AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0790580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0790580 MtrunA17_Chr2g0276741 98.452 1098 11 1 1 1098 1 1092 0.0 2220
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0790580 AT5G49810.1 71.350 1089 286 7 7 1095 6 1068 0.0 1605

Find 272 sgRNAs with CRISPR-Local

Find 782 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAATTATGATCTTTAATA+TGG 0.140051 5_3:-1427547 Msa0790580:CDS
GAATTCTTTATGGGGCTTTC+TGG 0.151633 5_3:-1427300 Msa0790580:CDS
CTCAATGGTGTTCTCAGATT+TGG 0.158728 5_3:-1420270 Msa0790580:CDS
AACCCATGGGTGTATATTTC+TGG 0.185448 5_3:-1420525 Msa0790580:CDS
TATAGTATAGTAAAGTAAAA+TGG 0.195073 5_3:-1429639 Msa0790580:exon
TCGTATTGAAGACATCTTAT+TGG 0.201428 5_3:-1429417 Msa0790580:CDS
TTTAAGGAATAAGGAAAGTT+TGG 0.213704 5_3:-1419541 Msa0790580:three_prime_UTR
AACAATTCTGTCCTTGAAAA+TGG 0.237075 5_3:+1429204 None:intergenic
TCATTCATGGTGTGAGGTTT+AGG 0.247285 5_3:-1419375 Msa0790580:three_prime_UTR
GGAGTCCTGAAGTATCTTTC+AGG 0.257655 5_3:-1424065 Msa0790580:CDS
AGGCTGGGGTGGCTGGGATT+TGG 0.274445 5_3:-1420373 Msa0790580:CDS
AAATCATTTCTTCAGGTCTA+TGG 0.277256 5_3:-1429050 Msa0790580:intron
GCACGGACAGCTTGGGCTTA+TGG 0.281230 5_3:-1427261 Msa0790580:CDS
TTCTAGTAACTCAACAGTTT+TGG 0.282056 5_3:+1423814 None:intergenic
TTAGTCATTGCATCTGGATT+TGG 0.284974 5_3:+1427992 None:intergenic
ATCTGATATACAAGTATTCT+TGG 0.287489 5_3:-1419595 Msa0790580:three_prime_UTR
CGCTTCCGCAATCTCATTGC+TGG 0.289657 5_3:-1426908 Msa0790580:CDS
CTGGGGTGGCTGGGATTTGG+AGG 0.291490 5_3:-1420370 Msa0790580:CDS
TTTGAGCTATCCAGCCTTCC+AGG 0.295362 5_3:-1424095 Msa0790580:CDS
ACAGTAAAGGCTGGGGTGGC+TGG 0.304121 5_3:-1420380 Msa0790580:CDS
CAGGCAGTGGTTAACATCTT+TGG 0.305985 5_3:-1425172 Msa0790580:CDS
TCAATGGTGTTCTCAGATTT+GGG 0.308130 5_3:-1420269 Msa0790580:CDS
CATCTAAAGCATTCAAGTAT+AGG 0.308855 5_3:+1428985 None:intergenic
AGATGTCTTCAATACGAAAA+TGG 0.316126 5_3:+1429423 None:intergenic
AAAGTGAAGGACCAGTCTTC+AGG 0.316653 5_3:+1429256 None:intergenic
TTAATCAGTCAGTACTATTA+TGG 0.318078 5_3:-1423779 Msa0790580:CDS
ATGTTTCTGTAATTCATTCA+TGG 0.320383 5_3:-1419388 Msa0790580:three_prime_UTR
CGGTGGTTCATATGGAAAAT+AGG 0.325716 5_3:+1426943 None:intergenic
TTGGCAAACTAAAATCATTC+AGG 0.327982 5_3:-1427457 Msa0790580:CDS
GAGTAATTATTGTGCACTTC+AGG 0.330199 5_3:-1427927 Msa0790580:intron
GGCTCTTGGACTGGAATTCC+TGG 0.330547 5_3:-1419719 Msa0790580:CDS
CAAAAGATTGTTTGAGCGTC+GGG 0.343813 5_3:-1427499 Msa0790580:CDS
CTAGAGCTGTCAAAATTTCC+TGG 0.344264 5_3:-1429013 Msa0790580:CDS
TGATACTTCATCCTCTGGTT+TGG 0.344328 5_3:-1420409 Msa0790580:CDS
ACAAAAGCTACTTCTAAATC+TGG 0.347500 5_3:+1423872 None:intergenic
GTTTATAGCAACAAGGAGAT+AGG 0.349832 5_3:-1420477 Msa0790580:CDS
TTTCTTCTCCTCGTCATAGA+TGG 0.350985 5_3:+1428950 None:intergenic
AATTCCATTATCTCTGCAAT+AGG 0.353870 5_3:+1428884 None:intergenic
GACAGAATTGTTTCTGAGTT+AGG 0.356791 5_3:-1429193 Msa0790580:CDS
CTTCCAGCCGGTGGTTCATA+TGG 0.357915 5_3:+1426935 None:intergenic
GTGGAGGACCAGTTTGGGTT+AGG 0.358252 5_3:-1427618 Msa0790580:CDS
CAATTAAACCTAACCCAAAC+TGG 0.361276 5_3:+1427610 None:intergenic
AGCTCGACGACTCAAATATT+AGG 0.363902 5_3:-1419781 Msa0790580:CDS
TATTCTTAACCAGTTGGGTT+TGG 0.365012 5_3:-1420241 Msa0790580:CDS
CTATCCTATTGCAGAGATAA+TGG 0.366988 5_3:-1428888 Msa0790580:CDS
GATCAACATCCATGTGGATC+AGG 0.374782 5_3:+1420916 None:intergenic
CAAGCTGTCCGTGCACAAAT+AGG 0.378108 5_3:+1427270 None:intergenic
ATTCAACTTGAAAGAATTGT+AGG 0.380322 5_3:-1428864 Msa0790580:CDS
TTAAGGAATAAGGAAAGTTT+GGG 0.380717 5_3:-1419540 Msa0790580:three_prime_UTR
TTGAGTACCTGTGCTAGATT+TGG 0.380846 5_3:-1420447 Msa0790580:CDS
TTTCTTATTCTTAACCAGTT+GGG 0.384297 5_3:-1420246 Msa0790580:CDS
GTTCTTCTCAATTTCAACTA+AGG 0.386993 5_3:+1427338 None:intergenic
TGCCGCACTCAGATCATTGC+TGG 0.387328 5_3:-1429552 Msa0790580:CDS
GGTGAACAACCGACCTGGTT+AGG 0.393025 5_3:+1427180 None:intergenic
ATCATCTTAGTCATTGCATC+TGG 0.395798 5_3:+1427986 None:intergenic
TCAAGAGATCAGCAGTTCTC+TGG 0.403974 5_3:-1427047 Msa0790580:CDS
GCAATTGACGGGGTAGATAA+TGG 0.404074 5_3:-1420942 Msa0790580:CDS
TTCTTTGACAAAACAGGAGT+TGG 0.405274 5_3:+1429812 None:intergenic
GCCTGTTCCATCTCCTGTCA+AGG 0.406059 5_3:-1420883 Msa0790580:CDS
CTGCAGAAGTGCTCGCAATC+TGG 0.407281 5_3:-1429587 Msa0790580:CDS
CACTGGCAGTGAGTGGAATA+TGG 0.407811 5_3:+1426867 None:intergenic
TTTCCACAGTGGCATTTCCT+TGG 0.411782 5_3:+1419807 None:intergenic
ATAGTATAGTAAAGTAAAAT+GGG 0.413630 5_3:-1429638 Msa0790580:exon
GCTGGAGGGTCTTGAGGATC+TGG 0.414778 5_3:-1429534 Msa0790580:CDS
TTAAAGATCATAATTCCATT+TGG 0.417333 5_3:+1427552 None:intergenic
CTGTCCTTGAAAATGGAGTC+AGG 0.426113 5_3:+1429211 None:intergenic
TCAATAGCCGCATTCCTTGA+AGG 0.426604 5_3:+1425261 None:intergenic
ATAATTGATACTTCATCCTC+TGG 0.436360 5_3:-1420414 Msa0790580:CDS
AGAAGAAAACTTTGTTGGAC+AGG 0.436905 5_3:-1428935 Msa0790580:CDS
GTTTCTTATTCTTAACCAGT+TGG 0.437260 5_3:-1420247 Msa0790580:CDS
CGAGGAGAAGAAAACTTTGT+TGG 0.439885 5_3:-1428940 Msa0790580:CDS
CAGTAAAGGCTGGGGTGGCT+GGG 0.442647 5_3:-1420379 Msa0790580:CDS
TTTGAGATAGGCGGAAGGTT+TGG 0.443435 5_3:+1419871 None:intergenic
CTCAGAAGGTGCACGCCGGC+AGG 0.443463 5_3:+1423721 None:intergenic
TTTATAGCAACAAGGAGATA+GGG 0.443658 5_3:-1420476 Msa0790580:CDS
CAGCTCTAGGATTGATATCA+AGG 0.449801 5_3:+1429027 None:intergenic
ATATGCTGCAAAGAAGTTGC+TGG 0.450060 5_3:-1420166 Msa0790580:CDS
TCTGAGTTAGGTTGTGGAAA+TGG 0.450674 5_3:-1429181 Msa0790580:CDS
ATTCTGTTCTTTGACAAAAC+AGG 0.450743 5_3:+1429806 None:intergenic
GCTTGGGCTTATGGAAAGTC+TGG 0.451869 5_3:-1427252 Msa0790580:CDS
TCCATTTGATCCTGGAAGGC+TGG 0.457000 5_3:+1424085 None:intergenic
AAGTGAAGGACCAGTCTTCA+GGG 0.457383 5_3:+1429257 None:intergenic
TTGAATGCTTTAGATGAAAA+CGG 0.458305 5_3:-1428978 Msa0790580:CDS
GCAAATAATTGCCGCATGAG+AGG 0.459019 5_3:+1424031 None:intergenic
GTCAAATCAGTTGATATGAT+AGG 0.459254 5_3:-1421008 Msa0790580:CDS
TCCAGCCTTCCAGGATCAAA+TGG 0.460211 5_3:-1424086 Msa0790580:CDS
AAGCCAGTGGGGTTGATTGT+AGG 0.461231 5_3:+1420501 None:intergenic
CTCTTCGCTTGTTCTCACCT+CGG 0.461891 5_3:-1425233 Msa0790580:CDS
CTATTTGTGCACGGACAGCT+TGG 0.467046 5_3:-1427269 Msa0790580:CDS
TGGAATTTGACAGTAAAGGC+TGG 0.467692 5_3:-1420389 Msa0790580:CDS
TTCAGGACTCCATTTGATCC+TGG 0.469284 5_3:+1424077 None:intergenic
GGAATTATGATCTTTAATAT+GGG 0.472141 5_3:-1427546 Msa0790580:CDS
TATGCATCAATAGTGGCTCT+TGG 0.472699 5_3:-1419733 Msa0790580:CDS
GACTTCCTGAAAGATACTTC+AGG 0.473070 5_3:+1424060 None:intergenic
ATGTGTCAACCAAACCCAAC+TGG 0.473413 5_3:+1420232 None:intergenic
TTCTTCTCCTCGTCATAGAT+GGG 0.473757 5_3:+1428951 None:intergenic
CTGGAATTCCTGGATATTGT+CGG 0.474289 5_3:-1419709 Msa0790580:CDS
GAAGATCCGAGCCTGGGAAC+GGG 0.476818 5_3:+1429508 None:intergenic
TAGAAATAAATTGACTATGA+TGG 0.478039 5_3:-1429299 Msa0790580:CDS
TATTTGTGCACGGACAGCTT+GGG 0.478209 5_3:-1427268 Msa0790580:CDS
TAGTTCCCATTTGATCCAGC+TGG 0.478269 5_3:+1420660 None:intergenic
GCATTGATCGCAGGAGTCCT+TGG 0.478388 5_3:+1429457 None:intergenic
AATACACTCACTGGAGTCCT+TGG 0.479553 5_3:-1420558 Msa0790580:CDS
ATCAATAGTGGCTCTTGGAC+TGG 0.479773 5_3:-1419728 Msa0790580:CDS
TTTAATATGGGAGGTCGCCC+AGG 0.479783 5_3:-1427534 Msa0790580:CDS
TAAACCTGTGGCTTCGAGAA+TGG 0.481541 5_3:+1419754 None:intergenic
AAAACTGTTGAGTTACTAGA+AGG 0.481631 5_3:-1423812 Msa0790580:CDS
AAGCTGAAGATTTCATCAAA+AGG 0.482667 5_3:-1419839 Msa0790580:CDS
ATTGCAAGGGCAGTAGAAGA+AGG 0.482982 5_3:-1427591 Msa0790580:CDS
TAGTCAATTTATTTCTACCT+TGG 0.484836 5_3:+1429305 None:intergenic
TCTCATGCGGCAATTATTTG+CGG 0.485639 5_3:-1424029 Msa0790580:CDS
AATTACCTCCTTCAAGCACT+TGG 0.486469 5_3:+1420071 None:intergenic
AAGCCTCAAGTGGTGGTGAC+TGG 0.488007 5_3:-1424218 Msa0790580:CDS
TCATTCTCTGTGTCTCTGCT+CGG 0.490012 5_3:-1420312 Msa0790580:CDS
CTGCCGGCGTGCACCTTCTG+AGG 0.491392 5_3:-1423720 Msa0790580:intron
ATTCAAGTATAGGTTTATCC+AGG 0.491476 5_3:+1428995 None:intergenic
AAGTAGATCCAAGTGCTTGA+AGG 0.493652 5_3:-1420079 Msa0790580:CDS
CAATGATCTGAGTGCGGCAT+AGG 0.494621 5_3:+1429556 None:intergenic
ATTGTTTCTGAGTTAGGTTG+TGG 0.497181 5_3:-1429187 Msa0790580:CDS
CAAAGATGTTAACCACTGCC+TGG 0.497338 5_3:+1425173 None:intergenic
AACTGTAAACTGATAAAGCA+TGG 0.500551 5_3:+1427217 None:intergenic
