AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0788660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0788660 MtrunA17_Chr6g0484731 93.379 438 24 2 1 435 1 436 0.0 810
Msa0788660 MtrunA17_Chr6g0484731 82.353 85 12 2 417 500 487 569 1.71e-34 136
Msa0788660 MtrunA17_Chr4g0010951 43.893 262 131 6 175 427 46 300 1.69e-61 208
Msa0788660 MtrunA17_Chr8g0384731 44.275 262 130 8 175 432 58 307 6.98e-61 206
Msa0788660 MtrunA17_Chr1g0159791 46.154 260 129 4 175 431 42 293 7.91e-61 205
Msa0788660 MtrunA17_Chr3g0130741 44.015 259 134 8 175 432 69 317 1.05e-58 200
Msa0788660 MtrunA17_Chr1g0179751 26.590 519 256 18 43 484 1 471 4.90e-37 143
Msa0788660 MtrunA17_Chr3g0078321 32.028 281 155 10 175 437 45 307 1.92e-32 128
Msa0788660 MtrunA17_Chr7g0265331 26.873 387 206 12 186 500 77 458 3.43e-32 129
Msa0788660 MtrunA17_Chr4g0027681 26.385 379 202 12 179 484 64 438 5.59e-32 128
Msa0788660 MtrunA17_Chr2g0320621 26.521 411 220 11 147 484 38 439 4.04e-31 125
Msa0788660 MtrunA17_Chr7g0249451 32.721 272 157 12 180 431 59 324 7.42e-28 116
Msa0788660 MtrunA17_Chr7g0221681 31.690 284 148 11 179 431 59 327 2.42e-26 111
Msa0788660 MtrunA17_Chr8g0371371 32.016 253 141 9 190 427 112 348 7.32e-26 110
Msa0788660 MtrunA17_Chr2g0307991 27.362 307 186 9 152 440 29 316 6.77e-24 103
Msa0788660 MtrunA17_Chr5g0435871 31.298 262 155 12 184 430 82 333 1.91e-23 102
Msa0788660 MtrunA17_Chr5g0435971 31.298 262 155 12 184 430 79 330 1.96e-23 102
Msa0788660 MtrunA17_Chr5g0401601 31.970 269 125 11 188 428 86 324 2.73e-23 103
Msa0788660 MtrunA17_Chr4g0053721 31.008 258 142 10 188 428 78 316 6.13e-23 102
Msa0788660 MtrunA17_Chr2g0308001 28.425 292 188 8 162 440 33 316 7.37e-23 101
Msa0788660 MtrunA17_Chr3g0124421 31.008 258 144 10 190 427 99 342 1.40e-22 100
Msa0788660 MtrunA17_Chr5g0419291 30.627 271 166 10 189 447 85 345 3.54e-22 99.0
Msa0788660 MtrunA17_Chr5g0406001 30.108 279 162 11 190 450 112 375 5.89e-22 99.0
Msa0788660 MtrunA17_Chr5g0425141 29.851 268 154 10 190 438 101 353 6.52e-22 99.0
Msa0788660 MtrunA17_Chr1g0189381 30.797 276 167 10 175 431 52 322 8.69e-22 98.2
Msa0788660 MtrunA17_Chr8g0386441 29.893 281 161 12 184 444 79 343 1.18e-21 97.4
Msa0788660 MtrunA17_Chr8g0371351 28.676 272 152 10 190 438 100 352 4.24e-21 96.3
Msa0788660 MtrunA17_Chr3g0087851 28.405 257 166 9 186 430 85 335 1.29e-20 94.4
Msa0788660 MtrunA17_Chr4g0023351 29.114 237 152 7 180 408 51 279 1.22e-19 89.4
Msa0788660 MtrunA17_Chr2g0291201 26.490 302 193 9 188 475 100 386 1.23e-19 91.3
Msa0788660 MtrunA17_Chr7g0275731 28.195 266 159 11 181 430 132 381 2.11e-19 90.9
Msa0788660 MtrunA17_Chr5g0415951 26.587 252 165 8 191 430 89 332 2.45e-18 87.4
Msa0788660 MtrunA17_Chr2g0310801 30.451 266 157 12 189 438 89 342 1.15e-17 85.5
Msa0788660 MtrunA17_Chr1g0212321 27.237 257 163 10 181 427 137 379 1.45e-17 85.5
Msa0788660 MtrunA17_Chr5g0395931 29.630 270 156 13 189 440 87 340 5.01e-17 83.2
Msa0788660 MtrunA17_Chr3g0130931 28.159 277 159 13 173 430 90 345 1.02e-16 82.4
Msa0788660 MtrunA17_Chr5g0395871 27.213 305 177 14 148 435 52 328 1.31e-16 82.0
Msa0788660 MtrunA17_Chr3g0099901 29.658 263 165 8 182 435 134 385 2.98e-16 81.3
Msa0788660 MtrunA17_Chr6g0484901 25.703 249 152 9 191 427 157 384 1.02e-15 79.7
Msa0788660 MtrunA17_Chr6g0457401 25.498 251 175 7 191 433 92 338 1.76e-15 78.6
Msa0788660 MtrunA17_Chr4g0001991 24.810 395 246 16 75 432 33 413 2.17e-15 78.6
Msa0788660 MtrunA17_Chr1g0210201 26.923 260 156 10 181 427 122 360 3.42e-15 77.8
Msa0788660 MtrunA17_Chr5g0395911 29.368 269 157 13 189 440 66 318 3.52e-15 77.4
Msa0788660 MtrunA17_Chr3g0099891 24.735 283 185 10 155 430 88 349 1.01e-14 76.3
Msa0788660 MtrunA17_Chr1g0165201 24.138 261 167 10 181 427 119 362 7.55e-14 73.6
Msa0788660 MtrunA17_Chr6g0487471 27.241 290 184 10 175 447 71 350 1.06e-13 73.2
Msa0788660 MtrunA17_Chr3g0112051 24.100 361 192 18 195 492 78 419 1.83e-13 72.4
Msa0788660 MtrunA17_Chr6g0486981 24.907 269 161 10 180 423 78 330 3.26e-13 71.6
Msa0788660 MtrunA17_Chr4g0010941 45.055 91 36 4 342 427 2 83 3.73e-13 69.3
Msa0788660 MtrunA17_Chr5g0442921 35.664 143 80 6 182 314 183 323 3.75e-12 68.6
Msa0788660 MtrunA17_Chr3g0095891 28.261 276 154 11 182 427 89 350 4.42e-12 68.2
Msa0788660 MtrunA17_Chr4g0061641 29.583 240 137 10 209 430 73 298 1.32e-11 66.2
Msa0788660 MtrunA17_Chr7g0239001 20.760 342 218 10 187 489 49 376 2.64e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0788660 AT1G49050.3 45.752 459 207 8 2 433 7 450 7.94e-128 380
Msa0788660 AT1G49050.1 45.752 459 207 8 2 433 7 450 9.54e-126 379
Msa0788660 AT1G49050.1 67.797 59 19 0 430 488 516 574 2.44e-19 91.7
Msa0788660 AT1G49050.2 59.839 249 95 3 190 433 29 277 1.43e-100 308
Msa0788660 AT1G49050.2 52.439 82 35 1 411 488 320 401 1.29e-19 91.3
Msa0788660 AT1G44130.1 42.647 272 142 4 160 431 25 282 3.70e-67 222
Msa0788660 AT1G77480.2 46.388 263 129 6 174 431 50 305 1.52e-65 218
Msa0788660 AT1G77480.1 46.388 263 129 6 174 431 50 305 5.12e-65 218
Msa0788660 AT4G33490.1 40.345 290 159 8 141 427 8 286 5.64e-61 205
Msa0788660 AT4G33490.2 40.345 290 159 8 141 427 11 289 1.16e-60 205
Msa0788660 AT2G36670.2 26.429 420 225 13 144 484 45 459 1.16e-34 136
Msa0788660 AT2G36670.1 25.882 425 226 13 144 484 45 464 4.99e-33 132
Msa0788660 AT3G02740.1 33.333 267 152 10 179 427 71 329 1.34e-32 130
Msa0788660 AT2G36670.4 26.757 370 195 10 190 488 33 397 2.11e-32 129
Msa0788660 AT2G36670.3 26.757 370 195 10 190 488 33 397 2.11e-32 129
Msa0788660 AT5G22850.1 27.586 377 197 10 179 482 67 440 2.44e-32 129
Msa0788660 AT1G65240.1 34.409 279 151 9 175 433 56 322 5.64e-32 128
Msa0788660 AT1G08210.3 29.551 379 188 12 179 484 118 490 5.84e-32 129
Msa0788660 AT1G08210.4 29.551 379 188 12 179 484 104 476 8.88e-32 128
Msa0788660 AT1G08210.1 29.551 379 188 12 179 484 70 442 9.79e-32 128
Msa0788660 AT5G36260.1 32.482 274 154 10 179 431 64 327 6.49e-31 125
Msa0788660 AT3G02740.2 33.205 259 149 9 185 427 4 254 7.87e-31 124
