Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0755010 | XP_003611397.1 | 85.195 | 385 | 7 | 1 | 1 | 385 | 1 | 335 | 0.0 | 654 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0755010 | G7JYM1 | 85.195 | 385 | 7 | 1 | 1 | 385 | 1 | 335 | 0.0 | 654 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040360 | Msa0755010 | 0.802670 | 5.025363e-49 | -8.615850e-47 |
| Msa0064990 | Msa0755010 | 0.804565 | 2.031988e-49 | -8.615850e-47 |
| Msa0713290 | Msa0755010 | 0.958710 | 1.199674e-116 | -8.615850e-47 |
| Msa0738680 | Msa0755010 | 0.816889 | 4.382221e-52 | -8.615850e-47 |
| Msa0755010 | Msa0789220 | 0.824215 | 9.108464e-54 | -8.615850e-47 |
| Msa0755010 | Msa0794240 | 0.827832 | 1.258457e-54 | -8.615850e-47 |
| Msa0755010 | Msa0799120 | 0.800763 | 1.237412e-48 | -8.615850e-47 |
| Msa0755010 | Msa0819150 | 0.823933 | 1.060698e-53 | -8.615850e-47 |
| Msa0755010 | Msa0826360 | 0.804640 | 1.960916e-49 | -8.615850e-47 |
| Msa0755010 | Msa0826370 | 0.802118 | 6.529861e-49 | -8.615850e-47 |
| Msa0755010 | Msa0940780 | 0.815695 | 8.104013e-52 | -8.615850e-47 |
| Msa0755010 | Msa1041260 | 0.818766 | 1.651428e-52 | -8.615850e-47 |
| Msa0755010 | Msa1110900 | 0.801790 | 7.626303e-49 | -8.615850e-47 |
| Msa0755010 | Msa1165660 | 0.836407 | 9.526377e-57 | -8.615850e-47 |
| Msa0755010 | Msa1179340 | 0.832889 | 7.307377e-56 | -8.615850e-47 |
| Msa0755010 | Msa1233090 | 0.815010 | 1.150490e-51 | -8.615850e-47 |
| Msa0755010 | Msa1275220 | 0.807424 | 5.089148e-50 | -8.615850e-47 |
| Msa0755010 | Msa1309040 | 0.811151 | 8.078582e-51 | -8.615850e-47 |
| Msa0755010 | Msa1313720 | 0.804169 | 2.458182e-49 | -8.615850e-47 |
| Msa0755010 | Msa1366470 | 0.826579 | 2.510153e-54 | -8.615850e-47 |
| Msa0755010 | Msa1383500 | 0.806134 | 9.531552e-50 | -8.615850e-47 |
| Msa0179450 | Msa0755010 | 0.810357 | 1.199989e-50 | -8.615850e-47 |
| Msa0236940 | Msa0755010 | 0.802959 | 4.379359e-49 | -8.615850e-47 |
| Msa0430320 | Msa0755010 | 0.818851 | 1.579317e-52 | -8.615850e-47 |
| Msa0430460 | Msa0755010 | 0.805461 | 1.319986e-49 | -8.615850e-47 |
| Msa0242720 | Msa0755010 | 0.817821 | 2.703239e-52 | -8.615850e-47 |
| Msa0584370 | Msa0755010 | 0.823802 | 1.138144e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0755010 | MtrunA17_Chr5g0399901 | 85.195 | 385 | 7 | 1 | 1 | 385 | 1 | 335 | 0.0 | 654 |
| Msa0755010 | MtrunA17_Chr7g0250211 | 47.244 | 381 | 143 | 5 | 1 | 379 | 1 | 325 | 9.21e-123 | 357 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0755010 | AT4G17070.1 | 50.639 | 391 | 132 | 4 | 1 | 384 | 1 | 337 | 2.78e-137 | 395 |
Find 109 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAACGTACCTCGCCGAATT+TGG | 0.198643 | 5_2:+8760822 | None:intergenic |
| GGCCCTTCTTCTTGCCGTTC+AGG | 0.233733 | 5_2:+8759851 | None:intergenic |
| TGGACTTCTGGTCTCATCTT+TGG | 0.244257 | 5_2:-8759809 | Msa0755010:CDS |
| GACTCTCTGCACGGTAAAAT+TGG | 0.245884 | 5_2:+8759132 | None:intergenic |
| AATCAAACGGTTTAACAAAA+TGG | 0.290860 | 5_2:+8761158 | None:intergenic |
| GGATTGAACATTTGGAGCTT+TGG | 0.296628 | 5_2:-8760990 | Msa0755010:CDS |
| GTTTCGGAGTTTAGGAATAT+TGG | 0.308114 | 5_2:-8761063 | Msa0755010:CDS |
| GACCTTGTCTTTGTGATACT+TGG | 0.312234 | 5_2:-8760876 | Msa0755010:CDS |
| GATTGAACATTTGGAGCTTT+GGG | 0.313465 | 5_2:-8760989 | Msa0755010:CDS |
| TCTCATCATCTCGTTAAATA+TGG | 0.314570 | 5_2:-8761205 | Msa0755010:exon |
| GCTAAGCTAATAAAGAATTC+TGG | 0.321705 | 5_2:+8757635 | None:intergenic |
| TCTGCAACATTCATGTCTTC+AGG | 0.329643 | 5_2:+8757563 | None:intergenic |
| GAGATAATTAGTTGGACTTC+TGG | 0.330854 | 5_2:-8759821 | Msa0755010:CDS |
| TATTGGGTCAACGTTGGATT+TGG | 0.337581 | 5_2:-8761046 | Msa0755010:CDS |
| TTTGGGGTTCAGCTGTGAAA+TGG | 0.348730 | 5_2:-8760972 | Msa0755010:CDS |
| TTGGGGTTCAGCTGTGAAAT+GGG | 0.348739 | 5_2:-8760971 | Msa0755010:CDS |
| TTGTTTCAAAATTTCAATCT+TGG | 0.350197 | 5_2:+8757435 | None:intergenic |
| TTGTAGAGGGATTGAACATT+TGG | 0.352124 | 5_2:-8760998 | Msa0755010:CDS |
| TTTCGGAGTTTAGGAATATT+GGG | 0.354752 | 5_2:-8761062 | Msa0755010:CDS |
| GTGGTTCTGTTTCGGAGTTT+AGG | 0.361159 | 5_2:-8761071 | Msa0755010:CDS |
| GCCCTTCTTCTTGCCGTTCA+GGG | 0.361547 | 5_2:+8759852 | None:intergenic |
| TCCCCACCTTACCTGATGTT+TGG | 0.362089 | 5_2:-8757526 | Msa0755010:CDS |
| TACCTTGAATTAATGCAAAT+GGG | 0.369067 | 5_2:+8757750 | None:intergenic |
| CGGCAAGAAGAAGGGCCTAA+TGG | 0.375581 | 5_2:-8759845 | Msa0755010:CDS |
| AACAAGAAGTGGTTCTGTTT+CGG | 0.378933 | 5_2:-8761079 | Msa0755010:CDS |