TGTAGCTTATTGAGATGTAC+TGG 0.505127 5_3:-1427388 Msa0790580:intron
GTTGCTGGAGCTTAGAGAGC+AGG 0.505418 5_3:-1420151 Msa0790580:CDS
TTGGGTTAGGTTTAATTGCA+AGG 0.509830 5_3:-1427605 Msa0790580:CDS
TTCACGGAAAATACACTCAC+TGG 0.510441 5_3:-1420567 Msa0790580:CDS
ATCATTGCTGGAGGGTCTTG+AGG 0.511231 5_3:-1429540 Msa0790580:CDS
ATGCTGAGCTAGCAATTGAC+GGG 0.511938 5_3:-1420953 Msa0790580:CDS
CAGATTGCGAGCACTTCTGC+AGG 0.512285 5_3:+1429588 None:intergenic
TTTCCATATGAACCACCGGC+TGG 0.513254 5_3:-1426938 Msa0790580:CDS
CCTGTCCTACAGATAGTACT+AGG 0.513653 5_3:+1419332 None:intergenic
GTTAACATCTTTGGCACTTG+AGG 0.514577 5_3:-1425163 Msa0790580:intron
GAGAAAGGAAGATCCGAGCC+TGG 0.515009 5_3:+1429501 None:intergenic
AAATGATTTCAAGAAAGCAC+TGG 0.515506 5_3:-1419666 Msa0790580:CDS
TTATTGAGATGTACTGGTAC+AGG 0.517336 5_3:-1427382 Msa0790580:intron
TGCGGCAATTATTTGCGGAC+TGG 0.519683 5_3:-1424024 Msa0790580:CDS
ATATCAGTAATCAAACCAAA+TGG 0.520763 5_3:-1427567 Msa0790580:CDS
TTAGATACAACGCGAGATGT+TGG 0.521057 5_3:-1424149 Msa0790580:CDS
TATAGTAAAGTAAAATGGGT+TGG 0.523774 5_3:-1429634 Msa0790580:exon
GCATATTTAACAGTACTATG+AGG 0.525047 5_3:+1420183 None:intergenic
AATAATTACTCAGAGAATGA+AGG 0.526386 5_3:+1427939 None:intergenic
TTGCTATAAACTAAGCCAGT+GGG 0.530370 5_3:+1420489 None:intergenic
CGGAAGCGTTTGCTTCCAGC+CGG 0.530945 5_3:+1426923 None:intergenic
ATAGCAGCCTTGACAGGAGA+TGG 0.530957 5_3:+1420876 None:intergenic
GGAATTTGACAGTAAAGGCT+GGG 0.532374 5_3:-1420388 Msa0790580:CDS
TGGAAACCCGTTCCCAGGCT+CGG 0.533105 5_3:-1429514 Msa0790580:CDS
TGTAATTCATTCATGGTGTG+AGG 0.533267 5_3:-1419381 Msa0790580:three_prime_UTR
ACAGGTTTATGCATCAATAG+TGG 0.535129 5_3:-1419740 Msa0790580:CDS
CCTAGTACTATCTGTAGGAC+AGG 0.535202 5_3:-1419332 Msa0790580:three_prime_UTR
TGAGAAGTGGCTACCTTCCA+AGG 0.536986 5_3:-1429137 Msa0790580:intron
GGCACTTGAGAAGAGCGGTT+GGG 0.537763 5_3:-1419930 Msa0790580:CDS
CTATGAGGTTTACTTAATCC+CGG 0.538972 5_3:+1420198 None:intergenic
AAACAAACAAACACCTTGGA+AGG 0.542682 5_3:+1429124 None:intergenic
GCCTTGACAGGAGATGGAAC+AGG 0.543848 5_3:+1420882 None:intergenic
AGCATTATTAAGAACTGATA+CGG 0.544388 5_3:+1420971 None:intergenic
CAAATAATTGCCGCATGAGA+GGG 0.544722 5_3:+1424032 None:intergenic
AATGCCATTCTCGAAGCCAC+AGG 0.545511 5_3:-1419758 Msa0790580:CDS
AATGCTGAGCTAGCAATTGA+CGG 0.547345 5_3:-1420954 Msa0790580:CDS
AGGTAGCCACTTCTCAGCTA+TGG 0.550757 5_3:+1429144 None:intergenic
TCAACTTCGTCAACCTAACC+AGG 0.551117 5_3:-1427193 Msa0790580:intron
AACGCTTCTGAAGGAGAGAA+AGG 0.551591 5_3:+1429486 None:intergenic
GCAAAAGATTGTTTGAGCGT+CGG 0.551831 5_3:-1427500 Msa0790580:CDS
CATCTCGCGTTGTATCTAAG+AGG 0.552186 5_3:+1424153 None:intergenic
GGTTTGGAATTTGACAGTAA+AGG 0.552346 5_3:-1420393 Msa0790580:CDS
GGAAGATCCGAGCCTGGGAA+CGG 0.552921 5_3:+1429507 None:intergenic
GGATCTGGAAACCCGTTCCC+AGG 0.553049 5_3:-1429519 Msa0790580:CDS
AAGCGTTTGCTTCCAGCCGG+TGG 0.555449 5_3:+1426926 None:intergenic
AACTCCGTGCTGGTATCCGT+TGG 0.556241 5_3:+1420762 None:intergenic
ATCTGACTCGACACCTACCC+AGG 0.556374 5_3:-1425191 Msa0790580:CDS
GGACTCCATTTGATCCTGGA+AGG 0.557054 5_3:+1424081 None:intergenic
AGAATATATAAACTCCGTGC+TGG 0.558315 5_3:+1420752 None:intergenic
AATTGTAGGATGTATTCCTC+AGG 0.559745 5_3:-1428850 Msa0790580:intron
CTTCTTACACTGGCAGTGAG+TGG 0.561486 5_3:+1426860 None:intergenic
GTCCTCTGTTGCATTAAAGA+AGG 0.563325 5_3:-1420699 Msa0790580:CDS
ATATTGAACCGACAATATCC+AGG 0.564555 5_3:+1419701 None:intergenic
TGATCGCAGGAGTCCTTGGT+GGG 0.564720 5_3:+1429461 None:intergenic
AAATTCGTCAAAAGCAACTA+CGG 0.564851 5_3:-1420789 Msa0790580:CDS
CTCGACACCTACCCAGGCAG+TGG 0.568947 5_3:-1425185 Msa0790580:CDS
TGGTGGGGAAACGCTTCTGA+AGG 0.571049 5_3:+1429477 None:intergenic
ATCAACATCCATGTGGATCA+GGG 0.572758 5_3:+1420917 None:intergenic
AGCAGAGGATTCCGCAGCAG+TGG 0.573286 5_3:-1429837 None:intergenic
AGAAAGGAAGATCCGAGCCT+GGG 0.574903 5_3:+1429502 None:intergenic
TGGGTTAGGTTTAATTGCAA+GGG 0.575481 5_3:-1427604 Msa0790580:CDS
ACAGGCAGACAGACCTCAGA+AGG 0.575730 5_3:+1423707 None:intergenic
GTGTGCTGGCATTTCTGTTG+TGG 0.575742 5_3:-1419894 Msa0790580:CDS
CCACTTCTCAGCTATGGCAA+TGG 0.578082 5_3:+1429150 None:intergenic
ATGGGAGGTCGCCCAGGACA+AGG 0.579169 5_3:-1427528 Msa0790580:CDS
GATAACAGAAAATGCTAGTG+AGG 0.579465 5_3:-1427966 Msa0790580:CDS
TTGATCGCAGGAGTCCTTGG+TGG 0.582289 5_3:+1429460 None:intergenic
TTATAGCAACAAGGAGATAG+GGG 0.583110 5_3:-1420475 Msa0790580:CDS
AAAGATGTTAACCACTGCCT+GGG 0.584046 5_3:+1425174 None:intergenic
GACGTGCTTGAATCGTGTGC+TGG 0.584851 5_3:-1419908 Msa0790580:CDS
ATCATTAAGTCTGATTGCCG+AGG 0.586026 5_3:+1424260 None:intergenic
AGCAGAGACACAGAGAATGA+TGG 0.587311 5_3:+1420315 None:intergenic
TCATTAAGTCTGATTGCCGA+GGG 0.588075 5_3:+1424261 None:intergenic
GGGTTGGACGACGCCGACAG+TGG 0.588234 5_3:-1429618 Msa0790580:CDS
CTCTGTTGCATTAAAGAAGG+TGG 0.588460 5_3:-1420696 Msa0790580:CDS
GAAGAAAACTTTGTTGGACA+GGG 0.588600 5_3:-1428934 Msa0790580:CDS
TTGTCTCTTAAGATGCTCAA+TGG 0.588851 5_3:-1420285 Msa0790580:CDS
ATTCCAGTCACCACCACTTG+AGG 0.592207 5_3:+1424215 None:intergenic
ACTTTACTATACTATACTTG+CGG 0.592982 5_3:+1429646 None:intergenic
AGGCACTTGAGAAGAGCGGT+TGG 0.593966 5_3:-1419931 Msa0790580:CDS
AAAATCCAGCAATGAGATTG+CGG 0.595435 5_3:+1426903 None:intergenic
CGCACTCAGATCATTGCTGG+AGG 0.597096 5_3:-1429549 Msa0790580:CDS
ATGTTAACCACTGCCTGGGT+AGG 0.597288 5_3:+1425178 None:intergenic
GAAATTGAAGCCTCAAGTGG+TGG 0.597406 5_3:-1424225 Msa0790580:CDS
CCATTGCCATAGCTGAGAAG+TGG 0.597669 5_3:-1429150 Msa0790580:CDS
GGTCCAGAAATATACACCCA+TGG 0.599561 5_3:+1420522 None:intergenic
AGTTAGGTTGTGGAAATGGA+TGG 0.599610 5_3:-1429177 Msa0790580:CDS
ATTATGATCTTTAATATGGG+AGG 0.600959 5_3:-1427543 Msa0790580:CDS
TACTTGTATATCAGATGACA+CGG 0.601649 5_3:+1419602 None:intergenic
AAACCTACGCTGGCATCAGT+AGG 0.603160 5_3:+1420594 None:intergenic
TTGCAAGGGCAGTAGAAGAA+GGG 0.604616 5_3:-1427590 Msa0790580:CDS
TAAAGAATTCAAAACGGTGT+GGG 0.605491 5_3:+1427313 None:intergenic
TTGCGGACTGGTAAAGAACA+AGG 0.605806 5_3:-1424012 Msa0790580:intron
CTTGCAAGATAAGCAAGGAA+AGG 0.606401 5_3:+1426983 None:intergenic
GCCCCATAAAGAATTCAAAA+CGG 0.606579 5_3:+1427307 None:intergenic
GAATGCTTGCAAGATAAGCA+AGG 0.606590 5_3:+1426978 None:intergenic
AAATTTAGAGAAGTTGCACT+AGG 0.607142 5_3:-1419632 Msa0790580:CDS
TTTGACAGTAAAGGCTGGGG+TGG 0.608295 5_3:-1420384 Msa0790580:CDS
AGTCTGAAAGCATTGATCGC+AGG 0.608787 5_3:+1429448 None:intergenic
CGTGAACTTAAAACCTACGC+TGG 0.609226 5_3:+1420584 None:intergenic
GCTGAAAAGCAAGAAGCTCG+TGG 0.609859 5_3:+1423747 None:intergenic
ACTGTAAACTGATAAAGCAT+GGG 0.610293 5_3:+1427218 None:intergenic
GAATTTGACAGTAAAGGCTG+GGG 0.612268 5_3:-1420387 Msa0790580:CDS
GGACCTACAATCAACCCCAC+TGG 0.614959 5_3:-1420504 Msa0790580:CDS
TAACAGTAATTGAAGCCCCT+CGG 0.615124 5_3:-1424277 Msa0790580:CDS
GTTCCTACTGATGCCAGCGT+AGG 0.617598 5_3:-1420597 Msa0790580:CDS
GTCCAGAAATATACACCCAT+GGG 0.618133 5_3:+1420523 None:intergenic
CGATAGACCGTGTTAACAAG+AGG 0.619023 5_3:+1419508 None:intergenic
TTCTCTGTGTCTCTGCTCGG+AGG 0.619743 5_3:-1420309 Msa0790580:CDS
TGTCCTTGAAAATGGAGTCA+GGG 0.621206 5_3:+1429212 None:intergenic
TGCAGGAACTCATCCACTGT+CGG 0.624029 5_3:+1429605 None:intergenic
TAATGGTTCCCTGATCCACA+TGG 0.624580 5_3:-1420925 Msa0790580:CDS
TCTTGCACCAAATCTAGCAC+AGG 0.626422 5_3:+1420440 None:intergenic
ACTGTCAAATTCCAAACCAG+AGG 0.626740 5_3:+1420398 None:intergenic
CATTGCATTGCAGGGCACCA+AGG 0.627918 5_3:-1429322 Msa0790580:intron
GCACTCAGATCATTGCTGGA+GGG 0.628809 5_3:-1429548 Msa0790580:CDS
AAAGAAATTGAAGCCTCAAG+TGG 0.632976 5_3:-1424228 Msa0790580:CDS
TGATCCAGCTGGAAAACAGA+GGG 0.633568 5_3:+1420671 None:intergenic
CCCTAGGCACTTGAGAAGAG+CGG 0.634628 5_3:-1419935 Msa0790580:intron
TCAAAAGGTGAAGTCAGCCA+AGG 0.636378 5_3:-1419824 Msa0790580:CDS
CATCTTATTGGATCAATACG+AGG 0.636572 5_3:-1429405 Msa0790580:CDS
CACCTTCTTTAATGCAACAG+AGG 0.637639 5_3:+1420697 None:intergenic
TCAGAAGCGTTTCCCCACCA+AGG 0.639066 5_3:-1429474 Msa0790580:CDS
TAGATCCAAGTGCTTGAAGG+AGG 0.641421 5_3:-1420076 Msa0790580:intron
GAGATCAGCCTATTTGTGCA+CGG 0.644359 5_3:-1427278 Msa0790580:CDS
ATTGCCGCATGAGAGGGTAG+AGG 0.648136 5_3:+1424038 None:intergenic
TGGGCTTATGGAAAGTCTGG+TGG 0.653253 5_3:-1427249 Msa0790580:CDS