Msa0788660 AT1G05840.1 33.333 279 148 12 179 431 66 332 2.65e-29 120
Msa0788660 AT1G08210.2 32.836 268 155 8 179 427 70 331 4.92e-29 120
Msa0788660 AT5G43100.2 34.766 256 132 11 188 430 73 306 1.60e-28 118
Msa0788660 AT5G43100.1 34.766 256 132 11 188 430 73 306 2.23e-28 119
Msa0788660 AT3G50050.1 33.469 245 136 7 188 423 90 316 3.94e-26 112
Msa0788660 AT4G35880.2 30.502 259 150 10 190 433 106 349 3.59e-24 105
Msa0788660 AT2G17760.1 29.545 308 172 12 137 427 61 340 3.75e-24 105
Msa0788660 AT4G35880.1 30.502 259 150 10 190 433 106 349 5.25e-24 105
Msa0788660 AT3G25700.1 26.415 318 196 12 155 445 51 357 1.06e-22 101
Msa0788660 AT5G10080.1 27.717 368 218 16 85 427 2 346 8.14e-21 95.9
Msa0788660 AT2G23945.1 30.196 255 150 9 190 430 95 335 5.54e-20 92.8
Msa0788660 AT2G35615.1 28.517 263 158 9 182 420 76 332 3.18e-18 87.4
Msa0788660 AT3G25700.2 23.599 339 212 12 155 485 51 350 3.22e-18 86.7
Msa0788660 AT5G10770.1 29.195 298 186 12 155 438 90 376 4.53e-18 87.4
Msa0788660 AT3G51350.1 27.344 256 165 6 190 433 101 347 6.49e-18 87.0
Msa0788660 AT3G20015.1 28.295 258 161 10 181 428 121 364 1.45e-17 85.5
Msa0788660 AT2G28010.1 25.517 290 173 12 165 442 41 299 5.58e-17 83.2
Msa0788660 AT4G30030.1 26.848 257 148 11 191 430 78 311 8.78e-17 82.8
Msa0788660 AT3G51360.7 27.652 264 143 11 190 430 4 242 1.42e-16 82.0
Msa0788660 AT3G51340.3 26.295 251 162 8 190 427 102 342 2.21e-16 81.6
Msa0788660 AT2G28225.1 27.402 281 155 13 180 442 56 305 2.47e-16 81.3
Msa0788660 AT3G51360.9 27.547 265 144 11 190 431 98 337 2.82e-16 81.6
Msa0788660 AT3G51360.1 27.547 265 144 11 190 431 88 327 3.47e-16 81.6
Msa0788660 AT3G51360.2 30.000 180 109 6 190 358 98 271 3.69e-16 80.1
Msa0788660 AT3G51340.2 26.295 251 162 8 190 427 102 342 4.09e-16 81.3
Msa0788660 AT3G51360.6 30.000 180 109 6 190 358 98 271 4.19e-16 80.9
Msa0788660 AT3G51360.10 30.000 180 109 6 190 358 88 261 4.29e-16 80.9
Msa0788660 AT3G51360.4 30.000 180 109 6 190 358 88 261 4.30e-16 80.5
Msa0788660 AT3G51360.5 30.000 180 109 6 190 358 98 271 4.66e-16 80.5
Msa0788660 AT3G51340.4 26.295 251 162 8 190 427 102 342 5.30e-16 80.1
Msa0788660 AT3G18490.1 33.333 135 82 4 181 314 152 279 7.56e-16 80.5
Msa0788660 AT3G51340.1 26.295 251 162 8 190 427 102 342 7.58e-16 80.5
Msa0788660 AT1G01300.1 26.692 266 163 11 181 430 132 381 8.53e-16 80.1
Msa0788660 AT1G31450.1 26.568 271 171 9 182 430 76 340 8.48e-15 77.0
Msa0788660 AT3G12700.1 26.493 268 170 10 182 431 97 355 1.55e-14 76.3
Msa0788660 AT2G28030.1 26.515 264 153 11 180 431 50 284 5.26e-14 74.3
Msa0788660 AT2G28220.1 25.407 307 183 13 152 442 29 305 5.86e-14 73.9
Msa0788660 AT1G25510.1 28.090 267 150 12 181 430 138 379 6.00e-14 74.3
Msa0788660 AT3G51330.2 26.087 253 161 9 190 427 101 342 6.11e-14 74.3
Msa0788660 AT3G51330.3 26.087 253 161 9 190 427 101 342 6.19e-14 74.3
Msa0788660 AT3G51330.1 26.087 253 161 9 190 427 101 342 7.81e-14 74.3
Msa0788660 AT3G61820.1 27.138 269 164 11 181 430 125 380 1.91e-13 72.8
Msa0788660 AT5G33340.1 24.719 356 199 12 189 483 88 435 6.67e-13 70.9
Msa0788660 AT3G59080.1 27.737 274 160 11 182 427 161 424 2.09e-12 69.7
Msa0788660 AT2G42980.1 27.372 274 161 12 182 427 151 414 2.42e-11 66.6
Msa0788660 AT1G09750.1 25.979 281 171 11 166 427 79 341 5.38e-11 65.1

Find 117 sgRNAs with CRISPR-Local

Find 345 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGATGTTGTTGAGAAAA+AGG 0.170750 5_2:-75908680 None:intergenic
CTGAATGACATCTAAGATTT+TGG 0.177524 5_2:-75913920 None:intergenic
AACAAAATTTAACTTGGTTT+TGG 0.209893 5_2:-75911136 None:intergenic
TCCTCAAAATTCCTACATTA+TGG 0.219424 5_2:-75913971 None:intergenic
GAGAGATTTGAAGCTTAAAT+TGG 0.223650 5_2:+75909003 Msa0788660:CDS
TTTAAGAAATATGGTGTTCT+TGG 0.252707 5_2:+75908977 Msa0788660:CDS
ATAGTGAACCATAGAGAAAA+AGG 0.278117 5_2:-75908871 None:intergenic
CCTTCAAATAACCCTTCTTT+AGG 0.280114 5_2:+75908626 Msa0788660:CDS
TTATACCAAACTGAGATTCT+TGG 0.285575 5_2:+75911933 Msa0788660:CDS
CTTTATTGCTTCTAGCTCTA+AGG 0.288888 5_2:+75909054 Msa0788660:CDS
ATCTCTAACTGCTTTACATT+TGG 0.295581 5_2:+75914175 Msa0788660:three_prime_UTR
AAAATCCTACTTACGTAGTT+TGG 0.299509 5_2:-75911481 None:intergenic
CATTTCACTGCGAGGACATT+TGG 0.309662 5_2:+75913784 Msa0788660:CDS
ACCCAAGTCATACCCCAATA+AGG 0.323305 5_2:-75911449 None:intergenic
TTCCTTGGGAGTTCTTATTA+AGG 0.332609 5_2:+75911083 Msa0788660:CDS
TTCCTCACCTCCAAGTATAA+TGG 0.346694 5_2:-75912779 None:intergenic
TGTAAAATTGTTACTAAAAG+TGG 0.356103 5_2:-75908546 None:intergenic
GTTTGCTTAGCTATCCTTGA+TGG 0.362073 5_2:+75912733 Msa0788660:CDS
AAAGAAAGTAAAAGCAGTTA+TGG 0.368422 5_2:-75908654 None:intergenic
GGTGGTGGATACATGTTCTT+AGG 0.378570 5_2:+75911413 Msa0788660:CDS
CTTCATCTTATGACTACTAA+TGG 0.381522 5_2:+75911111 Msa0788660:CDS
AGAGATTTGAAGCTTAAATT+GGG 0.382803 5_2:+75909004 Msa0788660:CDS
CTTATCAGTTAGCAAGTAAA+GGG 0.384205 5_2:+75911345 Msa0788660:CDS
CCCGAAAACAAAATTTAACT+TGG 0.384883 5_2:-75911142 None:intergenic
TCCCTTATTGGGGTATGACT+TGG 0.394100 5_2:+75911447 Msa0788660:CDS
TTGATGGGTAGGATTGGATT+GGG 0.395110 5_2:-75908763 None:intergenic
TAGGATTGGATTGGGATTGG+TGG 0.396322 5_2:-75908755 None:intergenic
AATGTTGTTGGTCATTGCTT+AGG 0.406763 5_2:+75911377 Msa0788660:CDS
TGCAGACCATAGTTCTTCCT+TGG 0.408408 5_2:+75911068 Msa0788660:CDS
CCTAAAGAAGGGTTATTTGA+AGG 0.411690 5_2:-75908626 None:intergenic
GGGCTTATTAAGAATGTTGT+TGG 0.412532 5_2:+75911365 Msa0788660:CDS
CCTTTACTTGCTAACTGATA+AGG 0.415422 5_2:-75911344 None:intergenic
GGATAAACATTGCCACTGAT+TGG 0.415505 5_2:-75909109 None:intergenic
AATTGAAGCTGAGGGTTTGA+TGG 0.420946 5_2:-75908779 None:intergenic
GATGATTCATGATCATTCAT+AGG 0.422150 5_2:-75914155 None:intergenic
CAATGAGAATGATGATAACT+TGG 0.424191 5_2:-75908490 None:intergenic
CCCTTATTGGGGTATGACTT+GGG 0.427356 5_2:+75911448 Msa0788660:CDS
AAGAATGTGAAAAGCTTTGT+TGG 0.436140 5_2:-75908830 None:intergenic
GAGGGTTTGATGGGTAGGAT+TGG 0.440136 5_2:-75908769 None:intergenic
GTCCGTAGACTCTCTATGCT+TGG 0.441887 5_2:+75910978 Msa0788660:CDS