| GGCAAGAAGAAGGGCCTAAT+GGG | 0.381464 | 5_2:-8759844 | Msa0755010:CDS |
| TTGAAAATACGTATAAGCTT+TGG | 0.384747 | 5_2:+8757387 | None:intergenic |
| TCTTGTAAATCTATGTGTAC+TGG | 0.387269 | 5_2:-8760907 | Msa0755010:CDS |
| ACTGAACCTCTTCTTAAGAT+TGG | 0.389494 | 5_2:+8757677 | None:intergenic |
| AGAGGTTCAGTTGCTTTAAT+CGG | 0.390617 | 5_2:-8757665 | Msa0755010:CDS |
| TTATTGTTTGTTGTGTGAAT+CGG | 0.397286 | 5_2:-8760356 | Msa0755010:CDS |
| GTACCTTGAATTAATGCAAA+TGG | 0.397660 | 5_2:+8757749 | None:intergenic |
| CTTCTGAGCAAGAAAGGAAC+GGG | 0.412860 | 5_2:+8757473 | None:intergenic |
| TCAGAGATGAGATTGAATAA+AGG | 0.419151 | 5_2:+8761234 | None:intergenic |
| TTGCTAATCCAAGCCTAAAC+AGG | 0.430710 | 5_2:+8760406 | None:intergenic |
| CAACTAATTATCTCCCCATT+AGG | 0.432956 | 5_2:+8759830 | None:intergenic |
| CCCTCACTGTGCTCCACACA+CGG | 0.436663 | 5_2:-8759201 | Msa0755010:CDS |
| TATTGTTTGTTGTGTGAATC+GGG | 0.439905 | 5_2:-8760355 | Msa0755010:CDS |
| TCCACAGGAAGTTTATTGAA+TGG | 0.445167 | 5_2:+8757707 | None:intergenic |
| TCTGGTCTCATCTTTGGAAA+AGG | 0.445432 | 5_2:-8759803 | Msa0755010:CDS |
| TTGATTCTTCTGAGCAAGAA+AGG | 0.445719 | 5_2:+8757467 | None:intergenic |
| TTTCCAGGGTATTATTGGAT+TGG | 0.446563 | 5_2:-8759460 | Msa0755010:intron |
| GGAACGTGCCTGTTTAGGCT+TGG | 0.448999 | 5_2:-8760414 | Msa0755010:CDS |
| TTGCCTATGCGCCATTGTGC+AGG | 0.450005 | 5_2:-8759158 | Msa0755010:CDS |
| TATATATATCCGTTCTCAAA+TGG | 0.450907 | 5_2:+8757247 | None:intergenic |
| AGGCAACAGTTCTAGAATAT+AGG | 0.454860 | 5_2:+8759175 | None:intergenic |
| TTAACATTGTTCCAAACATC+AGG | 0.456879 | 5_2:+8757515 | None:intergenic |
| ATGTTGAAGGGTGTTGTAGA+GGG | 0.459948 | 5_2:-8761011 | Msa0755010:CDS |
| CAGAGAGTCGAGGTCAATCA+TGG | 0.465585 | 5_2:-8759118 | Msa0755010:CDS |
| GCCCCTGAACGGCAAGAAGA+AGG | 0.471860 | 5_2:-8759854 | Msa0755010:CDS |
| GAGGCTTGTGGATCCAAATT+CGG | 0.472505 | 5_2:-8760835 | Msa0755010:CDS |
| TGTGGGAATCGGGAGGCTTG+TGG | 0.475012 | 5_2:-8760847 | Msa0755010:CDS |
| TCTATGTGTACTGGGAAAGA+TGG | 0.477675 | 5_2:-8760898 | Msa0755010:CDS |
| GCTAATAAAGAATTCTGGAC+CGG | 0.479091 | 5_2:+8757640 | None:intergenic |
| CTTGTAAATCTATGTGTACT+GGG | 0.480690 | 5_2:-8760906 | Msa0755010:CDS |
| ATTTAACGAGATGATGAGAA+TGG | 0.481364 | 5_2:+8761209 | None:intergenic |
| TCAGACCGAAGTAGTATCTC+AGG | 0.486895 | 5_2:-8760111 | Msa0755010:intron |
| CTCTCTGCAGTAACAAGAAG+TGG | 0.492856 | 5_2:-8761090 | Msa0755010:CDS |
| TCAGTTGCTTTAATCGGTCC+CGG | 0.494464 | 5_2:-8757659 | Msa0755010:CDS |
| CAGCCTGCACAATGGCGCAT+AGG | 0.495252 | 5_2:+8759155 | None:intergenic |
| CGGTTTAACAAAATGGTGCT+TGG | 0.500683 | 5_2:+8761165 | None:intergenic |
| CCCCTGAACGGCAAGAAGAA+GGG | 0.504864 | 5_2:-8759853 | Msa0755010:CDS |
| ACCTTGTCTTTGTGATACTT+GGG | 0.507565 | 5_2:-8760875 | Msa0755010:CDS |
| AATGTTGAAGGGTGTTGTAG+AGG | 0.532744 | 5_2:-8761012 | Msa0755010:CDS |
| CCCTTCTTCTTGCCGTTCAG+GGG | 0.536761 | 5_2:+8759853 | None:intergenic |
| TTCCAAACATCAGGTAAGGT+GGG | 0.540243 | 5_2:+8757524 | None:intergenic |
| AGAATATAGGCAACCGTGTG+TGG | 0.540739 | 5_2:+8759188 | None:intergenic |
| CGAGACTAATCTCTCGAGCC+AGG | 0.541495 | 5_2:-8760322 | Msa0755010:intron |
| TGTTATAACATAGTCAAACT+TGG | 0.546544 | 5_2:-8761313 | Msa0755010:five_prime_UTR |
| GCTTAGCTGATCATTCAGAA+TGG | 0.548215 | 5_2:-8757619 | Msa0755010:CDS |
| GTTGGTGAGAAGAATGTTGA+AGG | 0.552001 | 5_2:-8761024 | Msa0755010:CDS |
| TGGGGTTCAGCTGTGAAATG+GGG | 0.556980 | 5_2:-8760970 | Msa0755010:CDS |
| ATTGTTCCAAACATCAGGTA+AGG | 0.563809 | 5_2:+8757520 | None:intergenic |
| GTTCCAAACATCAGGTAAGG+TGG | 0.566546 | 5_2:+8757523 | None:intergenic |
| AAGATTGGACAATCTTCCAC+AGG | 0.568792 | 5_2:+8757692 | None:intergenic |
| GGGTCAACGTTGGATTTGGT+TGG | 0.581467 | 5_2:-8761042 | Msa0755010:CDS |
| GATTGTCCAATCTTAAGAAG+AGG | 0.586819 | 5_2:-8757683 | Msa0755010:CDS |
| CTAATAAAGAATTCTGGACC+GGG | 0.590349 | 5_2:+8757641 | None:intergenic |
| AGGAACGGGTTTCTTCAAAA+CGG | 0.591662 | 5_2:+8757487 | None:intergenic |
| TCTTCTGAGCAAGAAAGGAA+CGG | 0.595069 | 5_2:+8757472 | None:intergenic |
| AAAGAGCTTCCATTTGAGAA+CGG | 0.598221 | 5_2:-8757256 | Msa0755010:three_prime_UTR |
| CTGGCTCGAGAGATTAGTCT+CGG | 0.602910 | 5_2:+8760323 | None:intergenic |
| CTAATGGGGAGATAATTAGT+TGG | 0.607611 | 5_2:-8759829 | Msa0755010:CDS |
| ATTGAACATTTGGAGCTTTG+GGG | 0.612386 | 5_2:-8760988 | Msa0755010:CDS |
| TAGGAATATTGGGTCAACGT+TGG | 0.612668 | 5_2:-8761052 | Msa0755010:CDS |
| GTGTTGGTTAAAGAAACAAA+AGG | 0.617424 | 5_2:-8759885 | Msa0755010:CDS |