ATAAAGAATTCAAAACGGTG+TGG 0.653725 5_3:+1427312 None:intergenic
TGGCTTAGTTTATAGCAACA+AGG 0.656503 5_3:-1420484 Msa0790580:CDS
ACTATTGATGCATAAACCTG+TGG 0.658473 5_3:+1419742 None:intergenic
TCATCAACAATTGCAAGCCG+AGG 0.658683 5_3:+1425216 None:intergenic
AAAAGATTGTTTGAGCGTCG+GGG 0.659524 5_3:-1427498 Msa0790580:CDS
CTCCAGCAATGATCTGAGTG+CGG 0.670267 5_3:+1429550 None:intergenic
AGGAGTTGGATCCACTGCTG+CGG 0.672887 5_3:+1429826 None:intergenic
GATCGCAGGAGTCCTTGGTG+GGG 0.673573 5_3:+1429462 None:intergenic
TTGATCCAGCTGGAAAACAG+AGG 0.673922 5_3:+1420670 None:intergenic
ATCTTATTGGATCAATACGA+GGG 0.675831 5_3:-1429404 Msa0790580:intron
AGACCTCAGAAGGTGCACGC+CGG 0.675996 5_3:+1423717 None:intergenic
AACAACCTAGTACTATCTGT+AGG 0.679974 5_3:-1419337 Msa0790580:three_prime_UTR
GTCGAGCTTTATTTCCACAG+TGG 0.682324 5_3:+1419796 None:intergenic
AAGTCCTCTACCCTCTCATG+CGG 0.683146 5_3:-1424042 Msa0790580:CDS
CGGACAACCCATCTATGACG+AGG 0.684087 5_3:-1428958 Msa0790580:CDS
GTTGCTATAAACTAAGCCAG+TGG 0.684096 5_3:+1420488 None:intergenic
TGCTATAAACTAAGCCAGTG+GGG 0.689156 5_3:+1420490 None:intergenic
CATTAAGTCTGATTGCCGAG+GGG 0.691664 5_3:+1424262 None:intergenic
CAGCCAAGGAAATGCCACTG+TGG 0.695145 5_3:-1419810 Msa0790580:CDS
ACTTGTATATCAGATGACAC+GGG 0.696772 5_3:+1419603 None:intergenic
AGATTTGATCAACATCCATG+TGG 0.705221 5_3:+1420910 None:intergenic
TGAGATGTACTGGTACAGGC+TGG 0.710025 5_3:-1427378 Msa0790580:intron
TGCTGAGCTAGCAATTGACG+GGG 0.716580 5_3:-1420952 Msa0790580:CDS
ATAGTACTGACTGATTAATG+CGG 0.723581 5_3:+1423784 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTTTAATTTTATATT+TGG + chr5_3:1424305-1424324 None:intergenic 0.0%
!!! CAATTTTTTATTAAAACAAA+TGG - chr5_3:1420862-1420881 Msa0790580:CDS 10.0%
!!! CTTCAATTAAAATTTATTTT+TGG + chr5_3:1421293-1421312 None:intergenic 10.0%
!!! TACTTTTGTTTTTTAAATTA+CGG + chr5_3:1422942-1422961 None:intergenic 10.0%
!!! AATTAATAAATTTAAGATTC+AGG + chr5_3:1423080-1423099 None:intergenic 10.0%
!!! TTTTTTATATTATTTGTTTG+TGG + chr5_3:1423378-1423397 None:intergenic 10.0%
!! ATATTAGTAATAATATTCTA+CGG + chr5_3:1423615-1423634 None:intergenic 10.0%
!! TATAGTATAGTAAAGTAAAA+TGG - chr5_3:1419442-1419461 Msa0790580:three_prime_UTR 15.0%
!! ATAGTATAGTAAAGTAAAAT+GGG - chr5_3:1419443-1419462 Msa0790580:three_prime_UTR 15.0%
!! TTAATTGAGTTAAAAGAATA+AGG - chr5_3:1420403-1420422 Msa0790580:CDS 15.0%
!! TAATTGAGTTAAAAGAATAA+GGG - chr5_3:1420404-1420423 Msa0790580:CDS 15.0%
!!! GACATAAAAAATTATTTTCA+TGG + chr5_3:1420723-1420742 None:intergenic 15.0%
!!! TACTTTTCGTTTTTAAATTA+TGG - chr5_3:1422813-1422832 Msa0790580:intron 15.0%
!!! ACTTTTTAAAAAACATTTCA+TGG + chr5_3:1422842-1422861 None:intergenic 15.0%
!! GACATTATATAATTATTAGT+AGG + chr5_3:1424032-1424051 None:intergenic 15.0%
!!! AAAATGATAAAAACTTGTTA+TGG + chr5_3:1424745-1424764 None:intergenic 15.0%
!!! ATTAAAATTACATTTTTGCA+TGG + chr5_3:1426108-1426127 None:intergenic 15.0%
!!! TATTTTTGAGCAATTTTATA+GGG + chr5_3:1426874-1426893 None:intergenic 15.0%
!!! ATATTTTTGAGCAATTTTAT+AGG + chr5_3:1426875-1426894 None:intergenic 15.0%
!!! TTCTCTTTATTTGTATATAA+AGG - chr5_3:1427674-1427693 Msa0790580:intron 15.0%
!!! TCTCTTTATTTGTATATAAA+GGG - chr5_3:1427675-1427694 Msa0790580:intron 15.0%
!!! TTTAATTGCTTTGTTTTTTA+TGG - chr5_3:1429067-1429086 Msa0790580:intron 15.0%
!! TAGAAATAAATTGACTATGA+TGG - chr5_3:1419782-1419801 Msa0790580:CDS 20.0%
!! TTTGTATTAGCATAGAAATT+GGG + chr5_3:1420014-1420033 None:intergenic 20.0%
!! ATTTGTATTAGCATAGAAAT+TGG + chr5_3:1420015-1420034 None:intergenic 20.0%
!!! ACTTCAAACATATTTTAATG+TGG + chr5_3:1420598-1420617 None:intergenic 20.0%
!! TTTCTACAAAATTACAATGA+AGG + chr5_3:1420745-1420764 None:intergenic 20.0%
!! TAAAACTGAAAATGATTGTA+TGG + chr5_3:1420911-1420930 None:intergenic 20.0%
!! CAACAAAAAAAGTCATAAAT+AGG + chr5_3:1421369-1421388 None:intergenic 20.0%
!! GTAGTATTTATGTCATAAAT+AGG + chr5_3:1421402-1421421 None:intergenic 20.0%
!! TTAAAGATCATAATTCCATT+TGG + chr5_3:1421532-1421551 None:intergenic 20.0%
!! TGGAATTATGATCTTTAATA+TGG - chr5_3:1421534-1421553 Msa0790580:intron 20.0%
!! GGAATTATGATCTTTAATAT+GGG - chr5_3:1421535-1421554 Msa0790580:intron 20.0%
!!! ATATTTGAGTTTCTGAAAAA+TGG - chr5_3:1422008-1422027 Msa0790580:intron 20.0%
!! AAATATCTTCTGTAGTTAAT+AGG - chr5_3:1422363-1422382 Msa0790580:intron 20.0%
!!! ATCTGTTATTTATTGAATTC+TGG - chr5_3:1422565-1422584 Msa0790580:intron 20.0%
!! TTATTCTAACTTACTTTCTT+TGG - chr5_3:1422664-1422683 Msa0790580:intron 20.0%
!! ACAAAATCTAAGAGAAATAA+GGG - chr5_3:1423302-1423321 Msa0790580:intron 20.0%
!!! AAAAATGGTCTTATTTCAAT+TGG - chr5_3:1423421-1423440 Msa0790580:intron 20.0%
!!! TCTATTTTGAGTTAATAATC+TGG - chr5_3:1423533-1423552 Msa0790580:intron 20.0%
!!! CTATTTTGAGTTAATAATCT+GGG - chr5_3:1423534-1423553 Msa0790580:intron 20.0%
!! TATTATTATATAACTGCTGT+AGG + chr5_3:1423996-1424015 None:intergenic 20.0%
!!! TATATATGCTTTTGAAACAT+TGG + chr5_3:1424196-1424215 None:intergenic 20.0%
!! TTTAAGCAATCTTAAAGATT+CGG - chr5_3:1424328-1424347 Msa0790580:intron 20.0%
!! TATATTTACTTAGTTGCAAT+TGG - chr5_3:1424515-1424534 Msa0790580:intron 20.0%
!! AATTACAAAGAAAAGGATAA+AGG + chr5_3:1424595-1424614 None:intergenic 20.0%
!! ATTCGTAAATTACAAAGAAA+AGG + chr5_3:1424602-1424621 None:intergenic 20.0%
!!! TTTATCATTTTAGCAGAATA+TGG - chr5_3:1424754-1424773 Msa0790580:intron 20.0%
!!! TTATCATTTTAGCAGAATAT+GGG - chr5_3:1424755-1424774 Msa0790580:intron 20.0%
!! TTTGATCAATTTCGTATTAA+TGG - chr5_3:1425156-1425175 Msa0790580:intron 20.0%
!!! AAGGATTATGCAAATATTTT+TGG + chr5_3:1426245-1426264 None:intergenic 20.0%
!! AGGGAAATTAAAATCTAATT+TGG + chr5_3:1426855-1426874 None:intergenic 20.0%
!!! GTTAGTTTTAATGAAAAACA+GGG + chr5_3:1426915-1426934 None:intergenic 20.0%
!!! TGTTAGTTTTAATGAAAAAC+AGG + chr5_3:1426916-1426935 None:intergenic 20.0%
!! AACAATATTTAGACTTAAAG+TGG - chr5_3:1426964-1426983 Msa0790580:CDS 20.0%
!! ACTATGTAAACTAGATAATT+TGG - chr5_3:1427100-1427119 Msa0790580:intron 20.0%
!! CTGATATAGATTAAATTGAA+GGG - chr5_3:1427346-1427365 Msa0790580:CDS 20.0%
!!! GAGTTTTTTAAGTAATTAGT+AGG - chr5_3:1427563-1427582 Msa0790580:CDS 20.0%
!!! TTTTTTAAGTAATTAGTAGG+TGG - chr5_3:1427566-1427585 Msa0790580:CDS 20.0%
!!! CTCTTTATTTGTATATAAAG+GGG - chr5_3:1427676-1427695 Msa0790580:intron 20.0%
!! ATTATTGTTAATTCGATTGT+AGG - chr5_3:1427854-1427873 Msa0790580:intron 20.0%
!!! GTGTTAATTTTTAGTTTACA+TGG + chr5_3:1427939-1427958 None:intergenic 20.0%
!!! AAAGAATGCTAAACAATTTT+TGG - chr5_3:1429113-1429132 Msa0790580:intron 20.0%
!!! AAGAATGCTAAACAATTTTT+GGG - chr5_3:1429114-1429133 Msa0790580:intron 20.0%
! ACTTTACTATACTATACTTG+CGG + chr5_3:1419438-1419457 None:intergenic 25.0%
! TATAGTAAAGTAAAATGGGT+TGG - chr5_3:1419447-1419466 Msa0790580:three_prime_UTR 25.0%
! GATTCATTCATCTTTCTTAT+TGG - chr5_3:1419722-1419741 Msa0790580:CDS 25.0%
!!! TAGTCAATTTATTTCTACCT+TGG + chr5_3:1419779-1419798 None:intergenic 25.0%
! CTAATACAAATCATTTCTTC+AGG - chr5_3:1420024-1420043 Msa0790580:intron 25.0%
!! TTGAATGCTTTAGATGAAAA+CGG - chr5_3:1420103-1420122 Msa0790580:CDS 25.0%
! ATTCAACTTGAAAGAATTGT+AGG - chr5_3:1420217-1420236 Msa0790580:CDS 25.0%
! CTCAATTAAATTTCAGTACA+AGG + chr5_3:1420392-1420411 None:intergenic 25.0%
! TTAAAAGAATAAGGGTAACA+GGG - chr5_3:1420412-1420431 Msa0790580:CDS 25.0%
! TTTCAGATAGTTAAAGACAT+GGG + chr5_3:1420452-1420471 None:intergenic 25.0%
!! TTTTCAGATAGTTAAAGACA+TGG + chr5_3:1420453-1420472 None:intergenic 25.0%
! ACAACAAAATTACTTGTGAT+AGG + chr5_3:1420569-1420588 None:intergenic 25.0%
!! GGATTAACTATTTGAGATAT+AGG + chr5_3:1420890-1420909 None:intergenic 25.0%
! TTGATTAATATGCATTCTTG+TGG - chr5_3:1421042-1421061 Msa0790580:intron 25.0%
! AATAATTACTCAGAGAATGA+AGG + chr5_3:1421145-1421164 None:intergenic 25.0%
!!! TACTTCAAAAAAGTATCTCT+GGG + chr5_3:1421237-1421256 None:intergenic 25.0%
!!! ATACTTCAAAAAAGTATCTC+TGG + chr5_3:1421238-1421257 None:intergenic 25.0%
! TTATGTCATAAATAGGCTAT+TGG + chr5_3:1421395-1421414 None:intergenic 25.0%
!!! TTCTTTATTTTGTTGTGTGT+AGG - chr5_3:1421435-1421454 Msa0790580:intron 25.0%
!!! TCTTTATTTTGTTGTGTGTA+GGG - chr5_3:1421436-1421455 Msa0790580:intron 25.0%