AAGCTGAGGGTTTGATGGGT+AGG 0.446501 5_2:-75908774 None:intergenic
GGATAGTGTTGGCTTATAGA+TGG 0.447503 5_2:-75910944 None:intergenic
GACAATGTGAACAAGAATAT+TGG 0.459509 5_2:+75913815 Msa0788660:CDS
TTTGATGGAAACAGCAAAGT+AGG 0.459859 5_2:+75911984 Msa0788660:CDS
TTATTCCAAGAATCTCAGTT+TGG 0.460107 5_2:-75911938 None:intergenic
CTGATAAGGTAGGCCAACTT+TGG 0.461547 5_2:-75911330 None:intergenic
CCTTATCAGTTAGCAAGTAA+AGG 0.465935 5_2:+75911344 Msa0788660:CDS
ACATCAACAAAATATCGTTT+CGG 0.467089 5_2:-75910327 None:intergenic
AGAATGTGAAAAGCTTTGTT+GGG 0.469606 5_2:-75908829 None:intergenic
AGGTAAAATAGTCTATGTAT+AGG 0.472359 5_2:+75913943 Msa0788660:three_prime_UTR
GGGTATGACTTGGGTACCTA+TGG 0.473246 5_2:+75911457 Msa0788660:CDS
GTTCAGAAATATGAGAAGAA+TGG 0.474815 5_2:+75911003 Msa0788660:CDS
GCAGACCATAGTTCTTCCTT+GGG 0.478129 5_2:+75911069 Msa0788660:CDS
GGAAATGATGGAGTTGGTGG+TGG 0.479851 5_2:+75911398 Msa0788660:CDS
ATTGAAGCTGAGGGTTTGAT+GGG 0.481433 5_2:-75908778 None:intergenic
GGGTAGGATTGGATTGGGAT+TGG 0.484407 5_2:-75908758 None:intergenic
TTTGATGGGTAGGATTGGAT+TGG 0.487035 5_2:-75908764 None:intergenic
GATGGATCCTCCATTATACT+TGG 0.487511 5_2:+75912769 Msa0788660:CDS
GAACTCCCAAGGAAGAACTA+TGG 0.493905 5_2:-75911074 None:intergenic
TCACAGAAGCAACGAGATCC+AGG 0.495496 5_2:-75912061 None:intergenic
ATACAGGGAGTGACTTAACT+TGG 0.496915 5_2:+75910352 Msa0788660:CDS
CCCAAGTCATACCCCAATAA+GGG 0.497768 5_2:-75911448 None:intergenic
TGAGCCTTCAATATTCTGCT+TGG 0.499739 5_2:-75913863 None:intergenic
AGTGGCAATGTTTATCCAGA+TGG 0.500980 5_2:+75909115 Msa0788660:CDS
CTGAATGAAAATTGAAGCTG+AGG 0.511044 5_2:-75908788 None:intergenic
ATGTGCGTCTCGTGCAGAGA+AGG 0.512975 5_2:+75914059 Msa0788660:three_prime_UTR
CATGCCAAGCAGAATATTGA+AGG 0.517254 5_2:+75913859 Msa0788660:CDS
AGATCCAGGTACGCTTCTCT+CGG 0.520279 5_2:-75912047 None:intergenic
GAAGAAGAAGAGTGAAGAGA+GGG 0.525753 5_2:-75908518 None:intergenic
TGTGAACAAGAATATTGGTT+GGG 0.525910 5_2:+75913820 Msa0788660:CDS
GCACATTGAGTTTCGCCACT+AGG 0.526793 5_2:-75914042 None:intergenic
GTCTACGGACGGCACTATGT+TGG 0.530173 5_2:-75910965 None:intergenic
ACTTACGTAGTTTGGACCAT+AGG 0.531182 5_2:-75911473 None:intergenic
TGAAGAAGAAGAGTGAAGAG+AGG 0.531195 5_2:-75908519 None:intergenic
CATTAACATTGCTACCATCA+AGG 0.531579 5_2:-75912747 None:intergenic
AAAAGATAAAATAATACGAT+AGG 0.535835 5_2:-75914004 None:intergenic
TGTGCGTCTCGTGCAGAGAA+GGG 0.537657 5_2:+75914060 Msa0788660:three_prime_UTR
GGTCATTGCTTAGGAAATGA+TGG 0.538019 5_2:+75911386 Msa0788660:CDS
GGCACTATGTTGGATAGTGT+TGG 0.538557 5_2:-75910955 None:intergenic
GATGGTAGCAATGTTAATGA+TGG 0.544025 5_2:+75912751 Msa0788660:CDS
GAGATTCTTGGAATAAACTA+CGG 0.544989 5_2:+75911945 Msa0788660:CDS
GGATCCTCCATTATACTTGG+AGG 0.544998 5_2:+75912772 Msa0788660:CDS
TTCCAAGCATAGAGAGTCTA+CGG 0.545279 5_2:-75910980 None:intergenic
AGTGGAAGCAGAAAGCTACT+TGG 0.549739 5_2:-75908953 None:intergenic
GAATTTCATAGTCACACTGT+TGG 0.552253 5_2:-75911041 None:intergenic
TGCTTAGGAAATGATGGAGT+TGG 0.560007 5_2:+75911392 Msa0788660:CDS
ACCTTTGCACAACTTCTGCA+CGG 0.572104 5_2:-75910390 None:intergenic
CGTGGTCTCAAGAACAATGA+TGG 0.573871 5_2:+75908920 Msa0788660:CDS
GTGCGTCTCGTGCAGAGAAG+GGG 0.575106 5_2:+75914061 Msa0788660:three_prime_UTR
CAACAAAATATCGTTTCGGA+GGG 0.579679 5_2:-75910323 None:intergenic
AAAGAAGGGTTATTTGAAGG+TGG 0.579906 5_2:-75908623 None:intergenic
ACTTCTATGCTGCAGAACAA+AGG 0.581078 5_2:+75912706 Msa0788660:intron
TCAACAAAATATCGTTTCGG+AGG 0.581579 5_2:-75910324 None:intergenic
CTATGGCGTTTGATATGCAG+AGG 0.582144 5_2:-75914108 None:intergenic
GTGGCAATGTTTATCCAGAT+GGG 0.582598 5_2:+75909116 Msa0788660:CDS
ATCCTTAATAAGAACTCCCA+AGG 0.586872 5_2:-75911085 None:intergenic
TGAATGAAAATTGAAGCTGA+GGG 0.587253 5_2:-75908787 None:intergenic
CTCATGATAAAAGTTTGCTA+TGG 0.587276 5_2:-75914125 None:intergenic
TATAGGTACAGCCATAATGT+AGG 0.589993 5_2:+75913960 Msa0788660:three_prime_UTR
GAGATTTGAAGCTTAAATTG+GGG 0.590586 5_2:+75909005 Msa0788660:CDS
TTAGGAAATGATGGAGTTGG+TGG 0.594117 5_2:+75911395 Msa0788660:CDS
GGACTGAGCAGAGCCAAAGT+TGG 0.594894 5_2:+75911317 Msa0788660:CDS
TATTACACGCATTTACGTGT+CGG 0.598280 5_2:+75910297 Msa0788660:CDS
TGGAAACAGCAAAGTAGGAA+AGG 0.607216 5_2:+75911989 Msa0788660:CDS
ATGTGAACAAGAATATTGGT+TGG 0.608253 5_2:+75913819 Msa0788660:CDS
TGCGTCTCGTGCAGAGAAGG+GGG 0.620558 5_2:+75914062 Msa0788660:three_prime_UTR
CTCACCTCCAAGTATAATGG+AGG 0.623202 5_2:-75912776 None:intergenic
AAGGTGTGGATATGATCAAG+AGG 0.664812 5_2:+75911253 Msa0788660:intron
AAATCTTAGATGTCATTCAG+AGG 0.666022 5_2:+75913923 Msa0788660:three_prime_UTR
TCCGTGCAGAAGTTGTGCAA+AGG 0.670250 5_2:+75910389 Msa0788660:CDS
AAGCATAGAGAGTCTACGGA+CGG 0.675187 5_2:-75910976 None:intergenic
AGGTGTGGATATGATCAAGA+GGG 0.680410 5_2:+75911254 Msa0788660:intron
GGTTGGGAGAGAACAAAATG+TGG 0.685023 5_2:+75913836 Msa0788660:CDS
GAATGTGAAAAGCTTTGTTG+GGG 0.703440 5_2:-75908828 None:intergenic
TACTTGCTAACTGATAAGGT+AGG 0.706815 5_2:-75911340 None:intergenic
TTTGCAGACATTTCACTGCG+AGG 0.713408 5_2:+75913776 Msa0788660:intron
ACAACATTACTTGAACTACG+TGG 0.776086 5_2:+75908902 Msa0788660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCCAATTATTTTTAAATTA+CGG + chr5_2:75909780-75909799 Msa0788660:intron 10.0%
!!! TTATATCTATAAATTTTTCT+AGG + chr5_2:75912320-75912339 Msa0788660:intron 10.0%
!! TAAAAATAATTGGAAAATCT+TGG - chr5_2:75909775-75909794 None:intergenic 15.0%
!! ATCCGTAATTTAAAAATAAT+TGG - chr5_2:75909785-75909804 None:intergenic 15.0%
!!! AGGTAAGTTTTTATTAAAAA+TGG + chr5_2:75910551-75910570 Msa0788660:intron 15.0%
!! AATTATATATATCTTGTGTA+AGG + chr5_2:75910669-75910688 Msa0788660:intron 15.0%
!! ATTATATATATCTTGTGTAA+GGG + chr5_2:75910670-75910689 Msa0788660:intron 15.0%
!!! TGTAATTTTTATTATATCAG+TGG + chr5_2:75911661-75911680 Msa0788660:intron 15.0%
!!! AGTTATTTTACATTAAGATT+TGG + chr5_2:75913018-75913037 Msa0788660:intron 15.0%
!! AAAAGATAAAATAATACGAT+AGG - chr5_2:75914007-75914026 None:intergenic 15.0%
!! TGTAAAATTGTTACTAAAAG+TGG - chr5_2:75908549-75908568 None:intergenic 20.0%
