Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366470 | XP_013450374.1 | 96.277 | 564 | 21 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1101 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366470 | sp|Q8RXK7|PME41_ARATH | 59.478 | 575 | 204 | 11 | 8 | 563 | 8 | 572 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366470 | A0A072U3Z0 | 96.277 | 564 | 21 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1101 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0050060 | Msa1366470 | 0.805387 | 1.367844e-49 | -8.615850e-47 |
| Msa0059420 | Msa1366470 | 0.806254 | 8.995343e-50 | -8.615850e-47 |
| Msa0064990 | Msa1366470 | 0.802028 | 6.814399e-49 | -8.615850e-47 |
| Msa0087900 | Msa1366470 | 0.808309 | 3.299111e-50 | -8.615850e-47 |
| Msa0104090 | Msa1366470 | 0.807458 | 5.005943e-50 | -8.615850e-47 |
| Msa0107830 | Msa1366470 | 0.806590 | 7.640985e-50 | -8.615850e-47 |
| Msa1357860 | Msa1366470 | 0.808191 | 3.496297e-50 | -8.615850e-47 |
| Msa1364690 | Msa1366470 | 0.802241 | 6.158159e-49 | -8.615850e-47 |
| Msa1366470 | Msa1375640 | 0.802082 | 6.640849e-49 | -8.615850e-47 |
| Msa1366470 | Msa1387610 | 0.811091 | 8.324482e-51 | -8.615850e-47 |
| Msa1366470 | Msa1398120 | 0.829435 | 5.155024e-55 | -8.615850e-47 |
| Msa1366470 | Msa1402160 | 0.805464 | 1.318294e-49 | -8.615850e-47 |
| Msa1366470 | Msa1427000 | 0.820569 | 6.399569e-53 | -8.615850e-47 |
| Msa1366470 | Msa1431020 | 0.813131 | 2.989472e-51 | -8.615850e-47 |
| Msa1366470 | Msa1438160 | 0.805487 | 1.303778e-49 | -8.615850e-47 |
| Msa1366470 | Msa1439780 | 0.819646 | 1.041249e-52 | -8.615850e-47 |
| Msa1366470 | Msa1449470 | 0.810321 | 1.221886e-50 | -8.615850e-47 |
| Msa1366470 | Msa1459610 | 0.803514 | 3.361316e-49 | -8.615850e-47 |
| Msa0605400 | Msa1366470 | 0.800932 | 1.142932e-48 | -8.615850e-47 |
| Msa0614960 | Msa1366470 | 0.804878 | 1.748596e-49 | -8.615850e-47 |
| Msa0629140 | Msa1366470 | 0.815172 | 1.059105e-51 | -8.615850e-47 |
| Msa0639410 | Msa1366470 | 0.800213 | 1.601743e-48 | -8.615850e-47 |
| Msa0651820 | Msa1366470 | 0.812130 | 4.948809e-51 | -8.615850e-47 |
| Msa0652590 | Msa1366470 | 0.818926 | 1.518874e-52 | -8.615850e-47 |
| Msa0661330 | Msa1366470 | 0.815622 | 8.412744e-52 | -8.615850e-47 |
| Msa0671640 | Msa1366470 | 0.825754 | 3.945286e-54 | -8.615850e-47 |
| Msa0675620 | Msa1366470 | 0.842142 | 3.098229e-58 | -8.615850e-47 |
| Msa0686020 | Msa1366470 | 0.819328 | 1.230558e-52 | -8.615850e-47 |
| Msa0687220 | Msa1366470 | 0.815138 | 1.077856e-51 | -8.615850e-47 |
| Msa0694320 | Msa1366470 | 0.807357 | 5.257331e-50 | -8.615850e-47 |
| Msa0699170 | Msa1366470 | 0.805815 | 1.112278e-49 | -8.615850e-47 |
| Msa0704560 | Msa1366470 | 0.820170 | 7.900833e-53 | -8.615850e-47 |
| Msa0713290 | Msa1366470 | 0.823524 | 1.322573e-53 | -8.615850e-47 |
| Msa0731580 | Msa1366470 | 0.839038 | 2.011968e-57 | -8.615850e-47 |
| Msa0734690 | Msa1366470 | 0.807675 | 4.500862e-50 | -8.615850e-47 |
| Msa0738680 | Msa1366470 | 0.810382 | 1.185223e-50 | -8.615850e-47 |
| Msa0744550 | Msa1366470 | 0.808686 | 2.741528e-50 | -8.615850e-47 |
| Msa0750790 | Msa1366470 | 0.813608 | 2.348149e-51 | -8.615850e-47 |
| Msa0755010 | Msa1366470 | 0.826579 | 2.510153e-54 | -8.615850e-47 |
| Msa0771810 | Msa1366470 | 0.846717 | 1.822923e-59 | -8.615850e-47 |
| Msa0777070 | Msa1366470 | 0.815720 | 8.001165e-52 | -8.615850e-47 |
| Msa0789780 | Msa1366470 | 0.802945 | 4.409320e-49 | -8.615850e-47 |
| Msa0793270 | Msa1366470 | 0.800535 | 1.377271e-48 | -8.615850e-47 |
| Msa0794200 | Msa1366470 | 0.814123 | 1.808175e-51 | -8.615850e-47 |
| Msa0794240 | Msa1366470 | 0.818256 | 2.155497e-52 | -8.615850e-47 |
| Msa0795320 | Msa1366470 | 0.815536 | 8.792094e-52 | -8.615850e-47 |
| Msa0799120 | Msa1366470 | 0.816211 | 6.215344e-52 | -8.615850e-47 |
| Msa0809920 | Msa1366470 | 0.851648 | 7.740590e-61 | -8.615850e-47 |
| Msa0814160 | Msa1366470 | 0.827519 | 1.496197e-54 | -8.615850e-47 |
| Msa0819150 | Msa1366470 | 0.815224 | 1.031688e-51 | -8.615850e-47 |
| Msa0824740 | Msa1366470 | 0.809471 | 1.861889e-50 | -8.615850e-47 |
| Msa0826360 | Msa1366470 | 0.813170 | 2.930597e-51 | -8.615850e-47 |
| Msa0826370 | Msa1366470 | 0.815866 | 7.420586e-52 | -8.615850e-47 |
| Msa0830930 | Msa1366470 | 0.833050 | 6.662463e-56 | -8.615850e-47 |
| Msa0143640 | Msa1366470 | 0.824581 | 7.469113e-54 | -8.615850e-47 |
| Msa0143830 | Msa1366470 | 0.831389 | 1.715948e-55 | -8.615850e-47 |
| Msa0190670 | Msa1366470 | 0.806076 | 9.806658e-50 | -8.615850e-47 |
| Msa0210790 | Msa1366470 | 0.810404 | 1.172222e-50 | -8.615850e-47 |
| Msa0210850 | Msa1366470 | 0.803350 | 3.635031e-49 | -8.615850e-47 |
| Msa1233090 | Msa1366470 | 0.823564 | 1.294086e-53 | -8.615850e-47 |
| Msa1239050 | Msa1366470 | 0.808055 | 3.737000e-50 | -8.615850e-47 |
| Msa1263500 | Msa1366470 | 0.814338 | 1.620970e-51 | -8.615850e-47 |
| Msa1265940 | Msa1366470 | 0.807880 | 4.071137e-50 | -8.615850e-47 |
| Msa1275220 | Msa1366470 | 0.842566 | 2.390940e-58 | -8.615850e-47 |
| Msa1280540 | Msa1366470 | 0.816914 | 4.324395e-52 | -8.615850e-47 |
| Msa1309040 | Msa1366470 | 0.827157 | 1.827120e-54 | -8.615850e-47 |
| Msa1313720 | Msa1366470 | 0.866534 | 2.657494e-65 | -8.615850e-47 |
| Msa1320160 | Msa1366470 | 0.826172 | 3.138419e-54 | -8.615850e-47 |
| Msa0390160 | Msa1366470 | 0.802504 | 5.436259e-49 | -8.615850e-47 |
| Msa0390200 | Msa1366470 | 0.804924 | 1.709956e-49 | -8.615850e-47 |
| Msa0390790 | Msa1366470 | 0.804058 | 2.591996e-49 | -8.615850e-47 |
| Msa0396870 | Msa1366470 | 0.814656 | 1.378577e-51 | -8.615850e-47 |
| Msa0397200 | Msa1366470 | 0.816044 | 6.772732e-52 | -8.615850e-47 |
| Msa0405210 | Msa1366470 | 0.803937 | 2.745862e-49 | -8.615850e-47 |
| Msa0430320 | Msa1366470 | 0.801506 | 8.721225e-49 | -8.615850e-47 |
| Msa0461410 | Msa1366470 | 0.805452 | 1.326109e-49 | -8.615850e-47 |
| Msa0472820 | Msa1366470 | 0.811222 | 7.800406e-51 | -8.615850e-47 |
| Msa0478080 | Msa1366470 | 0.802455 | 5.565162e-49 | -8.615850e-47 |
| Msa0480540 | Msa1366470 | 0.805879 | 1.078762e-49 | -8.615850e-47 |
| Msa1003730 | Msa1366470 | 0.806700 | 7.242895e-50 | -8.615850e-47 |
| Msa1003920 | Msa1366470 | 0.813284 | 2.767060e-51 | -8.615850e-47 |
| Msa1023430 | Msa1366470 | 0.801836 | 7.461625e-49 | -8.615850e-47 |
| Msa1024350 | Msa1366470 | 0.827415 | 1.584595e-54 | -8.615850e-47 |
