 0.417219 2_4:-18187300 None:intergenic
ACATCAGGTTTCTGCATGCT+TGG 0.417771 2_4:-18184599 None:intergenic
TTTCTGGTGGAGACTGGAAC+TGG 0.423502 2_4:+18185751 Msa0318980:CDS
AATTATACCGAACCCATTAC+AGG 0.424864 2_4:+18184770 Msa0318980:CDS
AGGAATTGCAAATGCATCAT+TGG 0.426650 2_4:-18185644 None:intergenic
GATACTCCAGATATTTCATT+GGG 0.427376 2_4:-18183448 None:intergenic
TAGTGACATTCTCTCGTTGT+TGG 0.431473 2_4:+18187924 Msa0318980:CDS
TTGTGGAGAAAGAAAAGAAA+AGG 0.433199 2_4:+18182945 Msa0318980:five_prime_UTR
ATTGTTCTTCTTGGTCAGCT+TGG 0.434545 2_4:+18188922 Msa0318980:CDS
AGATACTCCAGATATTTCAT+TGG 0.436128 2_4:-18183449 None:intergenic
TTAGGATGACAGCATTTGAT+TGG 0.439837 2_4:+18184062 Msa0318980:intron
TTGTATAGCACGGTGCAGTT+TGG 0.442206 2_4:+18185867 Msa0318980:CDS
AGTTCTTCACACAGACTTGT+TGG 0.446513 2_4:+18185564 Msa0318980:CDS
ATTTCGTGATTCTTGAAACT+TGG 0.447040 2_4:-18181271 None:intergenic
CAGAGTTGAGTCACGACATC+AGG 0.447147 2_4:-18184614 None:intergenic
CTTGATGGGCTCACAGGAAA+GGG 0.447613 2_4:+18184892 Msa0318980:CDS
TGAAGAACTTCATTCTGAAA+AGG 0.448858 2_4:-18185550 None:intergenic
AGAAGCTCTTAGTGGAGAAA+AGG 0.457969 2_4:+18183194 Msa0318980:five_prime_UTR
CAGGTGCTCAGGAAGAAAAT+GGG 0.458762 2_4:+18182861 Msa0318980:five_prime_UTR
ACGCTGGAAGTTTAAGGAAG+TGG 0.465063 2_4:+18189971 Msa0318980:CDS
TGCAGTTTGGATACTCAAAC+TGG 0.465852 2_4:+18185880 Msa0318980:CDS
AAAGCAAATGTTTCAGTCTC+GGG 0.466468 2_4:-18185514 None:intergenic
AGGATAATAGTTGCATATCT+AGG 0.467438 2_4:+18185824 Msa0318980:CDS
GAAATGTGGCACAGGTGCTC+AGG 0.470366 2_4:+18182850 Msa0318980:five_prime_UTR
CTACAATCACCTTAATATGC+TGG 0.470595 2_4:+18183678 Msa0318980:five_prime_UTR
ACCAATACCTGTAATGGGTT+CGG 0.471714 2_4:-18184777 None:intergenic
GATACATTTCTGGTGGAGAC+TGG 0.473835 2_4:+18185745 Msa0318980:CDS
TTCTTCTTGGTCAGCTTGGA+AGG 0.474026 2_4:+18188926 Msa0318980:CDS
GACTCGGCACCTTCTGAGAA+AGG 0.474893 2_4:-18187751 None:intergenic
TATTTCATCAAAGTTGTTTG+AGG 0.475196 2_4:-18185392 None:intergenic
GAAGGATAAGAAGGTAATTG+AGG 0.476320 2_4:+18183384 Msa0318980:five_prime_UTR
CAAAGCAAATGTTTCAGTCT+CGG 0.476932 2_4:-18185515 None:intergenic
GGAAGAAGTTTGAGCATGAA+AGG 0.478134 2_4:+18183575 Msa0318980:five_prime_UTR
AAACCCTCTATCACTTTCAA+TGG 0.479284 2_4:-18180916 None:intergenic
TAATGAACACAGGGCAAAGC+AGG 0.480131 2_4:+18185669 Msa0318980:CDS
TTTGCCCTGTGTTCATTACA+AGG 0.482017 2_4:-18185664 None:intergenic
CATTATTATAATTGTCTGAA+AGG 0.482615 2_4:-18187864 None:intergenic
ACAAACTGATGTGAAGTTGC+AGG 0.483514 2_4:+18185696 Msa0318980:CDS
TGTAGTTTCTGCAGCATACC+AGG 0.488807 2_4:+18182712 Msa0318980:intron
CCTTTACTTATAGAGAAAGC+TGG 0.489691 2_4:-18184257 None:intergenic
ATCTCTAGTCATGTTTCTTG+AGG 0.490698 2_4:+18187648 Msa0318980:CDS
ATCTACATGCAGAGAATGAC+AGG 0.492112 2_4:+18185191 Msa0318980:CDS
ATTATTATAATTGTCTGAAA+GGG 0.492427 2_4:-18187863 None:intergenic
GTCATGATGGAATAAGGAAT+AGG 0.495269 2_4:+18185008 Msa0318980:CDS
GAAGAGAAAGAAATCTCATA+GGG 0.499332 2_4:+18185222 Msa0318980:CDS
TCTCTAGTCATGTTTCTTGA+GGG 0.502041 2_4:+18187649 Msa0318980:CDS
ATGACATCACATCTAGTTGA+AGG 0.503133 2_4:-18185604 None:intergenic
AGCCGATTATGATAGGGATA+AGG 0.505472 2_4:+18182901 Msa0318980:five_prime_UTR
CCAGCTTTCTCTATAAGTAA+AGG 0.506681 2_4:+18184257 Msa0318980:five_prime_UTR
CAGCATTTGATTGGCAGAAG+AGG 0.508571 2_4:+18184071 Msa0318980:five_prime_UTR
GATTTCTTTCTCTTCTTATG+GGG 0.510360 2_4:-18185214 None:intergenic
CCACTTCTTGCTATATCTGA+AGG 0.510679 2_4:+18184746 Msa0318980:CDS
ACTTCCAGCGACAGGTGAAA+AGG 0.512164 2_4:-18183707 None:intergenic
AGATCAGTTATTGGTCATGA+TGG 0.512517 2_4:+18184995 Msa0318980:CDS
TGCACACTTGATGGGCTCAC+AGG 0.512807 2_4:+18184886 Msa0318980:CDS
GTTAAATGCCCTTTCTCAGA+AGG 0.513109 2_4:+18187742 Msa0318980:CDS
GTGACTCAACTCTGCAGTCT+AGG 0.513442 2_4:+18184623 Msa0318980:CDS
TTGGTCTCATAGTATCGGAT+AGG 0.513806 2_4:+18185800 Msa0318980:CDS
TGAAAGATTGAAGAAACTTG+TGG 0.515782 2_4:+18182928 Msa0318980:five_prime_UTR
CAACGATGTAACAACATCAA+TGG 0.516657 2_4:-18187773 None:intergenic
CATTCTGTCTGCAGTTGACA+TGG 0.518798 2_4:+18185918 Msa0318980:CDS
TCAAACTACTCAGGCATGTA+GGG 0.519897 2_4:+18185354 Msa0318980:CDS
TAGTCATGTTTCTTGAGGGA+GGG 0.520599 2_4:+18187653 Msa0318980:CDS
AGCATGCAGATGAGCAGAAG+AGG 0.520953 2_4:+18183290 Msa0318980:five_prime_UTR
GGAGTTATTGAAGGATAAGA+AGG 0.522235 2_4:+18183375 Msa0318980:five_prime_UTR
TCGTCCATTGAAAGTGATAG+AGG 0.523492 2_4:+18180912 Msa0318980:five_prime_UTR
CAGAAGAGGAAGACAAATCC+TGG 0.524684 2_4:+18184085 Msa0318980:five_prime_UTR
AAAATGAACGAATCCGTTGA+AGG 0.524733 2_4:+18185136 Msa0318980:CDS
CAATTCCTTGTAATGAACAC+AGG 0.526138 2_4:+18185659 Msa0318980:CDS
TTATATTGGGTTTATTTCTG+AGG 0.527641 2_4:+18187492 Msa0318980:CDS
ACGAGAGAATGTCACTAAGT+TGG 0.527938 2_4:-18187918 None:intergenic
AAGCCTTGCAGCATAAGGAT+TGG 0.528737 2_4:+18184686 Msa0318980:CDS
TCATCAGAAATAGATTTACT+AGG 0.528934 2_4:-18189949 None:intergenic
TTCCAAAATTGAGGCAGAGA+AGG 0.531688 2_4:+18183051 Msa0318980:five_prime_UTR
CTGTTTGAGCCTCCTATGAG+AGG 0.531881 2_4:-18184812 None:intergenic
TGCAATTCTTCCATGAAAGC+AGG 0.532856 2_4:+18189829 Msa0318980:CDS
CTCAAACTACTCAGGCATGT+AGG 0.533248 2_4:+18185353 Msa0318980:CDS
CATCTCTCTCCCTCCTTCAA+CGG 0.533480 2_4:-18185149 None:intergenic
TCTTAAAGAACTCAATGCTA+AGG 0.534458 2_4:+18182772 Msa0318980:five_prime_UTR
CTCGCTCGCGCTTCTAATGG+CGG 0.537445 2_4:+18181011 Msa0318980:five_prime_UTR
GATGCAGCTTTCCAAAATTG+AGG 0.537975 2_4:+18183042 Msa0318980:five_prime_UTR
TGAGTTGTCAAAGTTTGAAG+AGG 0.538606 2_4:+18183144 Msa0318980:five_prime_UTR
AATTACGTGCAAAGCATGCA+AGG 0.538964 2_4:+18183533 Msa0318980:five_prime_UTR
GAGGTCTCAGGAGTTATTGA+AGG 0.539380 2_4:+18183366 Msa0318980:five_prime_UTR
TCTTGCTTATCAGAGGTCTC+AGG 0.540938 2_4:+18183354 Msa0318980:five_prime_UTR
GAATGCTTGTTCTGCCGCCA+TGG 0.540941 2_4:-18181081 None:intergenic
GAAGAAAAGAAGAGTCAAGA+AGG 0.541720 2_4:-18180988 None:intergenic
GTAGTTTGAGCATATAATGC+AGG 0.542171 2_4:-18185340 None:intergenic
TGGTCTCATAGTATCGGATA+GGG 0.542983 2_4:+18185801 Msa0318980:CDS
AAAAGCTCAAGAGCAGGCAG+AGG 0.543527 2_4:+18183237 Msa0318980:five_prime_UTR
TCCAAAAGCTGTAGTCTATG+AGG 0.543533 2_4:+18185288 Msa0318980:CDS
TACGAACGAGCAGTTGGTAG+CGG 0.545437 2_4:+18187432 Msa0318980:CDS
GTTTGGATACTCAAACTGGA+TGG 0.545507 2_4:+18185884 Msa0318980:CDS
GTCTAAAATGATCATTCAGT+GGG 0.546294 2_4:-18190045 None:intergenic
CTAGTAAGTTATTGGATAAG+GGG 0.547146 2_4:+18183020 Msa0318980:five_prime_UTR
TTTGAAAGCCGATTATGATA+GGG 0.547536 2_4:+18182895 Msa0318980:five_prime_UTR
TCTTGCATTGAAGTTCTCCT+CGG 0.548596 2_4:-18184948 None:intergenic
TGTGGAGAAAGAAAAGAAAA+GGG 0.549198 2_4:+18182946 Msa0318980:five_prime_UTR
TGTTGCAAATTTGTCTTCTG+AGG 0.550927 2_4:+18185051 Msa0318980:CDS
AAGGGCTGATTCTGAGAAGA+AGG 0.552470 2_4:+18182964 Msa0318980:five_prime_UTR
ACTCAAACTGGATGGGCAGT+TGG 0.552580 2_4:+18185892 Msa0318980:CDS
ATTCTAAATCAAGAGGAAGA+AGG 0.552703 2_4:-18189891 None:intergenic
TCAGTCTCGGGAAAATATAG+TGG 0.555152 2_4:-18185502 None:intergenic
ACTTGATGGGCTCACAGGAA+AGG 0.556320 2_4:+18184891 Msa0318980:CDS
TGTTAAATTACTTGAACGAA+AGG 0.557535 2_4:+18181308 Msa0318980:five_prime_UTR
AGGCTTGGAGTTGATGTTGG+TGG 0.560513 2_4:+18189754 Msa0318980:intron
CTAGTCATGTTTCTTGAGGG+AGG 0.561422 2_4:+18187652 Msa0318980:CDS
TCCAGTACATGAAGCAGCTG+AGG 0.562442 2_4:-18188865 None:intergenic
ACCAGGCTTGGAGTTGATGT+TGG 0.563290 2_4:+18189751 Msa0318980:intron
AAGTATACACGGACTAGCTA+AGG 0.563390 2_4:+18183726 Msa0318980:five_prime_UTR
TGAACGAATCCGTTGAAGGA+GGG 0.564652 2_4:+18185140 Msa0318980:CDS
CGTCCATTGAAAGTGATAGA+GGG 0.566174 2_4:+18180913 Msa0318980:five_prime_UTR
ATCTCAAATTCTCAACTCCA+TGG 0.567111 2_4:-18189786 None:intergenic
ATTATATGCTCAAACTACTC+AGG 0.570062 2_4:+18185345 Msa0318980:CDS
CTTAGAAAATGCTGTTGATG+AGG 0.571987 2_4:+18185444 Msa0318980:CDS