! ATATCAGTAATCAAACCAAA+TGG - chr5_3:1421514-1421533 Msa0790580:intron 25.0%
! ATTATGATCTTTAATATGGG+AGG - chr5_3:1421538-1421557 Msa0790580:intron 25.0%
!! TTGTAAGAAATTGACAGTTT+TGG + chr5_3:1421925-1421944 None:intergenic 25.0%
! ACATTATAATTATAAAGCGC+TGG + chr5_3:1422250-1422269 None:intergenic 25.0%
! TGTATAGTCATGCAATATTA+TGG - chr5_3:1422267-1422286 Msa0790580:intron 25.0%
! GTATAGTCATGCAATATTAT+GGG - chr5_3:1422268-1422287 Msa0790580:intron 25.0%
! TATAATTTCCACATTTCTTC+TGG - chr5_3:1422513-1422532 Msa0790580:intron 25.0%
! AAGTCTCAAACATTCTTAAT+AGG - chr5_3:1422600-1422619 Msa0790580:intron 25.0%
!!! TTTGGAAGCATATTATTTTG+AGG - chr5_3:1422682-1422701 Msa0790580:intron 25.0%
!!! TTGGAAGCATATTATTTTGA+GGG - chr5_3:1422683-1422702 Msa0790580:intron 25.0%
! CATATTTGTGTATAGTAACA+AGG + chr5_3:1423194-1423213 None:intergenic 25.0%
! TATACACAAATATGTCAGTA+GGG - chr5_3:1423200-1423219 Msa0790580:intron 25.0%
! CACAAAATCTAAGAGAAATA+AGG - chr5_3:1423301-1423320 Msa0790580:intron 25.0%
! ACGAAAAACTAGAAGAAAAA+TGG - chr5_3:1423406-1423425 Msa0790580:intron 25.0%
! AAAATAGAAAGATTTCTGAC+GGG + chr5_3:1423521-1423540 None:intergenic 25.0%
! CAAAATAGAAAGATTTCTGA+CGG + chr5_3:1423522-1423541 None:intergenic 25.0%
! AACCAAACAAATTTACTATG+GGG + chr5_3:1423737-1423756 None:intergenic 25.0%
! GAACCAAACAAATTTACTAT+GGG + chr5_3:1423738-1423757 None:intergenic 25.0%
! TGAACCAAACAAATTTACTA+TGG + chr5_3:1423739-1423758 None:intergenic 25.0%
! TAAATATACAATTAGGCTTG+GGG + chr5_3:1424057-1424076 None:intergenic 25.0%
! CTAAATATACAATTAGGCTT+GGG + chr5_3:1424058-1424077 None:intergenic 25.0%
! AGAAGCCTAAATATACAATT+AGG + chr5_3:1424064-1424083 None:intergenic 25.0%
! AATTTGATTGTGTTAGTAGT+AGG + chr5_3:1424115-1424134 None:intergenic 25.0%
! ATGCAATAATCTGATAAAAC+TGG + chr5_3:1424719-1424738 None:intergenic 25.0%
! AGTCAGCTAATAAGTTAATA+TGG + chr5_3:1425102-1425121 None:intergenic 25.0%
! TTAATCAGTCAGTACTATTA+TGG - chr5_3:1425302-1425321 Msa0790580:intron 25.0%
! TAAAAGAAAATGAAAACGAC+AGG + chr5_3:1425395-1425414 None:intergenic 25.0%
!! TTTTCTCTCATTCAAATGTA+TGG + chr5_3:1425760-1425779 None:intergenic 25.0%
! TGAATGAGAGAAAATAAGAA+AGG - chr5_3:1425766-1425785 Msa0790580:intron 25.0%
! ACGATATAAAACAAAGTGAT+TGG - chr5_3:1425909-1425928 Msa0790580:intron 25.0%
! TTATCTTGAAGAAGTCTATA+TGG + chr5_3:1426085-1426104 None:intergenic 25.0%
!! AATGTTTCATCTCATTCTTT+TGG + chr5_3:1426649-1426668 None:intergenic 25.0%
!!! CATACAATTTTGAAGTTGAT+GGG - chr5_3:1426782-1426801 Msa0790580:intron 25.0%
! AAAACTAGACGATTATCAAT+AGG - chr5_3:1426940-1426959 Msa0790580:CDS 25.0%
! ATTAGTTCACTTTGATGTTT+GGG + chr5_3:1427008-1427027 None:intergenic 25.0%
! TTTACTATGCATGTTTAGTT+TGG + chr5_3:1427170-1427189 None:intergenic 25.0%
! AACTAAACATGCATAGTAAA+AGG - chr5_3:1427170-1427189 Msa0790580:intron 25.0%
! ACTAAACATGCATAGTAAAA+GGG - chr5_3:1427171-1427190 Msa0790580:intron 25.0%
! GCTGATATAGATTAAATTGA+AGG - chr5_3:1427345-1427364 Msa0790580:CDS 25.0%
!! TCTTTTGCAAATATAAGGTA+AGG + chr5_3:1427465-1427484 None:intergenic 25.0%
!! CTCAATCTTTTGCAAATATA+AGG + chr5_3:1427470-1427489 None:intergenic 25.0%
! TCATATTAGATCCTAACAAA+AGG + chr5_3:1427541-1427560 None:intergenic 25.0%
! ATTAGTAGGTGGTTAATTAT+AGG - chr5_3:1427577-1427596 Msa0790580:CDS 25.0%
! TTAGGTAGATTATTAGTAAG+CGG - chr5_3:1427601-1427620 Msa0790580:CDS 25.0%
! CTCTTATTATCTAATCCTAA+TGG + chr5_3:1427628-1427647 None:intergenic 25.0%
! CATTAGGATTAGATAATAAG+AGG - chr5_3:1427626-1427645 Msa0790580:CDS 25.0%
!! ATCTGTTTCTTCTTATAGTT+TGG - chr5_3:1427827-1427846 Msa0790580:intron 25.0%
! AGCATTATTAAGAACTGATA+CGG + chr5_3:1428113-1428132 None:intergenic 25.0%
! TTTCTTATTCTTAACCAGTT+GGG - chr5_3:1428835-1428854 Msa0790580:intron 25.0%
!! TGACACATTTTATAGTTTTC+CGG - chr5_3:1428864-1428883 Msa0790580:CDS 25.0%
!!! ATTGCTTTGTTTTTTATGGT+TGG - chr5_3:1429071-1429090 Msa0790580:intron 25.0%
!! AGAATGCTAAACAATTTTTG+GGG - chr5_3:1429115-1429134 Msa0790580:intron 25.0%
!!! CTTAATAGTCTTTTTGAGAT+AGG + chr5_3:1429225-1429244 None:intergenic 25.0%
! ATCTGATATACAAGTATTCT+TGG - chr5_3:1429486-1429505 Msa0790580:CDS 25.0%
!!! CATTCGTATTTTAAGGAATA+AGG - chr5_3:1429531-1429550 Msa0790580:CDS 25.0%
! TTTAAGGAATAAGGAAAGTT+TGG - chr5_3:1429540-1429559 Msa0790580:CDS 25.0%
! TTAAGGAATAAGGAAAGTTT+GGG - chr5_3:1429541-1429560 Msa0790580:CDS 25.0%
!! ATGTTTCTGTAATTCATTCA+TGG - chr5_3:1429693-1429712 Msa0790580:five_prime_UTR 25.0%
ATTCTGTTCTTTGACAAAAC+AGG + chr5_3:1419278-1419297 None:intergenic 30.0%
AGATGTCTTCAATACGAAAA+TGG + chr5_3:1419661-1419680 None:intergenic 30.0%
TCGTATTGAAGACATCTTAT+TGG - chr5_3:1419664-1419683 Msa0790580:CDS 30.0%
ATCTTATTGGATCAATACGA+GGG - chr5_3:1419677-1419696 Msa0790580:CDS 30.0%
AATCCCTTCATAAAAAGTGA+AGG + chr5_3:1419841-1419860 None:intergenic 30.0%
AACAATTCTGTCCTTGAAAA+TGG + chr5_3:1419880-1419899 None:intergenic 30.0%
AAATCATTTCTTCAGGTCTA+TGG - chr5_3:1420031-1420050 Msa0790580:intron 30.0%
ATTCAAGTATAGGTTTATCC+AGG + chr5_3:1420089-1420108 None:intergenic 30.0%
! CATCTAAAGCATTCAAGTAT+AGG + chr5_3:1420099-1420118 None:intergenic 30.0%
AATTCCATTATCTCTGCAAT+AGG + chr5_3:1420200-1420219 None:intergenic 30.0%
TGCAGGTTATTATAACTGTT+AGG - chr5_3:1420276-1420295 Msa0790580:CDS 30.0%
GTTAAAAGAATAAGGGTAAC+AGG - chr5_3:1420411-1420430 Msa0790580:CDS 30.0%
! CATTAGCTTCTTGATGAATT+TGG - chr5_3:1420990-1421009 Msa0790580:CDS 30.0%
TGATTAAGCTAAAACATCAC+TGG + chr5_3:1421021-1421040 None:intergenic 30.0%
TTAATATGCATTCTTGTGGT+TGG - chr5_3:1421046-1421065 Msa0790580:intron 30.0%
ATTTGGATTAAGAATCTGCA+CGG + chr5_3:1421075-1421094 None:intergenic 30.0%
!! ACTTCAAAAAAGTATCTCTG+GGG + chr5_3:1421236-1421255 None:intergenic 30.0%
TTGGCAAACTAAAATCATTC+AGG - chr5_3:1421624-1421643 Msa0790580:intron 30.0%
GTTCTTCTCAATTTCAACTA+AGG + chr5_3:1421746-1421765 None:intergenic 30.0%
TAAAGAATTCAAAACGGTGT+GGG + chr5_3:1421771-1421790 None:intergenic 30.0%
ATAAAGAATTCAAAACGGTG+TGG + chr5_3:1421772-1421791 None:intergenic 30.0%
!! ACACCGTTTTGAATTCTTTA+TGG - chr5_3:1421771-1421790 Msa0790580:intron 30.0%
!! CACCGTTTTGAATTCTTTAT+GGG - chr5_3:1421772-1421791 Msa0790580:intron 30.0%
!! ACCGTTTTGAATTCTTTATG+GGG - chr5_3:1421773-1421792 Msa0790580:intron 30.0%
ACTGTAAACTGATAAAGCAT+GGG + chr5_3:1421866-1421885 None:intergenic 30.0%
AACTGTAAACTGATAAAGCA+TGG + chr5_3:1421867-1421886 None:intergenic 30.0%
CAAGAATATTGTTATCCTGA+AGG - chr5_3:1421942-1421961 Msa0790580:intron 30.0%
! TTCTCTGGATTTGTATTTTG+AGG - chr5_3:1422049-1422068 Msa0790580:intron 30.0%
ACAGCAAAGATAAAACCAAA+TGG + chr5_3:1422331-1422350 None:intergenic 30.0%
! TTAATGCGTGGAATTTTGTT+TGG + chr5_3:1422423-1422442 None:intergenic 30.0%
CACGCATTAATGAATGAATA+GGG - chr5_3:1422433-1422452 Msa0790580:intron 30.0%
TCAAACATTCTTAATAGGCT+TGG - chr5_3:1422605-1422624 Msa0790580:intron 30.0%
CAAACATTCTTAATAGGCTT+GGG - chr5_3:1422606-1422625 Msa0790580:intron 30.0%
! TTTAAGGTTAAGAGTGTGTT+TGG + chr5_3:1423000-1423019 None:intergenic 30.0%
AAACACACTCTTAACCTTAA+AGG - chr5_3:1422999-1423018 Msa0790580:intron 30.0%
ATCAAGAACTTTCTTCTTTC+TGG - chr5_3:1423100-1423119 Msa0790580:intron 30.0%
CTATACACAAATATGTCAGT+AGG - chr5_3:1423199-1423218 Msa0790580:intron 30.0%
GGAAAAAGGTTACTTAAAGT+GGG + chr5_3:1423471-1423490 None:intergenic 30.0%
TGGAAAAAGGTTACTTAAAG+TGG + chr5_3:1423472-1423491 None:intergenic 30.0%
! TTCAAATGCATGATGGAAAA+AGG + chr5_3:1423485-1423504 None:intergenic 30.0%
! TTTTCCATCATGCATTTGAA+TGG - chr5_3:1423485-1423504 Msa0790580:intron 30.0%
AAATAGAAAGATTTCTGACG+GGG + chr5_3:1423520-1423539 None:intergenic 30.0%
! GTATATATTCATACTTGCTG+TGG - chr5_3:1423569-1423588 Msa0790580:intron 30.0%
AAGGAAAAATGACAACATTC+TGG + chr5_3:1423804-1423823 None:intergenic 30.0%
!!! ATGTTGTCATTTTTCCTTCA+AGG - chr5_3:1423806-1423825 Msa0790580:CDS 30.0%
CCTAAATATACAATTAGGCT+TGG + chr5_3:1424059-1424078 None:intergenic 30.0%
CCAAGCCTAATTGTATATTT+AGG - chr5_3:1424056-1424075 Msa0790580:CDS 30.0%
!! TACCATCACTTTTCAATGTA+AGG - chr5_3:1424167-1424186 Msa0790580:CDS 30.0%
TTCCTTACATTGAAAAGTGA+TGG + chr5_3:1424172-1424191 None:intergenic 30.0%
! AGTAGTTAAATTTAAGGCAG+GGG + chr5_3:1424376-1424395 None:intergenic 30.0%