| ACCATTCAATAAACTTCCTG+TGG | 0.619644 | 5_2:-8757708 | Msa0755010:CDS |
| ACCTTGAATTAATGCAAATG+GGG | 0.619873 | 5_2:+8757751 | None:intergenic |
| CGAGAGATTAGTCTCGGCAG+AGG | 0.620527 | 5_2:+8760329 | None:intergenic |
| CAAGGTACATTAGAAGCACA+AGG | 0.623038 | 5_2:-8757734 | Msa0755010:CDS |
| TCCAAACATCAGGTAAGGTG+GGG | 0.625666 | 5_2:+8757525 | None:intergenic |
| AGGACAGCTTAGCCCCTGAA+CGG | 0.629415 | 5_2:-8759865 | Msa0755010:CDS |
| GGTCAATCATGGGATTCAGA+AGG | 0.629530 | 5_2:-8759107 | Msa0755010:CDS |
| ACCGTGTGTGGAGCACAGTG+AGG | 0.642211 | 5_2:+8759200 | None:intergenic |
| CACTTCTTGTTACTGCAGAG+AGG | 0.644712 | 5_2:+8761091 | None:intergenic |
| ATTGACCTCGACTCTCTGCA+CGG | 0.645340 | 5_2:+8759123 | None:intergenic |
| CCGTGTGTGGAGCACAGTGA+GGG | 0.647084 | 5_2:+8759201 | None:intergenic |
| ACCGAAGTAGTATCTCAGGT+TGG | 0.647560 | 5_2:-8760107 | Msa0755010:CDS |
| AGAGAGTCGAGGTCAATCAT+GGG | 0.649366 | 5_2:-8759117 | Msa0755010:CDS |
| ATTGGATTGGAAACTGAACA+CGG | 0.650566 | 5_2:-8759447 | Msa0755010:CDS |
| AGATGAGATTGAATAAAGGA+CGG | 0.661591 | 5_2:+8761238 | None:intergenic |
| TCTCATCTTTGGAAAAGGAG+AGG | 0.663105 | 5_2:-8759798 | Msa0755010:intron |
| TCCAACCTGAGATACTACTT+CGG | 0.670636 | 5_2:+8760106 | None:intergenic |
| GCAAGAAGAAGGGCCTAATG+GGG | 0.681021 | 5_2:-8759843 | Msa0755010:CDS |
| AAAATTGGCAGCCTGCACAA+TGG | 0.683556 | 5_2:+8759147 | None:intergenic |
| CCTTGAATTAATGCAAATGG+GGG | 0.686229 | 5_2:+8757752 | None:intergenic |
| TTGGTGAGAAGAATGTTGAA+GGG | 0.704145 | 5_2:-8761023 | Msa0755010:CDS |
| ACCCAAGTATCACAAAGACA+AGG | 0.711556 | 5_2:+8760874 | None:intergenic |
| TTGTGGATCCAAATTCGGCG+AGG | 0.726847 | 5_2:-8760830 | Msa0755010:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTAATTCAACAATT+TGG | - | chr5_2:8758962-8758981 | Msa0755010:intron | 10.0% |
| !!! | ATTTTTTTTGTATTTACATT+TGG | + | chr5_2:8760057-8760076 | None:intergenic | 10.0% |
| !! | TGTAAATACAAAAAAAATAA+TGG | - | chr5_2:8760059-8760078 | Msa0755010:intron | 10.0% |
| !!! | ATTTTTATTGGATTAAAAAA+GGG | + | chr5_2:8760417-8760436 | None:intergenic | 10.0% |
| !!! | AATTTTTATTGGATTAAAAA+AGG | + | chr5_2:8760418-8760437 | None:intergenic | 10.0% |
| !!! | AATGAACTTATTTTTTAAAC+CGG | + | chr5_2:8758090-8758109 | None:intergenic | 15.0% |
| !! | TAAATATGATAAAATTCGTT+CGG | - | chr5_2:8758366-8758385 | Msa0755010:intron | 15.0% |
| !! | ATGTTAGTAAATTAAACTAA+TGG | - | chr5_2:8758468-8758487 | Msa0755010:intron | 15.0% |
| !! | TGTTAGTAAATTAAACTAAT+GGG | - | chr5_2:8758469-8758488 | Msa0755010:intron | 15.0% |
| !!! | ATTCTATTTTAAAATTGACT+TGG | - | chr5_2:8758806-8758825 | Msa0755010:intron | 15.0% |
| !!! | TTTGTAATCTCAATTTTTAT+TGG | + | chr5_2:8760429-8760448 | None:intergenic | 15.0% |
| !!! | TCTTCACTTAATTTTATTTT+TGG | - | chr5_2:8761245-8761264 | Msa0755010:five_prime_UTR | 15.0% |
| !!! | TACAATAAAAAATTTGCTTC+CGG | - | chr5_2:8758068-8758087 | Msa0755010:intron | 20.0% |
| !! | AAAAAATAAGTCTGATTTAG+TGG | + | chr5_2:8758410-8758429 | None:intergenic | 20.0% |
| !! | GAAATTAATAACTTTCTTTC+AGG | + | chr5_2:8758869-8758888 | None:intergenic | 20.0% |
| !!! | GAATTTTATCAACTTATGAA+AGG | - | chr5_2:8759026-8759045 | Msa0755010:intron | 20.0% |
| !!! | CGTATCTTACATTTTTTATA+TGG | + | chr5_2:8759472-8759491 | None:intergenic | 20.0% |
| !! | TACAACTATTAATGCAATTA+TGG | - | chr5_2:8759512-8759531 | Msa0755010:intron | 20.0% |
| !!! | ATCTATATGTGCTATTTTTT+TGG | - | chr5_2:8759648-8759667 | Msa0755010:intron | 20.0% |
| !! | ACAGTTAAATGAATCTAAAA+TGG | + | chr5_2:8759707-8759726 | None:intergenic | 20.0% |
| !! | TAACTGTATGAATTATTGTT+AGG | - | chr5_2:8759720-8759739 | Msa0755010:intron | 20.0% |
| !! | AAGAAAAAATAGTCCTAAAA+GGG | + | chr5_2:8760287-8760306 | None:intergenic | 20.0% |
| !! | TTGTTTCAAAATTTCAATCT+TGG | + | chr5_2:8761118-8761137 | None:intergenic | 20.0% |
| !!! | GAAATTTTGAAACAATTTGT+AGG | - | chr5_2:8761123-8761142 | Msa0755010:CDS | 20.0% |
| ! | TGTTATAACATAGTCAAACT+TGG | - | chr5_2:8757237-8757256 | Msa0755010:three_prime_UTR | 25.0% |
| ! | AATCAAACGGTTTAACAAAA+TGG | + | chr5_2:8757395-8757414 | None:intergenic | 25.0% |
| ! | ACACAAAAAGAAGAATCAAA+CGG | + | chr5_2:8757408-8757427 | None:intergenic | 25.0% |
| ! | TGAAATAATCACAATTGACA+CGG | + | chr5_2:8757849-8757868 | None:intergenic | 25.0% |
| !!! | TTATTGTTTGTTGTGTGAAT+CGG | - | chr5_2:8758194-8758213 | Msa0755010:intron | 25.0% |
| !! | TGTTTTCTTGTACATTCTTT+TGG | - | chr5_2:8758520-8758539 | Msa0755010:intron | 25.0% |