GGGAAAAGTTAAAACATGAA+AGG 0.572495 2_4:+18183554 Msa0318980:five_prime_UTR
CCGTGTATACTTCCAGCGAC+AGG 0.573559 2_4:-18183715 None:intergenic
TTTAAGGGATACATTTCTGG+TGG 0.575251 2_4:+18185738 Msa0318980:CDS
ACCAAACTTCATTGCAGTCA+TGG 0.576366 2_4:-18186605 None:intergenic
ACTCGGCACCTTCTGAGAAA+GGG 0.578787 2_4:-18187750 None:intergenic
AGAAGCTACGAACGAGCAGT+TGG 0.581592 2_4:+18187426 Msa0318980:CDS
CCTTCAGATATAGCAAGAAG+TGG 0.581879 2_4:-18184746 None:intergenic
GCTGAAACTGCTGACTGAGT+TGG 0.582070 2_4:+18184142 Msa0318980:five_prime_UTR
CGCCATTAGAAGCGCGAGCG+AGG 0.583131 2_4:-18181010 None:intergenic
CCTGTCGCTGGAAGTATACA+CGG 0.586411 2_4:+18183715 Msa0318980:five_prime_UTR
GAAAGTGATTCTAAATCAAG+AGG 0.589562 2_4:-18189898 None:intergenic
CTATCAGATGAGGTCTCAGT+AGG 0.591153 2_4:-18187352 None:intergenic
CAAAACATCTTGCTTATCAG+AGG 0.592417 2_4:+18183347 Msa0318980:five_prime_UTR
CACTTCTTGCTATATCTGAA+GGG 0.593010 2_4:+18184747 Msa0318980:CDS
GGAAGAAAATGGGGATGTGA+AGG 0.594233 2_4:+18182871 Msa0318980:five_prime_UTR
AAATTGGAGCCTCTCATAGG+AGG 0.594640 2_4:+18184803 Msa0318980:CDS
TAAAGGTATGTAGATAAAAG+GGG 0.597215 2_4:+18184274 Msa0318980:five_prime_UTR
AATTGAGGCAGAGAAGGCCG+AGG 0.598023 2_4:+18183057 Msa0318980:five_prime_UTR
TTGCAGCAGAAATGTGGCAC+AGG 0.598791 2_4:+18182842 Msa0318980:five_prime_UTR
AAATCTATTTCTGATGACGC+TGG 0.599775 2_4:+18189955 Msa0318980:CDS
TGTACTGGACTCTTGTGCTG+TGG 0.600468 2_4:+18188879 Msa0318980:CDS
GATAAGCTCTCTGACTTGTG+TGG 0.601664 2_4:+18185100 Msa0318980:CDS
GCACCAATCCTTATGCTGCA+AGG 0.601742 2_4:-18184689 None:intergenic
CCAATAACTGATCTGTCAGA+TGG 0.601870 2_4:-18184986 None:intergenic
CGTCTAAAATGATCATTCAG+TGG 0.603001 2_4:-18190046 None:intergenic
AGAATGTCACTAAGTTGGCA+TGG 0.603312 2_4:-18187913 None:intergenic
CGTTGAAGGAGGGAGAGAGA+TGG 0.605052 2_4:+18185150 Msa0318980:CDS
GAGAGATGGTTACTAATCAG+AGG 0.609312 2_4:+18185164 Msa0318980:CDS
TTGCTGAAGCCTATACTCCT+CGG 0.610766 2_4:-18183074 None:intergenic
TCTCAAATTACTATCAGATG+AGG 0.612962 2_4:-18187362 None:intergenic
TTTGGATACTCAAACTGGAT+GGG 0.614156 2_4:+18185885 Msa0318980:CDS
ATGAACGAATCCGTTGAAGG+AGG 0.618103 2_4:+18185139 Msa0318980:CDS
GTAGTCTATGAGGATGCAGA+TGG 0.620856 2_4:+18185298 Msa0318980:CDS
CTGCAAGAAGTTGTATAGCA+CGG 0.621117 2_4:+18185857 Msa0318980:CDS
GGGAAAATATAGTGGTGACA+AGG 0.621219 2_4:-18185494 None:intergenic
GTTGCAAATTTGTCTTCTGA+GGG 0.622091 2_4:+18185052 Msa0318980:CDS
ACAGTGCTCTAATCAGGATG+TGG 0.623475 2_4:+18187888 Msa0318980:CDS
ACTGCATTGCAGCAGAAATG+TGG 0.627969 2_4:+18182836 Msa0318980:five_prime_UTR
AAGAAGGCCAAACAGTGCAG+TGG 0.630185 2_4:-18189875 None:intergenic
CAGCATAAGAACTCAAGCAA+AGG 0.637218 2_4:-18186642 None:intergenic
TGTAACAACATCAATGGACT+CGG 0.637622 2_4:-18187767 None:intergenic
AGAGATGGTTACTAATCAGA+GGG 0.639120 2_4:+18185165 Msa0318980:CDS
CATACATGTGCATATGAGAG+AGG 0.639402 2_4:-18180963 None:intergenic
ACAGATTATGGGAAATTAGG+CGG 0.640396 2_4:+18190129 Msa0318980:three_prime_UTR
TTTGTTATCATTCTTCATCG+AGG 0.640900 2_4:+18190083 Msa0318980:three_prime_UTR
TATGCTGAACACATCTGCAG+AGG 0.643601 2_4:+18186658 Msa0318980:CDS
AAAGAAAGTCTTCAATAAGG+CGG 0.649124 2_4:-18187297 None:intergenic
ATGACTGCAATGAAGTTTGG+TGG 0.653164 2_4:+18186607 Msa0318980:CDS
AGGTGCTCAGGAAGAAAATG+GGG 0.654066 2_4:+18182862 Msa0318980:five_prime_UTR
TTGATGGGCTCACAGGAAAG+GGG 0.655794 2_4:+18184893 Msa0318980:CDS
GGAAAATATAGTGGTGACAA+GGG 0.656458 2_4:-18185493 None:intergenic
AATTCCTTGTAATGAACACA+GGG 0.656748 2_4:+18185660 Msa0318980:CDS
ATTACGTGCAAAGCATGCAA+GGG 0.659492 2_4:+18183534 Msa0318980:five_prime_UTR
TCAGATATAGCAAGAAGTGG+AGG 0.662696 2_4:-18184743 None:intergenic
CACATCACCAAAATCAGCCG+AGG 0.667694 2_4:+18184931 Msa0318980:CDS
ACTGCAATGAAGTTTGGTGG+TGG 0.669354 2_4:+18186610 Msa0318980:CDS
TCTCATAGTATCGGATAGGG+AGG 0.673146 2_4:+18185804 Msa0318980:CDS
TGAAAATCACTGTTGCGCTG+AGG 0.683993 2_4:+18181118 Msa0318980:five_prime_UTR
GTTGGTGGATATGAAGACCA+TGG 0.706502 2_4:+18189769 Msa0318980:CDS
TTGTGCTGTGGAGAACGCTG+CGG 0.716307 2_4:+18188891 Msa0318980:CDS
AAATCAACAATAAACCATGG+CGG 0.745719 2_4:+18181067 Msa0318980:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAAAATAAAATTATTGATTA+AGG + chr2_4:18181462-18181481 Msa0318980:intron 10.0%
!!! TATTGTATAATTTTTTATGA+TGG + chr2_4:18186502-18186521 Msa0318980:intron 10.0%
!! ATTGAAATTATATTAACTAT+AGG + chr2_4:18187159-18187178 Msa0318980:intron 10.0%
!!! ATATTATTGTATTTATTTTC+TGG - chr2_4:18188093-18188112 None:intergenic 10.0%
!! CTACATTATAAAATTAATAT+GGG + chr2_4:18188127-18188146 Msa0318980:intron 10.0%
!! AGGAAAAAGAAAAATAAAAA+GGG - chr2_4:18182642-18182661 None:intergenic 15.0%
!! ATTAAAAAATTATCACAGTT+AGG - chr2_4:18184404-18184423 None:intergenic 15.0%
!!! TAACTGTGATAATTTTTTAA+TGG + chr2_4:18184403-18184422 Msa0318980:five_prime_UTR 15.0%
!! AACTTTGATGAAATATATAA+TGG + chr2_4:18185400-18185419 Msa0318980:CDS 15.0%
!!! TATTGTATAGTTTTTTATGA+AGG + chr2_4:18186225-18186244 Msa0318980:intron 15.0%
!! ATATTATCTTCAATATCAAT+TGG - chr2_4:18186926-18186945 None:intergenic 15.0%
!!! TTATAACTTCTCTATTTTTT+TGG + chr2_4:18187209-18187228 Msa0318980:intron 15.0%
!!! TATAACTTCTCTATTTTTTT+GGG + chr2_4:18187210-18187229 Msa0318980:intron 15.0%
!! ATTATTATAATTGTCTGAAA+GGG - chr2_4:18187866-18187885 None:intergenic 15.0%
!!! CCATATTAATTTTATAATGT+AGG - chr2_4:18188129-18188148 None:intergenic 15.0%
!! CCTACATTATAAAATTAATA+TGG + chr2_4:18188126-18188145 Msa0318980:intron 15.0%
!!! TTCAATTGTTTTTTTTTTTG+AGG + chr2_4:18188519-18188538 Msa0318980:intron 15.0%
!!! TCAATTGTTTTTTTTTTTGA+GGG + chr2_4:18188520-18188539 Msa0318980:intron 15.0%
!! CAAAAAAGAAAATATTTACA+AGG - chr2_4:18188690-18188709 None:intergenic 15.0%
!!! TTTTTTTTATCCTATTTCAT+CGG - chr2_4:18189302-18189321 None:intergenic 15.0%
!!! AATTGTTCTTTTCTAAAATA+AGG + chr2_4:18189365-18189384 Msa0318980:intron 15.0%
!!! ATTGTTCTTTTCTAAAATAA+GGG + chr2_4:18189366-18189385 Msa0318980:intron 15.0%
!!! ATACATAAAACTAACTTTTT+TGG - chr2_4:18190241-18190260 None:intergenic 15.0%
!!! ATTGTTGATTTTTTTTGCAT+CGG - chr2_4:18181058-18181077 None:intergenic 20.0%
!! AAAAAATCAACAATAAACCA+TGG + chr2_4:18181064-18181083 Msa0318980:five_prime_UTR 20.0%
!! CATAGATTTCAAATTTCAAT+CGG - chr2_4:18181200-18181219 None:intergenic 20.0%
!!! AGTATTTTTTGTTTGAATTC+TGG + chr2_4:18181837-18181856 Msa0318980:intron 20.0%
!! TTGAATAAAATTACACATGT+TGG + chr2_4:18182081-18182100 Msa0318980:intron 20.0%
!!! ACTTTCAATTTGGAATATTA+TGG + chr2_4:18182148-18182167 Msa0318980:intron 20.0%
!! TTGATATATTTGAATGTTTG+TGG + chr2_4:18182598-18182617 Msa0318980:intron 20.0%
!! GAAAAAGAAAAATAAAAAGG+GGG - chr2_4:18182640-18182659 None:intergenic 20.0%
!! GGAAAAAGAAAAATAAAAAG+GGG - chr2_4:18182641-18182660 None:intergenic 20.0%
!! GAGGAAAAAGAAAAATAAAA+AGG - chr2_4:18182643-18182662 None:intergenic 20.0%
!!! GAATAAAATCAAGCTTTAAA+CGG - chr2_4:18183654-18183673 None:intergenic 20.0%
!! ACTGTAAAATGTAAATAGTT+CGG - chr2_4:18183764-18183783 None:intergenic 20.0%
!! AAGTTTAATATTGATATGCA+TGG + chr2_4:18183867-18183886 Msa0318980:intron 20.0%
!! GTTATTATACAATCTAAAAG+AGG + chr2_4:18183928-18183947 Msa0318980:intron 20.0%
!!! AACACATGAATAGTAATTTT+AGG + chr2_4:18184044-18184063 Msa0318980:intron 20.0%
!! GAAATAAGTCAAACAATAAA+GGG - chr2_4:18184366-18184385 None:intergenic 20.0%
!! TGAAATAAGTCAAACAATAA+AGG - chr2_4:18184367-18184386 None:intergenic 20.0%
!!! TCATTCTTTGGAAAATTTAA+GGG + chr2_4:18185723-18185742 Msa0318980:CDS 20.0%
!!! TCATTTTCTCAAATTATTAC+CGG + chr2_4:18186131-18186150 Msa0318980:intron 20.0%
!!! TCATTTTCTCAAATTATTAC+CGG + chr2_4:18186131-18186150 Msa0318980:intron 20.0%
!!! AAACTAAACTTAATTTGGAA+CGG - chr2_4:18186755-18186774 None:intergenic 20.0%
!! TACGAAAACTAAACTTAATT+TGG - chr2_4:18186760-18186779 None:intergenic 20.0%
!!! TATTAACTATAGGTAACTTT+TGG + chr2_4:18187169-18187188 Msa0318980:intron 20.0%