! CAGTAGTTAAATTTAAGGCA+GGG + chr5_3:1424377-1424396 None:intergenic 30.0%
TGGTCCAGTAGTTAAATTTA+AGG + chr5_3:1424382-1424401 None:intergenic 30.0%
ACAAAAGCTACTTCTAAATC+TGG + chr5_3:1425212-1425231 None:intergenic 30.0%
! TTCTAGTAACTCAACAGTTT+TGG + chr5_3:1425270-1425289 None:intergenic 30.0%
AAAACTGTTGAGTTACTAGA+AGG - chr5_3:1425269-1425288 Msa0790580:CDS 30.0%
!! ATAGTACTGACTGATTAATG+CGG + chr5_3:1425300-1425319 None:intergenic 30.0%
TTCTTTCTTCAAAATTACCG+TGG + chr5_3:1425506-1425525 None:intergenic 30.0%
CTGTCATTATCTGCTTTAAT+AGG - chr5_3:1425714-1425733 Msa0790580:intron 30.0%
ATCTGCTTTAATAGGAGAAA+AGG - chr5_3:1425722-1425741 Msa0790580:intron 30.0%
TCATTCAAATGTATGGAATC+CGG + chr5_3:1425753-1425772 None:intergenic 30.0%
! GAGAAAATAAGAAAGGCATA+TGG - chr5_3:1425773-1425792 Msa0790580:intron 30.0%
TATCATCTACATAATCAACC+AGG - chr5_3:1425863-1425882 Msa0790580:intron 30.0%
CATACAAAACTACTGCAATA+TGG - chr5_3:1425945-1425964 Msa0790580:intron 30.0%
! TGGTAAGATTGATTGACTTA+AGG + chr5_3:1426282-1426301 None:intergenic 30.0%
AGTCAATCAATCTTACCATT+AGG - chr5_3:1426284-1426303 Msa0790580:intron 30.0%
!! ACTTCAAAGGTATCTCATAT+CGG + chr5_3:1426437-1426456 None:intergenic 30.0%
CATTTACTCCTCATGTATTT+AGG + chr5_3:1426577-1426596 None:intergenic 30.0%
TTATAAGATAGGACATGGTT+AGG - chr5_3:1426613-1426632 Msa0790580:intron 30.0%
TTCATACACCTACCAAAATA+GGG + chr5_3:1426728-1426747 None:intergenic 30.0%
CCATCAACTTCAAAATTGTA+TGG + chr5_3:1426784-1426803 None:intergenic 30.0%
!!! CCATACAATTTTGAAGTTGA+TGG - chr5_3:1426781-1426800 Msa0790580:intron 30.0%
CATTAGTTCACTTTGATGTT+TGG + chr5_3:1427009-1427028 None:intergenic 30.0%
ATCAAAGTGAACTAATGCAA+AGG - chr5_3:1427012-1427031 Msa0790580:CDS 30.0%
TCAAAGTGAACTAATGCAAA+GGG - chr5_3:1427013-1427032 Msa0790580:CDS 30.0%
ATGCGGTCAAGTAAATAAAT+GGG + chr5_3:1427046-1427065 None:intergenic 30.0%
TATGCGGTCAAGTAAATAAA+TGG + chr5_3:1427047-1427066 None:intergenic 30.0%
ATAGTGAGTCGTATCAATTT+GGG + chr5_3:1427085-1427104 None:intergenic 30.0%
CTAGATAATTTGGAAAGACT+AGG - chr5_3:1427110-1427129 Msa0790580:intron 30.0%
TAAAAGGGAAATCTTTGACA+TGG - chr5_3:1427186-1427205 Msa0790580:intron 30.0%
TGTGTCATCACTTTAACTAA+TGG + chr5_3:1427304-1427323 None:intergenic 30.0%
AATCTTGAGAATGAGTCAAT+CGG - chr5_3:1427323-1427342 Msa0790580:CDS 30.0%
ATTAGATCCTAACAAAAGGT+TGG + chr5_3:1427537-1427556 None:intergenic 30.0%
AGGTGGTTAATTATAGGTTT+AGG - chr5_3:1427583-1427602 Msa0790580:CDS 30.0%
GTATATAAAGGGGAATTCTT+TGG - chr5_3:1427686-1427705 Msa0790580:intron 30.0%
!! ACAGATTGAGTTTTGTGTTT+AGG - chr5_3:1427723-1427742 Msa0790580:intron 30.0%
!! CAGATTGAGTTTTGTGTTTA+GGG - chr5_3:1427724-1427743 Msa0790580:intron 30.0%
TGTGGCGATTAAAGAAAATA+TGG + chr5_3:1427808-1427827 None:intergenic 30.0%
ACTATAAGAAGAAACAGATG+TGG + chr5_3:1427826-1427845 None:intergenic 30.0%
AGTAATGAGAAAACTAACCA+CGG + chr5_3:1428014-1428033 None:intergenic 30.0%
! GTCAAATCAGTTGATATGAT+AGG - chr5_3:1428073-1428092 Msa0790580:intron 30.0%
!!! GACGAATTTTTTTATGCTTG+TGG + chr5_3:1428281-1428300 None:intergenic 30.0%
AAATTCGTCAAAAGCAACTA+CGG - chr5_3:1428292-1428311 Msa0790580:intron 30.0%
! AAAAGCTCTTTTCAACAAAC+TGG - chr5_3:1428360-1428379 Msa0790580:intron 30.0%
TTTATAGCAACAAGGAGATA+GGG - chr5_3:1428605-1428624 Msa0790580:intron 30.0%
ATAATTGATACTTCATCCTC+TGG - chr5_3:1428667-1428686 Msa0790580:intron 30.0%
GTTTCTTATTCTTAACCAGT+TGG - chr5_3:1428834-1428853 Msa0790580:intron 30.0%
! GACACATTTTATAGTTTTCC+GGG - chr5_3:1428865-1428884 Msa0790580:CDS 30.0%
GCATATTTAACAGTACTATG+AGG + chr5_3:1428901-1428920 None:intergenic 30.0%
!! GAATGCTAAACAATTTTTGG+GGG - chr5_3:1429116-1429135 Msa0790580:intron 30.0%
!!! AATAGTCTTTTTGAGATAGG+CGG + chr5_3:1429222-1429241 None:intergenic 30.0%
AAGCTGAAGATTTCATCAAA+AGG - chr5_3:1429242-1429261 Msa0790580:CDS 30.0%
! AAATGATTTCAAGAAAGCAC+TGG - chr5_3:1429415-1429434 Msa0790580:CDS 30.0%
AAATTTAGAGAAGTTGCACT+AGG - chr5_3:1429449-1429468 Msa0790580:CDS 30.0%
TACTTGTATATCAGATGACA+CGG + chr5_3:1429482-1429501 None:intergenic 30.0%
! TGCATGTCATTCGTATTTTA+AGG - chr5_3:1429524-1429543 Msa0790580:CDS 30.0%
! TTTTGTTCCTCTTGTTAACA+CGG - chr5_3:1429566-1429585 Msa0790580:CDS 30.0%
!!! TCGTCCATTTTTTATTTGCA+TGG - chr5_3:1429593-1429612 Msa0790580:CDS 30.0%
CACACCATGCAAATAAAAAA+TGG + chr5_3:1429600-1429619 None:intergenic 30.0%
TAGGACAGGATTTAAAAAGT+CGG - chr5_3:1429763-1429782 Msa0790580:five_prime_UTR 30.0%
AAAAATAGTGAAGACATGCA+CGG + chr5_3:1429804-1429823 None:intergenic 30.0%
TTCTTTGACAAAACAGGAGT+TGG + chr5_3:1419272-1419291 None:intergenic 35.0%
CATCTTATTGGATCAATACG+AGG - chr5_3:1419676-1419695 Msa0790580:CDS 35.0%
TGAAAATTGCATTGCATTGC+AGG - chr5_3:1419750-1419769 Msa0790580:CDS 35.0%
GAAAATTGCATTGCATTGCA+GGG - chr5_3:1419751-1419770 Msa0790580:CDS 35.0%
!!! TGGTCCTTCACTTTTTATGA+AGG - chr5_3:1419834-1419853 Msa0790580:CDS 35.0%
!!! GGTCCTTCACTTTTTATGAA+GGG - chr5_3:1419835-1419854 Msa0790580:CDS 35.0%
!! GACAGAATTGTTTCTGAGTT+AGG - chr5_3:1419888-1419907 Msa0790580:CDS 35.0%
!! ATTGTTTCTGAGTTAGGTTG+TGG - chr5_3:1419894-1419913 Msa0790580:CDS 35.0%
AAACAAACAAACACCTTGGA+AGG + chr5_3:1419960-1419979 None:intergenic 35.0%
CAACAAACAAACAAACACCT+TGG + chr5_3:1419964-1419983 None:intergenic 35.0%
AGAAGAAAACTTTGTTGGAC+AGG - chr5_3:1420146-1420165 Msa0790580:CDS 35.0%
GAAGAAAACTTTGTTGGACA+GGG - chr5_3:1420147-1420166 Msa0790580:CDS 35.0%
CTATCCTATTGCAGAGATAA+TGG - chr5_3:1420193-1420212 Msa0790580:CDS 35.0%
AATTGTAGGATGTATTCCTC+AGG - chr5_3:1420231-1420250 Msa0790580:CDS 35.0%
AATTCCAGAACTATCTATGC+AGG - chr5_3:1420259-1420278 Msa0790580:CDS 35.0%
ATAACCTGCATAGATAGTTC+TGG + chr5_3:1420266-1420285 None:intergenic 35.0%
CGAAAGGACTTGTATGTTAA+GGG + chr5_3:1420328-1420347 None:intergenic 35.0%
CCTTAACATACAAGTCCTTT+CGG - chr5_3:1420326-1420345 Msa0790580:CDS 35.0%
CTCAGATTCTTAGAGAGAAA+GGG + chr5_3:1420951-1420970 None:intergenic 35.0%
! GAATCTGAGGTATTCTAGTA+TGG - chr5_3:1420962-1420981 Msa0790580:CDS 35.0%
TTTGGATTAAGAATCTGCAC+GGG + chr5_3:1421074-1421093 None:intergenic 35.0%
TTAGTCATTGCATCTGGATT+TGG + chr5_3:1421092-1421111 None:intergenic 35.0%
ATCATCTTAGTCATTGCATC+TGG + chr5_3:1421098-1421117 None:intergenic 35.0%
GATAACAGAAAATGCTAGTG+AGG - chr5_3:1421115-1421134 Msa0790580:intron 35.0%
GAGTAATTATTGTGCACTTC+AGG - chr5_3:1421154-1421173 Msa0790580:intron 35.0%
CAATTAAACCTAACCCAAAC+TGG + chr5_3:1421474-1421493 None:intergenic 35.0%
! TTGGGTTAGGTTTAATTGCA+AGG - chr5_3:1421476-1421495 Msa0790580:intron 35.0%
! TGGGTTAGGTTTAATTGCAA+GGG - chr5_3:1421477-1421496 Msa0790580:intron 35.0%
! GTTTTCGCATTACAAAGCTT+TGG - chr5_3:1421605-1421624 Msa0790580:intron 35.0%
TCAATAAGCTACACTTTCAC+TGG + chr5_3:1421686-1421705 None:intergenic 35.0%
TGTAGCTTATTGAGATGTAC+TGG - chr5_3:1421693-1421712 Msa0790580:intron 35.0%
! TTATTGAGATGTACTGGTAC+AGG - chr5_3:1421699-1421718 Msa0790580:intron 35.0%
GCCCCATAAAGAATTCAAAA+CGG + chr5_3:1421777-1421796 None:intergenic 35.0%
TTGTGCTTCAAAATTCCTTC+AGG + chr5_3:1421960-1421979 None:intergenic 35.0%
CAATGCAATTTGATACTTGC+AGG - chr5_3:1421977-1421996 Msa0790580:intron 35.0%
! CTATTTTCCATATGAACCAC+CGG - chr5_3:1422139-1422158 Msa0790580:intron 35.0%
AAAATCCAGCAATGAGATTG+CGG + chr5_3:1422181-1422200 None:intergenic 35.0%
GGTATGTCATCTTGTAAGTA+TGG - chr5_3:1422384-1422403 Msa0790580:intron 35.0%
CCTATTCATTCATTAATGCG+TGG + chr5_3:1422435-1422454 None:intergenic 35.0%
CCACGCATTAATGAATGAAT+AGG - chr5_3:1422432-1422451 Msa0790580:intron 35.0%
! TTCCACATTTCTTCTGGTTA+TGG - chr5_3:1422519-1422538 Msa0790580:intron 35.0%
! TCCACATTTCTTCTGGTTAT+GGG - chr5_3:1422520-1422539 Msa0790580:intron 35.0%
AATTCCTAAGAGATACAAGC+TGG - chr5_3:1422733-1422752 Msa0790580:intron 35.0%
! ATACAAGCTGGAAGTCTTTT+AGG - chr5_3:1422745-1422764 Msa0790580:intron 35.0%
! TACAAGCTGGAAGTCTTTTA+GGG - chr5_3:1422746-1422765 Msa0790580:intron 35.0%
TTTGGATTGAGGGTTTAGAA+GGG + chr5_3:1422982-1423001 None:intergenic 35.0%
! TAAGAGTGTGTTTGGATTGA+GGG + chr5_3:1422992-1423011 None:intergenic 35.0%
! TTAAGAGTGTGTTTGGATTG+AGG + chr5_3:1422993-1423012 None:intergenic 35.0%
TGCAAGTTAGAAGACCTTTA+AGG + chr5_3:1423016-1423035 None:intergenic 35.0%