| !! | CAAGATCAACTTTTTGTTAA+AGG | + | chr5_2:8758624-8758643 | None:intergenic | 25.0% |
| ! | CATGTAATTTGGAGATAATT+AGG | + | chr5_2:8758912-8758931 | None:intergenic | 25.0% |
| ! | AACAGAAGAAACATGTAATT+TGG | + | chr5_2:8758923-8758942 | None:intergenic | 25.0% |
| !!! | AATTCATCTGTTTTTTTTCC+AGG | - | chr5_2:8759075-8759094 | Msa0755010:intron | 25.0% |
| !!! | ATTCATCTGTTTTTTTTCCA+GGG | - | chr5_2:8759076-8759095 | Msa0755010:intron | 25.0% |
| !!! | TTTTTTTTCCAGGGTATTAT+TGG | - | chr5_2:8759085-8759104 | Msa0755010:intron | 25.0% |
| !! | AAAGAAACATGGAAAGTATA+AGG | + | chr5_2:8759215-8759234 | None:intergenic | 25.0% |
| ! | AAACCATAATTATCATGTGA+CGG | + | chr5_2:8759262-8759281 | None:intergenic | 25.0% |
| ! | ACTATTAATGCAATTATGGT+AGG | - | chr5_2:8759516-8759535 | Msa0755010:intron | 25.0% |
| ! | CTCAACAAAACAATTCATAA+TGG | + | chr5_2:8759628-8759647 | None:intergenic | 25.0% |
| !! | CATATTTTTCTTGCTTTCAT+AGG | - | chr5_2:8759674-8759693 | Msa0755010:intron | 25.0% |
| !! | TTAAATGAATCTAAAATGGC+TGG | + | chr5_2:8759703-8759722 | None:intergenic | 25.0% |
| ! | ATCTTTCACTGATAATACAA+AGG | + | chr5_2:8759867-8759886 | None:intergenic | 25.0% |
| ! | TGTATTATCAGTGAAAGATT+AGG | - | chr5_2:8759760-8759779 | Msa0755010:intron | 25.0% |
| ! | GTATTATCAGTGAAAGATTT+GGG | + | chr5_2:8759865-8759884 | None:intergenic | 25.0% |
| ! | TGTATTATCAGTGAAAGATT+TGG | + | chr5_2:8759760-8759779 | None:intergenic | 25.0% |
| ! | ATCTTTCACTGATAATACAA+AGG | - | chr5_2:8759867-8759886 | Msa0755010:CDS | 25.0% |
| !! | TTTTCTTTACTCGTTTGAAT+CGG | - | chr5_2:8759975-8759994 | Msa0755010:intron | 25.0% |
| ! | GAAGAAAAAATAGTCCTAAA+AGG | + | chr5_2:8760288-8760307 | None:intergenic | 25.0% |
| !!! | TTAGGACTATTTTTTCTTCA+CGG | - | chr5_2:8760289-8760308 | Msa0755010:intron | 25.0% |
| ! | ATTCTCATATACTCTATATG+AGG | + | chr5_2:8760338-8760357 | None:intergenic | 25.0% |
| !! | TTTTTGAACAATGTTCCTTT+GGG | + | chr5_2:8760494-8760513 | None:intergenic | 25.0% |
| !!! | TTTTTTGAACAATGTTCCTT+TGG | + | chr5_2:8760495-8760514 | None:intergenic | 25.0% |
| ! | TCAAAAAAATGTATTCGCAA+AGG | - | chr5_2:8760507-8760526 | Msa0755010:intron | 25.0% |
| ! | ACAAACATTATTGTTCACTA+TGG | + | chr5_2:8760714-8760733 | None:intergenic | 25.0% |
| ! | TGTATAATAGTACTTTGTAG+TGG | - | chr5_2:8760731-8760750 | Msa0755010:intron | 25.0% |
| !!! | TAAATGAGTTCTTATTTTGC+AGG | - | chr5_2:8760764-8760783 | Msa0755010:intron | 25.0% |
| ! | TACCTTGAATTAATGCAAAT+GGG | + | chr5_2:8760803-8760822 | None:intergenic | 25.0% |
| !! | AAACAAGAATACACAGTTTT+TGG | - | chr5_2:8760954-8760973 | Msa0755010:CDS | 25.0% |
| ! | TTGAAAATACGTATAAGCTT+TGG | + | chr5_2:8761166-8761185 | None:intergenic | 25.0% |
| ! | TATATATATCCGTTCTCAAA+TGG | + | chr5_2:8761306-8761325 | None:intergenic | 25.0% |
| AGATGAGATTGAATAAAGGA+CGG | + | chr5_2:8757315-8757334 | None:intergenic | 30.0% | |
| TCAGAGATGAGATTGAATAA+AGG | + | chr5_2:8757319-8757338 | None:intergenic | 30.0% | |
| ATTTAACGAGATGATGAGAA+TGG | + | chr5_2:8757344-8757363 | None:intergenic | 30.0% | |
| TCTCATCATCTCGTTAAATA+TGG | - | chr5_2:8757345-8757364 | Msa0755010:three_prime_UTR | 30.0% | |
| !!! | TTTGTGTGTTTTGTTTCTTG+CGG | - | chr5_2:8757421-8757440 | Msa0755010:three_prime_UTR | 30.0% |
| TTTCGGAGTTTAGGAATATT+GGG | - | chr5_2:8757488-8757507 | Msa0755010:CDS | 30.0% | |
| TCTTGTAAATCTATGTGTAC+TGG | - | chr5_2:8757643-8757662 | Msa0755010:CDS | 30.0% | |
| CTTGTAAATCTATGTGTACT+GGG | - | chr5_2:8757644-8757663 | Msa0755010:CDS | 30.0% | |
| AAAACTACACCAATTCCAAA+AGG | + | chr5_2:8757904-8757923 | None:intergenic | 30.0% | |
| ! | TGCATGTTGTAGTACATTTT+AGG | - | chr5_2:8758115-8758134 | Msa0755010:intron | 30.0% |
| !! | TATTGTTTGTTGTGTGAATC+GGG | - | chr5_2:8758195-8758214 | Msa0755010:intron | 30.0% |
| !! | GTGTTGGTTAAAGAAACAAA+AGG | - | chr5_2:8758665-8758684 | Msa0755010:intron | 30.0% |
| TTTATGATGTATTGCACAGT+TGG | - | chr5_2:8759004-8759023 | Msa0755010:intron | 30.0% | |
| CCATCATTACTAAAGAAACA+TGG | + | chr5_2:8759226-8759245 | None:intergenic | 30.0% | |
| CCATGTTTCTTTAGTAATGA+TGG | - | chr5_2:8759223-8759242 | Msa0755010:intron | 30.0% | |
| TTTCATATTTGAACCTTCAC+TGG | - | chr5_2:8759284-8759303 | Msa0755010:intron | 30.0% | |
| AGGAAATAATTATCCAGTGA+AGG | + | chr5_2:8759300-8759319 | None:intergenic | 30.0% | |
| ATCAAAACATGCAAAGTATG+AGG | + | chr5_2:8759320-8759339 | None:intergenic | 30.0% | |
| TACTGCAATAACCTAACTAA+TGG | + | chr5_2:8759573-8759592 | None:intergenic | 30.0% | |