!!! ATTAACTATAGGTAACTTTT+GGG + chr2_4:18187170-18187189 Msa0318980:intron 20.0%
!! TTTAGAAAAAATTTCATTGC+TGG + chr2_4:18187267-18187286 Msa0318980:CDS 20.0%
!! TTAGAAAAAATTTCATTGCT+GGG + chr2_4:18187268-18187287 Msa0318980:CDS 20.0%
!! CATTATTATAATTGTCTGAA+AGG - chr2_4:18187867-18187886 None:intergenic 20.0%
!! CTTTCAGACAATTATAATAA+TGG + chr2_4:18187865-18187884 Msa0318980:CDS 20.0%
!! ATTTCATATTTCAGAATGAT+AGG - chr2_4:18188246-18188265 None:intergenic 20.0%
!!! ACAAAAATCTATTGACTTAT+TGG + chr2_4:18188309-18188328 Msa0318980:intron 20.0%
!! TTGTAACAAAATTACTTTCT+TGG + chr2_4:18188376-18188395 Msa0318980:intron 20.0%
!!! CAATTGTTTTTTTTTTTGAG+GGG + chr2_4:18188521-18188540 Msa0318980:intron 20.0%
!!! AATTGTTTTTTTTTTTGAGG+GGG + chr2_4:18188522-18188541 Msa0318980:intron 20.0%
!! AGTAGAAGAATAAAAGAAAA+GGG - chr2_4:18188615-18188634 None:intergenic 20.0%
!! TAAGAGAAAACTATATGATT+AGG - chr2_4:18188807-18188826 None:intergenic 20.0%
!! ACACTATTATTATCAAACAA+AGG - chr2_4:18188960-18188979 None:intergenic 20.0%
!!! AACAACATTTTTGGAATAAT+TGG + chr2_4:18189114-18189133 Msa0318980:intron 20.0%
!! GTTATGTTAATGTTAATATG+AGG + chr2_4:18189233-18189252 Msa0318980:intron 20.0%
!! ACATAATTAAATAAAGTCCT+GGG - chr2_4:18189516-18189535 None:intergenic 20.0%
!! AACATAATTAAATAAAGTCC+TGG - chr2_4:18189517-18189536 None:intergenic 20.0%
!! GATAAAAAAAAAGAAACAGA+TGG - chr2_4:18189694-18189713 None:intergenic 20.0%
!!! CATCAAAAAAATTTGCTTTA+CGG + chr2_4:18190012-18190031 Msa0318980:CDS 20.0%
!!! AAATTTTGGATACTATGTTA+GGG + chr2_4:18190188-18190207 Msa0318980:three_prime_UTR 20.0%
!!! TAGTTTTATGTATGTAAGTT+TGG + chr2_4:18190248-18190267 Msa0318980:three_prime_UTR 20.0%
!! TATCAATTTACTATCCAAAA+TGG + chr2_4:18190289-18190308 Msa0318980:three_prime_UTR 20.0%
! AATCTAGAAGAAATAAAGAG+AGG - chr2_4:18181157-18181176 None:intergenic 25.0%
! TGTTAAATTACTTGAACGAA+AGG + chr2_4:18181308-18181327 Msa0318980:five_prime_UTR 25.0%
! GAAAATGCTAATCTCAAAAA+AGG + chr2_4:18181348-18181367 Msa0318980:five_prime_UTR 25.0%
! ATAGCTTCTGCAAATAAATA+AGG - chr2_4:18181650-18181669 None:intergenic 25.0%
! TTTAATAAGCTCAATCCAAA+CGG + chr2_4:18181671-18181690 Msa0318980:intron 25.0%
!!! ATTCCAAATTGAAAGTGTTT+CGG - chr2_4:18182144-18182163 None:intergenic 25.0%
! TGATACTCAAAGTAAAATGA+CGG + chr2_4:18182191-18182210 Msa0318980:intron 25.0%
! AATAATGCTTTACTTGACTT+AGG + chr2_4:18182368-18182387 Msa0318980:intron 25.0%
!! TGCAAGAAAAATCTAAGATA+CGG - chr2_4:18182419-18182438 None:intergenic 25.0%
! ACATGATAGAAAATTGCATA+TGG + chr2_4:18182536-18182555 Msa0318980:intron 25.0%
! TACTGAAACAAAAATGAAGT+TGG + chr2_4:18183117-18183136 Msa0318980:five_prime_UTR 25.0%
! TCACTATTAACATTGAAAGA+CGG - chr2_4:18183901-18183920 None:intergenic 25.0%
! ATTTCTGATGTGTGAAATAA+AGG - chr2_4:18183980-18183999 None:intergenic 25.0%
!! AGTAAAGGTATGTAGATAAA+AGG + chr2_4:18184272-18184291 Msa0318980:five_prime_UTR 25.0%
!! GTAAAGGTATGTAGATAAAA+GGG + chr2_4:18184273-18184292 Msa0318980:five_prime_UTR 25.0%
!! TAAAGGTATGTAGATAAAAG+GGG + chr2_4:18184274-18184293 Msa0318980:five_prime_UTR 25.0%
! GACTTATTTCAATATGTTAG+TGG + chr2_4:18184376-18184395 Msa0318980:five_prime_UTR 25.0%
!!! TCTCTTTTTCATTGAATATG+TGG + chr2_4:18184426-18184445 Msa0318980:five_prime_UTR 25.0%
!! TTTTTCATTGAATATGTGGA+TGG + chr2_4:18184430-18184449 Msa0318980:five_prime_UTR 25.0%
! GTGAAGATAGAAATTGTAAA+AGG + chr2_4:18184456-18184475 Msa0318980:five_prime_UTR 25.0%
! GATAGAAATTGTAAAAGGTT+AGG + chr2_4:18184461-18184480 Msa0318980:intron 25.0%
! AGATTTCTTTCTCTTCTTAT+GGG - chr2_4:18185218-18185237 None:intergenic 25.0%
! TATTTCATCAAAGTTGTTTG+AGG - chr2_4:18185395-18185414 None:intergenic 25.0%
!! AACATTTGCTTTGGATAATA+TGG + chr2_4:18185525-18185544 Msa0318980:CDS 25.0%
!! CTCATTCTTTGGAAAATTTA+AGG + chr2_4:18185722-18185741 Msa0318980:CDS 25.0%
! AAATTTAAGGGATACATTTC+TGG + chr2_4:18185735-18185754 Msa0318980:CDS 25.0%
!!! TAATTTTGGTCTCATAGTAT+CGG + chr2_4:18185795-18185814 Msa0318980:CDS 25.0%
!!! AACAACATCTTACTTTTGTA+TGG - chr2_4:18185953-18185972 None:intergenic 25.0%
! TCTTTACTACTTTACATCAA+AGG + chr2_4:18186047-18186066 Msa0318980:intron 25.0%
! TCTTTACTACTTTACATCAA+AGG + chr2_4:18186047-18186066 Msa0318980:intron 25.0%
!!! TTTTTTATGATGGCAAATGA+TGG + chr2_4:18186512-18186531 Msa0318980:intron 25.0%
! GTATTAATTGGTGTAGAATT+GGG - chr2_4:18186844-18186863 None:intergenic 25.0%
! AGTATTAATTGGTGTAGAAT+TGG - chr2_4:18186845-18186864 None:intergenic 25.0%
! TACTTTGCATGAAAAAAACA+TGG + chr2_4:18186988-18187007 Msa0318980:intron 25.0%
! ACTTTGCATGAAAAAAACAT+GGG + chr2_4:18186989-18187008 Msa0318980:intron 25.0%
! TAGAAAAAATTTCATTGCTG+GGG + chr2_4:18187269-18187288 Msa0318980:CDS 25.0%
! CTAAAAGAAAGTCTTCAATA+AGG - chr2_4:18187303-18187322 None:intergenic 25.0%
!! ATTGAAGACTTTCTTTTAGA+AGG + chr2_4:18187304-18187323 Msa0318980:CDS 25.0%
!!! TTATATTGGGTTTATTTCTG+AGG + chr2_4:18187492-18187511 Msa0318980:CDS 25.0%
! AGGCATCATATAATATTCTT+AGG + chr2_4:18187512-18187531 Msa0318980:CDS 25.0%
!! AAAAGATAACTTTAGAAGCA+AGG - chr2_4:18187981-18188000 None:intergenic 25.0%
! TGTTATGATTAGAAAATGCA+TGG + chr2_4:18188337-18188356 Msa0318980:intron 25.0%
! GAGCAACAAATTTCAATAAA+AGG - chr2_4:18188404-18188423 None:intergenic 25.0%
! ATTGAAACTAGCTAATTCAA+GGG + chr2_4:18188435-18188454 Msa0318980:intron 25.0%
!! TTCATTTAAAATTGTGTCCA+TGG + chr2_4:18188489-18188508 Msa0318980:intron 25.0%
! GTAGAAGAATAAAAGAAAAG+GGG - chr2_4:18188614-18188633 None:intergenic 25.0%
! CAGTAGAAGAATAAAAGAAA+AGG - chr2_4:18188616-18188635 None:intergenic 25.0%
! ATTAAGTCAGAGAATTTACA+AGG - chr2_4:18188662-18188681 None:intergenic 25.0%
! AAAACTATATGATTAGGCTT+AGG - chr2_4:18188801-18188820 None:intergenic 25.0%
! AAAAGTAGCCTATAAACAAT+AGG - chr2_4:18189014-18189033 None:intergenic 25.0%
! AATTATGTTTGAATCTCTAC+TGG + chr2_4:18189528-18189547 Msa0318980:intron 25.0%
! ATTATGTTTGAATCTCTACT+GGG + chr2_4:18189529-18189548 Msa0318980:intron 25.0%
! TTATGAGAGGTTAATGTAAA+AGG - chr2_4:18189621-18189640 None:intergenic 25.0%
! TCATCAGAAATAGATTTACT+AGG - chr2_4:18189952-18189971 None:intergenic 25.0%
! AAAACTAACTGTACAGATTA+TGG + chr2_4:18190117-18190136 Msa0318980:three_prime_UTR 25.0%
! AAACTAACTGTACAGATTAT+GGG + chr2_4:18190118-18190137 Msa0318980:three_prime_UTR 25.0%
!! CAAATTTTGGATACTATGTT+AGG + chr2_4:18190187-18190206 Msa0318980:three_prime_UTR 25.0%
!!! ACTTTTTTGGAAGATAACTA+GGG - chr2_4:18190228-18190247 None:intergenic 25.0%
!!! AACTTTTTTGGAAGATAACT+AGG - chr2_4:18190229-18190248 None:intergenic 25.0%
!! AATTAAGATAAACGCCATTT+TGG - chr2_4:18190306-18190325 None:intergenic 25.0%
AAACAGTAAAAAACAAACCC+TGG + chr2_4:18180841-18180860 Msa0318980:five_prime_UTR 30.0%
AACAGTAAAAAACAAACCCT+GGG + chr2_4:18180842-18180861 Msa0318980:five_prime_UTR 30.0%
AATAAAAACCAAATCACCCA+GGG - chr2_4:18180861-18180880 None:intergenic 30.0%
!!! TTTTTTGCATCGGAGATTTA+GGG - chr2_4:18181048-18181067 None:intergenic 30.0%
!!! TTTTTTTGCATCGGAGATTT+AGG - chr2_4:18181049-18181068 None:intergenic 30.0%
AAATCAACAATAAACCATGG+CGG + chr2_4:18181067-18181086 Msa0318980:five_prime_UTR 30.0%
ATTTCGTGATTCTTGAAACT+TGG - chr2_4:18181274-18181293 None:intergenic 30.0%
TAAAATAAGCCAATCCAAAC+GGG - chr2_4:18181489-18181508 None:intergenic 30.0%
CTAAAATAAGCCAATCCAAA+CGG - chr2_4:18181490-18181509 None:intergenic 30.0%
TTAATAAGCTCAATCCAAAC+GGG + chr2_4:18181672-18181691 Msa0318980:intron 30.0%
TCAAATTATCACTAGTAGTG+AGG - chr2_4:18182047-18182066 None:intergenic 30.0%
TCACTACTAGTGATAATTTG+AGG + chr2_4:18182046-18182065 Msa0318980:intron 30.0%
!! TTCCAAATTGAAAGTGTTTC+GGG - chr2_4:18182143-18182162 None:intergenic 30.0%
! TTTGGAATATTATGGTGACT+TGG + chr2_4:18182156-18182175 Msa0318980:intron 30.0%
! ATGTCTAACTATGTTTGTTG+AGG + chr2_4:18182286-18182305 Msa0318980:intron 30.0%