AGCATATAGTTTGGTCATTC+TGG + chr5_3:1423135-1423154 None:intergenic 35.0%
ATAGTAACAAGGAGAAGAGA+AGG + chr5_3:1423183-1423202 None:intergenic 35.0%
GCTATAACTTAGATGACAAC+TGG + chr5_3:1423226-1423245 None:intergenic 35.0%
! ATAGAATCAGAAGAGCATGT+AGG + chr5_3:1423265-1423284 None:intergenic 35.0%
AAGAGAAATAAGGGATAAGC+TGG - chr5_3:1423311-1423330 Msa0790580:intron 35.0%
! TCTTATTTCAATTGGTCTCC+TGG - chr5_3:1423429-1423448 Msa0790580:intron 35.0%
! TGCCCCATAGTAAATTTGTT+TGG - chr5_3:1423732-1423751 Msa0790580:CDS 35.0%
! CATTTTTCCTTCAAGGAATG+CGG - chr5_3:1423813-1423832 Msa0790580:CDS 35.0%
TTTAGGCTTCTTCCTTACAT+AGG - chr5_3:1424073-1424092 Msa0790580:CDS 35.0%
AATAGTTGTTGACACAGTAC+AGG - chr5_3:1424135-1424154 Msa0790580:CDS 35.0%
! TAGTTAAATTTAAGGCAGGG+GGG + chr5_3:1424374-1424393 None:intergenic 35.0%
! GTAGTTAAATTTAAGGCAGG+GGG + chr5_3:1424375-1424394 None:intergenic 35.0%
! CCAGTAGTTAAATTTAAGGC+AGG + chr5_3:1424378-1424397 None:intergenic 35.0%
CCTGCCTTAAATTTAACTAC+TGG - chr5_3:1424375-1424394 Msa0790580:intron 35.0%
ATAAGATCTGCTGTGTTGTA+TGG + chr5_3:1424444-1424463 None:intergenic 35.0%
!! TTTGATTTTTGCTCACAGCA+AGG - chr5_3:1424489-1424508 Msa0790580:intron 35.0%
AAAGGAGATAAAGATGCACA+AGG + chr5_3:1424577-1424596 None:intergenic 35.0%
AAAGAAATTGAAGCCTCAAG+TGG - chr5_3:1424853-1424872 Msa0790580:intron 35.0%
!!! GACTGGAATTGCTATTTTTG+AGG - chr5_3:1424880-1424899 Msa0790580:intron 35.0%
! ATTAGCTGACTTAGACTGTA+TGG - chr5_3:1425111-1425130 Msa0790580:intron 35.0%
! CTAACAACCAATGTTTTTCC+AGG - chr5_3:1425181-1425200 Msa0790580:CDS 35.0%
GGATAAACCTGGAAAAACAT+TGG + chr5_3:1425191-1425210 None:intergenic 35.0%
CTTCTAAATCTGGATAAACC+TGG + chr5_3:1425202-1425221 None:intergenic 35.0%
TGCATCTGTTCTTTCATTTG+TGG - chr5_3:1425463-1425482 Msa0790580:intron 35.0%
GGAAGTTCTTTCATGCAATT+AGG + chr5_3:1425554-1425573 None:intergenic 35.0%
TACAACTCCTTGTGTGAATT+TGG + chr5_3:1425601-1425620 None:intergenic 35.0%
AGTTGTATCGTTGTCATTCA+TGG - chr5_3:1425614-1425633 Msa0790580:intron 35.0%
GTTGTATCGTTGTCATTCAT+GGG - chr5_3:1425615-1425634 Msa0790580:intron 35.0%
TTGTATCGTTGTCATTCATG+GGG - chr5_3:1425616-1425635 Msa0790580:intron 35.0%
ATGCTTTCACCAGTTATTAC+AGG - chr5_3:1425651-1425670 Msa0790580:intron 35.0%
AATAGGAGAAAAGGATAACC+CGG - chr5_3:1425731-1425750 Msa0790580:intron 35.0%
CATTCAAATGTATGGAATCC+GGG + chr5_3:1425752-1425771 None:intergenic 35.0%
GTAGATGATATTGTCAGAAC+TGG + chr5_3:1425853-1425872 None:intergenic 35.0%
! GGAACTGTTTAAGACCATAT+AGG - chr5_3:1425995-1426014 Msa0790580:intron 35.0%
TTCTCCTGAGAAATAAACTC+AGG - chr5_3:1426051-1426070 Msa0790580:intron 35.0%
AGATGTCAGATGTCTTACAA+AGG - chr5_3:1426183-1426202 Msa0790580:intron 35.0%
! TCTTCAGCTTTATATGGTGA+AGG + chr5_3:1426315-1426334 None:intergenic 35.0%
TTCACCATATAAAGCTGAAG+AGG - chr5_3:1426314-1426333 Msa0790580:intron 35.0%
! TGTTCCTCTTCAGCTTTATA+TGG + chr5_3:1426321-1426340 None:intergenic 35.0%
GGCATAGCAACAATAATTGT+AGG - chr5_3:1426347-1426366 Msa0790580:intron 35.0%
ATAATTGTAGGAAGAGACCT+TGG - chr5_3:1426359-1426378 Msa0790580:intron 35.0%
GTATGGAACAAACTCGAAAA+AGG - chr5_3:1426402-1426421 Msa0790580:intron 35.0%
!! ATGAGATACCTTTGAAGTGT+AGG - chr5_3:1426439-1426458 Msa0790580:intron 35.0%
!!! CGATAACGTTTTTGAGATTG+AGG - chr5_3:1426472-1426491 Msa0790580:intron 35.0%
! GATCACTCAAGTGTCTATTT+TGG + chr5_3:1426502-1426521 None:intergenic 35.0%
CATGTGAACCTAAATACATG+AGG - chr5_3:1426566-1426585 Msa0790580:intron 35.0%
AGGCATGCGATTTATAAGAT+AGG - chr5_3:1426602-1426621 Msa0790580:intron 35.0%
GCGATTTATAAGATAGGACA+TGG - chr5_3:1426608-1426627 Msa0790580:intron 35.0%
! GTTTCATCTCATTCTTTTGG+AGG + chr5_3:1426646-1426665 None:intergenic 35.0%
GAGATGAAACATTACCATGA+AGG - chr5_3:1426656-1426675 Msa0790580:intron 35.0%
!!! TTCAACTACCCTATTTTGGT+AGG - chr5_3:1426717-1426736 Msa0790580:intron 35.0%
GTTCATACACCTACCAAAAT+AGG + chr5_3:1426729-1426748 None:intergenic 35.0%
TTGTTGAAGAATGTCATCCA+AGG - chr5_3:1426758-1426777 Msa0790580:intron 35.0%
ACTTCAAAATTGTATGGCCT+TGG + chr5_3:1426778-1426797 None:intergenic 35.0%
ATCACTGTGTAAAGTGCAAA+TGG - chr5_3:1426824-1426843 Msa0790580:intron 35.0%
CAAAGTGAACTAATGCAAAG+GGG - chr5_3:1427014-1427033 Msa0790580:CDS 35.0%
AAAGTGAACTAATGCAAAGG+GGG - chr5_3:1427015-1427034 Msa0790580:CDS 35.0%
CATAGTGAGTCGTATCAATT+TGG + chr5_3:1427086-1427105 None:intergenic 35.0%
TCTTCTCAAACTTCAAAAGC+TGG + chr5_3:1427138-1427157 None:intergenic 35.0%
GGTTTGACAAGAGATAATAG+AGG - chr5_3:1427218-1427237 Msa0790580:CDS 35.0%
GAATTTGTCCTTTATGAGCT+TGG + chr5_3:1427376-1427395 None:intergenic 35.0%
!! GCATTGATTACTGTTATGAC+AGG - chr5_3:1427397-1427416 Msa0790580:intron 35.0%
ATTACTGTTATGACAGGATC+AGG - chr5_3:1427403-1427422 Msa0790580:intron 35.0%
TTACTGTTATGACAGGATCA+GGG - chr5_3:1427404-1427423 Msa0790580:intron 35.0%
TTTGCAAAAGATTGAGTGCA+CGG - chr5_3:1427474-1427493 Msa0790580:CDS 35.0%
TTATTAGTAAGCGGACCATT+AGG - chr5_3:1427610-1427629 Msa0790580:CDS 35.0%
TAGATAATAAGAGGCCTGTT+TGG - chr5_3:1427635-1427654 Msa0790580:intron 35.0%
AGATAATAAGAGGCCTGTTT+GGG - chr5_3:1427636-1427655 Msa0790580:intron 35.0%
AATTCGATTGTAGGATCCTT+TGG - chr5_3:1427863-1427882 Msa0790580:intron 35.0%
AAAGCCCCTCTTCATTATTA+TGG - chr5_3:1427905-1427924 Msa0790580:intron 35.0%
AAGCCCCTCTTCATTATTAT+GGG - chr5_3:1427906-1427925 Msa0790580:intron 35.0%
GTAATGAGAAAACTAACCAC+GGG + chr5_3:1428013-1428032 None:intergenic 35.0%
! TGACATTTTCACAGATTCTC+TGG + chr5_3:1428057-1428076 None:intergenic 35.0%
AGATTTGATCAACATCCATG+TGG + chr5_3:1428174-1428193 None:intergenic 35.0%
AGAATATATAAACTCCGTGC+TGG + chr5_3:1428332-1428351 None:intergenic 35.0%
TTGCTATAAACTAAGCCAGT+GGG + chr5_3:1428595-1428614 None:intergenic 35.0%
TGGCTTAGTTTATAGCAACA+AGG - chr5_3:1428597-1428616 Msa0790580:intron 35.0%
GTTTATAGCAACAAGGAGAT+AGG - chr5_3:1428604-1428623 Msa0790580:intron 35.0%
TTATAGCAACAAGGAGATAG+GGG - chr5_3:1428606-1428625 Msa0790580:intron 35.0%
! GGTTTGGAATTTGACAGTAA+AGG - chr5_3:1428688-1428707 Msa0790580:intron 35.0%
TTGTCTCTTAAGATGCTCAA+TGG - chr5_3:1428796-1428815 Msa0790580:intron 35.0%
TCAATGGTGTTCTCAGATTT+GGG - chr5_3:1428812-1428831 Msa0790580:intron 35.0%
TATTCTTAACCAGTTGGGTT+TGG - chr5_3:1428840-1428859 Msa0790580:intron 35.0%
CTATGAGGTTTACTTAATCC+CGG + chr5_3:1428886-1428905 None:intergenic 35.0%
ACTATTGATGCATAAACCTG+TGG + chr5_3:1429342-1429361 None:intergenic 35.0%
ACAGGTTTATGCATCAATAG+TGG - chr5_3:1429341-1429360 Msa0790580:intron 35.0%
ATATTGAACCGACAATATCC+AGG + chr5_3:1429383-1429402 None:intergenic 35.0%
ACTTGTATATCAGATGACAC+GGG + chr5_3:1429481-1429500 None:intergenic 35.0%
TGTAATTCATTCATGGTGTG+AGG - chr5_3:1429700-1429719 Msa0790580:five_prime_UTR 35.0%
AACAACCTAGTACTATCTGT+AGG - chr5_3:1429744-1429763 Msa0790580:five_prime_UTR 35.0%
TCTTCAGGGAGAAAAATGCT+AGG + chr5_3:1419813-1419832 None:intergenic 40.0%
TGTCCTTGAAAATGGAGTCA+GGG + chr5_3:1419872-1419891 None:intergenic 40.0%
! TCTGAGTTAGGTTGTGGAAA+TGG - chr5_3:1419900-1419919 Msa0790580:CDS 40.0%
! AGTTAGGTTGTGGAAATGGA+TGG - chr5_3:1419904-1419923 Msa0790580:CDS 40.0%
!! CAGCTCTAGGATTGATATCA+AGG + chr5_3:1420057-1420076 None:intergenic 40.0%
!! CAGGAAATTTTGACAGCTCT+AGG + chr5_3:1420070-1420089 None:intergenic 40.0%
CTAGAGCTGTCAAAATTTCC+TGG - chr5_3:1420068-1420087 Msa0790580:intron 40.0%
TTCTTCTCCTCGTCATAGAT+GGG + chr5_3:1420133-1420152 None:intergenic 40.0%
TTTCTTCTCCTCGTCATAGA+TGG + chr5_3:1420134-1420153 None:intergenic 40.0%
CGAGGAGAAGAAAACTTTGT+TGG - chr5_3:1420141-1420160 Msa0790580:CDS 40.0%
!! GTTCTGGAATTACTTACCTG+AGG + chr5_3:1420250-1420269 None:intergenic 40.0%
CCGAAAGGACTTGTATGTTA+AGG + chr5_3:1420329-1420348 None:intergenic 40.0%
TTGTATAGCGTCAATCCGAA+AGG + chr5_3:1420344-1420363 None:intergenic 40.0%
CCTCAGATTCTTAGAGAGAA+AGG + chr5_3:1420952-1420971 None:intergenic 40.0%
! CCTTTCTCTCTAAGAATCTG+AGG - chr5_3:1420949-1420968 Msa0790580:CDS 40.0%
CAACATAGCTAGTAGAATGC+TGG + chr5_3:1421207-1421226 None:intergenic 40.0%
TTTATCCCTTCTTCACCAGT+CGG - chr5_3:1421327-1421346 Msa0790580:intron 40.0%
! TTGTTGTGTGTAGGGTTTTG+TGG - chr5_3:1421444-1421463 Msa0790580:intron 40.0%