!!! TAGTAACAATTTTACAGATA+TGG + chr5_2:75908553-75908572 Msa0788660:exon 20.0%
!!! TGCTTATATTTGACTTAATT+TGG + chr5_2:75909161-75909180 Msa0788660:intron 20.0%
!! AAAGATTAGAAATGGTTTAT+TGG + chr5_2:75909308-75909327 Msa0788660:intron 20.0%
!! TGATCTAAATATTATTGAGT+TGG + chr5_2:75909564-75909583 Msa0788660:intron 20.0%
!! AATGCAATTGAATATTTGAA+GGG + chr5_2:75909923-75909942 Msa0788660:intron 20.0%
!!! TCACTACTTGTATTTTTTAA+AGG + chr5_2:75910483-75910502 Msa0788660:intron 20.0%
!! AATTGTGTTGGAAATATAAA+CGG - chr5_2:75910603-75910622 None:intergenic 20.0%
!!! AACAAAATTTAACTTGGTTT+TGG - chr5_2:75911139-75911158 None:intergenic 20.0%
!!! ACCAAGTTAAATTTTGTTTT+CGG + chr5_2:75911141-75911160 Msa0788660:CDS 20.0%
!! TTGAGAAATCTACAATATAA+CGG + chr5_2:75911553-75911572 Msa0788660:intron 20.0%
!!! ATAGTTTTAAGAATCAATGT+TGG - chr5_2:75911742-75911761 None:intergenic 20.0%
!! AATGAATTCATATTCAACAT+TGG - chr5_2:75912133-75912152 None:intergenic 20.0%
!! AAAAGTTGTATTAGAAAAAG+AGG - chr5_2:75912640-75912659 None:intergenic 20.0%
!! ATTCATCAACATAAAAAACT+TGG - chr5_2:75912840-75912859 None:intergenic 20.0%
!!! AAGTTTTTTATGTTGATGAA+TGG + chr5_2:75912839-75912858 Msa0788660:intron 20.0%
!!! TTTTTTTTTTAAGATCCTAG+TGG + chr5_2:75914027-75914046 Msa0788660:three_prime_UTR 20.0%
!!! ATTTTGAATTAGTTAGCATT+TGG + chr5_2:75914205-75914224 Msa0788660:three_prime_UTR 20.0%
!!! TTATGGTTTTACCTAAAGAA+GGG - chr5_2:75908640-75908659 None:intergenic 25.0%
! AAAGAAAGTAAAAGCAGTTA+TGG - chr5_2:75908657-75908676 None:intergenic 25.0%
!!! CTTCCACTTTTTAAGAAATA+TGG + chr5_2:75908968-75908987 Msa0788660:CDS 25.0%
! ACACCATATTTCTTAAAAAG+TGG - chr5_2:75908974-75908993 None:intergenic 25.0%
! TTTAAGAAATATGGTGTTCT+TGG + chr5_2:75908977-75908996 Msa0788660:CDS 25.0%
!! AGAGATTTGAAGCTTAAATT+GGG + chr5_2:75909004-75909023 Msa0788660:CDS 25.0%
!!! TTTCCCTTTTTTGTTGTTAT+CGG + chr5_2:75909213-75909232 Msa0788660:intron 25.0%
! ATACTACGAAAGATTAGAAA+TGG + chr5_2:75909300-75909319 Msa0788660:intron 25.0%
! TTTATGATAGAACATTGTAG+CGG + chr5_2:75909599-75909618 Msa0788660:intron 25.0%
! TCTATAAGAAAACTGAGATT+GGG + chr5_2:75909690-75909709 Msa0788660:intron 25.0%
!! TTTTAAATTACGGATACAGA+TGG + chr5_2:75909790-75909809 Msa0788660:intron 25.0%
!! GGTGTAAAACTATTTTACAT+CGG + chr5_2:75909850-75909869 Msa0788660:intron 25.0%
! TCAAAAACTGTACTGTAATT+AGG + chr5_2:75909894-75909913 Msa0788660:intron 25.0%
! CAATGCAATTGAATATTTGA+AGG + chr5_2:75909922-75909941 Msa0788660:intron 25.0%
!! TTTTATATTTAAGGACTAGG+TGG + chr5_2:75909985-75910004 Msa0788660:intron 25.0%
!!! CATACAAGTTTTATAACTCT+AGG + chr5_2:75910077-75910096 Msa0788660:intron 25.0%
! ATACTCCAACTATATGATAT+AGG + chr5_2:75910189-75910208 Msa0788660:intron 25.0%
! TAGTTCCTATATCATATAGT+TGG - chr5_2:75910197-75910216 None:intergenic 25.0%
! ACATCAACAAAATATCGTTT+CGG - chr5_2:75910330-75910349 None:intergenic 25.0%
! CAAAAGTAGAAAAATTGTGT+TGG - chr5_2:75910615-75910634 None:intergenic 25.0%
!! CAACACAATTTTTCTACTTT+TGG + chr5_2:75910613-75910632 Msa0788660:intron 25.0%
! TATAAAGCTATAGTAATGTG+CGG - chr5_2:75910741-75910760 None:intergenic 25.0%
!!! TACTATAGCTTTATAGAATC+AGG + chr5_2:75910746-75910765 Msa0788660:intron 25.0%
! TCTCATAAAATTCACTTACA+TGG - chr5_2:75910876-75910895 None:intergenic 25.0%
! ACTCGAGATATAATTGATAT+AGG + chr5_2:75910912-75910931 Msa0788660:intron 25.0%
! CTCGAGATATAATTGATATA+GGG + chr5_2:75910913-75910932 Msa0788660:intron 25.0%
!!! CCAAGTTAAATTTTGTTTTC+GGG + chr5_2:75911142-75911161 Msa0788660:CDS 25.0%
!!! CTAAAGTAACTTCTGTTTTT+AGG + chr5_2:75911588-75911607 Msa0788660:intron 25.0%
! TCTGACAAAAATTATGCAAT+TGG + chr5_2:75912093-75912112 Msa0788660:intron 25.0%
! TTATCAAAACAGAGAAAAAC+TGG + chr5_2:75912467-75912486 Msa0788660:intron 25.0%
! GAACAAAAATCATTTGGAAA+TGG - chr5_2:75912667-75912686 None:intergenic 25.0%
!! TTCCAAATGATTTTTGTTCT+TGG + chr5_2:75912668-75912687 Msa0788660:intron 25.0%
! TTCCAAGAACAAAAATCATT+TGG - chr5_2:75912673-75912692 None:intergenic 25.0%
!! AAATGATTTTTGTTCTTGGA+AGG + chr5_2:75912672-75912691 Msa0788660:intron 25.0%
! AAACTTGGATAAAAACTAGA+AGG - chr5_2:75912825-75912844 None:intergenic 25.0%
!! CTATAGTAATTGACTTACAT+CGG - chr5_2:75913551-75913570 None:intergenic 25.0%
! GAGAATACTAAATGAAAATG+TGG + chr5_2:75913572-75913591 Msa0788660:intron 25.0%
! ACTTGATGCTTTCTTATATT+CGG + chr5_2:75913617-75913636 Msa0788660:intron 25.0%
! ATGTCGCAAATTAGAAAATA+AGG - chr5_2:75913678-75913697 None:intergenic 25.0%
! AGGTAAAATAGTCTATGTAT+AGG + chr5_2:75913943-75913962 Msa0788660:three_prime_UTR 25.0%
CAATGAGAATGATGATAACT+TGG - chr5_2:75908493-75908512 None:intergenic 30.0%
!!! ATAACAACACTTTTGAGTTG+TGG - chr5_2:75908593-75908612 None:intergenic 30.0%
!! GTTATGGTTTTACCTAAAGA+AGG - chr5_2:75908641-75908660 None:intergenic 30.0%
GAAGATGTTGTTGAGAAAAA+GGG - chr5_2:75908682-75908701 None:intergenic 30.0%
TGAAGATGTTGTTGAGAAAA+AGG - chr5_2:75908683-75908702 None:intergenic 30.0%
TGAATGAAAATTGAAGCTGA+GGG - chr5_2:75908790-75908809 None:intergenic 30.0%
!! AGAATGTGAAAAGCTTTGTT+GGG - chr5_2:75908832-75908851 None:intergenic 30.0%
! AAGAATGTGAAAAGCTTTGT+TGG - chr5_2:75908833-75908852 None:intergenic 30.0%
! ACAAAGCTTTTCACATTCTT+TGG + chr5_2:75908833-75908852 Msa0788660:CDS 30.0%
TAGTGAACCATAGAGAAAAA+GGG - chr5_2:75908873-75908892 None:intergenic 30.0%
ATAGTGAACCATAGAGAAAA+AGG - chr5_2:75908874-75908893 None:intergenic 30.0%
! GAGAGATTTGAAGCTTAAAT+TGG + chr5_2:75909003-75909022 Msa0788660:CDS 30.0%
! GAGATTTGAAGCTTAAATTG+GGG + chr5_2:75909005-75909024 Msa0788660:CDS 30.0%
GATCCGATAACAACAAAAAA+GGG - chr5_2:75909219-75909238 None:intergenic 30.0%
AGAAATGGTTTATTGGTCAT+AGG + chr5_2:75909315-75909334 Msa0788660:intron 30.0%
AGCACCTATAGTAAAATAGA+CGG + chr5_2:75909391-75909410 Msa0788660:intron 30.0%
! GTTTCTCTGATAGTTTTTCT+AGG - chr5_2:75909535-75909554 None:intergenic 30.0%
!! TATTGAGTTGGATCGAAATA+TGG + chr5_2:75909576-75909595 Msa0788660:intron 30.0%