AAACTACAAGTTACAGAGTT+TGG - chr2_4:18182700-18182719 None:intergenic 30.0%
TCTTAAAGAACTCAATGCTA+AGG + chr2_4:18182772-18182791 Msa0318980:five_prime_UTR 30.0%
TTTGAAAGCCGATTATGATA+GGG + chr2_4:18182895-18182914 Msa0318980:five_prime_UTR 30.0%
TTCCTTATCCCTATCATAAT+CGG - chr2_4:18182906-18182925 None:intergenic 30.0%
TGAAAGATTGAAGAAACTTG+TGG + chr2_4:18182928-18182947 Msa0318980:five_prime_UTR 30.0%
TTGTGGAGAAAGAAAAGAAA+AGG + chr2_4:18182945-18182964 Msa0318980:five_prime_UTR 30.0%
TGTGGAGAAAGAAAAGAAAA+GGG + chr2_4:18182946-18182965 Msa0318980:five_prime_UTR 30.0%
AGCTAGTAAGTTATTGGATA+AGG + chr2_4:18183018-18183037 Msa0318980:five_prime_UTR 30.0%
GCTAGTAAGTTATTGGATAA+GGG + chr2_4:18183019-18183038 Msa0318980:five_prime_UTR 30.0%
CTAGTAAGTTATTGGATAAG+GGG + chr2_4:18183020-18183039 Msa0318980:five_prime_UTR 30.0%
! GATATTTCATTGGGTTTTCT+TGG - chr2_4:18183442-18183461 None:intergenic 30.0%
AGAAAACCCAATGAAATATC+TGG + chr2_4:18183442-18183461 Msa0318980:five_prime_UTR 30.0%
GATACTCCAGATATTTCATT+GGG - chr2_4:18183451-18183470 None:intergenic 30.0%
AGATACTCCAGATATTTCAT+TGG - chr2_4:18183452-18183471 None:intergenic 30.0%
GGGAAAAGTTAAAACATGAA+AGG + chr2_4:18183554-18183573 Msa0318980:five_prime_UTR 30.0%
AAAATGTAAATAGTTCGGCA+AGG - chr2_4:18183759-18183778 None:intergenic 30.0%
TCCTGGTAAAACTTATTTGT+TGG + chr2_4:18184102-18184121 Msa0318980:five_prime_UTR 30.0%
! TCCAACAAATAAGTTTTACC+AGG - chr2_4:18184106-18184125 None:intergenic 30.0%
! CTTTTGCACACGTTAATTTT+TGG + chr2_4:18184181-18184200 Msa0318980:five_prime_UTR 30.0%
!!! TTTTGGCTTGTAGTTTTTTG+TGG + chr2_4:18184198-18184217 Msa0318980:five_prime_UTR 30.0%
AATTGATCAGACATATGTAC+AGG - chr2_4:18184539-18184558 None:intergenic 30.0%
TTAGAACCAATACCTGTAAT+GGG - chr2_4:18184785-18184804 None:intergenic 30.0%
! TTTAGAACCAATACCTGTAA+TGG - chr2_4:18184786-18184805 None:intergenic 30.0%
!! TACAGGTATTGGTTCTAAAT+TGG + chr2_4:18184787-18184806 Msa0318980:CDS 30.0%
! TTATTGGTCATGATGGAATA+AGG + chr2_4:18185002-18185021 Msa0318980:CDS 30.0%
GATTTCTTTCTCTTCTTATG+GGG - chr2_4:18185217-18185236 None:intergenic 30.0%
GAGATTTCTTTCTCTTCTTA+TGG - chr2_4:18185219-18185238 None:intergenic 30.0%
AGAAGAGAAAGAAATCTCAT+AGG + chr2_4:18185221-18185240 Msa0318980:CDS 30.0%
GAAGAGAAAGAAATCTCATA+GGG + chr2_4:18185222-18185241 Msa0318980:CDS 30.0%
ATTATATGCTCAAACTACTC+AGG + chr2_4:18185345-18185364 Msa0318980:CDS 30.0%
! TGAAGAACTTCATTCTGAAA+AGG - chr2_4:18185553-18185572 None:intergenic 30.0%
AATTCCTTGTAATGAACACA+GGG + chr2_4:18185660-18185679 Msa0318980:CDS 30.0%
GATACTATGAGACCAAAATT+AGG - chr2_4:18185796-18185815 None:intergenic 30.0%
AGGATAATAGTTGCATATCT+AGG + chr2_4:18185824-18185843 Msa0318980:CDS 30.0%
AGTAAAGATGTTTCAAAGCA+TGG - chr2_4:18185998-18186017 None:intergenic 30.0%
TTGAATGTAACAACATGCTT+TGG - chr2_4:18186106-18186125 None:intergenic 30.0%
AGTAAAGATGTTTCAAAGCA+TGG - chr2_4:18185998-18186017 None:intergenic 30.0%
TTGAATGTAACAACATGCTT+TGG - chr2_4:18186106-18186125 None:intergenic 30.0%
! TAAACTTAATTTGGAACGGA+GGG - chr2_4:18186751-18186770 None:intergenic 30.0%
! GTGGTTCACAAAGTATTAAT+TGG - chr2_4:18186856-18186875 None:intergenic 30.0%
! ACATGGGACAACATTTATTT+TGG + chr2_4:18187005-18187024 Msa0318980:intron 30.0%
!!! GGACAACATTTATTTTGGAA+CGG + chr2_4:18187010-18187029 Msa0318980:intron 30.0%
!!! ATTTATTTTGGAACGGAGAA+AGG + chr2_4:18187017-18187036 Msa0318980:intron 30.0%
!!! TTTATTTTGGAACGGAGAAA+GGG + chr2_4:18187018-18187037 Msa0318980:intron 30.0%
TTACTAACACAACTACAATC+TGG - chr2_4:18187077-18187096 None:intergenic 30.0%
TTGTAGTTGTGTTAGTAAGT+TGG + chr2_4:18187079-18187098 Msa0318980:intron 30.0%
AAAGAAAGTCTTCAATAAGG+CGG - chr2_4:18187300-18187319 None:intergenic 30.0%
TCTCAAATTACTATCAGATG+AGG - chr2_4:18187365-18187384 None:intergenic 30.0%
! TTTGAGAAACGATAGTTTTC+TGG + chr2_4:18187378-18187397 Msa0318980:CDS 30.0%
! TCTTCACATTTTTGCTAATC+TGG + chr2_4:18187570-18187589 Msa0318980:CDS 30.0%
! CTTCACATTTTTGCTAATCT+GGG + chr2_4:18187571-18187590 Msa0318980:CDS 30.0%
!!! TATTTTAACTCGTGCAGTTA+TGG + chr2_4:18187604-18187623 Msa0318980:CDS 30.0%
! AAATGACATTAGTCTACTTC+TGG + chr2_4:18188016-18188035 Msa0318980:intron 30.0%
GATAAGTTAATTTCGAAACC+TGG + chr2_4:18188198-18188217 Msa0318980:intron 30.0%
! TTTTGTCATCGTCATTGATA+TGG - chr2_4:18188295-18188314 None:intergenic 30.0%
CATTGAAACTAGCTAATTCA+AGG + chr2_4:18188434-18188453 Msa0318980:intron 30.0%
AGGATAAGTCTTTAGATACT+CGG + chr2_4:18188560-18188579 Msa0318980:intron 30.0%
AATAAAAGAAAAGGGGTTTG+AGG - chr2_4:18188607-18188626 None:intergenic 30.0%
TTTATTCTTCTACTGTGAGA+AGG + chr2_4:18188621-18188640 Msa0318980:intron 30.0%
!!! TTTCTCTTATTTTTCAGAGC+TGG + chr2_4:18188818-18188837 Msa0318980:intron 30.0%
TCTTCCTACCTATTGTTTAT+AGG + chr2_4:18189003-18189022 Msa0318980:intron 30.0%
!!! CTACTTTTTCATGTACTGTA+AGG + chr2_4:18189026-18189045 Msa0318980:intron 30.0%
TCATACAACAAGATTGTGTA+TGG + chr2_4:18189195-18189214 Msa0318980:intron 30.0%
CATACAACAAGATTGTGTAT+GGG + chr2_4:18189196-18189215 Msa0318980:intron 30.0%
CGAGGACCTATAAATATAAT+AGG + chr2_4:18189273-18189292 Msa0318980:intron 30.0%
CGGAGTCCTATTATATTTAT+AGG - chr2_4:18189282-18189301 None:intergenic 30.0%
ATTAAATAAAGTCCTGGGAT+GGG - chr2_4:18189511-18189530 None:intergenic 30.0%
AATTAAATAAAGTCCTGGGA+TGG - chr2_4:18189512-18189531 None:intergenic 30.0%
! TATTGTACGACATCTTTTCT+TGG + chr2_4:18189574-18189593 Msa0318980:intron 30.0%
AAAGAAGAAACAGTTATGAG+AGG - chr2_4:18189634-18189653 None:intergenic 30.0%
! TTGTCTTGTTCACATATATG+TGG - chr2_4:18189663-18189682 None:intergenic 30.0%
! GTTGAATATTGTTACTTACC+AGG + chr2_4:18189734-18189753 Msa0318980:intron 30.0%
ATTCTAAATCAAGAGGAAGA+AGG - chr2_4:18189894-18189913 None:intergenic 30.0%
GAAAGTGATTCTAAATCAAG+AGG - chr2_4:18189901-18189920 None:intergenic 30.0%
! GTCTAAAATGATCATTCAGT+GGG - chr2_4:18190048-18190067 None:intergenic 30.0%
! TTTGTTATCATTCTTCATCG+AGG + chr2_4:18190083-18190102 Msa0318980:three_prime_UTR 30.0%
TGTACAGATTATGGGAAATT+AGG + chr2_4:18190126-18190145 Msa0318980:three_prime_UTR 30.0%
GAATAAAAACCAAATCACCC+AGG - chr2_4:18180862-18180881 None:intergenic 35.0%
AAACCCTCTATCACTTTCAA+TGG - chr2_4:18180919-18180938 None:intergenic 35.0%
TTGAAAGTGATAGAGGGTTT+AGG + chr2_4:18180919-18180938 Msa0318980:five_prime_UTR 35.0%
TGAAAGTGATAGAGGGTTTA+GGG + chr2_4:18180920-18180939 Msa0318980:five_prime_UTR 35.0%
GAAGAAAAGAAGAGTCAAGA+AGG - chr2_4:18180991-18181010 None:intergenic 35.0%
! CAGTGATTTTCAGATTCAGA+AGG - chr2_4:18181110-18181129 None:intergenic 35.0%
ATCGGTGAAAATGAAAGCAA+TGG - chr2_4:18181182-18181201 None:intergenic 35.0%
TAATAAGCTCAATCCAAACG+GGG + chr2_4:18181673-18181692 Msa0318980:intron 35.0%
CACACACTACACATAACTTT+AGG - chr2_4:18181699-18181718 None:intergenic 35.0%
GTGTTCAATGTTACATGTGT+CGG + chr2_4:18182114-18182133 Msa0318980:intron 35.0%
ATCGCTAAAGACTTGAATTG+AGG - chr2_4:18182268-18182287 None:intergenic 35.0%
CTTTACTTGACTTAGGTGAT+AGG + chr2_4:18182375-18182394 Msa0318980:intron 35.0%
TTTCTTGCAATACTCTGAGT+TGG + chr2_4:18182430-18182449 Msa0318980:intron 35.0%
AGGACACACTGATAATATGA+AGG + chr2_4:18182470-18182489 Msa0318980:intron 35.0%
CACAAATATTGTTGCAGTTG+TGG + chr2_4:18182504-18182523 Msa0318980:intron 35.0%
!! AAATAAAAAGGGGGCATCAA+GGG - chr2_4:18182631-18182650 None:intergenic 35.0%
!! AAAATAAAAAGGGGGCATCA+AGG - chr2_4:18182632-18182651 None:intergenic 35.0%
GAGAGCGAAAATTGAAAAAG+AGG + chr2_4:18182745-18182764 Msa0318980:five_prime_UTR 35.0%
! TGCAGTGATCTCAGATTTTA+AGG - chr2_4:18182822-18182841 None:intergenic 35.0%
! CTTTGAAAGCCGATTATGAT+AGG + chr2_4:18182894-18182913 Msa0318980:five_prime_UTR 35.0%
! AGCCTTCTTTTTCTCATTCA+CGG - chr2_4:18182993-18183012 None:intergenic 35.0%
TGCTGAAGCTAGTAAGTTAT+TGG + chr2_4:18183012-18183031 Msa0318980:five_prime_UTR 35.0%