| Msa1031780 | Msa1366470 | 0.802004 | 6.889632e-49 | -8.615850e-47 |
| Msa1035050 | Msa1366470 | 0.818990 | 1.468915e-52 | -8.615850e-47 |
| Msa1041260 | Msa1366470 | 0.939636 | 9.102453e-100 | -8.615850e-47 |
| Msa1061840 | Msa1366470 | 0.830229 | 3.303150e-55 | -8.615850e-47 |
| Msa1068780 | Msa1366470 | 0.827103 | 1.882077e-54 | -8.615850e-47 |
| Msa1069250 | Msa1366470 | 0.802433 | 5.623609e-49 | -8.615850e-47 |
| Msa1075090 | Msa1366470 | 0.833673 | 4.658696e-56 | -8.615850e-47 |
| Msa1082090 | Msa1366470 | 0.886503 | 3.231853e-72 | -8.615850e-47 |
| Msa0242720 | Msa1366470 | 0.819615 | 1.058462e-52 | -8.615850e-47 |
| Msa0271700 | Msa1366470 | 0.816374 | 5.716024e-52 | -8.615850e-47 |
| Msa0271720 | Msa1366470 | 0.816523 | 5.293828e-52 | -8.615850e-47 |
| Msa0274570 | Msa1366470 | 0.802210 | 6.251099e-49 | -8.615850e-47 |
| Msa0303650 | Msa1366470 | 0.813195 | 2.894103e-51 | -8.615850e-47 |
| Msa0310190 | Msa1366470 | 0.804102 | 2.537376e-49 | -8.615850e-47 |
| Msa0324810 | Msa1366470 | 0.820899 | 5.373417e-53 | -8.615850e-47 |
| Msa0346170 | Msa1366470 | 0.804143 | 2.488771e-49 | -8.615850e-47 |
| Msa0347320 | Msa1366470 | 0.809412 | 1.916571e-50 | -8.615850e-47 |
| Msa1107510 | Msa1366470 | 0.800301 | 1.537001e-48 | -8.615850e-47 |
| Msa1110900 | Msa1366470 | 0.821231 | 4.506444e-53 | -8.615850e-47 |
| Msa1131120 | Msa1366470 | 0.818634 | 1.769789e-52 | -8.615850e-47 |
| Msa1142390 | Msa1366470 | 0.803681 | 3.104558e-49 | -8.615850e-47 |
| Msa1156740 | Msa1366470 | 0.823576 | 1.285986e-53 | -8.615850e-47 |
| Msa1162430 | Msa1366470 | 0.820831 | 5.571131e-53 | -8.615850e-47 |
| Msa1165660 | Msa1366470 | 0.983152 | 5.736968e-157 | -8.615850e-47 |
| Msa1174280 | Msa1366470 | 0.821491 | 3.925491e-53 | -8.615850e-47 |
| Msa1179340 | Msa1366470 | 0.856221 | 3.724935e-62 | -8.615850e-47 |
| Msa1211610 | Msa1366470 | 0.805204 | 1.494264e-49 | -8.615850e-47 |
| Msa1218190 | Msa1366470 | 0.800278 | 1.553133e-48 | -8.615850e-47 |
| Msa1223560 | Msa1366470 | 0.810535 | 1.098213e-50 | -8.615850e-47 |
| Msa0489370 | Msa1366470 | 0.809893 | 1.510343e-50 | -8.615850e-47 |
| Msa0493870 | Msa1366470 | 0.815198 | 1.045164e-51 | -8.615850e-47 |
| Msa0500440 | Msa1366470 | 0.808260 | 3.379600e-50 | -8.615850e-47 |
| Msa0508160 | Msa1366470 | 0.805099 | 1.571836e-49 | -8.615850e-47 |
| Msa0526880 | Msa1366470 | 0.804614 | 1.984676e-49 | -8.615850e-47 |
| Msa0537210 | Msa1366470 | 0.814046 | 1.880598e-51 | -8.615850e-47 |
| Msa0546880 | Msa1366470 | 0.800028 | 1.746564e-48 | -8.615850e-47 |
| Msa0561110 | Msa1366470 | 0.810710 | 1.006759e-50 | -8.615850e-47 |
| Msa0566530 | Msa1366470 | 0.812360 | 4.408174e-51 | -8.615850e-47 |
| Msa0580840 | Msa1366470 | 0.810257 | 1.261255e-50 | -8.615850e-47 |
| Msa0588880 | Msa1366470 | 0.800277 | 1.554537e-48 | -8.615850e-47 |
| Msa0589000 | Msa1366470 | 0.800013 | 1.759104e-48 | -8.615850e-47 |
| Msa0589060 | Msa1366470 | 0.809136 | 2.196895e-50 | -8.615850e-47 |
| Msa0597170 | Msa1366470 | 0.830825 | 2.361045e-55 | -8.615850e-47 |
| Msa0850480 | Msa1366470 | 0.838684 | 2.484323e-57 | -8.615850e-47 |
| Msa0854840 | Msa1366470 | 0.815435 | 9.257137e-52 | -8.615850e-47 |
| Msa0868180 | Msa1366470 | 0.819513 | 1.116737e-52 | -8.615850e-47 |
| Msa0869660 | Msa1366470 | 0.823115 | 1.648167e-53 | -8.615850e-47 |
| Msa0874750 | Msa1366470 | 0.846495 | 2.094923e-59 | -8.615850e-47 |
| Msa0921790 | Msa1366470 | 0.823730 | 1.183332e-53 | -8.615850e-47 |
| Msa0960580 | Msa1366470 | 0.837409 | 5.287313e-57 | -8.615850e-47 |
| Msa0976400 | Msa1366470 | 0.837055 | 6.513228e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366470 | MtrunA17_Chr7g0269521 | 96.277 | 564 | 21 | 0 | 1 | 564 | 1 | 564 | 0.0 | 1101 |
| Msa1366470 | MtrunA17_Chr1g0175661 | 74.067 | 563 | 142 | 3 | 1 | 563 | 1 | 559 | 0.0 | 854 |
| Msa1366470 | MtrunA17_Chr1g0195301 | 74.159 | 565 | 135 | 4 | 1 | 563 | 1 | 556 | 0.0 | 854 |
| Msa1366470 | MtrunA17_Chr1g0195321 | 74.159 | 565 | 135 | 4 | 1 | 563 | 1 | 556 | 0.0 | 854 |
| Msa1366470 | MtrunA17_Chr1g0195331 | 73.982 | 565 | 136 | 4 | 1 | 563 | 1 | 556 | 0.0 | 851 |
| Msa1366470 | MtrunA17_Chr1g0195351 | 73.451 | 565 | 137 | 5 | 1 | 563 | 1 | 554 | 0.0 | 842 |
| Msa1366470 | MtrunA17_Chr7g0269511 | 67.228 | 534 | 167 | 4 | 34 | 563 | 36 | 565 | 0.0 | 736 |
| Msa1366470 | MtrunA17_Chr7g0269531 | 63.074 | 566 | 199 | 8 | 1 | 562 | 6 | 565 | 0.0 | 712 |
| Msa1366470 | MtrunA17_Chr1g0192331 | 50.180 | 556 | 241 | 8 | 10 | 562 | 6 | 528 | 0.0 | 525 |
| Msa1366470 | MtrunA17_Chr8g0354911 | 50.276 | 543 | 242 | 9 | 40 | 562 | 78 | 612 | 3.92e-175 | 509 |
| Msa1366470 | MtrunA17_Chr1g0195311 | 83.396 | 265 | 44 | 0 | 299 | 563 | 51 | 315 | 4.05e-168 | 479 |
| Msa1366470 | MtrunA17_Chr3g0080381 | 48.155 | 542 | 259 | 8 | 40 | 563 | 92 | 629 | 3.92e-167 | 489 |
| Msa1366470 | MtrunA17_Chr7g0269541 | 45.259 | 559 | 246 | 10 | 10 | 562 | 52 | 556 | 1.93e-145 | 431 |
| Msa1366470 | MtrunA17_Chr4g0011771 | 46.053 | 532 | 228 | 13 | 40 | 562 | 32 | 513 | 2.13e-139 | 414 |
| Msa1366470 | MtrunA17_Chr4g0011791 | 45.028 | 533 | 233 | 15 | 37 | 562 | 30 | 509 | 7.74e-132 | 394 |
| Msa1366470 | MtrunA17_Chr8g0391311 | 49.650 | 429 | 196 | 7 | 138 | 562 | 129 | 541 | 3.08e-131 | 394 |
| Msa1366470 | MtrunA17_Chr8g0391291 | 49.650 | 429 | 196 | 7 | 138 | 562 | 127 | 539 | 1.81e-130 | 392 |
| Msa1366470 | MtrunA17_Chr1g0147051 | 40.550 | 582 | 300 | 13 | 7 | 562 | 46 | 607 | 7.91e-128 | 387 |
| Msa1366470 | MtrunA17_Chr8g0345281 | 44.856 | 486 | 234 | 9 | 89 | 562 | 126 | 589 | 1.12e-126 | 384 |
| Msa1366470 | MtrunA17_Chr2g0302021 | 45.759 | 448 | 204 | 7 | 116 | 562 | 116 | 525 | 1.08e-125 | 379 |
| Msa1366470 | MtrunA17_Chr4g0069881 | 42.000 | 500 | 246 | 9 | 65 | 562 | 78 | 535 | 2.42e-125 | 378 |
| Msa1366470 | MtrunA17_Chr4g0069841 | 43.763 | 473 | 225 | 9 | 96 | 564 | 83 | 518 | 7.42e-124 | 374 |
| Msa1366470 | MtrunA17_Chr7g0233831 | 44.586 | 471 | 217 | 11 | 99 | 562 | 122 | 555 | 3.28e-121 | 368 |
| Msa1366470 | MtrunA17_Chr7g0233771 | 44.328 | 476 | 211 | 11 | 99 | 562 | 121 | 554 | 2.18e-120 | 366 |
| Msa1366470 | MtrunA17_Chr8g0354901 | 40.410 | 537 | 277 | 13 | 37 | 562 | 77 | 581 | 1.40e-119 | 365 |
| Msa1366470 | MtrunA17_Chr3g0126771 | 43.763 | 473 | 240 | 10 | 98 | 562 | 143 | 597 | 1.51e-119 | 365 |
| Msa1366470 | MtrunA17_Chr7g0233801 | 40.223 | 537 | 271 | 12 | 39 | 562 | 54 | 553 | 5.89e-119 | 362 |