! TTTTGCAAACACCTTGTCCT+GGG + chr5_3:1421567-1421586 None:intergenic 40.0%
GCAAAAGATTGTTTGAGCGT+CGG - chr5_3:1421581-1421600 Msa0790580:intron 40.0%
CAAAAGATTGTTTGAGCGTC+GGG - chr5_3:1421582-1421601 Msa0790580:intron 40.0%
! AAAAGATTGTTTGAGCGTCG+GGG - chr5_3:1421583-1421602 Msa0790580:intron 40.0%
GAATTCTTTATGGGGCTTTC+TGG - chr5_3:1421781-1421800 Msa0790580:intron 40.0%
CTTGCAAGATAAGCAAGGAA+AGG + chr5_3:1422101-1422120 None:intergenic 40.0%
GAATGCTTGCAAGATAAGCA+AGG + chr5_3:1422106-1422125 None:intergenic 40.0%
CGGTGGTTCATATGGAAAAT+AGG + chr5_3:1422141-1422160 None:intergenic 40.0%
! GCATAACATGATGTGCCATT+TGG - chr5_3:1422313-1422332 Msa0790580:intron 40.0%
ACCCATAACCAGAAGAAATG+TGG + chr5_3:1422524-1422543 None:intergenic 40.0%
! ACATTTCTTCTGGTTATGGG+TGG - chr5_3:1422523-1422542 Msa0790580:intron 40.0%
!! AAGAGTCAGGGAGTACATTT+TGG - chr5_3:1422634-1422653 Msa0790580:intron 40.0%
ACTTCCAGCTTGTATCTCTT+AGG + chr5_3:1422740-1422759 None:intergenic 40.0%
!!! GAAGTCTTTTAGGGTGTGTT+TGG - chr5_3:1422755-1422774 Msa0790580:intron 40.0%
!!! TCTTTTAGGGTGTGTTTGGA+TGG - chr5_3:1422759-1422778 Msa0790580:intron 40.0%
TTGGATTGAGGGTTTAGAAG+GGG + chr5_3:1422981-1423000 None:intergenic 40.0%
GTTTGGATTGAGGGTTTAGA+AGG + chr5_3:1422983-1423002 None:intergenic 40.0%
TTTACACCTCAGCTGTTGAA+TGG - chr5_3:1423043-1423062 Msa0790580:intron 40.0%
GTTGAACGCAGCATATAGTT+TGG + chr5_3:1423144-1423163 None:intergenic 40.0%
AGAAGAGAAGGATTAAGAGG+AGG + chr5_3:1423171-1423190 None:intergenic 40.0%
AGGAGAAGAGAAGGATTAAG+AGG + chr5_3:1423174-1423193 None:intergenic 40.0%
TCCATCATGCATTTGAATGG+CGG - chr5_3:1423488-1423507 Msa0790580:intron 40.0%
!! TCATACTTGCTGTGGCTAAT+TGG - chr5_3:1423577-1423596 Msa0790580:intron 40.0%
ACGTGTAAACCATTCTACTC+AGG - chr5_3:1423690-1423709 Msa0790580:intron 40.0%
! AATCACTAGCCTGAGTAGAA+TGG + chr5_3:1423702-1423721 None:intergenic 40.0%
TTCTACTCAGGCTAGTGATT+AGG - chr5_3:1423702-1423721 Msa0790580:intron 40.0%
AAAGATGTTAACCACTGCCT+GGG + chr5_3:1423910-1423929 None:intergenic 40.0%
GTTAACATCTTTGGCACTTG+AGG - chr5_3:1423918-1423937 Msa0790580:intron 40.0%
CACTTGAGGTATGAATGTCA+TGG - chr5_3:1423932-1423951 Msa0790580:intron 40.0%
CAATCACAAGGACCTATGTA+AGG + chr5_3:1424088-1424107 None:intergenic 40.0%
CTTACATAGGTCCTTGTGAT+TGG - chr5_3:1424086-1424105 Msa0790580:CDS 40.0%
! CAACCAAGTCTTTTCCCATT+AGG - chr5_3:1424225-1424244 Msa0790580:CDS 40.0%
! CAAGTCTTTTCCCATTAGGT+GGG - chr5_3:1424229-1424248 Msa0790580:CDS 40.0%
! TGACATTGATTGATCCATGC+AGG + chr5_3:1424259-1424278 None:intergenic 40.0%
AGGCGATTAAACCAGATAGA+GGG + chr5_3:1424405-1424424 None:intergenic 40.0%
AAGGCGATTAAACCAGATAG+AGG + chr5_3:1424406-1424425 None:intergenic 40.0%
ACTTAGTTGCAATTGGAGAC+TGG - chr5_3:1424522-1424541 Msa0790580:intron 40.0%
! ACTTGTATTCCCCTGTTTTG+AGG - chr5_3:1424632-1424651 Msa0790580:intron 40.0%
TTCCAGCAATCCTCAAAACA+GGG + chr5_3:1424645-1424664 None:intergenic 40.0%
TAACAGTAATTGAAGCCCCT+CGG - chr5_3:1424804-1424823 Msa0790580:intron 40.0%
TCATTAAGTCTGATTGCCGA+GGG + chr5_3:1424823-1424842 None:intergenic 40.0%
ATCATTAAGTCTGATTGCCG+AGG + chr5_3:1424824-1424843 None:intergenic 40.0%
TTAGATACAACGCGAGATGT+TGG - chr5_3:1424932-1424951 Msa0790580:intron 40.0%
! TGTTGGATCTCGTCTTTTCT+TGG - chr5_3:1424949-1424968 Msa0790580:intron 40.0%
GACTTCCTGAAAGATACTTC+AGG + chr5_3:1425024-1425043 None:intergenic 40.0%
CAAATAATTGCCGCATGAGA+GGG + chr5_3:1425052-1425071 None:intergenic 40.0%
TCTCATGCGGCAATTATTTG+CGG - chr5_3:1425052-1425071 Msa0790580:intron 40.0%
TGAAAGAACAGATGCATCTC+AGG + chr5_3:1425459-1425478 None:intergenic 40.0%
TTTGTGGCTCCGTATATATC+TGG - chr5_3:1425479-1425498 Msa0790580:intron 40.0%
TACCGTGGTCCAGATATATA+CGG + chr5_3:1425491-1425510 None:intergenic 40.0%
TTGTGTGAATTTGGAAGGCA+CGG + chr5_3:1425592-1425611 None:intergenic 40.0%
ACTCCTTGTGTGAATTTGGA+AGG + chr5_3:1425597-1425616 None:intergenic 40.0%
CTTTCACCAGTTATTACAGG+AGG - chr5_3:1425654-1425673 Msa0790580:intron 40.0%
ACCAGTTATTACAGGAGGTT+AGG - chr5_3:1425659-1425678 Msa0790580:intron 40.0%
CCAGTTATTACAGGAGGTTA+GGG - chr5_3:1425660-1425679 Msa0790580:intron 40.0%
GCAGATAATGACAGTCTGTT+TGG + chr5_3:1425708-1425727 None:intergenic 40.0%
AACCAGGTAAATGCACTGTT+GGG - chr5_3:1425879-1425898 Msa0790580:intron 40.0%
AAGTCGACAAACCATGGTAA+AGG - chr5_3:1426026-1426045 Msa0790580:intron 40.0%
TCCTGAGAAATAAACTCAGG+TGG - chr5_3:1426054-1426073 Msa0790580:intron 40.0%
! ACCACCTGAGTTTATTTCTC+AGG + chr5_3:1426058-1426077 None:intergenic 40.0%
GTCAGATGTCTGCAATAGAA+AGG - chr5_3:1426151-1426170 Msa0790580:intron 40.0%
ATGTCTTACAAAGGCCATTC+TGG - chr5_3:1426192-1426211 Msa0790580:intron 40.0%
TTTCTAACCTGTTGCCAGAA+TGG + chr5_3:1426209-1426228 None:intergenic 40.0%
! CAGCTTTATATGGTGAAGGT+TGG + chr5_3:1426311-1426330 None:intergenic 40.0%
AGCTGAAGAGGAACAATAGA+AGG - chr5_3:1426326-1426345 Msa0790580:intron 40.0%
TAAGTGGGTCACTCAAAGTA+TGG - chr5_3:1426385-1426404 Msa0790580:intron 40.0%
GCTATTCTCCTACACTTCAA+AGG + chr5_3:1426450-1426469 None:intergenic 40.0%
TCCTGATCTTGACAAACTCT+GGG + chr5_3:1426528-1426547 None:intergenic 40.0%
CATGAGGAGTAAATGAGTGA+AGG - chr5_3:1426582-1426601 Msa0790580:intron 40.0%
GGGTAGTTGAACGCAAAAAT+CGG + chr5_3:1426708-1426727 None:intergenic 40.0%
! TGCGTTCAACTACCCTATTT+TGG - chr5_3:1426713-1426732 Msa0790580:intron 40.0%
AAAGTGGAAATAGTGCGAGA+AGG - chr5_3:1426980-1426999 Msa0790580:CDS 40.0%
TCTTTGACATGGCATGTCAT+TGG - chr5_3:1427197-1427216 Msa0790580:CDS 40.0%
! GGGATAAGTTGGATTCACTA+TGG - chr5_3:1427424-1427443 Msa0790580:intron 40.0%
! AGTAGCTCCAACCTTTTGTT+AGG - chr5_3:1427527-1427546 Msa0790580:CDS 40.0%
!! TTGAGTTTTGTGTTTAGGGC+TGG - chr5_3:1427728-1427747 Msa0790580:intron 40.0%
GCAAAGGTTATAGGAACCAA+AGG + chr5_3:1427882-1427901 None:intergenic 40.0%
! GGCTTTAGTGCAAAGGTTAT+AGG + chr5_3:1427891-1427910 None:intergenic 40.0%
AGCCCCTCTTCATTATTATG+GGG - chr5_3:1427907-1427926 Msa0790580:intron 40.0%
CTCCCCATAATAATGAAGAG+GGG + chr5_3:1427912-1427931 None:intergenic 40.0%
GCTCCCCATAATAATGAAGA+GGG + chr5_3:1427913-1427932 None:intergenic 40.0%
TGCTCCCCATAATAATGAAG+AGG + chr5_3:1427914-1427933 None:intergenic 40.0%
! CGTGAATTAGTTTATTCCCG+TGG - chr5_3:1427994-1428013 Msa0790580:CDS 40.0%
! CATTTTCACAGATTCTCTGG+AGG + chr5_3:1428054-1428073 None:intergenic 40.0%
AATGCTGAGCTAGCAATTGA+CGG - chr5_3:1428127-1428146 Msa0790580:intron 40.0%
ATCAACATCCATGTGGATCA+GGG + chr5_3:1428167-1428186 None:intergenic 40.0%
TCAAAAATAGCAGCCTTGAC+AGG + chr5_3:1428214-1428233 None:intergenic 40.0%
! AAGCAACTACGGTTTTCCAA+CGG - chr5_3:1428303-1428322 Msa0790580:intron 40.0%
GTCCTCTGTTGCATTAAAGA+AGG - chr5_3:1428382-1428401 Msa0790580:intron 40.0%
CACCTTCTTTAATGCAACAG+AGG + chr5_3:1428387-1428406 None:intergenic 40.0%
CTCTGTTGCATTAAAGAAGG+TGG - chr5_3:1428385-1428404 Msa0790580:intron 40.0%
! TGTTTTCCAGCTGGATCAAA+TGG - chr5_3:1428415-1428434 Msa0790580:intron 40.0%
! GTTTTCCAGCTGGATCAAAT+GGG - chr5_3:1428416-1428435 Msa0790580:intron 40.0%
!!! CAGCGTAGGTTTTAAGTTCA+CGG - chr5_3:1428498-1428517 Msa0790580:intron 40.0%
TTCACGGAAAATACACTCAC+TGG - chr5_3:1428514-1428533 Msa0790580:intron 40.0%
AACCCATGGGTGTATATTTC+TGG - chr5_3:1428556-1428575 Msa0790580:intron 40.0%
GTCCAGAAATATACACCCAT+GGG + chr5_3:1428561-1428580 None:intergenic 40.0%
TGCTATAAACTAAGCCAGTG+GGG + chr5_3:1428594-1428613 None:intergenic 40.0%
GTTGCTATAAACTAAGCCAG+TGG + chr5_3:1428596-1428615 None:intergenic 40.0%
TTGAGTACCTGTGCTAGATT+TGG - chr5_3:1428634-1428653 Msa0790580:intron 40.0%
TGATACTTCATCCTCTGGTT+TGG - chr5_3:1428672-1428691 Msa0790580:intron 40.0%
ACTGTCAAATTCCAAACCAG+AGG + chr5_3:1428686-1428705 None:intergenic 40.0%
TGGAATTTGACAGTAAAGGC+TGG - chr5_3:1428692-1428711 Msa0790580:intron 40.0%
GGAATTTGACAGTAAAGGCT+GGG - chr5_3:1428693-1428712 Msa0790580:intron 40.0%
GAATTTGACAGTAAAGGCTG+GGG - chr5_3:1428694-1428713 Msa0790580:intron 40.0%
CTCAATGGTGTTCTCAGATT+TGG - chr5_3:1428811-1428830 Msa0790580:intron 40.0%
ATATGCTGCAAAGAAGTTGC+TGG - chr5_3:1428915-1428934 Msa0790580:CDS 40.0%
AAGTAGATCCAAGTGCTTGA+AGG - chr5_3:1429002-1429021 Msa0790580:CDS 40.0%
AATTACCTCCTTCAAGCACT+TGG + chr5_3:1429013-1429032 None:intergenic 40.0%