TGAGTTGTCAAAGTTTGAAG+AGG + chr2_4:18183144-18183163 Msa0318980:five_prime_UTR 35.0%
TGAAAAACAGAAGCTCTTAG+TGG + chr2_4:18183186-18183205 Msa0318980:five_prime_UTR 35.0%
TTGAAAAACAAAAGGCTGCT+AGG + chr2_4:18183260-18183279 Msa0318980:five_prime_UTR 35.0%
TGAAAAACAAAAGGCTGCTA+GGG + chr2_4:18183261-18183280 Msa0318980:five_prime_UTR 35.0%
CAAAACATCTTGCTTATCAG+AGG + chr2_4:18183347-18183366 Msa0318980:five_prime_UTR 35.0%
GGAGTTATTGAAGGATAAGA+AGG + chr2_4:18183375-18183394 Msa0318980:five_prime_UTR 35.0%
GAAGGATAAGAAGGTAATTG+AGG + chr2_4:18183384-18183403 Msa0318980:five_prime_UTR 35.0%
TCACTTTCAGCATTCACATT+AGG - chr2_4:18183475-18183494 None:intergenic 35.0%
CTACAATCACCTTAATATGC+TGG + chr2_4:18183678-18183697 Msa0318980:five_prime_UTR 35.0%
TTGAAAACCTATATGTGCCA+TGG - chr2_4:18183834-18183853 None:intergenic 35.0%
TTAGGATGACAGCATTTGAT+TGG + chr2_4:18184062-18184081 Msa0318980:intron 35.0%
CCTTTACTTATAGAGAAAGC+TGG - chr2_4:18184260-18184279 None:intergenic 35.0%
CCAGCTTTCTCTATAAGTAA+AGG + chr2_4:18184257-18184276 Msa0318980:five_prime_UTR 35.0%
! TCTGATCAATTTTTGTCTGC+TGG + chr2_4:18184548-18184567 Msa0318980:intron 35.0%
! TTTTTGTCTGCTGGATGATT+TGG + chr2_4:18184557-18184576 Msa0318980:intron 35.0%
! CACTTCTTGCTATATCTGAA+GGG + chr2_4:18184747-18184766 Msa0318980:CDS 35.0%
AATTATACCGAACCCATTAC+AGG + chr2_4:18184770-18184789 Msa0318980:CDS 35.0%
! TTTTTCTGATGCACACTTGA+TGG + chr2_4:18184877-18184896 Msa0318980:CDS 35.0%
! TTTTCTGATGCACACTTGAT+GGG + chr2_4:18184878-18184897 Msa0318980:CDS 35.0%
AGATCAGTTATTGGTCATGA+TGG + chr2_4:18184995-18185014 Msa0318980:CDS 35.0%
! GTCATGATGGAATAAGGAAT+AGG + chr2_4:18185008-18185027 Msa0318980:CDS 35.0%
TGTTGCAAATTTGTCTTCTG+AGG + chr2_4:18185051-18185070 Msa0318980:CDS 35.0%
GTTGCAAATTTGTCTTCTGA+GGG + chr2_4:18185052-18185071 Msa0318980:CDS 35.0%
AAAATGAACGAATCCGTTGA+AGG + chr2_4:18185136-18185155 Msa0318980:CDS 35.0%
AGAGATGGTTACTAATCAGA+GGG + chr2_4:18185165-18185184 Msa0318980:CDS 35.0%
AAATCTCATAGGGAAAAAGC+AGG + chr2_4:18185232-18185251 Msa0318980:CDS 35.0%
GTAGTTTGAGCATATAATGC+AGG - chr2_4:18185343-18185362 None:intergenic 35.0%
CTTAGAAAATGCTGTTGATG+AGG + chr2_4:18185444-18185463 Msa0318980:CDS 35.0%
GGAAAATATAGTGGTGACAA+GGG - chr2_4:18185496-18185515 None:intergenic 35.0%
AAAGCAAATGTTTCAGTCTC+GGG - chr2_4:18185517-18185536 None:intergenic 35.0%
CAAAGCAAATGTTTCAGTCT+CGG - chr2_4:18185518-18185537 None:intergenic 35.0%
TTGAAGGAGATGAATCTCTT+TGG - chr2_4:18185591-18185610 None:intergenic 35.0%
ATGACATCACATCTAGTTGA+AGG - chr2_4:18185607-18185626 None:intergenic 35.0%
AGGAATTGCAAATGCATCAT+TGG - chr2_4:18185647-18185666 None:intergenic 35.0%
CAATTCCTTGTAATGAACAC+AGG + chr2_4:18185659-18185678 Msa0318980:CDS 35.0%
! TTTAAGGGATACATTTCTGG+TGG + chr2_4:18185738-18185757 Msa0318980:CDS 35.0%
! CAGCATCAACTTCCTAATTT+TGG + chr2_4:18185781-18185800 Msa0318980:CDS 35.0%
TTTGGATACTCAAACTGGAT+GGG + chr2_4:18185885-18185904 Msa0318980:CDS 35.0%
TCTCAAATTATTACCGGTGT+CGG + chr2_4:18186137-18186156 Msa0318980:intron 35.0%
TCTCAAATTATTACCGGTGT+CGG + chr2_4:18186137-18186156 Msa0318980:intron 35.0%
! CTAAACTTAATTTGGAACGG+AGG - chr2_4:18186752-18186771 None:intergenic 35.0%
AATTGGTGTAGAATTGGGAA+AGG - chr2_4:18186839-18186858 None:intergenic 35.0%
CCATTGTCATAAATGTGTAG+TGG - chr2_4:18186896-18186915 None:intergenic 35.0%
CCACTACACATTTATGACAA+TGG + chr2_4:18186893-18186912 Msa0318980:intron 35.0%
GTTAAAACCTGTTACATCGA+TGG + chr2_4:18187133-18187152 Msa0318980:intron 35.0%
! AGAAACGATAGTTTTCTGGA+TGG + chr2_4:18187382-18187401 Msa0318980:CDS 35.0%
TGTGCTGCAACTGATTATAT+TGG + chr2_4:18187478-18187497 Msa0318980:CDS 35.0%
GTGCTGCAACTGATTATATT+GGG + chr2_4:18187479-18187498 Msa0318980:CDS 35.0%
ATCTCTAGTCATGTTTCTTG+AGG + chr2_4:18187648-18187667 Msa0318980:CDS 35.0%
TCTCTAGTCATGTTTCTTGA+GGG + chr2_4:18187649-18187668 Msa0318980:CDS 35.0%
! TGTAACAACATCAATGGACT+CGG - chr2_4:18187770-18187789 None:intergenic 35.0%
CAACGATGTAACAACATCAA+TGG - chr2_4:18187776-18187795 None:intergenic 35.0%
AACTGTTGTTCTTGCTGAAA+TGG - chr2_4:18187823-18187842 None:intergenic 35.0%
AAAAGAATAACCTTGCTGCT+GGG - chr2_4:18188051-18188070 None:intergenic 35.0%
AAAAAGAATAACCTTGCTGC+TGG - chr2_4:18188052-18188071 None:intergenic 35.0%
! AGCAGCAAGGTTATTCTTTT+TGG + chr2_4:18188051-18188070 Msa0318980:intron 35.0%
AATATCTTAGACTTAGAGCC+AGG - chr2_4:18188219-18188238 None:intergenic 35.0%
! AACAATTGAAAGCACAACCA+TGG - chr2_4:18188509-18188528 None:intergenic 35.0%
GAGTATCTAAAGACTTATCC+TGG - chr2_4:18188561-18188580 None:intergenic 35.0%
GGTGAGACTATCAAATAAGA+AGG - chr2_4:18188586-18188605 None:intergenic 35.0%
GTTGCTATCATTGTTCTTCT+TGG + chr2_4:18188913-18188932 Msa0318980:CDS 35.0%
GTAGCCTATAAACAATAGGT+AGG - chr2_4:18189010-18189029 None:intergenic 35.0%
!!! TCCCTTTGGAACAACATTTT+TGG + chr2_4:18189057-18189076 Msa0318980:intron 35.0%
CCCAAAAATGTTGTTCCAAA+GGG - chr2_4:18189061-18189080 None:intergenic 35.0%
!!! CCCTTTGGAACAACATTTTT+GGG + chr2_4:18189058-18189077 Msa0318980:intron 35.0%
ACCCAAAAATGTTGTTCCAA+AGG - chr2_4:18189062-18189081 None:intergenic 35.0%
!!! TTTTGGGTTCATGTACTGTA+AGG + chr2_4:18189074-18189093 Msa0318980:intron 35.0%
TCCAAAAATGTTGTTCCAGA+GGG - chr2_4:18189109-18189128 None:intergenic 35.0%
TTCCAAAAATGTTGTTCCAG+AGG - chr2_4:18189110-18189129 None:intergenic 35.0%
!!! TACTCTGGAACAGTTTTGTA+TGG + chr2_4:18189163-18189182 Msa0318980:intron 35.0%
TAATAGGACTCCGATGAAAT+AGG + chr2_4:18189289-18189308 Msa0318980:intron 35.0%
! GACTTCACTTGTTAAAGTCT+TGG + chr2_4:18189424-18189443 Msa0318980:intron 35.0%
TTAAATAAAGTCCTGGGATG+GGG - chr2_4:18189510-18189529 None:intergenic 35.0%
! ACATCTTTTCTTGGAAGCTT+TGG + chr2_4:18189583-18189602 Msa0318980:intron 35.0%
! ATATTGTTACTTACCAGGCT+TGG + chr2_4:18189739-18189758 Msa0318980:intron 35.0%
ATCTCAAATTCTCAACTCCA+TGG - chr2_4:18189789-18189808 None:intergenic 35.0%
!! AAATCTATTTCTGATGACGC+TGG + chr2_4:18189955-18189974 Msa0318980:CDS 35.0%
! AGTTTAAGGAAGTGGTTTTC+TGG + chr2_4:18189979-18189998 Msa0318980:CDS 35.0%
! GTTTAAGGAAGTGGTTTTCT+GGG + chr2_4:18189980-18189999 Msa0318980:CDS 35.0%
! CGTCTAAAATGATCATTCAG+TGG - chr2_4:18190049-18190068 None:intergenic 35.0%
ACAGATTATGGGAAATTAGG+CGG + chr2_4:18190129-18190148 Msa0318980:three_prime_UTR 35.0%
!!! GTTGAGAGCTTTTGAGATAT+GGG + chr2_4:18190151-18190170 Msa0318980:three_prime_UTR 35.0%
! CTGATGTTGCTCTCAAATTT+TGG + chr2_4:18190174-18190193 Msa0318980:three_prime_UTR 35.0%
TTGTTCAGTTCAGCAATTTC+AGG + chr2_4:18190324-18190343 Msa0318980:three_prime_UTR 35.0%
AAAACAAACCCTGGGTGATT+TGG + chr2_4:18180850-18180869 Msa0318980:five_prime_UTR 40.0%
TCGTCCATTGAAAGTGATAG+AGG + chr2_4:18180912-18180931 Msa0318980:five_prime_UTR 40.0%
CGTCCATTGAAAGTGATAGA+GGG + chr2_4:18180913-18180932 Msa0318980:five_prime_UTR 40.0%
CATACATGTGCATATGAGAG+AGG - chr2_4:18180966-18180985 None:intergenic 40.0%
! TTATTGATTAAGGGCCCGTT+TGG + chr2_4:18181472-18181491 Msa0318980:intron 40.0%
! CTGTATCGGTGCTTAATACA+AGG - chr2_4:18181736-18181755 None:intergenic 40.0%
!! ATTAAGCACCGATACAGACA+CGG + chr2_4:18181739-18181758 Msa0318980:intron 40.0%
!! TTGAGGGTTGAAAGTATTGG+AGG - chr2_4:18181864-18181883 None:intergenic 40.0%
! GAGTTGAGGGTTGAAAGTAT+TGG - chr2_4:18181867-18181886 None:intergenic 40.0%
TTGCACGTAATCACATGTGT+CGG - chr2_4:18181945-18181964 None:intergenic 40.0%
!! TACACATGTTGGTGTTGTGT+TGG + chr2_4:18182092-18182111 Msa0318980:intron 40.0%
CACCCGAAACACTTTCAATT+TGG + chr2_4:18182138-18182157 Msa0318980:intron 40.0%
AGCCGATTATGATAGGGATA+AGG + chr2_4:18182901-18182920 Msa0318980:five_prime_UTR 40.0%
TGCCGTGAATGAGAAAAAGA+AGG + chr2_4:18182988-18183007 Msa0318980:five_prime_UTR 40.0%
GATGCAGCTTTCCAAAATTG+AGG + chr2_4:18183042-18183061 Msa0318980:five_prime_UTR 40.0%