! AAGCCTTATCTCACTAAATA+GGG - chr5_2:75909645-75909664 None:intergenic 30.0%
GTCTATAAGAAAACTGAGAT+TGG + chr5_2:75909689-75909708 Msa0788660:intron 30.0%
!! TAGTTTTACACTGAGTCTAA+TGG + chr5_2:75909745-75909764 Msa0788660:intron 30.0%
! AGTTTTACACTGAGTCTAAT+GGG + chr5_2:75909746-75909765 Msa0788660:intron 30.0%
GCAATATCATGAATTCTCAT+TGG + chr5_2:75909822-75909841 Msa0788660:intron 30.0%
!! ATTTGAAGGGTGTCTTAAAA+AGG + chr5_2:75909936-75909955 Msa0788660:intron 30.0%
!! TTTGAAGGGTGTCTTAAAAA+GGG + chr5_2:75909937-75909956 Msa0788660:intron 30.0%
!! GGGTTTTATATTTAAGGACT+AGG + chr5_2:75909982-75910001 Msa0788660:intron 30.0%
!!! GTTTTATAACTCTAGGATTG+AGG + chr5_2:75910084-75910103 Msa0788660:intron 30.0%
!!! GGCAAGTTTTTGTTTTGAAT+TGG + chr5_2:75910153-75910172 Msa0788660:intron 30.0%
GCATATGTAATACAGGAAAT+TGG - chr5_2:75910235-75910254 None:intergenic 30.0%
CAATGATGCATATGTAATAC+AGG - chr5_2:75910242-75910261 None:intergenic 30.0%
TTACATATGCATCATTGTGT+TGG + chr5_2:75910245-75910264 Msa0788660:intron 30.0%
! GAAACGATATTTTGTTGATG+TGG + chr5_2:75910329-75910348 Msa0788660:CDS 30.0%
! TATTTTGTTGATGTGGATAC+AGG + chr5_2:75910336-75910355 Msa0788660:CDS 30.0%
! ATTTTGTTGATGTGGATACA+GGG + chr5_2:75910337-75910356 Msa0788660:CDS 30.0%
! AGTGAAAGCATAATGACTAA+TGG - chr5_2:75910468-75910487 None:intergenic 30.0%
CATTGTTAAGCATCTAAAAG+AGG + chr5_2:75910531-75910550 Msa0788660:intron 30.0%
!! TTTTTCTACTTTTGGATTCC+TGG + chr5_2:75910621-75910640 Msa0788660:intron 30.0%
GTTCAGAAATATGAGAAGAA+TGG + chr5_2:75911003-75911022 Msa0788660:CDS 30.0%
CTTCATCTTATGACTACTAA+TGG + chr5_2:75911111-75911130 Msa0788660:CDS 30.0%
CCCGAAAACAAAATTTAACT+TGG - chr5_2:75911145-75911164 None:intergenic 30.0%
!!! TGCTGTCTTTTTTTCTCATA+AGG + chr5_2:75911180-75911199 Msa0788660:intron 30.0%
CTTATCAGTTAGCAAGTAAA+GGG + chr5_2:75911345-75911364 Msa0788660:CDS 30.0%
! TGATGATTTTGTCCCTTATT+GGG + chr5_2:75911436-75911455 Msa0788660:CDS 30.0%
AAAATCCTACTTACGTAGTT+TGG - chr5_2:75911484-75911503 None:intergenic 30.0%
ATATCAGTGGAAATGAAAAC+AGG + chr5_2:75911674-75911693 Msa0788660:intron 30.0%
GTATTCTCAAATTGGAGTTT+AGG - chr5_2:75911720-75911739 None:intergenic 30.0%
CAATGTTGGTATTCTCAAAT+TGG - chr5_2:75911728-75911747 None:intergenic 30.0%
!! CTTGTTATTTGTTGTTTCTG+AGG + chr5_2:75911853-75911872 Msa0788660:intron 30.0%
TTATACCAAACTGAGATTCT+TGG + chr5_2:75911933-75911952 Msa0788660:CDS 30.0%
TTATTCCAAGAATCTCAGTT+TGG - chr5_2:75911941-75911960 None:intergenic 30.0%
GAGATTCTTGGAATAAACTA+CGG + chr5_2:75911945-75911964 Msa0788660:CDS 30.0%
TCATATTCAACATTGGACTT+TGG - chr5_2:75912126-75912145 None:intergenic 30.0%
!!! GTATTTGGTTTTTGTAATGC+TGG + chr5_2:75912286-75912305 Msa0788660:intron 30.0%
CAGCATAGAAGTTTATTAGA+AGG - chr5_2:75912698-75912717 None:intergenic 30.0%
! TGTTGATAAATAACTCAGCT+AGG + chr5_2:75912929-75912948 Msa0788660:intron 30.0%
TAAATAACTCAGCTAGGATT+AGG + chr5_2:75912935-75912954 Msa0788660:intron 30.0%
! TAGGTCATTAAGTGTTATTG+AGG + chr5_2:75912954-75912973 Msa0788660:intron 30.0%
CCTTATGACTTATACTTATC+CGG + chr5_2:75913239-75913258 Msa0788660:intron 30.0%
CTAATATAGAGTTAGATAGC+CGG - chr5_2:75913261-75913280 None:intergenic 30.0%
GACAATGTGAACAAGAATAT+TGG + chr5_2:75913815-75913834 Msa0788660:CDS 30.0%
ATGTGAACAAGAATATTGGT+TGG + chr5_2:75913819-75913838 Msa0788660:CDS 30.0%
! TGTGAACAAGAATATTGGTT+GGG + chr5_2:75913820-75913839 Msa0788660:CDS 30.0%
!! CTGAATGACATCTAAGATTT+TGG - chr5_2:75913923-75913942 None:intergenic 30.0%
AAATCTTAGATGTCATTCAG+AGG + chr5_2:75913923-75913942 Msa0788660:three_prime_UTR 30.0%
TCCTCAAAATTCCTACATTA+TGG - chr5_2:75913974-75913993 None:intergenic 30.0%
!! CTCATGATAAAAGTTTGCTA+TGG - chr5_2:75914128-75914147 None:intergenic 30.0%
GATGATTCATGATCATTCAT+AGG - chr5_2:75914158-75914177 None:intergenic 30.0%
ATCTCTAACTGCTTTACATT+TGG + chr5_2:75914175-75914194 Msa0788660:three_prime_UTR 30.0%
AAAGAAGGGTTATTTGAAGG+TGG - chr5_2:75908626-75908645 None:intergenic 35.0%
CCTAAAGAAGGGTTATTTGA+AGG - chr5_2:75908629-75908648 None:intergenic 35.0%
CCTTCAAATAACCCTTCTTT+AGG + chr5_2:75908626-75908645 Msa0788660:CDS 35.0%
!! ATTGGTGGATCATTGTTTTG+AGG - chr5_2:75908743-75908762 None:intergenic 35.0%
CTGAATGAAAATTGAAGCTG+AGG - chr5_2:75908791-75908810 None:intergenic 35.0%
!! GAATGTGAAAAGCTTTGTTG+GGG - chr5_2:75908831-75908850 None:intergenic 35.0%
ACAACATTACTTGAACTACG+TGG + chr5_2:75908902-75908921 Msa0788660:CDS 35.0%
!! CTTTATTGCTTCTAGCTCTA+AGG + chr5_2:75909054-75909073 Msa0788660:CDS 35.0%
! CGATTTTTAACATACCCATC+TGG - chr5_2:75909133-75909152 None:intergenic 35.0%
CGATCCGATAACAACAAAAA+AGG - chr5_2:75909220-75909239 None:intergenic 35.0%
TTGGTCATAGGAAAACTAGA+CGG + chr5_2:75909327-75909346 Msa0788660:intron 35.0%
ACCTATAGTAAAATAGACGG+TGG + chr5_2:75909394-75909413 Msa0788660:intron 35.0%
! TCCACCGTCTATTTTACTAT+AGG - chr5_2:75909398-75909417 None:intergenic 35.0%
TAAAATAGACGGTGGAAACT+GGG + chr5_2:75909402-75909421 Msa0788660:intron 35.0%
TCAGATGACTCAGATCATTA+GGG + chr5_2:75909498-75909517 Msa0788660:intron 35.0%
CTTATCTCACTAAATAGGGT+CGG - chr5_2:75909641-75909660 None:intergenic 35.0%
! CAAGCCTTATCTCACTAAAT+AGG - chr5_2:75909646-75909665 None:intergenic 35.0%
CATGAATTCTCATTGGATGT+CGG + chr5_2:75909829-75909848 Msa0788660:intron 35.0%
!! TTGAAGGGTGTCTTAAAAAG+GGG + chr5_2:75909938-75909957 Msa0788660:intron 35.0%
!!! GACAAGAATTTTTTTCGCGA+GGG + chr5_2:75909962-75909981 Msa0788660:intron 35.0%
!! TCGCGAGGGTTTTATATTTA+AGG + chr5_2:75909976-75909995 Msa0788660:intron 35.0%
ATAGGTTCAAATATCCTCCA+TGG + chr5_2:75910115-75910134 Msa0788660:intron 35.0%
CTCCATGGTAAACAAAGAAA+GGG + chr5_2:75910130-75910149 Msa0788660:intron 35.0%
TCCATGGTAAACAAAGAAAG+GGG + chr5_2:75910131-75910150 Msa0788660:intron 35.0%
! AGTTGGAGTATCTTAGTTCT+AGG - chr5_2:75910180-75910199 None:intergenic 35.0%
TATTACACGCATTTACGTGT+CGG + chr5_2:75910297-75910316 Msa0788660:CDS 35.0%
CAACAAAATATCGTTTCGGA+GGG - chr5_2:75910326-75910345 None:intergenic 35.0%