| TGAAAGATTAGGTAATGACA+AGG | - | chr5_2:8759771-8759790 | Msa0755010:intron | 30.0% | |
| GAAAGATTAGGTAATGACAA+GGG | - | chr5_2:8759772-8759791 | Msa0755010:intron | 30.0% | |
| AAAGATTAGGTAATGACAAG+GGG | - | chr5_2:8759773-8759792 | Msa0755010:intron | 30.0% | |
| TACGGGGTAATATTGTAATA+TGG | - | chr5_2:8759804-8759823 | Msa0755010:CDS | 30.0% | |
| !!! | CGATTTTTGGTAATGAAGTT+TGG | + | chr5_2:8759933-8759952 | None:intergenic | 30.0% |
| ! | AACAATGAACACACGATTTT+TGG | + | chr5_2:8759946-8759965 | None:intergenic | 30.0% |
| TTTCTTTACTCGTTTGAATC+GGG | - | chr5_2:8759976-8759995 | Msa0755010:intron | 30.0% | |
| TAAATCAGTTCACCTTGATT+TGG | + | chr5_2:8760096-8760115 | None:intergenic | 30.0% | |
| ! | CTCTGGATTTTCATTAATCA+AGG | - | chr5_2:8760139-8760158 | Msa0755010:intron | 30.0% |
| TCATAAAATGTCTATTGCTG+AGG | + | chr5_2:8760206-8760225 | None:intergenic | 30.0% | |
| ! | ACATTTTATGATCGAGAACA+TGG | - | chr5_2:8760215-8760234 | Msa0755010:intron | 30.0% |
| ! | TTAGAAAACACGGGTATTTT+TGG | + | chr5_2:8760244-8760263 | None:intergenic | 30.0% |
| !!! | CATTTTAGCTTAGAAAACAC+GGG | + | chr5_2:8760253-8760272 | None:intergenic | 30.0% |
| !!! | CCATTTTAGCTTAGAAAACA+CGG | + | chr5_2:8760254-8760273 | None:intergenic | 30.0% |
| TTGAATACAATGAATGTACC+TGG | + | chr5_2:8760388-8760407 | None:intergenic | 30.0% | |
| TATTTCCATATTCGCAATCT+CGG | - | chr5_2:8760543-8760562 | Msa0755010:intron | 30.0% | |
| ACCTTGAATTAATGCAAATG+GGG | + | chr5_2:8760802-8760821 | None:intergenic | 30.0% | |
| GTACCTTGAATTAATGCAAA+TGG | + | chr5_2:8760804-8760823 | None:intergenic | 30.0% | |
| GCTAAGCTAATAAAGAATTC+TGG | + | chr5_2:8760918-8760937 | None:intergenic | 30.0% | |
| TTAACATTGTTCCAAACATC+AGG | + | chr5_2:8761038-8761057 | None:intergenic | 30.0% | |
| ! | AACAAGAAGTGGTTCTGTTT+CGG | - | chr5_2:8757471-8757490 | Msa0755010:CDS | 35.0% |
| GTTTCGGAGTTTAGGAATAT+TGG | - | chr5_2:8757487-8757506 | Msa0755010:CDS | 35.0% | |
| TTGGTGAGAAGAATGTTGAA+GGG | - | chr5_2:8757527-8757546 | Msa0755010:CDS | 35.0% | |
| TTGTAGAGGGATTGAACATT+TGG | - | chr5_2:8757552-8757571 | Msa0755010:CDS | 35.0% | |
| ! | GATTGAACATTTGGAGCTTT+GGG | - | chr5_2:8757561-8757580 | Msa0755010:CDS | 35.0% |
| ! | ATTGAACATTTGGAGCTTTG+GGG | - | chr5_2:8757562-8757581 | Msa0755010:CDS | 35.0% |
| ACCTTGTCTTTGTGATACTT+GGG | - | chr5_2:8757675-8757694 | Msa0755010:CDS | 35.0% | |
| TTTAAATTCCCCCTTCCATT+TGG | - | chr5_2:8757872-8757891 | Msa0755010:intron | 35.0% | |
| TTAAATTCCCCCTTCCATTT+GGG | - | chr5_2:8757873-8757892 | Msa0755010:intron | 35.0% | |
| ! | TGATTTTGTGTTTGTGAACC+AGG | + | chr5_2:8758334-8758353 | None:intergenic | 35.0% |
| ! | GTTCGGTTTTGCTTATACTT+AGG | - | chr5_2:8758383-8758402 | Msa0755010:intron | 35.0% |
| TGGGAATGATTTCACTGTAT+TGG | - | chr5_2:8758488-8758507 | Msa0755010:intron | 35.0% | |
| TATAGAGTTCATCTGAGTTC+AGG | - | chr5_2:8758558-8758577 | Msa0755010:intron | 35.0% | |
| ! | TCAAACTTTTGTTGCAGTGT+TGG | - | chr5_2:8758649-8758668 | Msa0755010:intron | 35.0% |
| CAACTAATTATCTCCCCATT+AGG | + | chr5_2:8758723-8758742 | None:intergenic | 35.0% | |
| CTAATGGGGAGATAATTAGT+TGG | - | chr5_2:8758721-8758740 | Msa0755010:intron | 35.0% | |
| GAGATAATTAGTTGGACTTC+TGG | - | chr5_2:8758729-8758748 | Msa0755010:intron | 35.0% | |
| ! | TTTCCAGGGTATTATTGGAT+TGG | - | chr5_2:8759090-8759109 | Msa0755010:intron | 35.0% |
| TTTCCAATCCAATAATACCC+TGG | + | chr5_2:8759096-8759115 | None:intergenic | 35.0% | |
| ! | ATTGGATTGGAAACTGAACA+CGG | - | chr5_2:8759103-8759122 | Msa0755010:CDS | 35.0% |
| GATCCGTCACATGATAATTA+TGG | - | chr5_2:8759256-8759275 | Msa0755010:intron | 35.0% | |
| !! | AGGCAACAGTTCTAGAATAT+AGG | + | chr5_2:8759378-8759397 | None:intergenic | 35.0% |
| AGAAAGACTGAGCTTAAAAC+AGG | + | chr5_2:8759597-8759616 | None:intergenic | 35.0% | |
| AAGATTAGGTAATGACAAGG+GGG | - | chr5_2:8759774-8759793 | Msa0755010:intron | 35.0% | |
| AGTCAGAGATGTTGTGAAAT+TGG | - | chr5_2:8759907-8759926 | Msa0755010:intron | 35.0% | |
| GCAAATAGAATCAAAGTCTC+TGG | - | chr5_2:8760122-8760141 | Msa0755010:intron | 35.0% | |
| ! | CCGTGTTTTCTAAGCTAAAA+TGG | - | chr5_2:8760251-8760270 | Msa0755010:intron | 35.0% |
| ! | TGGATTTCAATGTCCCTTTT+AGG | - | chr5_2:8760271-8760290 | Msa0755010:intron | 35.0% |
| CTCTATATGAGGACAAAGAA+AGG | + | chr5_2:8760327-8760346 | None:intergenic | 35.0% | |
| GCTCATATTCACTGTTAAGT+GGG | + | chr5_2:8760692-8760711 | None:intergenic | 35.0% | |
| CCTTGAATTAATGCAAATGG+GGG | + | chr5_2:8760801-8760820 | None:intergenic | 35.0% | |