| Msa1366470 | MtrunA17_Chr7g0272141 | 44.907 | 432 | 200 | 9 | 136 | 562 | 144 | 542 | 1.12e-118 | 361 |
| Msa1366470 | MtrunA17_Chr4g0011751 | 53.846 | 312 | 143 | 1 | 252 | 562 | 178 | 489 | 7.81e-118 | 357 |
| Msa1366470 | MtrunA17_Chr3g0080391 | 42.612 | 467 | 239 | 8 | 96 | 562 | 137 | 574 | 1.13e-117 | 360 |
| Msa1366470 | MtrunA17_Chr4g0018371 | 39.850 | 532 | 279 | 10 | 40 | 562 | 40 | 539 | 5.13e-117 | 357 |
| Msa1366470 | MtrunA17_Chr4g0069861 | 43.619 | 431 | 210 | 6 | 135 | 564 | 121 | 519 | 1.72e-115 | 352 |
| Msa1366470 | MtrunA17_Chr3g0090091 | 39.850 | 532 | 272 | 12 | 40 | 562 | 36 | 528 | 1.40e-114 | 350 |
| Msa1366470 | MtrunA17_Chr3g0079361 | 51.652 | 333 | 154 | 4 | 232 | 562 | 200 | 527 | 5.92e-113 | 346 |
| Msa1366470 | MtrunA17_Chr4g0069891 | 42.094 | 468 | 249 | 7 | 98 | 562 | 145 | 593 | 8.18e-113 | 348 |
| Msa1366470 | MtrunA17_Chr3g0079341 | 51.652 | 333 | 154 | 4 | 232 | 562 | 200 | 527 | 1.27e-112 | 345 |
| Msa1366470 | MtrunA17_Chr3g0079351 | 51.351 | 333 | 155 | 4 | 232 | 562 | 200 | 527 | 5.13e-112 | 343 |
| Msa1366470 | MtrunA17_Chr8g0345211 | 37.616 | 537 | 284 | 14 | 37 | 558 | 78 | 578 | 5.72e-104 | 325 |
| Msa1366470 | MtrunA17_Chr1g0194091 | 38.866 | 476 | 265 | 10 | 99 | 562 | 108 | 569 | 7.21e-103 | 322 |
| Msa1366470 | MtrunA17_Chr1g0194081 | 35.539 | 529 | 320 | 7 | 39 | 562 | 51 | 563 | 1.03e-101 | 318 |
| Msa1366470 | MtrunA17_Chr2g0302001 | 55.894 | 263 | 113 | 1 | 300 | 562 | 178 | 437 | 1.07e-101 | 314 |
| Msa1366470 | MtrunA17_Chr8g0384121 | 35.883 | 549 | 312 | 13 | 24 | 561 | 44 | 563 | 7.29e-99 | 311 |
| Msa1366470 | MtrunA17_Chr7g0270691 | 34.698 | 562 | 336 | 11 | 9 | 563 | 13 | 550 | 2.86e-98 | 309 |
| Msa1366470 | MtrunA17_Chr7g0272151 | 33.996 | 553 | 307 | 12 | 37 | 561 | 60 | 582 | 3.05e-95 | 302 |
| Msa1366470 | MtrunA17_Chr2g0301931 | 51.064 | 282 | 134 | 2 | 281 | 562 | 15 | 292 | 3.82e-94 | 290 |
| Msa1366470 | MtrunA17_Chr1g0192311 | 37.753 | 445 | 216 | 6 | 136 | 558 | 161 | 566 | 4.18e-94 | 299 |
| Msa1366470 | MtrunA17_Chr1g0192281 | 37.753 | 445 | 216 | 6 | 136 | 558 | 161 | 566 | 4.18e-94 | 299 |
| Msa1366470 | MtrunA17_Chr1g0192321 | 38.902 | 437 | 245 | 8 | 136 | 561 | 157 | 582 | 8.46e-94 | 298 |
| Msa1366470 | MtrunA17_Chr4g0000121 | 38.642 | 427 | 237 | 8 | 136 | 558 | 148 | 553 | 1.71e-92 | 295 |
| Msa1366470 | MtrunA17_Chr3g0129921 | 34.545 | 550 | 300 | 15 | 37 | 561 | 49 | 563 | 1.44e-91 | 292 |
| Msa1366470 | MtrunA17_Chr7g0234711 | 59.111 | 225 | 90 | 2 | 340 | 562 | 45 | 269 | 7.67e-91 | 280 |
| Msa1366470 | MtrunA17_Chr1g0192301 | 38.084 | 428 | 240 | 8 | 136 | 559 | 166 | 572 | 2.00e-90 | 290 |
| Msa1366470 | MtrunA17_Chr7g0270661 | 36.674 | 469 | 288 | 5 | 96 | 562 | 105 | 566 | 9.89e-89 | 285 |
| Msa1366470 | MtrunA17_Chr7g0270671 | 36.674 | 469 | 288 | 5 | 96 | 562 | 105 | 566 | 9.89e-89 | 285 |
| Msa1366470 | MtrunA17_Chr7g0270651 | 33.145 | 531 | 343 | 6 | 37 | 562 | 43 | 566 | 2.28e-88 | 284 |
| Msa1366470 | MtrunA17_Chr7g0270631 | 36.403 | 467 | 290 | 3 | 99 | 564 | 96 | 556 | 4.41e-86 | 289 |
| Msa1366470 | MtrunA17_Chr7g0270631 | 34.304 | 481 | 289 | 8 | 99 | 562 | 644 | 1114 | 9.06e-72 | 249 |
| Msa1366470 | MtrunA17_Chr2g0295531 | 32.437 | 558 | 322 | 13 | 18 | 558 | 23 | 542 | 7.26e-85 | 276 |
| Msa1366470 | MtrunA17_Chr4g0067601 | 34.404 | 436 | 256 | 7 | 135 | 561 | 157 | 571 | 4.01e-82 | 268 |
| Msa1366470 | MtrunA17_Chr4g0067611 | 35.240 | 437 | 251 | 8 | 135 | 561 | 157 | 571 | 4.46e-82 | 268 |
| Msa1366470 | MtrunA17_Chr5g0437831 | 42.262 | 336 | 177 | 7 | 234 | 562 | 58 | 383 | 1.63e-81 | 260 |
| Msa1366470 | MtrunA17_Chr2g0295551 | 36.136 | 440 | 238 | 9 | 135 | 561 | 154 | 563 | 2.45e-79 | 260 |
| Msa1366470 | MtrunA17_Chr8g0380581 | 40.673 | 327 | 184 | 5 | 234 | 558 | 54 | 372 | 1.58e-78 | 252 |
| Msa1366470 | MtrunA17_Chr2g0334111 | 41.587 | 315 | 166 | 6 | 250 | 562 | 25 | 323 | 1.46e-74 | 240 |
| Msa1366470 | MtrunA17_Chr7g0268241 | 42.222 | 315 | 166 | 7 | 250 | 562 | 50 | 350 | 8.19e-73 | 236 |
| Msa1366470 | MtrunA17_Chr2g0295541 | 32.397 | 463 | 255 | 7 | 135 | 561 | 154 | 594 | 2.92e-70 | 236 |
| Msa1366470 | MtrunA17_Chr7g0271381 | 28.496 | 565 | 344 | 15 | 15 | 562 | 35 | 556 | 1.87e-66 | 226 |
| Msa1366470 | MtrunA17_Chr1g0194311 | 36.656 | 311 | 168 | 8 | 252 | 551 | 76 | 368 | 7.90e-55 | 189 |
| Msa1366470 | MtrunA17_Chr6g0487101 | 38.033 | 305 | 161 | 7 | 258 | 551 | 93 | 380 | 2.81e-53 | 186 |
| Msa1366470 | MtrunA17_Chr7g0258341 | 33.974 | 312 | 182 | 6 | 250 | 551 | 90 | 387 | 9.24e-52 | 182 |
| Msa1366470 | MtrunA17_Chr6g0453551 | 33.648 | 318 | 182 | 8 | 249 | 553 | 5 | 306 | 9.64e-52 | 179 |
| Msa1366470 | MtrunA17_Chr8g0389771 | 36.306 | 314 | 170 | 8 | 251 | 551 | 81 | 377 | 6.49e-51 | 179 |
| Msa1366470 | MtrunA17_Chr6g0466951 | 36.655 | 281 | 152 | 6 | 250 | 525 | 69 | 328 | 1.42e-49 | 175 |
| Msa1366470 | MtrunA17_Chr6g0466961 | 37.011 | 281 | 151 | 6 | 250 | 525 | 40 | 299 | 3.00e-49 | 173 |
| Msa1366470 | MtrunA17_Chr7g0217941 | 33.648 | 318 | 182 | 9 | 249 | 553 | 5 | 306 | 3.89e-49 | 172 |
| Msa1366470 | MtrunA17_Chr8g0391261 | 56.204 | 137 | 59 | 1 | 427 | 562 | 30 | 166 | 5.53e-48 | 164 |
| Msa1366470 | MtrunA17_Chr1g0161731 | 33.333 | 315 | 183 | 7 | 245 | 551 | 44 | 339 | 4.48e-45 | 162 |
| Msa1366470 | MtrunA17_Chr5g0446301 | 33.981 | 309 | 173 | 8 | 256 | 551 | 67 | 357 | 1.25e-44 | 162 |
| Msa1366470 | MtrunA17_Chr2g0294321 | 31.677 | 322 | 191 | 8 | 240 | 552 | 46 | 347 | 4.96e-43 | 157 |
| Msa1366470 | MtrunA17_Chr4g0070051 | 30.655 | 336 | 195 | 12 | 230 | 551 | 32 | 343 | 2.05e-41 | 152 |
| Msa1366470 | MtrunA17_Chr7g0265201 | 29.619 | 341 | 202 | 8 | 227 | 551 | 67 | 385 | 3.16e-40 | 150 |
| Msa1366470 | MtrunA17_Chr5g0399221 | 30.000 | 320 | 195 | 7 | 247 | 554 | 60 | 362 | 1.25e-39 | 148 |
| Msa1366470 | MtrunA17_Chr2g0295851 | 30.841 | 321 | 182 | 11 | 242 | 552 | 47 | 337 | 2.62e-37 | 141 |
| Msa1366470 | MtrunA17_Chr5g0440871 | 32.573 | 307 | 183 | 7 | 246 | 551 | 35 | 318 | 1.09e-35 | 136 |
| Msa1366470 | MtrunA17_Chr2g0299431 | 36.885 | 244 | 122 | 8 | 234 | 464 | 40 | 264 | 8.14e-33 | 127 |
| Msa1366470 | MtrunA17_Chr8g0351871 | 29.874 | 318 | 187 | 9 | 248 | 553 | 31 | 324 | 2.55e-31 | 124 |
| Msa1366470 | MtrunA17_Chr4g0037751 | 29.524 | 315 | 191 | 9 | 247 | 551 | 68 | 361 | 5.88e-31 | 124 |