TCAACAAAATATCGTTTCGG+AGG - chr5_2:75910327-75910346 None:intergenic 35.0%
TAATCCATCTCAATATGCAG+AGG - chr5_2:75910434-75910453 None:intergenic 35.0%
GCATAATGACTAATGGTTTC+TGG - chr5_2:75910461-75910480 None:intergenic 35.0%
TATCTTGTGTAAGGGTAAAG+TGG + chr5_2:75910678-75910697 Msa0788660:intron 35.0%
GAATTTCATAGTCACACTGT+TGG - chr5_2:75911044-75911063 None:intergenic 35.0%
TTCCTTGGGAGTTCTTATTA+AGG + chr5_2:75911083-75911102 Msa0788660:CDS 35.0%
ATCCTTAATAAGAACTCCCA+AGG - chr5_2:75911088-75911107 None:intergenic 35.0%
AACACATTGGCAAAAACAGA+TGG + chr5_2:75911287-75911306 Msa0788660:CDS 35.0%
GCAAAAACAGATGGAATCAT+GGG + chr5_2:75911296-75911315 Msa0788660:CDS 35.0%
! TACTTGCTAACTGATAAGGT+AGG - chr5_2:75911343-75911362 None:intergenic 35.0%
! CCTTTACTTGCTAACTGATA+AGG - chr5_2:75911347-75911366 None:intergenic 35.0%
CCTTATCAGTTAGCAAGTAA+AGG + chr5_2:75911344-75911363 Msa0788660:CDS 35.0%
GGGCTTATTAAGAATGTTGT+TGG + chr5_2:75911365-75911384 Msa0788660:CDS 35.0%
AATGTTGTTGGTCATTGCTT+AGG + chr5_2:75911377-75911396 Msa0788660:CDS 35.0%
! GTGATGATTTTGTCCCTTAT+TGG + chr5_2:75911435-75911454 Msa0788660:CDS 35.0%
! GATGATTTTGTCCCTTATTG+GGG + chr5_2:75911437-75911456 Msa0788660:CDS 35.0%
CAGGAAACAGATGAAGTAAT+CGG + chr5_2:75911693-75911712 Msa0788660:intron 35.0%
!! AATCGTCTTCTCAGTTTTGA+TGG + chr5_2:75911969-75911988 Msa0788660:CDS 35.0%
TTTGATGGAAACAGCAAAGT+AGG + chr5_2:75911984-75912003 Msa0788660:CDS 35.0%
! GGAAAGGTGATTTTTGATAG+TGG + chr5_2:75912005-75912024 Msa0788660:CDS 35.0%
ATGCAGCTTAAAGAAGTTTC+TGG + chr5_2:75912165-75912184 Msa0788660:intron 35.0%
TGCAGCTTAAAGAAGTTTCT+GGG + chr5_2:75912166-75912185 Msa0788660:intron 35.0%
! CTTAAAGAAGTTTCTGGGTT+GGG + chr5_2:75912171-75912190 Msa0788660:intron 35.0%
! TTAAAGAAGTTTCTGGGTTG+GGG + chr5_2:75912172-75912191 Msa0788660:intron 35.0%
ACAAATTGGCAAAGTTGTGT+CGG - chr5_2:75912214-75912233 None:intergenic 35.0%
ACACAACTTTGCCAATTTGT+TGG + chr5_2:75912214-75912233 Msa0788660:intron 35.0%
! AAATTAGCCTGCCAACAAAT+TGG - chr5_2:75912228-75912247 None:intergenic 35.0%
! GCGATTTCTTTTACCTGATT+GGG - chr5_2:75912251-75912270 None:intergenic 35.0%
! AGCGATTTCTTTTACCTGAT+TGG - chr5_2:75912252-75912271 None:intergenic 35.0%
AATCAGGTAAAAGAAATCGC+TGG + chr5_2:75912251-75912270 Msa0788660:intron 35.0%
TGGAGGTGAAATTCAGTATT+TGG + chr5_2:75912271-75912290 Msa0788660:intron 35.0%
AGATCTGCATGCATATAACA+CGG - chr5_2:75912501-75912520 None:intergenic 35.0%
! AAGACATTAACGCTTCGTTT+TGG + chr5_2:75912545-75912564 Msa0788660:intron 35.0%
!!! TTCGTTTTGGAAACAAATGG+TGG + chr5_2:75912558-75912577 Msa0788660:intron 35.0%
! GGATTTTGTCCACATTGTTT+CGG + chr5_2:75912579-75912598 Msa0788660:intron 35.0%
CATTAACATTGCTACCATCA+AGG - chr5_2:75912750-75912769 None:intergenic 35.0%
GATGGTAGCAATGTTAATGA+TGG + chr5_2:75912751-75912770 Msa0788660:CDS 35.0%
CCGGATAAGTATAAGTCATA+AGG - chr5_2:75913242-75913261 None:intergenic 35.0%
ATTATCCGACTGATCACTTT+CGG - chr5_2:75913328-75913347 None:intergenic 35.0%
GTCAAACCATACTTATCTTC+CGG + chr5_2:75913503-75913522 Msa0788660:intron 35.0%
! ATTGACTTACATCGGAAAAG+AGG - chr5_2:75913543-75913562 None:intergenic 35.0%
TATAGGTACAGCCATAATGT+AGG + chr5_2:75913960-75913979 Msa0788660:three_prime_UTR 35.0%
! GCCATAATGTAGGAATTTTG+AGG + chr5_2:75913970-75913989 Msa0788660:three_prime_UTR 35.0%
GAAGAAGAAGAGTGAAGAGA+GGG - chr5_2:75908521-75908540 None:intergenic 40.0%
TGAAGAAGAAGAGTGAAGAG+AGG - chr5_2:75908522-75908541 None:intergenic 40.0%
! TTGATGGGTAGGATTGGATT+GGG - chr5_2:75908766-75908785 None:intergenic 40.0%
! TTTGATGGGTAGGATTGGAT+TGG - chr5_2:75908767-75908786 None:intergenic 40.0%
ATTGAAGCTGAGGGTTTGAT+GGG - chr5_2:75908781-75908800 None:intergenic 40.0%
AATTGAAGCTGAGGGTTTGA+TGG - chr5_2:75908782-75908801 None:intergenic 40.0%
! CTCTTTGCCCTTTTTCTCTA+TGG + chr5_2:75908863-75908882 Msa0788660:CDS 40.0%
!!! TCTGCTGTTTTTCCAATCAG+TGG + chr5_2:75909097-75909116 Msa0788660:CDS 40.0%
GGATAAACATTGCCACTGAT+TGG - chr5_2:75909112-75909131 None:intergenic 40.0%
AGTGGCAATGTTTATCCAGA+TGG + chr5_2:75909115-75909134 Msa0788660:CDS 40.0%
GTGGCAATGTTTATCCAGAT+GGG + chr5_2:75909116-75909135 Msa0788660:CDS 40.0%
TGGTCATAGGAAAACTAGAC+GGG + chr5_2:75909328-75909347 Msa0788660:intron 40.0%
CAACATTCGAGAGACAATTG+AGG + chr5_2:75909367-75909386 Msa0788660:intron 40.0%
GTAAAATAGACGGTGGAAAC+TGG + chr5_2:75909401-75909420 Msa0788660:intron 40.0%
GAAACTGGGTTTAAGTGGTT+TGG + chr5_2:75909416-75909435 Msa0788660:intron 40.0%
CTCCTTACTGCATAATCTCT+GGG - chr5_2:75909457-75909476 None:intergenic 40.0%
TCTCCTTACTGCATAATCTC+TGG - chr5_2:75909458-75909477 None:intergenic 40.0%
AGTAAGGAGAGTAGATCAGA+TGG + chr5_2:75909468-75909487 Msa0788660:intron 40.0%
GTCAGATGACTCAGATCATT+AGG + chr5_2:75909497-75909516 Msa0788660:intron 40.0%
CAGATGACTCAGATCATTAG+GGG + chr5_2:75909499-75909518 Msa0788660:intron 40.0%
CGACCCTATTTAGTGAGATA+AGG + chr5_2:75909639-75909658 Msa0788660:intron 40.0%
AAAACTGAGATTGGGTCACT+CGG + chr5_2:75909698-75909717 Msa0788660:intron 40.0%
!! TGAAGGGTGTCTTAAAAAGG+GGG + chr5_2:75909939-75909958 Msa0788660:intron 40.0%
!!! GGACAAGAATTTTTTTCGCG+AGG + chr5_2:75909961-75909980 Msa0788660:intron 40.0%
ATACTGATGCACTACAGTGT+AGG - chr5_2:75910057-75910076 None:intergenic 40.0%
AGGATTGAGGTCATACTCAT+AGG + chr5_2:75910097-75910116 Msa0788660:intron 40.0%
! CCTTTCTTTGTTTACCATGG+AGG - chr5_2:75910132-75910151 None:intergenic 40.0%
CCTCCATGGTAAACAAAGAA+AGG + chr5_2:75910129-75910148 Msa0788660:intron 40.0%
CCATGGTAAACAAAGAAAGG+GGG + chr5_2:75910132-75910151 Msa0788660:intron 40.0%
ATACAGGGAGTGACTTAACT+TGG + chr5_2:75910352-75910371 Msa0788660:CDS 40.0%
GTTACCTCTGCATATTGAGA+TGG + chr5_2:75910427-75910446 Msa0788660:intron 40.0%
TTAGATGCTTAACAATGCCC+CGG - chr5_2:75910528-75910547 None:intergenic 40.0%
TTACAGTACATCTAGCTGAG+AGG - chr5_2:75910826-75910845 None:intergenic 40.0%
!! GGATAGTGTTGGCTTATAGA+TGG - chr5_2:75910947-75910966 None:intergenic 40.0%
TTCCAAGCATAGAGAGTCTA+CGG - chr5_2:75910983-75911002 None:intergenic 40.0%