TTCCAAAATTGAGGCAGAGA+AGG + chr2_4:18183051-18183070 Msa0318980:five_prime_UTR 40.0%
AGAAGCTCTTAGTGGAGAAA+AGG + chr2_4:18183194-18183213 Msa0318980:five_prime_UTR 40.0%
GATGAAAAAAGCTCAAGAGC+AGG + chr2_4:18183231-18183250 Msa0318980:five_prime_UTR 40.0%
GGCAGAGGTTGAAAAACAAA+AGG + chr2_4:18183252-18183271 Msa0318980:five_prime_UTR 40.0%
! AGCAAGATGTTTTGCTTCGT+TGG - chr2_4:18183341-18183360 None:intergenic 40.0%
AATTACGTGCAAAGCATGCA+AGG + chr2_4:18183533-18183552 Msa0318980:five_prime_UTR 40.0%
ATTACGTGCAAAGCATGCAA+GGG + chr2_4:18183534-18183553 Msa0318980:five_prime_UTR 40.0%
GGAAGAAGTTTGAGCATGAA+AGG + chr2_4:18183575-18183594 Msa0318980:five_prime_UTR 40.0%
AGGATGCATCCAGCATATTA+AGG - chr2_4:18183690-18183709 None:intergenic 40.0%
!! AAGTATACACGGACTAGCTA+AGG + chr2_4:18183726-18183745 Msa0318980:five_prime_UTR 40.0%
TGTATCCTTTCATCACACCA+TGG + chr2_4:18183814-18183833 Msa0318980:intron 40.0%
TTTCAAAGCCTTGCAGCATA+AGG + chr2_4:18184681-18184700 Msa0318980:CDS 40.0%
TTGGTGCATGCGATTCTTTA+AGG + chr2_4:18184705-18184724 Msa0318980:CDS 40.0%
TCAGATATAGCAAGAAGTGG+AGG - chr2_4:18184746-18184765 None:intergenic 40.0%
CCTTCAGATATAGCAAGAAG+TGG - chr2_4:18184749-18184768 None:intergenic 40.0%
! CCACTTCTTGCTATATCTGA+AGG + chr2_4:18184746-18184765 Msa0318980:CDS 40.0%
!! ACCAATACCTGTAATGGGTT+CGG - chr2_4:18184780-18184799 None:intergenic 40.0%
TCTAAATTGGAGCCTCTCAT+AGG + chr2_4:18184800-18184819 Msa0318980:CDS 40.0%
TCTTGCATTGAAGTTCTCCT+CGG - chr2_4:18184951-18184970 None:intergenic 40.0%
CCAATAACTGATCTGTCAGA+TGG - chr2_4:18184989-18185008 None:intergenic 40.0%
CCATCTGACAGATCAGTTAT+TGG + chr2_4:18184986-18185005 Msa0318980:CDS 40.0%
GAGAGATGGTTACTAATCAG+AGG + chr2_4:18185164-18185183 Msa0318980:CDS 40.0%
ATCTACATGCAGAGAATGAC+AGG + chr2_4:18185191-18185210 Msa0318980:CDS 40.0%
TCCAAAAGCTGTAGTCTATG+AGG + chr2_4:18185288-18185307 Msa0318980:CDS 40.0%
! TCCTCATAGACTACAGCTTT+TGG - chr2_4:18185292-18185311 None:intergenic 40.0%
TCAAACTACTCAGGCATGTA+GGG + chr2_4:18185354-18185373 Msa0318980:CDS 40.0%
GGGAAAATATAGTGGTGACA+AGG - chr2_4:18185497-18185516 None:intergenic 40.0%
TCAGTCTCGGGAAAATATAG+TGG - chr2_4:18185505-18185524 None:intergenic 40.0%
CGAGACTGAAACATTTGCTT+TGG + chr2_4:18185516-18185535 Msa0318980:CDS 40.0%
AGTTCTTCACACAGACTTGT+TGG + chr2_4:18185564-18185583 Msa0318980:CDS 40.0%
TTTGCCCTGTGTTCATTACA+AGG - chr2_4:18185667-18185686 None:intergenic 40.0%
ACAAACTGATGTGAAGTTGC+AGG + chr2_4:18185696-18185715 Msa0318980:CDS 40.0%
! TTGGTCTCATAGTATCGGAT+AGG + chr2_4:18185800-18185819 Msa0318980:CDS 40.0%
! TGGTCTCATAGTATCGGATA+GGG + chr2_4:18185801-18185820 Msa0318980:CDS 40.0%
CTGCAAGAAGTTGTATAGCA+CGG + chr2_4:18185857-18185876 Msa0318980:CDS 40.0%
TGCAGTTTGGATACTCAAAC+TGG + chr2_4:18185880-18185899 Msa0318980:CDS 40.0%
GTTTGGATACTCAAACTGGA+TGG + chr2_4:18185884-18185903 Msa0318980:CDS 40.0%
ACCATGACTGCAATGAAGTT+TGG + chr2_4:18186604-18186623 Msa0318980:CDS 40.0%
ACCAAACTTCATTGCAGTCA+TGG - chr2_4:18186608-18186627 None:intergenic 40.0%
ATGACTGCAATGAAGTTTGG+TGG + chr2_4:18186607-18186626 Msa0318980:CDS 40.0%
CAGCATAAGAACTCAAGCAA+AGG - chr2_4:18186645-18186664 None:intergenic 40.0%
GGAGTGTAATGTCTTGAAAG+TGG - chr2_4:18186875-18186894 None:intergenic 40.0%
AAAACCTGTTACATCGATGG+TGG + chr2_4:18187136-18187155 Msa0318980:intron 40.0%
! CTGCAGATGTGATTCTTTTG+TGG + chr2_4:18187537-18187556 Msa0318980:CDS 40.0%
! CACATTTTTGCTAATCTGGG+TGG + chr2_4:18187574-18187593 Msa0318980:CDS 40.0%
TAGTCATGTTTCTTGAGGGA+GGG + chr2_4:18187653-18187672 Msa0318980:CDS 40.0%
! GTATGCAGCTGATTTATTGC+TGG - chr2_4:18187706-18187725 None:intergenic 40.0%
GTTAAATGCCCTTTCTCAGA+AGG + chr2_4:18187742-18187761 Msa0318980:CDS 40.0%
! GTCTGAAAGGGATCTGAAAT+TGG - chr2_4:18187854-18187873 None:intergenic 40.0%
! TAATGGACAGTGCTCTAATC+AGG + chr2_4:18187882-18187901 Msa0318980:CDS 40.0%
! AGAATGTCACTAAGTTGGCA+TGG - chr2_4:18187916-18187935 None:intergenic 40.0%
ACGAGAGAATGTCACTAAGT+TGG - chr2_4:18187921-18187940 None:intergenic 40.0%
TAGTGACATTCTCTCGTTGT+TGG + chr2_4:18187924-18187943 Msa0318980:CDS 40.0%
!! GGAGCTTGTTGCAAACAAAA+TGG + chr2_4:18187945-18187964 Msa0318980:CDS 40.0%
TCATCGTCATTGATATGGCT+GGG - chr2_4:18188290-18188309 None:intergenic 40.0%
!! TTATTTTTCAGAGCTGGCAG+TGG + chr2_4:18188824-18188843 Msa0318980:intron 40.0%
!! CTGAGGAACAAGTTTTGTGT+TGG - chr2_4:18188851-18188870 None:intergenic 40.0%
ATTGTTCTTCTTGGTCAGCT+TGG + chr2_4:18188922-18188941 Msa0318980:CDS 40.0%
!!! TCCCTCTGGAACAACATTTT+TGG + chr2_4:18189105-18189124 Msa0318980:intron 40.0%
CAAAACTGTTCCAGAGTAGA+GGG - chr2_4:18189161-18189180 None:intergenic 40.0%
ACAAAACTGTTCCAGAGTAG+AGG - chr2_4:18189162-18189181 None:intergenic 40.0%
CAAGATTGTGTATGGGTTTG+TGG + chr2_4:18189203-18189222 Msa0318980:intron 40.0%
TAAGGGAAGCTGTAGTACAA+TGG + chr2_4:18189383-18189402 Msa0318980:intron 40.0%
TAAATAAAGTCCTGGGATGG+GGG - chr2_4:18189509-18189528 None:intergenic 40.0%
!!! CTTTTCTTGGAAGCTTTGGA+TGG + chr2_4:18189587-18189606 Msa0318980:intron 40.0%
TGCAATTCTTCCATGAAAGC+AGG + chr2_4:18189829-18189848 Msa0318980:CDS 40.0%
!!! GGTTGAGAGCTTTTGAGATA+TGG + chr2_4:18190150-18190169 Msa0318980:three_prime_UTR 40.0%
TGAAAATCACTGTTGCGCTG+AGG + chr2_4:18181118-18181137 Msa0318980:five_prime_UTR 45.0%
ACATAACTTTAGGCCCCGTT+TGG - chr2_4:18181689-18181708 None:intergenic 45.0%
TGTCATTGCCGTGTCTGTAT+CGG - chr2_4:18181750-18181769 None:intergenic 45.0%
!! ACTCAACTGGTTCGAGTTGA+GGG - chr2_4:18181880-18181899 None:intergenic 45.0%
!! AACTCAACTGGTTCGAGTTG+AGG - chr2_4:18181881-18181900 None:intergenic 45.0%
TGGTGTACACTCAACTCAAC+TGG - chr2_4:18181893-18181912 None:intergenic 45.0%
GTGTACACCAACACTTCTGA+TGG + chr2_4:18181903-18181922 Msa0318980:intron 45.0%
ACACCAACACTTCTGATGGA+AGG + chr2_4:18181907-18181926 Msa0318980:intron 45.0%
! ACACCTTCCATCAGAAGTGT+TGG - chr2_4:18181913-18181932 None:intergenic 45.0%
TGTCAGTGTTGTGCCTGTAT+CGG + chr2_4:18181993-18182012 Msa0318980:intron 45.0%
!! CTATGATGAAGCACCGATAC+AGG - chr2_4:18182009-18182028 None:intergenic 45.0%
! CTGTATCGGTGCTTCATCAT+AGG + chr2_4:18182007-18182026 Msa0318980:intron 45.0%
! CTTGCAATACTCTGAGTTGG+TGG + chr2_4:18182433-18182452 Msa0318980:intron 45.0%
!! TGAGTTGGTGGTTATCCACT+GGG + chr2_4:18182445-18182464 Msa0318980:intron 45.0%
CACAAATCACACACTCTGAG+AGG - chr2_4:18182662-18182681 None:intergenic 45.0%
! CAGAGTGTGTGATTTGTGAG+AGG + chr2_4:18182664-18182683 Msa0318980:intron 45.0%
TGTAGTTTCTGCAGCATACC+AGG + chr2_4:18182712-18182731 Msa0318980:intron 45.0%
ACTGCATTGCAGCAGAAATG+TGG + chr2_4:18182836-18182855 Msa0318980:five_prime_UTR 45.0%
ACAGGTGCTCAGGAAGAAAA+TGG + chr2_4:18182860-18182879 Msa0318980:five_prime_UTR 45.0%
CAGGTGCTCAGGAAGAAAAT+GGG + chr2_4:18182861-18182880 Msa0318980:five_prime_UTR 45.0%
AGGTGCTCAGGAAGAAAATG+GGG + chr2_4:18182862-18182881 Msa0318980:five_prime_UTR 45.0%
GGAAGAAAATGGGGATGTGA+AGG + chr2_4:18182871-18182890 Msa0318980:five_prime_UTR 45.0%
! AAGGGCTGATTCTGAGAAGA+AGG + chr2_4:18182964-18182983 Msa0318980:five_prime_UTR 45.0%
TTGCTGAAGCCTATACTCCT+CGG - chr2_4:18183077-18183096 None:intergenic 45.0%
TAGGCTTCAGCAAGTTCGTT+TGG + chr2_4:18183084-18183103 Msa0318980:five_prime_UTR 45.0%
! AGAGGCTTGCTCAAGATAAC+TGG + chr2_4:18183308-18183327 Msa0318980:five_prime_UTR 45.0%
TCTTGCTTATCAGAGGTCTC+AGG + chr2_4:18183354-18183373 Msa0318980:five_prime_UTR 45.0%
GAGGTCTCAGGAGTTATTGA+AGG + chr2_4:18183366-18183385 Msa0318980:five_prime_UTR 45.0%
ATGTGCCATGGTGTGATGAA+AGG - chr2_4:18183822-18183841 None:intergenic 45.0%
CATCACACCATGGCACATAT+AGG + chr2_4:18183824-18183843 Msa0318980:intron 45.0%
CTAAAAGAGGACAGCTGCAA+TGG + chr2_4:18183941-18183960 Msa0318980:intron 45.0%
CAGCATTTGATTGGCAGAAG+AGG + chr2_4:18184071-18184090 Msa0318980:five_prime_UTR 45.0%
CAGAAGAGGAAGACAAATCC+TGG + chr2_4:18184085-18184104 Msa0318980:five_prime_UTR 45.0%