| Msa1366470 | MtrunA17_Chr5g0437821 | 41.912 | 136 | 76 | 2 | 366 | 499 | 4 | 138 | 8.54e-31 | 117 |
| Msa1366470 | MtrunA17_Chr5g0420831 | 30.172 | 348 | 203 | 12 | 222 | 551 | 36 | 361 | 1.16e-29 | 120 |
| Msa1366470 | MtrunA17_Chr4g0025841 | 31.873 | 251 | 151 | 5 | 246 | 496 | 33 | 263 | 2.01e-28 | 114 |
| Msa1366470 | MtrunA17_Chr6g0459781 | 37.640 | 178 | 92 | 7 | 249 | 414 | 12 | 182 | 1.59e-26 | 107 |
| Msa1366470 | MtrunA17_Chr7g0265161 | 32.778 | 180 | 88 | 4 | 319 | 493 | 6 | 157 | 9.94e-23 | 97.4 |
| Msa1366470 | MtrunA17_Chr5g0440901 | 35.526 | 152 | 88 | 2 | 345 | 496 | 1 | 142 | 1.10e-21 | 91.7 |
| Msa1366470 | MtrunA17_Chr5g0440891 | 38.650 | 163 | 88 | 5 | 246 | 407 | 44 | 195 | 5.72e-21 | 91.3 |
| Msa1366470 | MtrunA17_Chr6g0459791 | 41.129 | 124 | 61 | 3 | 429 | 551 | 4 | 116 | 5.78e-20 | 85.9 |
| Msa1366470 | MtrunA17_Chr2g0314691 | 30.332 | 211 | 135 | 5 | 341 | 551 | 3 | 201 | 2.07e-19 | 87.0 |
| Msa1366470 | MtrunA17_Chr6g0460141 | 39.370 | 127 | 69 | 5 | 289 | 407 | 13 | 139 | 1.57e-17 | 79.7 |
| Msa1366470 | MtrunA17_Chr8g0391281 | 36.041 | 197 | 107 | 7 | 141 | 334 | 130 | 310 | 2.44e-17 | 83.2 |
| Msa1366470 | MtrunA17_Chr4g0073911 | 30.488 | 164 | 104 | 4 | 280 | 436 | 35 | 195 | 3.97e-14 | 72.4 |
| Msa1366470 | MtrunA17_Chr7g0234731 | 38.614 | 101 | 57 | 2 | 232 | 332 | 219 | 314 | 1.77e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366470 | AT4G02330.1 | 59.478 | 575 | 204 | 11 | 8 | 563 | 8 | 572 | 0.0 | 667 |
| Msa1366470 | AT1G02810.1 | 56.627 | 581 | 221 | 8 | 6 | 563 | 6 | 578 | 0.0 | 649 |
| Msa1366470 | AT2G47550.1 | 56.283 | 565 | 225 | 8 | 11 | 563 | 5 | 559 | 0.0 | 629 |
| Msa1366470 | AT3G10720.2 | 48.423 | 539 | 258 | 8 | 40 | 563 | 83 | 616 | 3.85e-172 | 501 |
| Msa1366470 | AT5G04970.1 | 46.154 | 546 | 260 | 9 | 40 | 563 | 88 | 621 | 2.27e-161 | 474 |
| Msa1366470 | AT2G45220.1 | 42.049 | 566 | 268 | 12 | 1 | 562 | 2 | 511 | 5.95e-132 | 395 |
| Msa1366470 | AT5G51490.1 | 42.011 | 557 | 260 | 15 | 24 | 562 | 25 | 536 | 4.34e-129 | 388 |
| Msa1366470 | AT3G60730.1 | 44.977 | 438 | 218 | 7 | 134 | 562 | 96 | 519 | 2.10e-127 | 383 |
| Msa1366470 | AT1G11580.1 | 48.471 | 425 | 187 | 6 | 137 | 558 | 158 | 553 | 1.31e-126 | 383 |
| Msa1366470 | AT1G11580.2 | 48.471 | 425 | 187 | 6 | 137 | 558 | 179 | 574 | 1.83e-126 | 383 |
| Msa1366470 | AT1G23200.1 | 40.000 | 580 | 280 | 14 | 8 | 562 | 18 | 554 | 9.72e-126 | 380 |
| Msa1366470 | AT1G53830.1 | 41.304 | 552 | 287 | 9 | 25 | 558 | 51 | 583 | 3.31e-124 | 377 |
| Msa1366470 | AT2G26440.1 | 42.243 | 535 | 273 | 10 | 38 | 562 | 39 | 547 | 5.73e-124 | 375 |
| Msa1366470 | AT3G10720.1 | 63.077 | 260 | 96 | 0 | 304 | 563 | 1 | 260 | 8.97e-124 | 365 |
| Msa1366470 | AT4G33220.1 | 45.062 | 486 | 219 | 10 | 99 | 564 | 68 | 525 | 1.54e-123 | 374 |
| Msa1366470 | AT3G43270.1 | 55.287 | 331 | 141 | 4 | 234 | 563 | 202 | 526 | 4.93e-123 | 372 |
| Msa1366470 | AT3G05620.1 | 45.370 | 432 | 200 | 5 | 131 | 562 | 146 | 541 | 1.06e-122 | 372 |
| Msa1366470 | AT3G14310.1 | 40.687 | 553 | 301 | 9 | 27 | 562 | 50 | 592 | 4.13e-122 | 372 |
| Msa1366470 | AT5G51500.1 | 41.016 | 551 | 273 | 15 | 26 | 562 | 28 | 540 | 9.53e-121 | 367 |
| Msa1366470 | AT3G49220.1 | 46.259 | 441 | 208 | 8 | 131 | 564 | 180 | 598 | 5.16e-120 | 367 |
| Msa1366470 | AT5G53370.1 | 43.908 | 476 | 227 | 10 | 98 | 562 | 139 | 585 | 9.76e-120 | 366 |
| Msa1366470 | AT3G49220.3 | 46.259 | 441 | 208 | 8 | 131 | 564 | 225 | 643 | 1.45e-119 | 367 |
| Msa1366470 | AT4G33220.2 | 51.791 | 363 | 159 | 4 | 203 | 564 | 57 | 404 | 2.04e-119 | 359 |
| Msa1366470 | AT5G53370.2 | 43.908 | 476 | 227 | 10 | 98 | 562 | 175 | 621 | 3.02e-119 | 366 |
| Msa1366470 | AT5G04960.1 | 38.321 | 548 | 282 | 15 | 30 | 558 | 50 | 560 | 5.02e-118 | 361 |
| Msa1366470 | AT4G02300.1 | 38.998 | 559 | 297 | 12 | 6 | 562 | 16 | 532 | 1.82e-115 | 353 |
| Msa1366470 | AT2G26450.1 | 38.806 | 536 | 284 | 13 | 37 | 562 | 110 | 611 | 5.65e-115 | 354 |
| Msa1366470 | AT3G10710.1 | 39.147 | 539 | 283 | 15 | 29 | 562 | 63 | 561 | 3.99e-114 | 350 |
| Msa1366470 | AT4G02320.1 | 41.226 | 473 | 248 | 10 | 90 | 558 | 68 | 514 | 9.60e-113 | 345 |
| Msa1366470 | AT3G59010.1 | 45.853 | 434 | 197 | 10 | 134 | 563 | 130 | 529 | 1.06e-112 | 346 |
| Msa1366470 | AT4G00190.1 | 38.491 | 530 | 250 | 14 | 39 | 558 | 7 | 470 | 1.85e-112 | 343 |
| Msa1366470 | AT1G53840.1 | 40.574 | 488 | 249 | 12 | 82 | 556 | 122 | 581 | 6.57e-111 | 343 |
| Msa1366470 | AT2G43050.1 | 41.414 | 495 | 235 | 12 | 72 | 563 | 75 | 517 | 7.04e-110 | 338 |
| Msa1366470 | AT3G05610.1 | 38.347 | 472 | 257 | 5 | 99 | 563 | 122 | 566 | 1.35e-106 | 334 |
| Msa1366470 | AT4G33230.1 | 36.197 | 547 | 292 | 14 | 37 | 562 | 96 | 606 | 1.10e-105 | 330 |
| Msa1366470 | AT3G47400.1 | 41.453 | 468 | 245 | 8 | 98 | 562 | 153 | 594 | 3.03e-105 | 328 |
| Msa1366470 | AT5G27870.1 | 39.041 | 438 | 225 | 8 | 135 | 562 | 157 | 562 | 2.42e-102 | 325 |
| Msa1366470 | AT3G06830.1 | 40.930 | 430 | 234 | 7 | 134 | 558 | 150 | 564 | 1.14e-100 | 316 |
| Msa1366470 | AT5G20860.2 | 46.835 | 316 | 158 | 4 | 250 | 562 | 230 | 538 | 5.13e-98 | 308 |
| Msa1366470 | AT5G49180.1 | 40.047 | 427 | 240 | 5 | 134 | 559 | 156 | 567 | 1.08e-97 | 308 |
| Msa1366470 | AT3G27980.1 | 40.515 | 427 | 218 | 5 | 137 | 562 | 106 | 497 | 2.77e-97 | 305 |
| Msa1366470 | AT1G11590.1 | 40.603 | 431 | 222 | 6 | 134 | 562 | 126 | 524 | 9.05e-96 | 302 |
| Msa1366470 | AT4G03930.1 | 40.371 | 431 | 223 | 6 | 134 | 562 | 126 | 524 | 5.10e-95 | 300 |
| Msa1366470 | AT3G14300.1 | 41.844 | 423 | 215 | 9 | 135 | 553 | 565 | 960 | 8.04e-95 | 311 |
| Msa1366470 | AT5G09760.1 | 47.452 | 314 | 152 | 6 | 246 | 550 | 237 | 546 | 1.32e-91 | 292 |
| Msa1366470 | AT5G09760.2 | 47.452 | 314 | 152 | 6 | 246 | 550 | 263 | 572 | 2.24e-91 | 292 |
| Msa1366470 | AT1G11370.1 | 50.000 | 258 | 126 | 1 | 236 | 493 | 32 | 286 | 2.87e-87 | 272 |
| Msa1366470 | AT4G15980.1 | 42.988 | 328 | 183 | 2 | 232 | 558 | 374 | 698 | 4.58e-85 | 279 |
| Msa1366470 | AT4G15980.2 | 42.988 | 328 | 183 | 2 | 232 | 558 | 384 | 708 | 9.06e-85 | 278 |
| Msa1366470 | AT5G64640.1 | 45.062 | 324 | 158 | 7 | 246 | 555 | 285 | 602 | 2.02e-83 | 272 |
| Msa1366470 | AT5G20860.1 | 41.060 | 302 | 140 | 3 | 250 | 548 | 230 | 496 | 1.29e-74 | 246 |
| Msa1366470 | AT2G47030.1 | 41.587 | 315 | 177 | 4 | 251 | 562 | 278 | 588 | 1.14e-73 | 246 |
| Msa1366470 | AT2G47040.1 | 31.504 | 565 | 337 | 14 | 37 | 562 | 42 | 595 | 7.16e-71 | 238 |