AACATCCACATCGTGTAGAA+TGG - chr5_2:75911231-75911250 None:intergenic 40.0%
TACACGATGTGGATGTTGTA+AGG + chr5_2:75911234-75911253 Msa0788660:intron 40.0%
AAGGTGTGGATATGATCAAG+AGG + chr5_2:75911253-75911272 Msa0788660:intron 40.0%
AGGTGTGGATATGATCAAGA+GGG + chr5_2:75911254-75911273 Msa0788660:intron 40.0%
GGCAAAAACAGATGGAATCA+TGG + chr5_2:75911295-75911314 Msa0788660:CDS 40.0%
GGTCATTGCTTAGGAAATGA+TGG + chr5_2:75911386-75911405 Msa0788660:CDS 40.0%
! TGCTTAGGAAATGATGGAGT+TGG + chr5_2:75911392-75911411 Msa0788660:CDS 40.0%
! TTAGGAAATGATGGAGTTGG+TGG + chr5_2:75911395-75911414 Msa0788660:CDS 40.0%
ACTTACGTAGTTTGGACCAT+AGG - chr5_2:75911476-75911495 None:intergenic 40.0%
ATGGTCCAAACTACGTAAGT+AGG + chr5_2:75911476-75911495 Msa0788660:intron 40.0%
GTGAATGCCAACATTCTGTT+TGG + chr5_2:75911826-75911845 Msa0788660:intron 40.0%
AAGTGCTCCAAACAGAATGT+TGG - chr5_2:75911836-75911855 None:intergenic 40.0%
TGGAAACAGCAAAGTAGGAA+AGG + chr5_2:75911989-75912008 Msa0788660:CDS 40.0%
! GCTTAAAGAAGTTTCTGGGT+TGG + chr5_2:75912170-75912189 Msa0788660:intron 40.0%
!! AACTTTGCCAATTTGTTGGC+AGG + chr5_2:75912218-75912237 Msa0788660:intron 40.0%
CAGATCTGTCAAAGATGTCA+AGG + chr5_2:75912514-75912533 Msa0788660:intron 40.0%
!!! CGCTTCGTTTTGGAAACAAA+TGG + chr5_2:75912555-75912574 Msa0788660:intron 40.0%
CTAATGATCAAGTAACCCTC+CGG - chr5_2:75912611-75912630 None:intergenic 40.0%
ACTTCTATGCTGCAGAACAA+AGG + chr5_2:75912706-75912725 Msa0788660:intron 40.0%
GTTTGCTTAGCTATCCTTGA+TGG + chr5_2:75912733-75912752 Msa0788660:CDS 40.0%
GATGGATCCTCCATTATACT+TGG + chr5_2:75912769-75912788 Msa0788660:CDS 40.0%
TTCCTCACCTCCAAGTATAA+TGG - chr5_2:75912782-75912801 None:intergenic 40.0%
TTACACCTCTTCTCTGCTTA+AGG + chr5_2:75913282-75913301 Msa0788660:intron 40.0%
TGTAACCTTAAGCAGAGAAG+AGG - chr5_2:75913290-75913309 None:intergenic 40.0%
TGATACCGAAAGTGATCAGT+CGG + chr5_2:75913320-75913339 Msa0788660:intron 40.0%
CATGCCAAGCAGAATATTGA+AGG + chr5_2:75913859-75913878 Msa0788660:CDS 40.0%
TGAGCCTTCAATATTCTGCT+TGG - chr5_2:75913866-75913885 None:intergenic 40.0%
! TAGGATTGGATTGGGATTGG+TGG - chr5_2:75908758-75908777 None:intergenic 45.0%
CGTGGTCTCAAGAACAATGA+TGG + chr5_2:75908920-75908939 Msa0788660:CDS 45.0%
AGTGGAAGCAGAAAGCTACT+TGG - chr5_2:75908956-75908975 None:intergenic 45.0%
AGCCCAGAGATTATGCAGTA+AGG + chr5_2:75909452-75909471 Msa0788660:intron 45.0%
AAGGAGAGTAGATCAGATGG+AGG + chr5_2:75909471-75909490 Msa0788660:intron 45.0%
ACTCAGATCATTAGGGGTAG+AGG + chr5_2:75909505-75909524 Msa0788660:intron 45.0%
AAACTGAGATTGGGTCACTC+GGG + chr5_2:75909699-75909718 Msa0788660:intron 45.0%
TCGGGGCATACACATTATCA+GGG + chr5_2:75909717-75909736 Msa0788660:intron 45.0%
!! GAAGGGTGTCTTAAAAAGGG+GGG + chr5_2:75909940-75909959 Msa0788660:intron 45.0%
! CCCCCTTTCTTTGTTTACCA+TGG - chr5_2:75910135-75910154 None:intergenic 45.0%
TGCGTGTAATACAACCTGCA+CGG - chr5_2:75910288-75910307 None:intergenic 45.0%
ACCTTTGCACAACTTCTGCA+CGG - chr5_2:75910393-75910412 None:intergenic 45.0%
TAGATGCTTAACAATGCCCC+GGG - chr5_2:75910527-75910546 None:intergenic 45.0%
! TACTTTTGGATTCCTGGCAC+TGG + chr5_2:75910627-75910646 Msa0788660:intron 45.0%
GTAAGGGTAAAGTGGAGCTT+TGG + chr5_2:75910686-75910705 Msa0788660:intron 45.0%
GGCACTATGTTGGATAGTGT+TGG - chr5_2:75910958-75910977 None:intergenic 45.0%
AAGCATAGAGAGTCTACGGA+CGG - chr5_2:75910979-75910998 None:intergenic 45.0%
TGCAGACCATAGTTCTTCCT+TGG + chr5_2:75911068-75911087 Msa0788660:CDS 45.0%
GCAGACCATAGTTCTTCCTT+GGG + chr5_2:75911069-75911088 Msa0788660:CDS 45.0%
GAACTCCCAAGGAAGAACTA+TGG - chr5_2:75911077-75911096 None:intergenic 45.0%
CTGATCCATTCTACACGATG+TGG + chr5_2:75911223-75911242 Msa0788660:intron 45.0%
GATGTGGATGTTGTAAGGTG+TGG + chr5_2:75911239-75911258 Msa0788660:intron 45.0%
! GGGCATGCTTTTGAACACAT+TGG + chr5_2:75911274-75911293 Msa0788660:CDS 45.0%
CTGATAAGGTAGGCCAACTT+TGG - chr5_2:75911333-75911352 None:intergenic 45.0%
!! GGTGGTGGATACATGTTCTT+AGG + chr5_2:75911413-75911432 Msa0788660:CDS 45.0%
TCCCTTATTGGGGTATGACT+TGG + chr5_2:75911447-75911466 Msa0788660:CDS 45.0%
CCCAAGTCATACCCCAATAA+GGG - chr5_2:75911451-75911470 None:intergenic 45.0%
CCCTTATTGGGGTATGACTT+GGG + chr5_2:75911448-75911467 Msa0788660:CDS 45.0%
ACCCAAGTCATACCCCAATA+AGG - chr5_2:75911452-75911471 None:intergenic 45.0%
CAGGTAAAAGAAATCGCTGG+AGG + chr5_2:75912254-75912273 Msa0788660:intron 45.0%
GGATCCTCCATTATACTTGG+AGG + chr5_2:75912772-75912791 Msa0788660:CDS 45.0%
CTCACCTCCAAGTATAATGG+AGG - chr5_2:75912779-75912798 None:intergenic 45.0%
CTCCATTATACTTGGAGGTG+AGG + chr5_2:75912777-75912796 Msa0788660:intron 45.0%
GATGAGCCGGAAGATAAGTA+TGG - chr5_2:75913512-75913531 None:intergenic 45.0%
AGAGGAGCTAATAGATGAGC+CGG - chr5_2:75913525-75913544 None:intergenic 45.0%
TTTGCAGACATTTCACTGCG+AGG + chr5_2:75913776-75913795 Msa0788660:intron 45.0%
CATTTCACTGCGAGGACATT+TGG + chr5_2:75913784-75913803 Msa0788660:CDS 45.0%
GGTTGGGAGAGAACAAAATG+TGG + chr5_2:75913836-75913855 Msa0788660:CDS 45.0%
CTATGGCGTTTGATATGCAG+AGG - chr5_2:75914111-75914130 None:intergenic 45.0%
!!! GATATATATAATTTTAAAAA+GGG - chr5_2:75910662-75910681 None:intergenic 5.0%
!!! AGATATATATAATTTTAAAA+AGG - chr5_2:75910663-75910682 None:intergenic 5.0%
! GGGTAGGATTGGATTGGGAT+TGG - chr5_2:75908761-75908780 None:intergenic 50.0%
! GAGGGTTTGATGGGTAGGAT+TGG - chr5_2:75908772-75908791 None:intergenic 50.0%
! AAGCTGAGGGTTTGATGGGT+AGG - chr5_2:75908777-75908796 None:intergenic 50.0%
CGGTGGAAACTGGGTTTAAG+TGG + chr5_2:75909411-75909430 Msa0788660:intron 50.0%
AACTGAGATTGGGTCACTCG+GGG + chr5_2:75909700-75909719 Msa0788660:intron 50.0%
CTCGGGGCATACACATTATC+AGG + chr5_2:75909716-75909735 Msa0788660:intron 50.0%
! CGGATACAGATGGACTTACG+TGG + chr5_2:75909800-75909819 Msa0788660:intron 50.0%
AGCAACATGTTCTTCCGTGC+AGG + chr5_2:75910271-75910290 Msa0788660:intron 50.0%
TCCGTGCAGAAGTTGTGCAA+AGG + chr5_2:75910389-75910408 Msa0788660:CDS 50.0%