ACATCAGGTTTCTGCATGCT+TGG - chr2_4:18184602-18184621 None:intergenic 45.0%
TCAACAGAGCTGTGCATTTG+AGG - chr2_4:18184653-18184672 None:intergenic 45.0%
AAGCCTTGCAGCATAAGGAT+TGG + chr2_4:18184686-18184705 Msa0318980:CDS 45.0%
ACCGAACCCATTACAGGTAT+TGG + chr2_4:18184776-18184795 Msa0318980:CDS 45.0%
AAATTGGAGCCTCTCATAGG+AGG + chr2_4:18184803-18184822 Msa0318980:CDS 45.0%
!! AAGTTCTCCTCGGCTGATTT+TGG - chr2_4:18184941-18184960 None:intergenic 45.0%
! GATAAGCTCTCTGACTTGTG+TGG + chr2_4:18185100-18185119 Msa0318980:CDS 45.0%
ATGAACGAATCCGTTGAAGG+AGG + chr2_4:18185139-18185158 Msa0318980:CDS 45.0%
TGAACGAATCCGTTGAAGGA+GGG + chr2_4:18185140-18185159 Msa0318980:CDS 45.0%
GGAAAAAGCAGGTACTTCTG+TGG + chr2_4:18185243-18185262 Msa0318980:CDS 45.0%
GTAGTCTATGAGGATGCAGA+TGG + chr2_4:18185298-18185317 Msa0318980:CDS 45.0%
CTCAAACTACTCAGGCATGT+AGG + chr2_4:18185353-18185372 Msa0318980:CDS 45.0%
TAATGAACACAGGGCAAAGC+AGG + chr2_4:18185669-18185688 Msa0318980:CDS 45.0%
GTTGCAGGACACTCATTCTT+TGG + chr2_4:18185711-18185730 Msa0318980:CDS 45.0%
!! GATACATTTCTGGTGGAGAC+TGG + chr2_4:18185745-18185764 Msa0318980:CDS 45.0%
! TCTCATAGTATCGGATAGGG+AGG + chr2_4:18185804-18185823 Msa0318980:CDS 45.0%
TTGTATAGCACGGTGCAGTT+TGG + chr2_4:18185867-18185886 Msa0318980:CDS 45.0%
CATTCTGTCTGCAGTTGACA+TGG + chr2_4:18185918-18185937 Msa0318980:CDS 45.0%
! CTTTACATCAAAGGCGTGTC+TGG + chr2_4:18186056-18186075 Msa0318980:intron 45.0%
ACTGACACAGACTAGGATAC+CGG - chr2_4:18186178-18186197 None:intergenic 45.0%
! CTTTACATCAAAGGCGTGTC+TGG + chr2_4:18186056-18186075 Msa0318980:intron 45.0%
ACTGACACAGACTAGGATAC+CGG - chr2_4:18186178-18186197 None:intergenic 45.0%
! ACTGCAATGAAGTTTGGTGG+TGG + chr2_4:18186610-18186629 Msa0318980:CDS 45.0%
TATGCTGAACACATCTGCAG+AGG + chr2_4:18186658-18186677 Msa0318980:CDS 45.0%
CAATCCACCATCGATGTAAC+AGG - chr2_4:18187143-18187162 None:intergenic 45.0%
CTATCAGATGAGGTCTCAGT+AGG - chr2_4:18187355-18187374 None:intergenic 45.0%
CTAGTCATGTTTCTTGAGGG+AGG + chr2_4:18187652-18187671 Msa0318980:CDS 45.0%
ACAGTGCTCTAATCAGGATG+TGG + chr2_4:18187888-18187907 Msa0318980:CDS 45.0%
GAATTTCATTCCCAGCAGCA+AGG + chr2_4:18188038-18188057 Msa0318980:intron 45.0%
GTCATCGTCATTGATATGGC+TGG - chr2_4:18188291-18188310 None:intergenic 45.0%
ACTTATCCTGGTTACTTCGC+AGG - chr2_4:18188549-18188568 None:intergenic 45.0%
TTCTTCTTGGTCAGCTTGGA+AGG + chr2_4:18188926-18188945 Msa0318980:CDS 45.0%
! GTAAGGTTGTCACTTCCCTT+TGG + chr2_4:18189043-18189062 Msa0318980:intron 45.0%
TGGGTTCATGTACTGTAAGG+TGG + chr2_4:18189077-18189096 Msa0318980:intron 45.0%
TCCTCGCATCACTCTATTTC+AGG - chr2_4:18189259-18189278 None:intergenic 45.0%
TAGTCTCTCTTGTAGATGCC+AGG + chr2_4:18189450-18189469 Msa0318980:intron 45.0%
! GTTGGTGGATATGAAGACCA+TGG + chr2_4:18189769-18189788 Msa0318980:CDS 45.0%
!! AAGAGAAGTGCCTGCTTTCA+TGG - chr2_4:18189842-18189861 None:intergenic 45.0%
! CTGATGACGCTGGAAGTTTA+AGG + chr2_4:18189965-18189984 Msa0318980:CDS 45.0%
ACGCTGGAAGTTTAAGGAAG+TGG + chr2_4:18189971-18189990 Msa0318980:CDS 45.0%
!!! AAAATAAAATTATTGATTAA+GGG + chr2_4:18181463-18181482 Msa0318980:intron 5.0%
!!! AATATTTTATATAAATCTTA+TGG + chr2_4:18184317-18184336 Msa0318980:five_prime_UTR 5.0%
GATTAAGGGCCCGTTTGGAT+TGG + chr2_4:18181477-18181496 Msa0318980:intron 50.0%
! CTTCTGATGGAAGGTGTGTC+AGG + chr2_4:18181916-18181935 Msa0318980:intron 50.0%
TACAGGCACAACACTGACAC+TGG - chr2_4:18181992-18182011 None:intergenic 50.0%
!! CTGAGTTGGTGGTTATCCAC+TGG + chr2_4:18182444-18182463 Msa0318980:intron 50.0%
TCGCTCTCGCTAATTCTTCC+TGG - chr2_4:18182733-18182752 None:intergenic 50.0%
TTGCAGCAGAAATGTGGCAC+AGG + chr2_4:18182842-18182861 Msa0318980:five_prime_UTR 50.0%
! GGCCTTCTCTGCCTCAATTT+TGG - chr2_4:18183056-18183075 None:intergenic 50.0%
AAAAGCTCAAGAGCAGGCAG+AGG + chr2_4:18183237-18183256 Msa0318980:five_prime_UTR 50.0%
AGCATGCAGATGAGCAGAAG+AGG + chr2_4:18183290-18183309 Msa0318980:five_prime_UTR 50.0%
ACTTCCAGCGACAGGTGAAA+AGG - chr2_4:18183710-18183729 None:intergenic 50.0%
! CCTGTCGCTGGAAGTATACA+CGG + chr2_4:18183715-18183734 Msa0318980:five_prime_UTR 50.0%
! GCTGAAACTGCTGACTGAGT+TGG + chr2_4:18184142-18184161 Msa0318980:five_prime_UTR 50.0%
CAGAGTTGAGTCACGACATC+AGG - chr2_4:18184617-18184636 None:intergenic 50.0%
GTGACTCAACTCTGCAGTCT+AGG + chr2_4:18184623-18184642 Msa0318980:CDS 50.0%
GCACCAATCCTTATGCTGCA+AGG - chr2_4:18184692-18184711 None:intergenic 50.0%
CTGTTTGAGCCTCCTATGAG+AGG - chr2_4:18184815-18184834 None:intergenic 50.0%
!! ACTTGATGGGCTCACAGGAA+AGG + chr2_4:18184891-18184910 Msa0318980:CDS 50.0%
!! CTTGATGGGCTCACAGGAAA+GGG + chr2_4:18184892-18184911 Msa0318980:CDS 50.0%
!! TTGATGGGCTCACAGGAAAG+GGG + chr2_4:18184893-18184912 Msa0318980:CDS 50.0%
!!! CTCGGCTGATTTTGGTGATG+TGG - chr2_4:18184933-18184952 None:intergenic 50.0%
CACATCACCAAAATCAGCCG+AGG + chr2_4:18184931-18184950 Msa0318980:CDS 50.0%
CATCTCTCTCCCTCCTTCAA+CGG - chr2_4:18185152-18185171 None:intergenic 50.0%
! TTTCTGGTGGAGACTGGAAC+TGG + chr2_4:18185751-18185770 Msa0318980:CDS 50.0%
ACTCAAACTGGATGGGCAGT+TGG + chr2_4:18185892-18185911 Msa0318980:CDS 50.0%
!! GTGAAGCACTGACACAGACT+AGG - chr2_4:18186185-18186204 None:intergenic 50.0%
!! GTGAAGCACTGACACAGACT+AGG - chr2_4:18186185-18186204 None:intergenic 50.0%
AGAAGCTACGAACGAGCAGT+TGG + chr2_4:18187426-18187445 Msa0318980:CDS 50.0%
!! TACGAACGAGCAGTTGGTAG+CGG + chr2_4:18187432-18187451 Msa0318980:CDS 50.0%
CTCGTGCAGTTATGGCTTGA+TGG + chr2_4:18187612-18187631 Msa0318980:CDS 50.0%
! ACTCGGCACCTTCTGAGAAA+GGG - chr2_4:18187753-18187772 None:intergenic 50.0%
TCCTCAGCTGCTTCATGTAC+TGG + chr2_4:18188864-18188883 Msa0318980:CDS 50.0%
TCCAGTACATGAAGCAGCTG+AGG - chr2_4:18188868-18188887 None:intergenic 50.0%
TGTACTGGACTCTTGTGCTG+TGG + chr2_4:18188879-18188898 Msa0318980:CDS 50.0%
TGTTCCAGAGTAGAGGGAGA+GGG - chr2_4:18189155-18189174 None:intergenic 50.0%
GCCTGAAATAGAGTGATGCG+AGG + chr2_4:18189255-18189274 Msa0318980:intron 50.0%
ATGCCAGGTATGACTGCCAA+TGG + chr2_4:18189465-18189484 Msa0318980:intron 50.0%
TGCCAGGTATGACTGCCAAT+GGG + chr2_4:18189466-18189485 Msa0318980:intron 50.0%
TAGGGAAGGATTGGACCCAT+TGG - chr2_4:18189484-18189503 None:intergenic 50.0%
!! ACCAGGCTTGGAGTTGATGT+TGG + chr2_4:18189751-18189770 Msa0318980:intron 50.0%
ACCAACATCAACTCCAAGCC+TGG - chr2_4:18189755-18189774 None:intergenic 50.0%
!! AGGCTTGGAGTTGATGTTGG+TGG + chr2_4:18189754-18189773 Msa0318980:intron 50.0%
TCTACTGCCACTGCACTGTT+TGG + chr2_4:18189868-18189887 Msa0318980:CDS 50.0%
AAGAAGGCCAAACAGTGCAG+TGG - chr2_4:18189878-18189897 None:intergenic 50.0%
GCAGACTGAGTTCAGTCTTC+AGG + chr2_4:18189921-18189940 Msa0318980:CDS 50.0%
! AGGAAGTGGTTTTCTGGGCT+AGG + chr2_4:18189985-18190004 Msa0318980:CDS 50.0%
! GGAAGTGGTTTTCTGGGCTA+GGG + chr2_4:18189986-18190005 Msa0318980:CDS 50.0%
!! GAAGTGGTTTTCTGGGCTAG+GGG + chr2_4:18189987-18190006 Msa0318980:CDS 50.0%
TTCCTCGCTCGCGCTTCTAA+TGG + chr2_4:18181008-18181027 Msa0318980:five_prime_UTR 55.0%
GAATGCTTGTTCTGCCGCCA+TGG - chr2_4:18181084-18181103 None:intergenic 55.0%
TGGTGGTTATCCACTGGGAG+AGG + chr2_4:18182450-18182469 Msa0318980:intron 55.0%
ATCAGTGTGTCCTCTCCCAG+TGG - chr2_4:18182463-18182482 None:intergenic 55.0%
GAAATGTGGCACAGGTGCTC+AGG + chr2_4:18182850-18182869 Msa0318980:five_prime_UTR 55.0%
AATTGAGGCAGAGAAGGCCG+AGG + chr2_4:18183057-18183076 Msa0318980:five_prime_UTR 55.0%
! CAGAGAAGGCCGAGGAGTAT+AGG + chr2_4:18183065-18183084 Msa0318980:five_prime_UTR 55.0%
! GCATCCTTTTCACCTGTCGC+TGG + chr2_4:18183703-18183722 Msa0318980:five_prime_UTR 55.0%
CCGTGTATACTTCCAGCGAC+AGG - chr2_4:18183718-18183737 None:intergenic 55.0%
!! TGCACACTTGATGGGCTCAC+AGG + chr2_4:18184886-18184905 Msa0318980:CDS 55.0%
CGTTGAAGGAGGGAGAGAGA+TGG + chr2_4:18185150-18185169 Msa0318980:CDS 55.0%