| Msa1366470 | AT3G62170.1 | 40.952 | 315 | 179 | 4 | 251 | 562 | 278 | 588 | 4.36e-70 | 236 |
| Msa1366470 | AT5G19730.1 | 35.987 | 314 | 173 | 7 | 249 | 551 | 85 | 381 | 1.67e-52 | 184 |
| Msa1366470 | AT1G05310.1 | 35.577 | 312 | 177 | 6 | 250 | 551 | 91 | 388 | 7.19e-52 | 182 |
| Msa1366470 | AT2G36710.1 | 34.000 | 350 | 195 | 8 | 214 | 556 | 70 | 390 | 7.66e-52 | 183 |
| Msa1366470 | AT3G17060.1 | 30.141 | 355 | 217 | 8 | 209 | 552 | 3 | 337 | 1.96e-50 | 177 |
| Msa1366470 | AT2G19150.1 | 32.515 | 326 | 190 | 8 | 243 | 558 | 34 | 339 | 1.10e-48 | 172 |
| Msa1366470 | AT3G29090.1 | 33.230 | 322 | 184 | 9 | 244 | 551 | 1 | 305 | 2.70e-48 | 171 |
| Msa1366470 | AT2G21610.1 | 33.003 | 303 | 183 | 6 | 249 | 551 | 50 | 332 | 5.06e-48 | 171 |
| Msa1366470 | AT2G21610.2 | 33.003 | 303 | 183 | 6 | 249 | 551 | 55 | 337 | 8.37e-48 | 171 |
| Msa1366470 | AT2G36700.1 | 31.494 | 308 | 191 | 5 | 249 | 551 | 41 | 333 | 2.47e-46 | 166 |
| Msa1366470 | AT5G18990.1 | 34.505 | 313 | 176 | 7 | 250 | 551 | 29 | 323 | 5.54e-46 | 165 |
| Msa1366470 | AT5G55590.1 | 32.704 | 318 | 185 | 8 | 246 | 551 | 78 | 378 | 9.87e-44 | 160 |
| Msa1366470 | AT3G24130.1 | 35.069 | 288 | 160 | 6 | 250 | 526 | 34 | 305 | 5.66e-43 | 157 |
| Msa1366470 | AT5G07430.1 | 32.710 | 321 | 191 | 8 | 239 | 551 | 52 | 355 | 1.23e-41 | 154 |
| Msa1366470 | AT5G26810.1 | 32.727 | 330 | 192 | 10 | 237 | 551 | 19 | 333 | 2.84e-41 | 152 |
| Msa1366470 | AT5G55590.2 | 34.221 | 263 | 146 | 7 | 246 | 496 | 78 | 325 | 6.24e-41 | 151 |
| Msa1366470 | AT5G47500.1 | 30.696 | 316 | 190 | 7 | 248 | 551 | 59 | 357 | 1.82e-39 | 148 |
| Msa1366470 | AT2G47280.1 | 30.818 | 318 | 191 | 8 | 246 | 553 | 31 | 329 | 2.86e-39 | 147 |
| Msa1366470 | AT2G19150.2 | 33.712 | 264 | 147 | 7 | 243 | 496 | 34 | 279 | 3.14e-39 | 145 |
| Msa1366470 | AT5G07420.1 | 31.776 | 321 | 194 | 8 | 239 | 551 | 52 | 355 | 7.30e-38 | 143 |
| Msa1366470 | AT5G61680.1 | 33.119 | 311 | 182 | 10 | 248 | 551 | 67 | 358 | 4.23e-37 | 141 |
| Msa1366470 | AT1G44980.1 | 40.984 | 183 | 105 | 1 | 234 | 416 | 62 | 241 | 1.10e-34 | 131 |
| Msa1366470 | AT1G69940.1 | 28.483 | 323 | 204 | 10 | 238 | 551 | 51 | 355 | 7.27e-34 | 132 |
| Msa1366470 | AT5G07410.1 | 28.829 | 333 | 208 | 11 | 230 | 551 | 41 | 355 | 9.67e-34 | 132 |
Find 96 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAACAGTTGACTTCATATT+TGG | 0.153800 | tig0018459:+58071 | Msa1366470:CDS |
| CTACTAGCAACCGTGTTATT+TGG | 0.232079 | tig0018459:-56453 | None:intergenic |
| AACCAACAAACTTGTTTAGA+TGG | 0.297504 | tig0018459:+56078 | Msa1366470:CDS |
| TATCGCGAATGCGACATCTA+TGG | 0.300622 | tig0018459:+58050 | Msa1366470:CDS |
| CAAATATCATGGTCACAAAA+TGG | 0.308214 | tig0018459:+56228 | Msa1366470:CDS |
| TATAAAAGCTAGTGATGATT+TGG | 0.325850 | tig0018459:+58226 | Msa1366470:CDS |
| AAATTCTTCACCTTGAGAAA+TGG | 0.336161 | tig0018459:-56028 | None:intergenic |
| GTACTCAAGGACAGTTTATA+TGG | 0.338879 | tig0018459:+58298 | Msa1366470:CDS |
| ATCCTTCTGGTTGGCGTGAA+TGG | 0.350213 | tig0018459:+58345 | Msa1366470:CDS |
| GACAGTTTGATAAATCCTTC+TGG | 0.365166 | tig0018459:+58332 | Msa1366470:CDS |
| AGTCAATTACGGTGCCGTTT+TGG | 0.368845 | tig0018459:-55807 | None:intergenic |
| AGTTTAAGAATTTGCGGGAT+TGG | 0.369826 | tig0018459:-55861 | None:intergenic |
| TTGTCCACTGCTGGGAAGTC+GGG | 0.371249 | tig0018459:-58132 | None:intergenic |
| GTTTAAGAATTTGCGGGATT+GGG | 0.373531 | tig0018459:-55860 | None:intergenic |
| TAAAATTTCCACTTCCATCT+TGG | 0.392759 | tig0018459:-56401 | None:intergenic |
| GAATTTGCGGGATTGGGATA+AGG | 0.395401 | tig0018459:-55854 | None:intergenic |
| AATTCTTCACCTTGAGAAAT+GGG | 0.399331 | tig0018459:-56027 | None:intergenic |
| TTCGAAGCTGCAGCTGTAGA+AGG | 0.400981 | tig0018459:-57985 | None:intergenic |
| AACCATCTAAACAAGTTTGT+TGG | 0.402908 | tig0018459:-56080 | None:intergenic |
| AGCGTTGAATTGTCCACTGC+TGG | 0.412036 | tig0018459:-58141 | None:intergenic |
| AGAAAAGCAGAGTGTAAGAA+TGG | 0.413989 | tig0018459:-55662 | None:intergenic |
| ATCCCTAGCTGATAATTCTA+AGG | 0.417042 | tig0018459:+55720 | Msa1366470:CDS |
| GGTGATCATAATGTTATTGA+TGG | 0.424519 | tig0018459:+56591 | Msa1366470:CDS |
| TGGTTTAATTACCGCATCTT+CGG | 0.427646 | tig0018459:+56098 | Msa1366470:CDS |
| CGTTTCTTACCGCGACTGCT+TGG | 0.433166 | tig0018459:-57947 | None:intergenic |
| TACTAAGTTTAAGAATTTGC+GGG | 0.437844 | tig0018459:-55866 | None:intergenic |
| ATACTAGTATGAGAGTGAAT+TGG | 0.446368 | tig0018459:+58432 | Msa1366470:CDS |
| ACGTTCAATTCAGCAACATT+TGG | 0.449707 | tig0018459:+56621 | Msa1366470:CDS |
| AACAATTGATGAAAGTGTTA+CGG | 0.454527 | tig0018459:+56356 | Msa1366470:CDS |
| GATGATTTGGCTCCGTTGAT+TGG | 0.458849 | tig0018459:+58239 | Msa1366470:CDS |
| AACGGCACCGTAATTGACTA+TGG | 0.463464 | tig0018459:+55811 | Msa1366470:CDS |
| CTGGTTGGCGTGAATGGAGT+GGG | 0.466052 | tig0018459:+58351 | Msa1366470:CDS |
| TCTTTAAGAGCGGAAATTGT+GGG | 0.468747 | tig0018459:-55925 | None:intergenic |
| GCGACTGCTTGGTGTTTGCT+TGG | 0.470992 | tig0018459:-57936 | None:intergenic |
| GTACTAAGTTTAAGAATTTG+CGG | 0.475112 | tig0018459:-55867 | None:intergenic |
| GTGGACTCGCAGATTGTTTG+TGG | 0.483498 | tig0018459:-55748 | None:intergenic |
| GATAGTTGGTTGCCTCAAAC+TGG | 0.484973 | tig0018459:+58521 | Msa1366470:CDS |
| TATGCAGAGTATAATAATAC+AGG | 0.485066 | tig0018459:+58398 | Msa1366470:CDS |
| ATAACATTTCGCAACACGGC+TGG | 0.488240 | tig0018459:+57912 | Msa1366470:CDS |
| ATTGTGATTGTTAACCAAGA+TGG | 0.492084 | tig0018459:+56387 | Msa1366470:CDS |
| TTATCAGCTAGGGATGATAA+TGG | 0.495429 | tig0018459:-55712 | None:intergenic |
| CTTGCAGCTGTGGTTGCACA+AGG | 0.496740 | tig0018459:+57873 | Msa1366470:intron |
| ACTCTACTTGCTAACCAAAA+CGG | 0.505690 | tig0018459:+55793 | Msa1366470:CDS |
| ATCTTTAAGAGCGGAAATTG+TGG | 0.509483 | tig0018459:-55926 | None:intergenic |
| AAGAAGTACTTGATGATGGT+TGG | 0.510321 | tig0018459:+56540 | Msa1366470:CDS |
| CAAGCAGTCGCGGTAAGAAA+CGG | 0.512615 | tig0018459:+57948 | Msa1366470:CDS |
| TACCGCATCTTCGGATCAAA+CGG | 0.513345 | tig0018459:+56107 | Msa1366470:CDS |
| GTCCTTGAGTACTCCTTCCA+TGG | 0.514153 | tig0018459:-58287 | None:intergenic |
| GAAACGACCATAGTCAATTA+CGG | 0.518037 | tig0018459:-55818 | None:intergenic |
| ACTTGATGATGGTTGGAGAT+GGG | 0.527173 | tig0018459:+56547 | Msa1366470:CDS |
| TACTTGATGATGGTTGGAGA+TGG | 0.529077 | tig0018459:+56546 | Msa1366470:CDS |