AGAATGTTAACCAGTGCCCC+CGG + chr5_2:75910506-75910525 Msa0788660:intron 50.0%
AGATGCTTAACAATGCCCCG+GGG - chr5_2:75910526-75910545 None:intergenic 50.0%
GTCCGTAGACTCTCTATGCT+TGG + chr5_2:75910978-75910997 Msa0788660:CDS 50.0%
!! GGAAATGATGGAGTTGGTGG+TGG + chr5_2:75911398-75911417 Msa0788660:CDS 50.0%
! GGGTATGACTTGGGTACCTA+TGG + chr5_2:75911457-75911476 Msa0788660:CDS 50.0%
!! TTTTCCGAGAGAAGCGTACC+TGG + chr5_2:75912043-75912062 Msa0788660:CDS 50.0%
AGATCCAGGTACGCTTCTCT+CGG - chr5_2:75912050-75912069 None:intergenic 50.0%
TCACAGAAGCAACGAGATCC+AGG - chr5_2:75912064-75912083 None:intergenic 50.0%
GGCAGGCTAATTTCCCAATC+AGG + chr5_2:75912235-75912254 Msa0788660:intron 50.0%
CACATTGTTTCGGATACCGC+CGG + chr5_2:75912589-75912608 Msa0788660:intron 50.0%
ATGATCAAGTAACCCTCCGG+CGG - chr5_2:75912608-75912627 None:intergenic 50.0%
GCACATTGAGTTTCGCCACT+AGG - chr5_2:75914045-75914064 None:intergenic 50.0%
GAATGTTAACCAGTGCCCCC+GGG + chr5_2:75910507-75910526 Msa0788660:intron 55.0%
AATGTTAACCAGTGCCCCCG+GGG + chr5_2:75910508-75910527 Msa0788660:intron 55.0%
GATGCTTAACAATGCCCCGG+GGG - chr5_2:75910525-75910544 None:intergenic 55.0%
!! GGGTCTTGTTAACCAGTGCC+AGG - chr5_2:75910642-75910661 None:intergenic 55.0%
GTCTACGGACGGCACTATGT+TGG - chr5_2:75910968-75910987 None:intergenic 55.0%
GGACTGAGCAGAGCCAAAGT+TGG + chr5_2:75911317-75911336 Msa0788660:CDS 55.0%
CGGCGGTATCCGAAACAATG+TGG - chr5_2:75912591-75912610 None:intergenic 55.0%
ATTGTTTCGGATACCGCCGG+AGG + chr5_2:75912592-75912611 Msa0788660:intron 55.0%
TTGTTTCGGATACCGCCGGA+GGG + chr5_2:75912593-75912612 Msa0788660:intron 55.0%
ATGTGCGTCTCGTGCAGAGA+AGG + chr5_2:75914059-75914078 Msa0788660:three_prime_UTR 55.0%
TGTGCGTCTCGTGCAGAGAA+GGG + chr5_2:75914060-75914079 Msa0788660:three_prime_UTR 55.0%
! GCAGAGAAGGGGGTGTATTG+TGG + chr5_2:75914072-75914091 Msa0788660:three_prime_UTR 55.0%
GTGCGTCTCGTGCAGAGAAG+GGG + chr5_2:75914061-75914080 Msa0788660:three_prime_UTR 60.0%
TGCGTCTCGTGCAGAGAAGG+GGG + chr5_2:75914062-75914081 Msa0788660:three_prime_UTR 60.0%
! TAACAATGCCCCGGGGGCAC+TGG - chr5_2:75910519-75910538 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 75908485 75914266 75908485 ID=Msa0788660;Name=Msa0788660
chr5_2 mRNA 75908485 75914266 75908485 ID=Msa0788660-mRNA-1;Parent=Msa0788660;Name=Msa0788660-mRNA-1;_AED=0.08;_eAED=0.08;_QI=87|0.83|1|1|1|1|7|353|500
chr5_2 exon 75908485 75909137 75908485 ID=Msa0788660-mRNA-1:exon:23073;Parent=Msa0788660-mRNA-1
chr5_2 exon 75910293 75910410 75910293 ID=Msa0788660-mRNA-1:exon:23074;Parent=Msa0788660-mRNA-1
chr5_2 exon 75910934 75911163 75910934 ID=Msa0788660-mRNA-1:exon:23075;Parent=Msa0788660-mRNA-1
chr5_2 exon 75911256 75911489 75911256 ID=Msa0788660-mRNA-1:exon:23076;Parent=Msa0788660-mRNA-1
chr5_2 exon 75911929 75912079 75911929 ID=Msa0788660-mRNA-1:exon:23077;Parent=Msa0788660-mRNA-1
chr5_2 exon 75912721 75912793 75912721 ID=Msa0788660-mRNA-1:exon:23078;Parent=Msa0788660-mRNA-1
chr5_2 exon 75913783 75914266 75913783 ID=Msa0788660-mRNA-1:exon:23079;Parent=Msa0788660-mRNA-1
chr5_2 five_prime_UTR 75908485 75908571 75908485 ID=Msa0788660-mRNA-1:five_prime_utr;Parent=Msa0788660-mRNA-1
chr5_2 CDS 75908572 75909137 75908572 ID=Msa0788660-mRNA-1:cds;Parent=Msa0788660-mRNA-1
chr5_2 CDS 75910293 75910410 75910293 ID=Msa0788660-mRNA-1:cds;Parent=Msa0788660-mRNA-1
chr5_2 CDS 75910934 75911163 75910934 ID=Msa0788660-mRNA-1:cds;Parent=Msa0788660-mRNA-1
chr5_2 CDS 75911256 75911489 75911256 ID=Msa0788660-mRNA-1:cds;Parent=Msa0788660-mRNA-1
chr5_2 CDS 75911929 75912079 75911929 ID=Msa0788660-mRNA-1:cds;Parent=Msa0788660-mRNA-1
chr5_2 CDS 75912721 75912793 75912721 ID=Msa0788660-mRNA-1:cds;Parent=Msa0788660-mRNA-1
chr5_2 CDS 75913783 75913913 75913783 ID=Msa0788660-mRNA-1:cds;Parent=Msa0788660-mRNA-1
chr5_2 three_prime_UTR 75913914 75914266 75913914 ID=Msa0788660-mRNA-1:three_prime_utr;Parent=Msa0788660-mRNA-1
Gene Sequence

>Msa0788660

ATGGAAGATGATGAATCACCACAACTCAAAAGTGTTGTTATAATTTCTCTTCCACCTTCAAATAACCCTTCTTTAGGTAAAACCATAACTGCTTTTACTTTCTTTAACCCTTTTTCTCAACAACATCTTCATCGACAACATCATCAACAACAACAAGAACATGAACAACCTCAAAACAATGATCCACCAATCCCAATCCAATCCTACCCATCAAACCCTCAGCTTCAATTTTCATTCAGAAGACTCTTTCACATCACCCCAACAAAGCTTTTCACATTCTTTGGCATTTTTCTCTTTGCCCTTTTTCTCTATGGTTCACTATTTTCAACTACAACATTACTTGAACTACGTGGTCTCAAGAACAATGATGGTGATGATGAACCAAGTAGCTTTCTGCTTCCACTTTTTAAGAAATATGGTGTTCTTGGTCAGAGAGATTTGAAGCTTAAATTGGGGAAGATTGTTGATGTTAAAAAAAGAAACTTTATTGCTTCTAGCTCTAAGGTTGTAGCTGTTGACTCTTCATCTGCTGTTTTTCCAATCAGTGGCAATGTTTATCCAGATGGGTTGTATTACACGCATTTACGTGTCGGAAACCCTCCGAAACGATATTTTGTTGATGTGGATACAGGGAGTGACTTAACTTGGATTCAGTGTGATGCTCCGTGCAGAAGTTGTGCAAAGGGAGCAAATGCCATCTATAAGCCAACACTATCCAACATAGTGCCGTCCGTAGACTCTCTATGCTTGGAAGTTCAGAAATATGAGAAGAATGGATACGATGAAAACTTCCAACAGTGTGACTATGAAATTCAATATGCAGACCATAGTTCTTCCTTGGGAGTTCTTATTAAGGATGATCTTCATCTTATGACTACTAATGGATCCAAAACCAAGTTAAATTTTGTTTTCGGGTGTGGATATGATCAAGAGGGCATGCTTTTGAACACATTGGCAAAAACAGATGGAATCATGGGACTGAGCAGAGCCAAAGTTGGCCTACCTTATCAGTTAGCAAGTAAAGGGCTTATTAAGAATGTTGTTGGTCATTGCTTAGGAAATGATGGAGTTGGTGGTGGATACATGTTCTTAGGTGATGATTTTGTCCCTTATTGGGGTATGACTTGGGTACCTATGGTCCAAACTACAGATTTATACCAAACTGAGATTCTTGGAATAAACTACGGAAATCGTCTTCTCAGTTTTGATGGAAACAGCAAAGTAGGAAAGGTGATTTTTGATAGTGGCAGTTCTTATACGTATTTTCCGAGAGAAGCGTACCTGGATCTCGTTGCTTCTAACAAAGGCAATGTTTGCTTAGCTATCCTTGATGGTAGCAATGTTAATGATGGATCCTCCATTATACTTGGAGACATTTCACTGCGAGGACATTTGGTTGTGTATGACAATGTGAACAAGAATATTGGTTGGGAGAGAACAAAATGTGGCATGCCAAGCAGAATATTGAAGGCTCACAATTTCTTAAGTGATAGTATGTTATGA
Protein sequence

>Msa0788660

MEDDESPQLKSVVIISLPPSNNPSLGKTITAFTFFNPFSQQHLHRQHHQQQQEHEQPQNNDPPIPIQSYPSNPQLQFSFRRLFHITPTKLFTFFGIFLFALFLYGSLFSTTTLLELRGLKNNDGDDEPSSFLLPLFKKYGVLGQRDLKLKLGKIVDVKKRNFIASSSKVVAVDSSSAVFPISGNVYPDGLYYTHLRVGNPPKRYFVDVDTGSDLTWIQCDAPCRSCAKGANAIYKPTLSNIVPSVDSLCLEVQKYEKNGYDENFQQCDYEIQYADHSSSLGVLIKDDLHLMTTNGSKTKLNFVFGCGYDQEGMLLNTLAKTDGIMGLSRAKVGLPYQLASKGLIKNVVGHCLGNDGVGGGYMFLGDDFVPYWGMTWVPMVQTTDLYQTEILGINYGNRLLSFDGNSKVGKVIFDSGSSYTYFPREAYLDLVASNKGNVCLAILDGSNVNDGSSIILGDISLRGHLVVYDNVNKNIGWERTKCGMPSRILKAHNFLSDSML*