! CAAAGGCGTGTCTGGTGCAA+CGG + chr2_4:18186064-18186083 Msa0318980:intron 55.0%
! AAAGGCGTGTCTGGTGCAAC+GGG + chr2_4:18186065-18186084 Msa0318980:intron 55.0%
! AAAGGCGTGTCTGGTGCAAC+AGG + chr2_4:18186065-18186084 Msa0318980:intron 55.0%
GTGTCTGGTGCAACAGGTGT+CGG + chr2_4:18186348-18186367 Msa0318980:intron 55.0%
! GACTCGGCACCTTCTGAGAA+AGG - chr2_4:18187754-18187773 None:intergenic 55.0%
TTGTGCTGTGGAGAACGCTG+CGG + chr2_4:18188891-18188910 Msa0318980:CDS 55.0%
GTAAGGTGGTCACTTCCCTC+TGG + chr2_4:18189091-18189110 Msa0318980:intron 55.0%
CTGTTCCAGAGTAGAGGGAG+AGG - chr2_4:18189156-18189175 None:intergenic 55.0%
GACCCATTGGCAGTCATACC+TGG - chr2_4:18189471-18189490 None:intergenic 55.0%
ATGGGGGTCTAGGGAAGGAT+TGG - chr2_4:18189493-18189512 None:intergenic 55.0%
CTCGCTCGCGCTTCTAATGG+CGG + chr2_4:18181011-18181030 Msa0318980:five_prime_UTR 60.0%
GTGTCTGGTGCAACGGGTGT+CGG + chr2_4:18186071-18186090 Msa0318980:intron 60.0%
CATCACTGACACGCCGACAC+CGG - chr2_4:18186153-18186172 None:intergenic 60.0%
TCGGCGTGTCAGTGATGGTC+CGG + chr2_4:18186156-18186175 Msa0318980:intron 60.0%
CATCACTGACACGCCGACAC+CGG - chr2_4:18186153-18186172 None:intergenic 60.0%
TCGGCGTGTCAGTGATGGTC+CGG + chr2_4:18186156-18186175 Msa0318980:intron 60.0%
GTGTCCCTCTCCCTCTACTC+TGG + chr2_4:18189148-18189167 Msa0318980:intron 60.0%
AGTCCTGGGATGGGGGTCTA+GGG - chr2_4:18189502-18189521 None:intergenic 60.0%
AAGTCCTGGGATGGGGGTCT+AGG - chr2_4:18189503-18189522 None:intergenic 60.0%
! CGCCATTAGAAGCGCGAGCG+AGG - chr2_4:18181013-18181032 None:intergenic 65.0%
!! CGGTGTCGGCGTGTCAGTGA+TGG + chr2_4:18186151-18186170 Msa0318980:intron 65.0%
!! CGGTGTCGGCGTGTCAGTGA+TGG + chr2_4:18186151-18186170 Msa0318980:intron 65.0%
GGGGGTCCTGCGAAGTAACC+AGG + chr2_4:18188540-18188559 Msa0318980:intron 65.0%
CTGGGATGGGGGTCTAGGGA+AGG - chr2_4:18189498-18189517 None:intergenic 65.0%
CTTCCCTAGACCCCCATCCC+AGG + chr2_4:18189496-18189515 Msa0318980:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 18180840 18190369 18180840 ID=Msa0318980;Name=Msa0318980
chr2_4 mRNA 18180840 18190369 18180840 ID=Msa0318980-mRNA-1;Parent=Msa0318980;Name=Msa0318980-mRNA-1;_AED=0.01;_eAED=0.01;_QI=1876|1|1|1|0.75|0.88|9|313|872
chr2_4 exon 18180840 18181139 18180840 ID=Msa0318980-mRNA-1:exon:6799;Parent=Msa0318980-mRNA-1
chr2_4 exon 18181255 18181369 18181255 ID=Msa0318980-mRNA-1:exon:6800;Parent=Msa0318980-mRNA-1
chr2_4 exon 18182717 18183747 18182717 ID=Msa0318980-mRNA-1:exon:6801;Parent=Msa0318980-mRNA-1
chr2_4 exon 18184066 18184477 18184066 ID=Msa0318980-mRNA-1:exon:6802;Parent=Msa0318980-mRNA-1
chr2_4 exon 18184587 18185959 18184587 ID=Msa0318980-mRNA-1:exon:6803;Parent=Msa0318980-mRNA-1
chr2_4 exon 18186561 18186679 18186561 ID=Msa0318980-mRNA-1:exon:6804;Parent=Msa0318980-mRNA-1
chr2_4 exon 18187236 18187966 18187236 ID=Msa0318980-mRNA-1:exon:6805;Parent=Msa0318980-mRNA-1
chr2_4 exon 18188835 18188947 18188835 ID=Msa0318980-mRNA-1:exon:6806;Parent=Msa0318980-mRNA-1
chr2_4 exon 18189756 18190369 18189756 ID=Msa0318980-mRNA-1:exon:6807;Parent=Msa0318980-mRNA-1
chr2_4 five_prime_UTR 18180840 18181139 18180840 ID=Msa0318980-mRNA-1:five_prime_utr;Parent=Msa0318980-mRNA-1
chr2_4 five_prime_UTR 18181255 18181369 18181255 ID=Msa0318980-mRNA-1:five_prime_utr;Parent=Msa0318980-mRNA-1
chr2_4 five_prime_UTR 18182717 18183747 18182717 ID=Msa0318980-mRNA-1:five_prime_utr;Parent=Msa0318980-mRNA-1
chr2_4 five_prime_UTR 18184066 18184477 18184066 ID=Msa0318980-mRNA-1:five_prime_utr;Parent=Msa0318980-mRNA-1
chr2_4 five_prime_UTR 18184587 18184604 18184587 ID=Msa0318980-mRNA-1:five_prime_utr;Parent=Msa0318980-mRNA-1
chr2_4 CDS 18184605 18185959 18184605 ID=Msa0318980-mRNA-1:cds;Parent=Msa0318980-mRNA-1
chr2_4 CDS 18186561 18186679 18186561 ID=Msa0318980-mRNA-1:cds;Parent=Msa0318980-mRNA-1
chr2_4 CDS 18187236 18187966 18187236 ID=Msa0318980-mRNA-1:cds;Parent=Msa0318980-mRNA-1
chr2_4 CDS 18188835 18188947 18188835 ID=Msa0318980-mRNA-1:cds;Parent=Msa0318980-mRNA-1
chr2_4 CDS 18189756 18190056 18189756 ID=Msa0318980-mRNA-1:cds;Parent=Msa0318980-mRNA-1
chr2_4 three_prime_UTR 18190057 18190369 18190057 ID=Msa0318980-mRNA-1:three_prime_utr;Parent=Msa0318980-mRNA-1
Gene Sequence

>Msa0318980

ATGCAGAAACCTGATGTCGTGACTCAACTCTGCAGTCTAGGTATGCCTCAAATGCACAGCTCTGTTGAAAATGAACTTTCAAAGCCTTGCAGCATAAGGATTGGTGCATGCGATTCTTTAAGGAAAAGCATGCAGAGTCCTCCACTTCTTGCTATATCTGAAGGGAATTATACCGAACCCATTACAGGTATTGGTTCTAAATTGGAGCCTCTCATAGGAGGCTCAAACAGAACATCGATACAGAGTTATGCAGTAAATTCTAGTACAGCATCTTTTTCTGATGCACACTTGATGGGCTCACAGGAAAGGGGTGCTTTGCAAGTTACCACATCACCAAAATCAGCCGAGGAGAACTTCAATGCAAGATCAAGCATGTTGAAACCATCTGACAGATCAGTTATTGGTCATGATGGAATAAGGAATAGGATTTCTGATACAATCGAATGTGTTGCAAATTTGTCTTCTGAGGGTAAGAAGTTAAACATGCAGCTAGAAGATAAGCTCTCTGACTTGTGTGGTTTATTGTACGACAAAATGAACGAATCCGTTGAAGGAGGGAGAGAGATGGTTACTAATCAGAGGGACAATCTACATGCAGAGAATGACAGGCCCCATAAGAAGAGAAAGAAATCTCATAGGGAAAAAGCAGGTACTTCTGTGGATGAGAAAAAGAAAACAGAAGATCCAAAAGCTGTAGTCTATGAGGATGCAGATGGCTTCAAACAAACTAGCTGTCCTGCATTATATGCTCAAACTACTCAGGCATGTAGGGAGAAGATATTTGATGCCTCAAACAACTTTGATGAAATATATAATGGAAATGTTATGAAGTTGTTAGTCTTAGAAAATGCTGTTGATGAGGAACGCTATAGCATAGCGATGAATGCACCCTTGTCACCACTATATTTTCCCGAGACTGAAACATTTGCTTTGGATAATATGGAGCCTTTTCAGAATGAAGTTCTTCACACAGACTTGTTGGACCAAAGAGATTCATCTCCTTCAACTAGATGTGATGTCATTGATGTTGAGATGAATTCCAATGATGCATTTGCAATTCCTTGTAATGAACACAGGGCAAAGCAGGCTGTACAAACTGATGTGAAGTTGCAGGACACTCATTCTTTGGAAAATTTAAGGGATACATTTCTGGTGGAGACTGGAACTGGATCTTTACAGCATCAACTTCCTAATTTTGGTCTCATAGTATCGGATAGGGAGGATAATAGTTGCATATCTAGGACACTTCTTGCTGCAAGAAGTTGTATAGCACGGTGCAGTTTGGATACTCAAACTGGATGGGCAGTTGGTAGCATTCTGTCTGCAGTTGACATGGAAGAAATATCCATACAAAATGAGAAGCTTTCTGTGTTATTGACGCTTTTGCTGTTCAACTTCACCATGACTGCAATGAAGTTTGGTGGTGGCAACTTACTCCTTTGCTTGAGTTCTTATGCTGAACACATCTGCAGAGTTATGACTGATGCAGACACAAAAGTTTTGCTTTTAGAAAAAATTTCATTGCTGGGGCTGCTCCGCCTTATTGAAGACTTTCTTTTAGAAGGAAAAGTTATGTTAAAAAATTTTGTACCTACTGAGACCTCATCTGATAGTAATTTGAGAAACGATAGTTTTCTGGATGGCATAGACACACTATGTGCTAAAGAAGCTACGAACGAGCAGTTGGTAGCGGCGAGTATTATACTAGCATCATTATGTGCTGCAACTGATTATATTGGGTTTATTTCTGAGGCATCATATAATATTCTTAGGCTCTGCAGATGTGATTCTTTTGTGGTGCTAACTATTCTTCACATTTTTGCTAATCTGGGTGGAAGAACGTATTTTAACTCGTGCAGTTATGGCTTGATGGTGACTGTCTTGAAATCTCTAGTCATGTTTCTTGAGGGAGGGAGCGTATCTGTCACTACTTCTTGTCTTCCAGCAATAAATCAGCTGCATACTGATTTATGTTCTAATGTTAAATGCCCTTTCTCAGAAGGTGCCGAGTCCATTGATGTTGTTACATCGTTGCTCTTAGAAAATATCAAGAAGCATCCATTTCAGCAAGAACAACAGTTTGATTCGTCCAATTTCAGATCCCTTTCAGACAATTATAATAATGGACAGTGCTCTAATCAGGATGTGGTTCCATGCCAACTTAGTGACATTCTCTCGTTGTTGGAGCTTGTTGCAAACAAAATGAGCTGGCAGTGGACCAACACAAAACTTGTTCCTCAGCTGCTTCATGTACTGGACTCTTGTGCTGTGGAGAACGCTGCGGTTGCTATCATTGTTCTTCTTGGTCAGCTTGGAAGGCTTGGAGTTGATGTTGGTGGATATGAAGACCATGGAGTTGAGAATTTGAGATCTAAACTGCTGTCTTATCTATGCAATTCTTCCATGAAAGCAGGCACTTCTCTTCAAATTTCTACTGCCACTGCACTGTTTGGCCTTCTTCCTCTTGATTTAGAATCACTTTCGCAGACTGAGTTCAGTCTTCAGGCATATCCTAGTAAATCTATTTCTGATGACGCTGGAAGTTTAAGGAAGTGGTTTTCTGGGCTAGGGGAACATCAAAAAAATTTGCTTTACGGCATTTTAAGACCCACTGAATGA
Protein sequence

>Msa0318980

MQKPDVVTQLCSLGMPQMHSSVENELSKPCSIRIGACDSLRKSMQSPPLLAISEGNYTEPITGIGSKLEPLIGGSNRTSIQSYAVNSSTASFSDAHLMGSQERGALQVTTSPKSAEENFNARSSMLKPSDRSVIGHDGIRNRISDTIECVANLSSEGKKLNMQLEDKLSDLCGLLYDKMNESVEGGREMVTNQRDNLHAENDRPHKKRKKSHREKAGTSVDEKKKTEDPKAVVYEDADGFKQTSCPALYAQTTQACREKIFDASNNFDEIYNGNVMKLLVLENAVDEERYSIAMNAPLSPLYFPETETFALDNMEPFQNEVLHTDLLDQRDSSPSTRCDVIDVEMNSNDAFAIPCNEHRAKQAVQTDVKLQDTHSLENLRDTFLVETGTGSLQHQLPNFGLIVSDREDNSCISRTLLAARSCIARCSLDTQTGWAVGSILSAVDMEEISIQNEKLSVLLTLLLFNFTMTAMKFGGGNLLLCLSSYAEHICRVMTDADTKVLLLEKISLLGLLRLIEDFLLEGKVMLKNFVPTETSSDSNLRNDSFLDGIDTLCAKEATNEQLVAASIILASLCAATDYIGFISEASYNILRLCRCDSFVVLTILHIFANLGGRTYFNSCSYGLMVTVLKSLVMFLEGGSVSVTTSCLPAINQLHTDLCSNVKCPFSEGAESIDVVTSLLLENIKKHPFQQEQQFDSSNFRSLSDNYNNGQCSNQDVVPCQLSDILSLLELVANKMSWQWTNTKLVPQLLHVLDSCAVENAAVAIIVLLGQLGRLGVDVGGYEDHGVENLRSKLLSYLCNSSMKAGTSLQISTATALFGLLPLDLESLSQTEFSLQAYPSKSISDDAGSLRKWFSGLGEHQKNLLYGILRPTE*