| ACCATTCAATAAACTTCCTG+TGG | - | chr5_2:8760842-8760861 | Msa0755010:CDS | 35.0% | |
| TCCACAGGAAGTTTATTGAA+TGG | + | chr5_2:8760846-8760865 | None:intergenic | 35.0% | |
| GATTGTCCAATCTTAAGAAG+AGG | - | chr5_2:8760867-8760886 | Msa0755010:CDS | 35.0% | |
| ACTGAACCTCTTCTTAAGAT+TGG | + | chr5_2:8760876-8760895 | None:intergenic | 35.0% | |
| ! | AGAGGTTCAGTTGCTTTAAT+CGG | - | chr5_2:8760885-8760904 | Msa0755010:CDS | 35.0% |
| CTAATAAAGAATTCTGGACC+GGG | + | chr5_2:8760912-8760931 | None:intergenic | 35.0% | |
| GCTAATAAAGAATTCTGGAC+CGG | + | chr5_2:8760913-8760932 | None:intergenic | 35.0% | |
| ATTGTTCCAAACATCAGGTA+AGG | + | chr5_2:8761033-8761052 | None:intergenic | 35.0% | |
| TTGATTCTTCTGAGCAAGAA+AGG | + | chr5_2:8761086-8761105 | None:intergenic | 35.0% | |
| AAAGAGCTTCCATTTGAGAA+CGG | - | chr5_2:8761294-8761313 | Msa0755010:five_prime_UTR | 35.0% | |
| CGGTTTAACAAAATGGTGCT+TGG | + | chr5_2:8757388-8757407 | None:intergenic | 40.0% | |
| !!! | GTGTTTTGTTTCTTGCGGTT+TGG | - | chr5_2:8757426-8757445 | Msa0755010:three_prime_UTR | 40.0% |
| TAGGAATATTGGGTCAACGT+TGG | - | chr5_2:8757498-8757517 | Msa0755010:CDS | 40.0% | |
| TATTGGGTCAACGTTGGATT+TGG | - | chr5_2:8757504-8757523 | Msa0755010:CDS | 40.0% | |
| ! | GTTGGTGAGAAGAATGTTGA+AGG | - | chr5_2:8757526-8757545 | Msa0755010:CDS | 40.0% |
| !! | AATGTTGAAGGGTGTTGTAG+AGG | - | chr5_2:8757538-8757557 | Msa0755010:CDS | 40.0% |
| !! | ATGTTGAAGGGTGTTGTAGA+GGG | - | chr5_2:8757539-8757558 | Msa0755010:CDS | 40.0% |
| ! | GGATTGAACATTTGGAGCTT+TGG | - | chr5_2:8757560-8757579 | Msa0755010:CDS | 40.0% |
| TCTATGTGTACTGGGAAAGA+TGG | - | chr5_2:8757652-8757671 | Msa0755010:CDS | 40.0% | |
| GACCTTGTCTTTGTGATACT+TGG | - | chr5_2:8757674-8757693 | Msa0755010:CDS | 40.0% | |
| ACCCAAGTATCACAAAGACA+AGG | + | chr5_2:8757679-8757698 | None:intergenic | 40.0% | |
| ! | TGTGATACTTGGGTGTTTTG+TGG | - | chr5_2:8757685-8757704 | Msa0755010:CDS | 40.0% |
| ! | GTGATACTTGGGTGTTTTGT+GGG | - | chr5_2:8757686-8757705 | Msa0755010:CDS | 40.0% |
| TACATGTGTTTGTGTCTGTG+TGG | + | chr5_2:8757764-8757783 | None:intergenic | 40.0% | |
| AAGGATAGACCCAAATGGAA+GGG | + | chr5_2:8757885-8757904 | None:intergenic | 40.0% | |
| AAAGGATAGACCCAAATGGA+AGG | + | chr5_2:8757886-8757905 | None:intergenic | 40.0% | |
| ! | TCCATTTGGGTCTATCCTTT+TGG | - | chr5_2:8757886-8757905 | Msa0755010:intron | 40.0% |
| TCCAAAAGGATAGACCCAAA+TGG | + | chr5_2:8757890-8757909 | None:intergenic | 40.0% | |
| !!! | TGGGTCTATCCTTTTGGAAT+TGG | - | chr5_2:8757892-8757911 | Msa0755010:intron | 40.0% |
| ACGTGATCTTGATCTAGTCT+AGG | + | chr5_2:8757973-8757992 | None:intergenic | 40.0% | |
| !! | TTTTAGGAACGTGCCTGTTT+AGG | - | chr5_2:8758131-8758150 | Msa0755010:intron | 40.0% |
| TTGCTAATCCAAGCCTAAAC+AGG | + | chr5_2:8758147-8758166 | None:intergenic | 40.0% | |
| TCCAACCTGAGATACTACTT+CGG | + | chr5_2:8758447-8758466 | None:intergenic | 40.0% | |
| ! | TCTGGTCTCATCTTTGGAAA+AGG | - | chr5_2:8758747-8758766 | Msa0755010:intron | 40.0% |
| ! | TCTCATCTTTGGAAAAGGAG+AGG | - | chr5_2:8758752-8758771 | Msa0755010:intron | 40.0% |
| AAGGAGAGGTAACTGAAGTT+TGG | - | chr5_2:8758766-8758785 | Msa0755010:intron | 40.0% | |
| CACTCTCATTGCCATTAGTT+AGG | - | chr5_2:8759559-8759578 | Msa0755010:intron | 40.0% | |
| GAAACCATCACACCAAATCA+AGG | - | chr5_2:8760081-8760100 | Msa0755010:intron | 40.0% | |
| !! | TTCACCTTGATTTGGTGTGA+TGG | + | chr5_2:8760088-8760107 | None:intergenic | 40.0% |
| ! | GGGTTACAAAAGTGCAAACA+TGG | + | chr5_2:8760170-8760189 | None:intergenic | 40.0% |
| ! | TGTTTGCACTTTTGTAACCC+AGG | - | chr5_2:8760170-8760189 | Msa0755010:intron | 40.0% |
| CATGTTAACGATACAAAGCC+AGG | - | chr5_2:8760367-8760386 | Msa0755010:CDS | 40.0% | |
| ! | TTCTGTTGATGCCATTTGCA+TGG | - | chr5_2:8760461-8760480 | Msa0755010:intron | 40.0% |
| TGGGAATACTACCATGCAAA+TGG | + | chr5_2:8760475-8760494 | None:intergenic | 40.0% | |
| TTGCATGGTAGTATTCCCAA+AGG | - | chr5_2:8760476-8760495 | Msa0755010:intron | 40.0% | |
| GGCTCATATTCACTGTTAAG+TGG | + | chr5_2:8760693-8760712 | None:intergenic | 40.0% | |
| !!! | TGAGTTCTTATTTTGCAGGC+TGG | - | chr5_2:8760768-8760787 | Msa0755010:intron | 40.0% |
| !!! | CTTATTTTGCAGGCTGGTTT+TGG | - | chr5_2:8760774-8760793 | Msa0755010:intron | 40.0% |
| CCCCCATTTGCATTAATTCA+AGG | - | chr5_2:8760798-8760817 | Msa0755010:intron | 40.0% | |
| ! | CAAGGTACATTAGAAGCACA+AGG | - | chr5_2:8760816-8760835 | Msa0755010:intron | 40.0% |
| AAGATTGGACAATCTTCCAC+AGG | + | chr5_2:8760861-8760880 | None:intergenic | 40.0% | |