| AATGTTCTTCCCATTTCTCA+AGG | 0.529646 | tig0018459:+56018 | Msa1366470:CDS |
| TTCTACAGCTGCAGCTTCGA+AGG | 0.532295 | tig0018459:+57987 | Msa1366470:CDS |
| AGTATGAGAGTGAATTGGAT+TGG | 0.532578 | tig0018459:+58437 | Msa1366470:CDS |
| ACTATGAATCTTTGTATCAT+CGG | 0.534932 | tig0018459:-56157 | None:intergenic |
| AAACAAGAAGTACTTGATGA+TGG | 0.536365 | tig0018459:+56536 | Msa1366470:CDS |
| ATTGTCCACTGCTGGGAAGT+CGG | 0.542110 | tig0018459:-58133 | None:intergenic |
| TAACATAACATTTCGCAACA+CGG | 0.542157 | tig0018459:+57908 | Msa1366470:CDS |
| ATTAATCGAACGATTATCAC+TGG | 0.547300 | tig0018459:+56570 | Msa1366470:CDS |
| AAGTATGAAACACCAGTTTG+AGG | 0.552647 | tig0018459:-58533 | None:intergenic |
| GAGTATAATAATACAGGACT+TGG | 0.553401 | tig0018459:+58404 | Msa1366470:CDS |
| CAGTGAAAACATACCTTGGT+AGG | 0.555300 | tig0018459:+58264 | Msa1366470:CDS |
| GACTCGCAGATTGTTTGTGG+TGG | 0.559033 | tig0018459:-55745 | None:intergenic |
| AAACATACCTTGGTAGGCCA+TGG | 0.560177 | tig0018459:+58270 | Msa1366470:CDS |
| TGTTAAAACAGCACTAAGCA+AGG | 0.561946 | tig0018459:-56055 | None:intergenic |
| GTTTGATAAATCCTTCTGGT+TGG | 0.562814 | tig0018459:+58336 | Msa1366470:CDS |
| GGTTGCACAAGGGTTCTTAG+CGG | 0.564354 | tig0018459:+57884 | Msa1366470:CDS |
| ATTGTTAACCAAGATGGAAG+TGG | 0.567528 | tig0018459:+56393 | Msa1366470:CDS |
| TTCGCGATAAAATTGTCTCA+TGG | 0.571446 | tig0018459:-58036 | None:intergenic |
| TCTGGTTGGCGTGAATGGAG+TGG | 0.573202 | tig0018459:+58350 | Msa1366470:CDS |
| ACTGGTGTTTCATACTTGAG+TGG | 0.576700 | tig0018459:+58539 | Msa1366470:CDS |
| GGACCTTAGAATTATCAGCT+AGG | 0.579500 | tig0018459:-55723 | None:intergenic |
| GGCCATGGAAGGAGTACTCA+AGG | 0.580211 | tig0018459:+58285 | Msa1366470:CDS |
| TAATGGTAATGATGTCAAGA+TGG | 0.590758 | tig0018459:-55695 | None:intergenic |
| GCGTTGAATTGTCCACTGCT+GGG | 0.593272 | tig0018459:-58140 | None:intergenic |
| GACCTTAGAATTATCAGCTA+GGG | 0.594297 | tig0018459:-55722 | None:intergenic |
| TGTCCACTGCTGGGAAGTCG+GGG | 0.596925 | tig0018459:-58131 | None:intergenic |
| TGGATCTGTTCGGCCTTGAG+CGG | 0.598244 | tig0018459:-58168 | None:intergenic |
| AATAACACGGTTGCTAGTAG+TGG | 0.598741 | tig0018459:+56456 | Msa1366470:CDS |
| TATCCCCGACTTCCCAGCAG+TGG | 0.603880 | tig0018459:+58128 | Msa1366470:CDS |
| CTCCATTCACGCCAACCAGA+AGG | 0.609653 | tig0018459:-58347 | None:intergenic |
| TTCAACGCTATAACCGCTCA+AGG | 0.613112 | tig0018459:+58155 | Msa1366470:CDS |
| ATACCTTGGTAGGCCATGGA+AGG | 0.613409 | tig0018459:+58274 | Msa1366470:CDS |
| ACTCGCAGATTGTTTGTGGT+GGG | 0.616803 | tig0018459:-55744 | None:intergenic |
| CACCGTTTGATCCGAAGATG+CGG | 0.621833 | tig0018459:-56109 | None:intergenic |
| GGTACAGTGAAAACATACCT+TGG | 0.633037 | tig0018459:+58260 | Msa1366470:CDS |
| GAAGCTGCAGCTGTAGAAGG+TGG | 0.633472 | tig0018459:-57982 | None:intergenic |
| GATTCAGCTAGAAATCGTCA+TGG | 0.643888 | tig0018459:+56318 | Msa1366470:CDS |
| ACTCCTTCCATGGCCTACCA+AGG | 0.644437 | tig0018459:-58277 | None:intergenic |
| ATTCAGCTAGAAATCGTCAT+GGG | 0.648742 | tig0018459:+56319 | Msa1366470:CDS |
| AAGCAAACACCAAGCAGTCG+CGG | 0.652116 | tig0018459:+57938 | Msa1366470:CDS |
| TGGTTGGCGTGAATGGAGTG+GGG | 0.656793 | tig0018459:+58352 | Msa1366470:CDS |
| GAATTGGCAATCTTTAAGAG+CGG | 0.665131 | tig0018459:-55935 | None:intergenic |
| TTGCAGCTGTGGTTGCACAA+GGG | 0.674966 | tig0018459:+57874 | Msa1366470:intron |
| ACAGATCCAAATCAAAACAC+AGG | 0.676474 | tig0018459:+58182 | Msa1366470:CDS |
| AAACGTTGCACCAAATAACA+CGG | 0.679707 | tig0018459:+56443 | Msa1366470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTTTTTTATAATA+AGG | - | tig0018459:57022-57041 | None:intergenic | 0.0% |
| !!! | ATTTTTTTTTCCTTATAATA+CGG | - | tig0018459:56983-57002 | None:intergenic | 10.0% |
| !! | TATTATAAGGAAAAAAAAAT+AGG | + | tig0018459:56983-57002 | Msa1366470:intron | 10.0% |
| !!! | TCAAATAAACATTTTTTTTA+TGG | + | tig0018459:57402-57421 | Msa1366470:intron | 10.0% |
| !!! | TTTAGTAAGTTTTTTTTATA+AGG | + | tig0018459:57580-57599 | Msa1366470:intron | 10.0% |
| !!! | TTAGTAAGTTTTTTTTATAA+GGG | + | tig0018459:57581-57600 | Msa1366470:intron | 10.0% |
| !! | TTAATTTATCACATGTATTT+AGG | + | tig0018459:56894-56913 | Msa1366470:intron | 15.0% |
| !!! | TTTTTTTTATAAGGGATATT+TGG | + | tig0018459:57589-57608 | Msa1366470:intron | 15.0% |
| !! | ACAAAAAAACACAAATATCA+TGG | + | tig0018459:56217-56236 | Msa1366470:CDS | 20.0% |
| !! | TAATTCATGTTTAAGTAAAG+TGG | - | tig0018459:56848-56867 | None:intergenic | 20.0% |
| !!! | TCATGCATTTTATTTTTTGA+GGG | - | tig0018459:56959-56978 | None:intergenic | 20.0% |
| !!! | TTCATGCATTTTATTTTTTG+AGG | - | tig0018459:56960-56979 | None:intergenic | 20.0% |
| !! | TATTAAAAATATACTCACTC+TGG | - | tig0018459:57477-57496 | None:intergenic | 20.0% |
| !!! | ATGCATACAACTTTTTTTAT+TGG | + | tig0018459:57618-57637 | Msa1366470:intron | 20.0% |
| !! | TAAAGAAAATGACTTATGAA+TGG | - | tig0018459:57687-57706 | None:intergenic | 20.0% |
| !!! | GATTAAGTGTGATTTTATAA+AGG | - | tig0018459:57712-57731 | None:intergenic | 20.0% |
| !!! | AGTTTATATGGAATGTTTTA+TGG | + | tig0018459:58310-58329 | Msa1366470:CDS | 20.0% |
| ! | TACTAAGTTTAAGAATTTGC+GGG | - | tig0018459:55869-55888 | None:intergenic | 25.0% |
| ! | GTACTAAGTTTAAGAATTTG+CGG | - | tig0018459:55870-55889 | None:intergenic | 25.0% |
| !!! | GATTTATTTTGAAGATGAGA+AGG | - | tig0018459:55892-55911 | None:intergenic | 25.0% |
| ! | ACTATGAATCTTTGTATCAT+CGG | - | tig0018459:56160-56179 | None:intergenic | 25.0% |
| !! | AGACATTTGAATTTTCACAA+CGG | + | tig0018459:56252-56271 | Msa1366470:CDS | 25.0% |
| !! | ACTTTATCTGACATTTTCAA+CGG | - | tig0018459:56285-56304 | None:intergenic | 25.0% |
| !!! | AACAATTGATGAAAGTGTTA+CGG | + | tig0018459:56356-56375 | Msa1366470:CDS | 25.0% |
| !! | TTTCTGATTTTTGTTACTGA+GGG | + | tig0018459:56483-56502 | Msa1366470:CDS | 25.0% |
| !!! | ATCAAGTACTTCTTGTTTTT+GGG | - | tig0018459:56534-56553 | None:intergenic | 25.0% |
| !! | ATAATGCTAAAAACTTTTCC+TGG | + | tig0018459:57104-57123 | Msa1366470:intron | 25.0% |
| !! | TTTTCAGTATTTCTTTTTCC+AGG | - | tig0018459:57125-57144 | None:intergenic | 25.0% |
| ! | AAGTATATATGATCATCTCT+TGG | + | tig0018459:57551-57570 | Msa1366470:intron | 25.0% |
| ! | GATTAAGTGTGATTGAATTT+AGG | - | tig0018459:57665-57684 | None:intergenic | 25.0% |
| ! | ATATCATAAAGTGAGCATAA+AGG | - | tig0018459:57852-57871 | None:intergenic | 25.0% |