| GCTTAGCTGATCATTCAGAA+TGG | - | chr5_2:8760931-8760950 | Msa0755010:CDS | 40.0% | |
| TCTGCAACATTCATGTCTTC+AGG | + | chr5_2:8760990-8761009 | None:intergenic | 40.0% | |
| TTCCAAACATCAGGTAAGGT+GGG | + | chr5_2:8761029-8761048 | None:intergenic | 40.0% | |
| ! | AGGAACGGGTTTCTTCAAAA+CGG | + | chr5_2:8761066-8761085 | None:intergenic | 40.0% |
| TCTTCTGAGCAAGAAAGGAA+CGG | + | chr5_2:8761081-8761100 | None:intergenic | 40.0% | |
| CACTTCTTGTTACTGCAGAG+AGG | + | chr5_2:8757462-8757481 | None:intergenic | 45.0% | |
| CTCTCTGCAGTAACAAGAAG+TGG | - | chr5_2:8757460-8757479 | Msa0755010:CDS | 45.0% | |
| ! | GTGGTTCTGTTTCGGAGTTT+AGG | - | chr5_2:8757479-8757498 | Msa0755010:CDS | 45.0% |
| ! | TTTGGGGTTCAGCTGTGAAA+TGG | - | chr5_2:8757578-8757597 | Msa0755010:CDS | 45.0% |
| TTGGGGTTCAGCTGTGAAAT+GGG | - | chr5_2:8757579-8757598 | Msa0755010:CDS | 45.0% | |
| ! | CTTGGGTGTTTTGTGGGAAT+CGG | - | chr5_2:8757692-8757711 | Msa0755010:CDS | 45.0% |
| ! | TTGGGTGTTTTGTGGGAATC+GGG | - | chr5_2:8757693-8757712 | Msa0755010:CDS | 45.0% |
| GAGGCTTGTGGATCCAAATT+CGG | - | chr5_2:8757715-8757734 | Msa0755010:CDS | 45.0% | |
| GTGTCTGTGTGGACAAAAAC+AGG | + | chr5_2:8757753-8757772 | None:intergenic | 45.0% | |
| ATCACAATTGACACGGACAC+TGG | + | chr5_2:8757842-8757861 | None:intergenic | 45.0% | |
| AGGATAGACCCAAATGGAAG+GGG | + | chr5_2:8757884-8757903 | None:intergenic | 45.0% | |
| TCAGACCGAAGTAGTATCTC+AGG | - | chr5_2:8758439-8758458 | Msa0755010:intron | 45.0% | |
| ACCGAAGTAGTATCTCAGGT+TGG | - | chr5_2:8758443-8758462 | Msa0755010:intron | 45.0% | |
| TGGACTTCTGGTCTCATCTT+TGG | - | chr5_2:8758741-8758760 | Msa0755010:intron | 45.0% | |
| AGAATATAGGCAACCGTGTG+TGG | + | chr5_2:8759365-8759384 | None:intergenic | 45.0% | |
| AAAATTGGCAGCCTGCACAA+TGG | + | chr5_2:8759406-8759425 | None:intergenic | 45.0% | |
| GACTCTCTGCACGGTAAAAT+TGG | + | chr5_2:8759421-8759440 | None:intergenic | 45.0% | |
| AGAGAGTCGAGGTCAATCAT+GGG | - | chr5_2:8759433-8759452 | Msa0755010:CDS | 45.0% | |
| GGTCAATCATGGGATTCAGA+AGG | - | chr5_2:8759443-8759462 | Msa0755010:CDS | 45.0% | |
| TGACAAGGGGGAACTGTTTA+CGG | - | chr5_2:8759786-8759805 | Msa0755010:intron | 45.0% | |
| CTGTACCGAGATTGCGAATA+TGG | + | chr5_2:8760551-8760570 | None:intergenic | 45.0% | |
| TAAGTGGGAAGAGTCTTCAG+TGG | + | chr5_2:8760677-8760696 | None:intergenic | 45.0% | |
| ! | TCAGTTGCTTTAATCGGTCC+CGG | - | chr5_2:8760891-8760910 | Msa0755010:CDS | 45.0% |
| TCCAAACATCAGGTAAGGTG+GGG | + | chr5_2:8761028-8761047 | None:intergenic | 45.0% | |
| GTTCCAAACATCAGGTAAGG+TGG | + | chr5_2:8761030-8761049 | None:intergenic | 45.0% | |
| CTTCTGAGCAAGAAAGGAAC+GGG | + | chr5_2:8761080-8761099 | None:intergenic | 45.0% | |
| !!! | TATCATTTTATTTTATTTTT+TGG | - | chr5_2:8758583-8758602 | Msa0755010:intron | 5.0% |
| !!! | ATCATTTTATTTTATTTTTT+GGG | - | chr5_2:8758584-8758603 | Msa0755010:intron | 5.0% |
| ! | GGGTCAACGTTGGATTTGGT+TGG | - | chr5_2:8757508-8757527 | Msa0755010:CDS | 50.0% |
| TGGGGTTCAGCTGTGAAATG+GGG | - | chr5_2:8757580-8757599 | Msa0755010:CDS | 50.0% | |
| TTGTGGATCCAAATTCGGCG+AGG | - | chr5_2:8757720-8757739 | Msa0755010:CDS | 50.0% | |
| GTAACGTACCTCGCCGAATT+TGG | + | chr5_2:8757731-8757750 | None:intergenic | 50.0% | |
| GGATAGACCCAAATGGAAGG+GGG | + | chr5_2:8757883-8757902 | None:intergenic | 50.0% | |
| !! | CTGGCTCGAGAGATTAGTCT+CGG | + | chr5_2:8758230-8758249 | None:intergenic | 50.0% |
| AAGCTCTTTGCGGTCATACC+TGG | + | chr5_2:8758249-8758268 | None:intergenic | 50.0% | |
| ATGGGGAGCAAAGCTCTTTG+CGG | + | chr5_2:8758259-8758278 | None:intergenic | 50.0% | |
| AAGAGCTTTGCTCCCCATTC+TGG | - | chr5_2:8758261-8758280 | Msa0755010:intron | 50.0% | |
| CAGTTGCATGCAGAGATACC+TGG | - | chr5_2:8758313-8758332 | Msa0755010:intron | 50.0% | |
| GGCAAGAAGAAGGGCCTAAT+GGG | - | chr5_2:8758706-8758725 | Msa0755010:intron | 50.0% | |
| GCAAGAAGAAGGGCCTAATG+GGG | - | chr5_2:8758707-8758726 | Msa0755010:intron | 50.0% | |
| ! | TTTTACCGTGCAGAGAGTCG+AGG | - | chr5_2:8759422-8759441 | Msa0755010:intron | 50.0% |
| ATTGACCTCGACTCTCTGCA+CGG | + | chr5_2:8759430-8759449 | None:intergenic | 50.0% | |
| CAGAGAGTCGAGGTCAATCA+TGG | - | chr5_2:8759432-8759451 | Msa0755010:CDS | 50.0% | |
| GACAAGGGGGAACTGTTTAC+GGG | - | chr5_2:8759787-8759806 | Msa0755010:intron | 50.0% | |
| ACAAGGGGGAACTGTTTACG+GGG | - | chr5_2:8759788-8759807 | Msa0755010:intron | 50.0% | |
| ! | GCTGAGGCATCAAATCTCCT+GGG | + | chr5_2:8760190-8760209 | None:intergenic | 50.0% |