| ! | TATAAAAGCTAGTGATGATT+TGG | + | tig0018459:58226-58245 | Msa1366470:CDS | 25.0% |
| ! | TATGCAGAGTATAATAATAC+AGG | + | tig0018459:58398-58417 | Msa1366470:CDS | 25.0% |
| !! | TTTTACAGTGGATAACTTTT+TGG | + | tig0018459:58493-58512 | Msa1366470:CDS | 25.0% |
| ! | TAATGGTAATGATGTCAAGA+TGG | - | tig0018459:55698-55717 | None:intergenic | 30.0% |
| ! | AATTTTGTTGAGCTAGGAAT+TGG | - | tig0018459:55954-55973 | None:intergenic | 30.0% |
| ! | ATTCGAAATTTTGTTGAGCT+AGG | - | tig0018459:55960-55979 | None:intergenic | 30.0% |
| AATTCTTCACCTTGAGAAAT+GGG | - | tig0018459:56030-56049 | None:intergenic | 30.0% | |
| AAATTCTTCACCTTGAGAAA+TGG | - | tig0018459:56031-56050 | None:intergenic | 30.0% | |
| ! | AACCAACAAACTTGTTTAGA+TGG | + | tig0018459:56078-56097 | Msa1366470:CDS | 30.0% |
| AACCATCTAAACAAGTTTGT+TGG | - | tig0018459:56083-56102 | None:intergenic | 30.0% | |
| !!! | TCCCTTGCTCTATTTTTAAA+GGG | + | tig0018459:56183-56202 | Msa1366470:CDS | 30.0% |
| ! | ACCCTTTAAAAATAGAGCAA+GGG | - | tig0018459:56187-56206 | None:intergenic | 30.0% |
| ! | AACCCTTTAAAAATAGAGCA+AGG | - | tig0018459:56188-56207 | None:intergenic | 30.0% |
| !!! | TTGCTCTATTTTTAAAGGGT+TGG | + | tig0018459:56187-56206 | Msa1366470:CDS | 30.0% |
| !!! | TGCTCTATTTTTAAAGGGTT+GGG | + | tig0018459:56188-56207 | Msa1366470:CDS | 30.0% |
| CAAATATCATGGTCACAAAA+TGG | + | tig0018459:56228-56247 | Msa1366470:CDS | 30.0% | |
| ATTGTGATTGTTAACCAAGA+TGG | + | tig0018459:56387-56406 | Msa1366470:CDS | 30.0% | |
| TAAAATTTCCACTTCCATCT+TGG | - | tig0018459:56404-56423 | None:intergenic | 30.0% | |
| ! | CTTTCTGATTTTTGTTACTG+AGG | + | tig0018459:56482-56501 | Msa1366470:CDS | 30.0% |
| !!! | CATCAAGTACTTCTTGTTTT+TGG | - | tig0018459:56535-56554 | None:intergenic | 30.0% |
| !! | AAACAAGAAGTACTTGATGA+TGG | + | tig0018459:56536-56555 | Msa1366470:CDS | 30.0% |
| ATTAATCGAACGATTATCAC+TGG | + | tig0018459:56570-56589 | Msa1366470:CDS | 30.0% | |
| GGTGATCATAATGTTATTGA+TGG | + | tig0018459:56591-56610 | Msa1366470:CDS | 30.0% | |
| TTTCATGCATGCTATAAGTA+AGG | - | tig0018459:56873-56892 | None:intergenic | 30.0% | |
| ! | CACATGTATTTAGGATTATG+TGG | + | tig0018459:56903-56922 | Msa1366470:intron | 30.0% |
| !!! | GCATTTTATTTTTTGAGGGA+GGG | - | tig0018459:56955-56974 | None:intergenic | 30.0% |
| !!! | TGCATTTTATTTTTTGAGGG+AGG | - | tig0018459:56956-56975 | None:intergenic | 30.0% |
| AATGCATGAACCGTATTATA+AGG | + | tig0018459:56970-56989 | Msa1366470:intron | 30.0% | |
| TTGTAAGGTAGTAATCTAGA+TGG | - | tig0018459:57734-57753 | None:intergenic | 30.0% | |
| ! | TCTAGATGGATGATTTTGTA+AGG | - | tig0018459:57749-57768 | None:intergenic | 30.0% |
| ATACCAAGAAATACACTTTG+AGG | - | tig0018459:57778-57797 | None:intergenic | 30.0% | |
| TAACATAACATTTCGCAACA+CGG | + | tig0018459:57908-57927 | Msa1366470:CDS | 30.0% | |
| !!! | TGTTTTGATTTGGATCTGTT+CGG | - | tig0018459:58181-58200 | None:intergenic | 30.0% |
| GAGTATAATAATACAGGACT+TGG | + | tig0018459:58404-58423 | Msa1366470:CDS | 30.0% | |
| ATACTAGTATGAGAGTGAAT+TGG | + | tig0018459:58432-58451 | Msa1366470:CDS | 30.0% | |
| AGAAAAGCAGAGTGTAAGAA+TGG | - | tig0018459:55665-55684 | None:intergenic | 35.0% | |
| TTATCAGCTAGGGATGATAA+TGG | - | tig0018459:55715-55734 | None:intergenic | 35.0% | |
| ATCCCTAGCTGATAATTCTA+AGG | + | tig0018459:55720-55739 | Msa1366470:CDS | 35.0% | |
| GACCTTAGAATTATCAGCTA+GGG | - | tig0018459:55725-55744 | None:intergenic | 35.0% | |
| TTTGCAAAAAGGAGGGTTTA+CGG | - | tig0018459:55773-55792 | None:intergenic | 35.0% | |
| ! | GTAGAGTTTTGCAAAAAGGA+GGG | - | tig0018459:55780-55799 | None:intergenic | 35.0% |
| ! | AGTAGAGTTTTGCAAAAAGG+AGG | - | tig0018459:55781-55800 | None:intergenic | 35.0% |
| ! | GCAAGTAGAGTTTTGCAAAA+AGG | - | tig0018459:55784-55803 | None:intergenic | 35.0% |
| ! | ACTCTACTTGCTAACCAAAA+CGG | + | tig0018459:55793-55812 | Msa1366470:CDS | 35.0% |
| GAAACGACCATAGTCAATTA+CGG | - | tig0018459:55821-55840 | None:intergenic | 35.0% | |
| GTTTAAGAATTTGCGGGATT+GGG | - | tig0018459:55863-55882 | None:intergenic | 35.0% | |
| AGTTTAAGAATTTGCGGGAT+TGG | - | tig0018459:55864-55883 | None:intergenic | 35.0% | |
| ! | TCTTTAAGAGCGGAAATTGT+GGG | - | tig0018459:55928-55947 | None:intergenic | 35.0% |
| ! | ATCTTTAAGAGCGGAAATTG+TGG | - | tig0018459:55929-55948 | None:intergenic | 35.0% |
| ! | GAATTGGCAATCTTTAAGAG+CGG | - | tig0018459:55938-55957 | None:intergenic | 35.0% |
| AATGTTCTTCCCATTTCTCA+AGG | + | tig0018459:56018-56037 | Msa1366470:CDS | 35.0% | |
| TGTTAAAACAGCACTAAGCA+AGG | - | tig0018459:56058-56077 | None:intergenic | 35.0% | |
| TGGTTTAATTACCGCATCTT+CGG | + | tig0018459:56098-56117 | Msa1366470:CDS | 35.0% | |
| !!! | GTCCCTTGCTCTATTTTTAA+AGG | + | tig0018459:56182-56201 | Msa1366470:CDS | 35.0% |
| !!! | CTATTTTTAAAGGGTTGGGT+TGG | + | tig0018459:56192-56211 | Msa1366470:CDS | 35.0% |
| ATTCAGCTAGAAATCGTCAT+GGG | + | tig0018459:56319-56338 | Msa1366470:CDS | 35.0% | |
| ATTGTTAACCAAGATGGAAG+TGG | + | tig0018459:56393-56412 | Msa1366470:CDS | 35.0% | |
| AAACGTTGCACCAAATAACA+CGG | + | tig0018459:56443-56462 | Msa1366470:CDS | 35.0% | |
| !! | AAGAAGTACTTGATGATGGT+TGG | + | tig0018459:56540-56559 | Msa1366470:CDS | 35.0% |
| ACGTTCAATTCAGCAACATT+TGG | + | tig0018459:56621-56640 | Msa1366470:CDS | 35.0% | |
| AGTTGTCATGATGTTGTAGT+CGG | - | tig0018459:57188-57207 | None:intergenic | 35.0% | |
| GTTTAACAGAAAACACGAGA+GGG | - | tig0018459:57242-57261 | None:intergenic | 35.0% | |
| TGTTTAACAGAAAACACGAG+AGG | - | tig0018459:57243-57262 | None:intergenic | 35.0% | |
| AAATATACTCACTCTGGTCA+TGG | - | tig0018459:57471-57490 | None:intergenic | 35.0% | |
| !! | CTTTGAGGTAGTAATCTAGA+TGG | - | tig0018459:57763-57782 | None:intergenic | 35.0% |
| CTACCTCAAAGTGTATTTCT+TGG | + | tig0018459:57772-57791 | Msa1366470:intron | 35.0% | |
| TTATGATATACTTGCAGCTG+TGG | + | tig0018459:57863-57882 | Msa1366470:intron | 35.0% | |
| TTCGCGATAAAATTGTCTCA+TGG | - | tig0018459:58039-58058 | None:intergenic | 35.0% | |
| ! | GGAACAGTTGACTTCATATT+TGG | + | tig0018459:58071-58090 | Msa1366470:CDS | 35.0% |
| ACAGATCCAAATCAAAACAC+AGG | + | tig0018459:58182-58201 | Msa1366470:CDS | 35.0% | |
| !!! | GAAGTTCCTGTGTTTTGATT+TGG | - | tig0018459:58191-58210 | None:intergenic | 35.0% |
| ! | GTTTTCACTGTACCAATCAA+CGG | - | tig0018459:58254-58273 | None:intergenic | 35.0% |
| GTACTCAAGGACAGTTTATA+TGG | + | tig0018459:58298-58317 | Msa1366470:CDS | 35.0% | |