| ! | TGCTGAGGCATCAAATCTCC+TGG | + | chr5_2:8760191-8760210 | None:intergenic | 50.0% |
| TCCCCACCTTACCTGATGTT+TGG | - | chr5_2:8761024-8761043 | Msa0755010:CDS | 50.0% | |
| ! | GGTGTTTTGTGGGAATCGGG+AGG | - | chr5_2:8757696-8757715 | Msa0755010:CDS | 55.0% |
| GGAACGTGCCTGTTTAGGCT+TGG | - | chr5_2:8758136-8758155 | Msa0755010:intron | 55.0% | |
| !! | CGAGAGATTAGTCTCGGCAG+AGG | + | chr5_2:8758224-8758243 | None:intergenic | 55.0% |
| CGAGACTAATCTCTCGAGCC+AGG | - | chr5_2:8758228-8758247 | Msa0755010:intron | 55.0% | |
| AGAGATTGATCCCTCGAGCC+GGG | + | chr5_2:8758292-8758311 | None:intergenic | 55.0% | |
| CAGAGATTGATCCCTCGAGC+CGG | + | chr5_2:8758293-8758312 | None:intergenic | 55.0% | |
| AGGACAGCTTAGCCCCTGAA+CGG | - | chr5_2:8758685-8758704 | Msa0755010:intron | 55.0% | |
| CCCTTCTTCTTGCCGTTCAG+GGG | + | chr5_2:8758700-8758719 | None:intergenic | 55.0% | |
| CCCCTGAACGGCAAGAAGAA+GGG | - | chr5_2:8758697-8758716 | Msa0755010:intron | 55.0% | |
| GCCCTTCTTCTTGCCGTTCA+GGG | + | chr5_2:8758701-8758720 | None:intergenic | 55.0% | |
| CGGCAAGAAGAAGGGCCTAA+TGG | - | chr5_2:8758705-8758724 | Msa0755010:intron | 55.0% | |
| TTGCCTATGCGCCATTGTGC+AGG | - | chr5_2:8759392-8759411 | Msa0755010:intron | 55.0% | |
| TGTGGGAATCGGGAGGCTTG+TGG | - | chr5_2:8757703-8757722 | Msa0755010:CDS | 60.0% | |
| CTCCCCATTCTGGTCCTACC+CGG | - | chr5_2:8758271-8758290 | Msa0755010:intron | 60.0% | |
| AGCCGGGTAGGACCAGAATG+GGG | + | chr5_2:8758276-8758295 | None:intergenic | 60.0% | |
| GAGCCGGGTAGGACCAGAAT+GGG | + | chr5_2:8758277-8758296 | None:intergenic | 60.0% | |
| ATTGATCCCTCGAGCCGGGT+AGG | + | chr5_2:8758288-8758307 | None:intergenic | 60.0% | |
| GCCCCTGAACGGCAAGAAGA+AGG | - | chr5_2:8758696-8758715 | Msa0755010:intron | 60.0% | |
| GGCCCTTCTTCTTGCCGTTC+AGG | + | chr5_2:8758702-8758721 | None:intergenic | 60.0% | |
| CCGTGTGTGGAGCACAGTGA+GGG | + | chr5_2:8759352-8759371 | None:intergenic | 60.0% | |
| CCCTCACTGTGCTCCACACA+CGG | - | chr5_2:8759349-8759368 | Msa0755010:intron | 60.0% | |
| ACCGTGTGTGGAGCACAGTG+AGG | + | chr5_2:8759353-8759372 | None:intergenic | 60.0% | |
| CAGCCTGCACAATGGCGCAT+AGG | + | chr5_2:8759398-8759417 | None:intergenic | 60.0% | |
| CGAGCCGGGTAGGACCAGAA+TGG | + | chr5_2:8758278-8758297 | None:intergenic | 65.0% | |
| ! | TTCTGGTCCTACCCGGCTCG+AGG | - | chr5_2:8758278-8758297 | Msa0755010:intron | 65.0% |
| ! | TCTGGTCCTACCCGGCTCGA+GGG | - | chr5_2:8758279-8758298 | Msa0755010:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 8757219 | 8761353 | 8757219 | ID=Msa0755010;Name=Msa0755010 |
| chr5_2 | mRNA | 8757219 | 8761353 | 8757219 | ID=Msa0755010-mRNA-1;Parent=Msa0755010;Name=Msa0755010-mRNA-1;_AED=0.15;_eAED=0.15;_QI=145|0.5|0.71|0.71|1|1|7|229|385 |
| chr5_2 | exon | 8757219 | 8757786 | 8757219 | ID=Msa0755010-mRNA-1:exon:3994;Parent=Msa0755010-mRNA-1 |
| chr5_2 | exon | 8759091 | 8759228 | 8759091 | ID=Msa0755010-mRNA-1:exon:3993;Parent=Msa0755010-mRNA-1 |
| chr5_2 | exon | 8759431 | 8759475 | 8759431 | ID=Msa0755010-mRNA-1:exon:3992;Parent=Msa0755010-mRNA-1 |
| chr5_2 | exon | 8759799 | 8759906 | 8759799 | ID=Msa0755010-mRNA-1:exon:3991;Parent=Msa0755010-mRNA-1 |
| chr5_2 | exon | 8760103 | 8760129 | 8760103 | ID=Msa0755010-mRNA-1:exon:3990;Parent=Msa0755010-mRNA-1 |
| chr5_2 | exon | 8760323 | 8760445 | 8760323 | ID=Msa0755010-mRNA-1:exon:3989;Parent=Msa0755010-mRNA-1 |
| chr5_2 | exon | 8760831 | 8761353 | 8760831 | ID=Msa0755010-mRNA-1:exon:3988;Parent=Msa0755010-mRNA-1 |
| chr5_2 | five_prime_UTR | 8761209 | 8761353 | 8761209 | ID=Msa0755010-mRNA-1:five_prime_utr;Parent=Msa0755010-mRNA-1 |
| chr5_2 | CDS | 8760831 | 8761208 | 8760831 | ID=Msa0755010-mRNA-1:cds;Parent=Msa0755010-mRNA-1 |
| chr5_2 | CDS | 8760323 | 8760445 | 8760323 | ID=Msa0755010-mRNA-1:cds;Parent=Msa0755010-mRNA-1 |
| chr5_2 | CDS | 8760103 | 8760129 | 8760103 | ID=Msa0755010-mRNA-1:cds;Parent=Msa0755010-mRNA-1 |
| chr5_2 | CDS | 8759799 | 8759906 | 8759799 | ID=Msa0755010-mRNA-1:cds;Parent=Msa0755010-mRNA-1 |
| chr5_2 | CDS | 8759431 | 8759475 | 8759431 | ID=Msa0755010-mRNA-1:cds;Parent=Msa0755010-mRNA-1 |
| chr5_2 | CDS | 8759091 | 8759228 | 8759091 | ID=Msa0755010-mRNA-1:cds;Parent=Msa0755010-mRNA-1 |
| chr5_2 | CDS | 8757448 | 8757786 | 8757448 | ID=Msa0755010-mRNA-1:cds;Parent=Msa0755010-mRNA-1 |
| chr5_2 | three_prime_UTR | 8757219 | 8757447 | 8757219 | ID=Msa0755010-mRNA-1:three_prime_utr;Parent=Msa0755010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