| GACAGTTTGATAAATCCTTC+TGG | + | tig0018459:58332-58351 | Msa1366470:CDS | 35.0% | |
| GTTTGATAAATCCTTCTGGT+TGG | + | tig0018459:58336-58355 | Msa1366470:CDS | 35.0% | |
| AGTATGAGAGTGAATTGGAT+TGG | + | tig0018459:58437-58456 | Msa1366470:CDS | 35.0% | |
| ! | TGATGCTGCTAATTTTACAG+TGG | + | tig0018459:58481-58500 | Msa1366470:CDS | 35.0% |
| ! | ACAGTGGATAACTTTTTGGA+TGG | + | tig0018459:58497-58516 | Msa1366470:CDS | 35.0% |
| ! | CAGTGGATAACTTTTTGGAT+GGG | + | tig0018459:58498-58517 | Msa1366470:CDS | 35.0% |
| ! | AGTGGATAACTTTTTGGATG+GGG | + | tig0018459:58499-58518 | Msa1366470:CDS | 35.0% |
| AAGTATGAAACACCAGTTTG+AGG | - | tig0018459:58536-58555 | None:intergenic | 35.0% | |
| GGACCTTAGAATTATCAGCT+AGG | - | tig0018459:55726-55745 | None:intergenic | 40.0% | |
| ! | GGGATTGGGATAAGGATTTT+CGG | - | tig0018459:55849-55868 | None:intergenic | 40.0% |
| GATTCAGCTAGAAATCGTCA+TGG | + | tig0018459:56318-56337 | Msa1366470:CDS | 40.0% | |
| ! | CTACTAGCAACCGTGTTATT+TGG | - | tig0018459:56456-56475 | None:intergenic | 40.0% |
| AATAACACGGTTGCTAGTAG+TGG | + | tig0018459:56456-56475 | Msa1366470:CDS | 40.0% | |
| !! | TACTTGATGATGGTTGGAGA+TGG | + | tig0018459:56546-56565 | Msa1366470:CDS | 40.0% |
| !! | ACTTGATGATGGTTGGAGAT+GGG | + | tig0018459:56547-56566 | Msa1366470:CDS | 40.0% |
| !!! | GATGCTAGCTAGCTTTTGAT+TGG | - | tig0018459:56767-56786 | None:intergenic | 40.0% |
| ! | TTGACTACTCTTTTGAACGC+TGG | + | tig0018459:57276-57295 | Msa1366470:intron | 40.0% |
| GGTACAGTGAAAACATACCT+TGG | + | tig0018459:58260-58279 | Msa1366470:CDS | 40.0% | |
| CAGTGAAAACATACCTTGGT+AGG | + | tig0018459:58264-58283 | Msa1366470:CDS | 40.0% | |
| ! | ACTTTTTGGATGGGGATAGT+TGG | + | tig0018459:58507-58526 | Msa1366470:CDS | 40.0% |
| ACTGGTGTTTCATACTTGAG+TGG | + | tig0018459:58539-58558 | Msa1366470:CDS | 40.0% | |
| ACTCGCAGATTGTTTGTGGT+GGG | - | tig0018459:55747-55766 | None:intergenic | 45.0% | |
| !!! | AGTCAATTACGGTGCCGTTT+TGG | - | tig0018459:55810-55829 | None:intergenic | 45.0% |
| AACGGCACCGTAATTGACTA+TGG | + | tig0018459:55811-55830 | Msa1366470:CDS | 45.0% | |
| GAATTTGCGGGATTGGGATA+AGG | - | tig0018459:55857-55876 | None:intergenic | 45.0% | |
| TACCGCATCTTCGGATCAAA+CGG | + | tig0018459:56107-56126 | Msa1366470:CDS | 45.0% | |
| ATAACATTTCGCAACACGGC+TGG | + | tig0018459:57912-57931 | Msa1366470:CDS | 45.0% | |
| TATCGCGAATGCGACATCTA+TGG | + | tig0018459:58050-58069 | Msa1366470:CDS | 45.0% | |
| TTCAACGCTATAACCGCTCA+AGG | + | tig0018459:58155-58174 | Msa1366470:CDS | 45.0% | |
| ! | GATGATTTGGCTCCGTTGAT+TGG | + | tig0018459:58239-58258 | Msa1366470:CDS | 45.0% |
| AAACATACCTTGGTAGGCCA+TGG | + | tig0018459:58270-58289 | Msa1366470:CDS | 45.0% | |
| GATAGTTGGTTGCCTCAAAC+TGG | + | tig0018459:58521-58540 | Msa1366470:CDS | 45.0% | |
| !! | TTATATAGTTAATATAAAAT+AGG | + | tig0018459:57146-57165 | Msa1366470:intron | 5.0% |
| !! | TATATAGTTAATATAAAATA+GGG | + | tig0018459:57147-57166 | Msa1366470:intron | 5.0% |
| GACTCGCAGATTGTTTGTGG+TGG | - | tig0018459:55748-55767 | None:intergenic | 50.0% | |
| GTGGACTCGCAGATTGTTTG+TGG | - | tig0018459:55751-55770 | None:intergenic | 50.0% | |
| GCAAAAAGGAGGGTTTACGG+TGG | - | tig0018459:55770-55789 | None:intergenic | 50.0% | |
| CACCGTTTGATCCGAAGATG+CGG | - | tig0018459:56112-56131 | None:intergenic | 50.0% | |
| TCTAAGCGTACTCATGCGCA+TGG | - | tig0018459:56738-56757 | None:intergenic | 50.0% | |
| TTGCAGCTGTGGTTGCACAA+GGG | + | tig0018459:57874-57893 | Msa1366470:intron | 50.0% | |
| GGTTGCACAAGGGTTCTTAG+CGG | + | tig0018459:57884-57903 | Msa1366470:CDS | 50.0% | |
| AAGCAAACACCAAGCAGTCG+CGG | + | tig0018459:57938-57957 | Msa1366470:CDS | 50.0% | |
| CAAGCAGTCGCGGTAAGAAA+CGG | + | tig0018459:57948-57967 | Msa1366470:CDS | 50.0% | |
| TTCGAAGCTGCAGCTGTAGA+AGG | - | tig0018459:57988-58007 | None:intergenic | 50.0% | |
| TTCTACAGCTGCAGCTTCGA+AGG | + | tig0018459:57987-58006 | Msa1366470:CDS | 50.0% | |
| ATTGTCCACTGCTGGGAAGT+CGG | - | tig0018459:58136-58155 | None:intergenic | 50.0% | |
| GCGTTGAATTGTCCACTGCT+GGG | - | tig0018459:58143-58162 | None:intergenic | 50.0% | |
| ! | AGCGTTGAATTGTCCACTGC+TGG | - | tig0018459:58144-58163 | None:intergenic | 50.0% |
| ATACCTTGGTAGGCCATGGA+AGG | + | tig0018459:58274-58293 | Msa1366470:CDS | 50.0% | |
| GTCCTTGAGTACTCCTTCCA+TGG | - | tig0018459:58290-58309 | None:intergenic | 50.0% | |
| ! | ATCCTTCTGGTTGGCGTGAA+TGG | + | tig0018459:58345-58364 | Msa1366470:CDS | 50.0% |
| CTTGCAGCTGTGGTTGCACA+AGG | + | tig0018459:57873-57892 | Msa1366470:intron | 55.0% | |
| !! | GCGACTGCTTGGTGTTTGCT+TGG | - | tig0018459:57939-57958 | None:intergenic | 55.0% |
| CGTTTCTTACCGCGACTGCT+TGG | - | tig0018459:57950-57969 | None:intergenic | 55.0% | |
| GAAGCTGCAGCTGTAGAAGG+TGG | - | tig0018459:57985-58004 | None:intergenic | 55.0% | |
| TTGTCCACTGCTGGGAAGTC+GGG | - | tig0018459:58135-58154 | None:intergenic | 55.0% | |
| TGGATCTGTTCGGCCTTGAG+CGG | - | tig0018459:58171-58190 | None:intergenic | 55.0% | |
| ACTCCTTCCATGGCCTACCA+AGG | - | tig0018459:58280-58299 | None:intergenic | 55.0% | |
| !! | GGCCATGGAAGGAGTACTCA+AGG | + | tig0018459:58285-58304 | Msa1366470:CDS | 55.0% |
| CTCCATTCACGCCAACCAGA+AGG | - | tig0018459:58350-58369 | None:intergenic | 55.0% | |
| TCTGGTTGGCGTGAATGGAG+TGG | + | tig0018459:58350-58369 | Msa1366470:CDS | 55.0% | |
| CTGGTTGGCGTGAATGGAGT+GGG | + | tig0018459:58351-58370 | Msa1366470:CDS | 55.0% | |
| TGGTTGGCGTGAATGGAGTG+GGG | + | tig0018459:58352-58371 | Msa1366470:CDS | 55.0% | |
| TATCCCCGACTTCCCAGCAG+TGG | + | tig0018459:58128-58147 | Msa1366470:CDS | 60.0% | |
| TGTCCACTGCTGGGAAGTCG+GGG | - | tig0018459:58134-58153 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018459 | gene | 55643 | 58574 | 55643 | ID=Msa1366470;Name=Msa1366470 |
| tig0018459 | mRNA | 55643 | 58574 | 55643 | ID=Msa1366470-mRNA-1;Parent=Msa1366470;Name=Msa1366470-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|1|1|1|2|0|564 |
| tig0018459 | exon | 55643 | 56642 | 55643 | ID=Msa1366470-mRNA-1:exon:15168;Parent=Msa1366470-mRNA-1 |
| tig0018459 | exon | 57880 | 58574 | 57880 | ID=Msa1366470-mRNA-1:exon:15169;Parent=Msa1366470-mRNA-1 |
| tig0018459 | CDS | 55643 | 56642 | 55643 | ID=Msa1366470-mRNA-1:cds;Parent=Msa1366470-mRNA-1 |
| tig0018459 | CDS | 57880 | 58574 | 57880 | ID=Msa1366470-mRNA-1:cds;Parent=Msa1366470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