AGCTCGACGACTCAAATATT+AGG - chr5_3:1429300-1429319 Msa0790580:CDS 40.0%
TATGCATCAATAGTGGCTCT+TGG - chr5_3:1429348-1429367 Msa0790580:intron 40.0%
CTGGAATTCCTGGATATTGT+CGG - chr5_3:1429372-1429391 Msa0790580:intron 40.0%
TCATTCATGGTGTGAGGTTT+AGG - chr5_3:1429706-1429725 Msa0790580:five_prime_UTR 40.0%
! AACGCTTCTGAAGGAGAGAA+AGG + chr5_3:1419598-1419617 None:intergenic 45.0%
!! AGTCTGAAAGCATTGATCGC+AGG + chr5_3:1419636-1419655 None:intergenic 45.0%
! GCATTTTTCTCCCTGAAGAC+TGG - chr5_3:1419814-1419833 Msa0790580:CDS 45.0%
AAGTGAAGGACCAGTCTTCA+GGG + chr5_3:1419827-1419846 None:intergenic 45.0%
AAAGTGAAGGACCAGTCTTC+AGG + chr5_3:1419828-1419847 None:intergenic 45.0%
! ACACCCTGACTCCATTTTCA+AGG - chr5_3:1419866-1419885 Msa0790580:CDS 45.0%
CTGTCCTTGAAAATGGAGTC+AGG + chr5_3:1419873-1419892 None:intergenic 45.0%
!! TTGTGTGTAGGGTTTTGTGG+AGG - chr5_3:1421447-1421466 Msa0790580:intron 45.0%
! GTTTTGTGGAGGACCAGTTT+GGG - chr5_3:1421458-1421477 Msa0790580:intron 45.0%
ATTGCAAGGGCAGTAGAAGA+AGG - chr5_3:1421490-1421509 Msa0790580:intron 45.0%
TTGCAAGGGCAGTAGAAGAA+GGG - chr5_3:1421491-1421510 Msa0790580:intron 45.0%
! CTTTTGCAAACACCTTGTCC+TGG + chr5_3:1421568-1421587 None:intergenic 45.0%
GAGATCAGCCTATTTGTGCA+CGG - chr5_3:1421803-1421822 Msa0790580:intron 45.0%
TATTTGTGCACGGACAGCTT+GGG - chr5_3:1421813-1421832 Msa0790580:intron 45.0%
TCAACTTCGTCAACCTAACC+AGG - chr5_3:1421888-1421907 Msa0790580:intron 45.0%
TCAAGAGATCAGCAGTTCTC+TGG - chr5_3:1422034-1422053 Msa0790580:intron 45.0%
ATGGGTGGCACAATGTCATT+AGG - chr5_3:1422538-1422557 Msa0790580:intron 45.0%
!! GCTTGGGTTAGTAAGAGTCA+GGG - chr5_3:1422622-1422641 Msa0790580:intron 45.0%
!! AGTCAGGGAGTACATTTTGG+AGG - chr5_3:1422637-1422656 Msa0790580:intron 45.0%
! TTTAGGGTGTGTTTGGATGG+AGG - chr5_3:1422762-1422781 Msa0790580:intron 45.0%
TTAGGGTGTGTTTGGATGGA+GGG - chr5_3:1422763-1422782 Msa0790580:intron 45.0%
TGTGTTTGGATGGAGGGTTT+AGG - chr5_3:1422769-1422788 Msa0790580:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG - chr5_3:1422773-1422792 Msa0790580:intron 45.0%
TTGAGGGTTTAGAAGGGGAA+GGG + chr5_3:1422976-1422995 None:intergenic 45.0%
ATTGAGGGTTTAGAAGGGGA+AGG + chr5_3:1422977-1422996 None:intergenic 45.0%
!! GGAAGCATCTATAGTCTACC+AGG + chr5_3:1423450-1423469 None:intergenic 45.0%
CCATCATGCATTTGAATGGC+GGG - chr5_3:1423489-1423508 Msa0790580:intron 45.0%
TCAATAGCCGCATTCCTTGA+AGG + chr5_3:1423823-1423842 None:intergenic 45.0%
TCATCAACAATTGCAAGCCG+AGG + chr5_3:1423868-1423887 None:intergenic 45.0%
CAAAGATGTTAACCACTGCC+TGG + chr5_3:1423911-1423930 None:intergenic 45.0%
CAGGCAGTGGTTAACATCTT+TGG - chr5_3:1423909-1423928 Msa0790580:intron 45.0%
AGGTATGAATGTCATGGCAG+TGG - chr5_3:1423938-1423957 Msa0790580:intron 45.0%
ACATAGGTCCTTGTGATTGG+AGG - chr5_3:1424089-1424108 Msa0790580:CDS 45.0%
CCACCTAATGGGAAAAGACT+TGG + chr5_3:1424231-1424250 None:intergenic 45.0%
! CCAAGTCTTTTCCCATTAGG+TGG - chr5_3:1424228-1424247 Msa0790580:CDS 45.0%
GGGATACGGAAGAAAACTAC+AGG + chr5_3:1424354-1424373 None:intergenic 45.0%
! AATTTAAGGCAGGGGGGATA+CGG + chr5_3:1424368-1424387 None:intergenic 45.0%
CGATTAAACCAGATAGAGGG+TGG + chr5_3:1424402-1424421 None:intergenic 45.0%
AGTTGCAATTGGAGACTGGT+TGG - chr5_3:1424526-1424545 Msa0790580:intron 45.0%
! CAATTGGAGACTGGTTGGTT+GGG - chr5_3:1424531-1424550 Msa0790580:intron 45.0%
TCCAGCAATCCTCAAAACAG+GGG + chr5_3:1424644-1424663 None:intergenic 45.0%
CTTCCAGCAATCCTCAAAAC+AGG + chr5_3:1424646-1424665 None:intergenic 45.0%
CATTAAGTCTGATTGCCGAG+GGG + chr5_3:1424822-1424841 None:intergenic 45.0%
GAAATTGAAGCCTCAAGTGG+TGG - chr5_3:1424856-1424875 Msa0790580:intron 45.0%
CATCTCGCGTTGTATCTAAG+AGG + chr5_3:1424931-1424950 None:intergenic 45.0%
TTCAGGACTCCATTTGATCC+TGG + chr5_3:1425007-1425026 None:intergenic 45.0%
! GGAGTCCTGAAGTATCTTTC+AGG - chr5_3:1425016-1425035 Msa0790580:intron 45.0%
GCAAATAATTGCCGCATGAG+AGG + chr5_3:1425053-1425072 None:intergenic 45.0%
!! TTGCGGACTGGTAAAGAACA+AGG - chr5_3:1425069-1425088 Msa0790580:intron 45.0%
! GCTGACTTAGACTGTATGGT+AGG - chr5_3:1425115-1425134 Msa0790580:intron 45.0%
TGTATGGTAGGCTTCTGTTC+TGG - chr5_3:1425127-1425146 Msa0790580:intron 45.0%
CTCCGTATATATCTGGACCA+CGG - chr5_3:1425486-1425505 Msa0790580:intron 45.0%
! TGTGTGAATTTGGAAGGCAC+GGG + chr5_3:1425591-1425610 None:intergenic 45.0%
GTGCCTTCCAAATTCACACA+AGG - chr5_3:1425591-1425610 Msa0790580:intron 45.0%
CCCTAACCTCCTGTAATAAC+TGG + chr5_3:1425663-1425682 None:intergenic 45.0%
! CAGTCTGTTTGGTTCACTGT+TGG + chr5_3:1425697-1425716 None:intergenic 45.0%
CAACCAGGTAAATGCACTGT+TGG - chr5_3:1425878-1425897 Msa0790580:intron 45.0%
TTAAACAGTTCCCTCGAGCT+AGG + chr5_3:1425987-1426006 None:intergenic 45.0%
CGACTTCACAGGTTCCTATA+TGG + chr5_3:1426012-1426031 None:intergenic 45.0%
TCAGGAGAAGTCCTTTACCA+TGG + chr5_3:1426040-1426059 None:intergenic 45.0%
CTATTGCAGACATCTGACAC+TGG + chr5_3:1426149-1426168 None:intergenic 45.0%
TTGCATAATCCTTAGCCACC+AGG - chr5_3:1426252-1426271 Msa0790580:intron 45.0%
TGCATAATCCTTAGCCACCA+GGG - chr5_3:1426253-1426272 Msa0790580:intron 45.0%
! ATGGTGAAGGTTGGTCCTAA+TGG + chr5_3:1426302-1426321 None:intergenic 45.0%
AAGAGACCTTGGAGCTAAGT+GGG - chr5_3:1426370-1426389 Msa0790580:intron 45.0%
CTCCTGATCTTGACAAACTC+TGG + chr5_3:1426529-1426548 None:intergenic 45.0%
CAAGATCAGGAGAGTGATTG+TGG - chr5_3:1426537-1426556 Msa0790580:intron 45.0%
ACCATGAAGGAGAGTTTGAG+TGG - chr5_3:1426669-1426688 Msa0790580:intron 45.0%
ACCACTCAAACTCTCCTTCA+TGG + chr5_3:1426673-1426692 None:intergenic 45.0%
GAAACACGCAGTCACTTATG+CGG + chr5_3:1427063-1427082 None:intergenic 45.0%
!! GCGATGTTGCTTTGCAAGAT+CGG + chr5_3:1427282-1427301 None:intergenic 45.0%
AGGGACATCCAAGCTCATAA+AGG - chr5_3:1427365-1427384 Msa0790580:CDS 45.0%
TGACAGGATCAGGGATAAGT+TGG - chr5_3:1427413-1427432 Msa0790580:intron 45.0%
GCTACTGTCATGTGAATTGG+AGG + chr5_3:1427513-1427532 None:intergenic 45.0%
GGAGCTACTGTCATGTGAAT+TGG + chr5_3:1427516-1427535 None:intergenic 45.0%
TTCTAGTCGTTGACCCAAAC+AGG + chr5_3:1427652-1427671 None:intergenic 45.0%
ATGCTGAGCTAGCAATTGAC+GGG - chr5_3:1428128-1428147 Msa0790580:intron 45.0%
GCAATTGACGGGGTAGATAA+TGG - chr5_3:1428139-1428158 Msa0790580:intron 45.0%
TAATGGTTCCCTGATCCACA+TGG - chr5_3:1428156-1428175 Msa0790580:intron 45.0%
GATCAACATCCATGTGGATC+AGG + chr5_3:1428168-1428187 None:intergenic 45.0%
! TTTTCCAACGGATACCAGCA+CGG - chr5_3:1428315-1428334 Msa0790580:intron 45.0%
TGATCCAGCTGGAAAACAGA+GGG + chr5_3:1428413-1428432 None:intergenic 45.0%
TTGATCCAGCTGGAAAACAG+AGG + chr5_3:1428414-1428433 None:intergenic 45.0%
TAGTTCCCATTTGATCCAGC+TGG + chr5_3:1428424-1428443 None:intergenic 45.0%
CGTGAACTTAAAACCTACGC+TGG + chr5_3:1428500-1428519 None:intergenic 45.0%
AATACACTCACTGGAGTCCT+TGG - chr5_3:1428523-1428542 Msa0790580:intron 45.0%
! ATGGGTTTTTCACAGTGCCA+AGG + chr5_3:1428543-1428562 None:intergenic 45.0%
TTGGCACTGTGAAAAACCCA+TGG - chr5_3:1428542-1428561 Msa0790580:intron 45.0%
TGGCACTGTGAAAAACCCAT+GGG - chr5_3:1428543-1428562 Msa0790580:intron 45.0%
GGTCCAGAAATATACACCCA+TGG + chr5_3:1428562-1428581 None:intergenic 45.0%
TCTTGCACCAAATCTAGCAC+AGG + chr5_3:1428644-1428663 None:intergenic 45.0%
AGCAGAGACACAGAGAATGA+TGG + chr5_3:1428769-1428788 None:intergenic 45.0%
TCATTCTCTGTGTCTCTGCT+CGG - chr5_3:1428769-1428788 Msa0790580:intron 45.0%
ATGTGTCAACCAAACCCAAC+TGG + chr5_3:1428852-1428871 None:intergenic 45.0%
TAGATCCAAGTGCTTGAAGG+AGG - chr5_3:1429005-1429024 Msa0790580:CDS 45.0%
!! TTTTGGGGGAATACTTCCCT+AGG - chr5_3:1429130-1429149 Msa0790580:intron 45.0%
! TTTGAGATAGGCGGAAGGTT+TGG + chr5_3:1429213-1429232 None:intergenic 45.0%
!!! GTCTTTTTGAGATAGGCGGA+AGG + chr5_3:1429218-1429237 None:intergenic 45.0%
TCAAAAGGTGAAGTCAGCCA+AGG - chr5_3:1429257-1429276 Msa0790580:CDS 45.0%
TTTCCACAGTGGCATTTCCT+TGG + chr5_3:1429277-1429296 None:intergenic 45.0%
!! GTCGAGCTTTATTTCCACAG+TGG + chr5_3:1429288-1429307 None:intergenic 45.0%
TAAACCTGTGGCTTCGAGAA+TGG + chr5_3:1429330-1429349 None:intergenic 45.0%
ATCAATAGTGGCTCTTGGAC+TGG - chr5_3:1429353-1429372 Msa0790580:intron 45.0%
CGATAGACCGTGTTAACAAG+AGG + chr5_3:1429576-1429595 None:intergenic 45.0%
CCTGTCCTACAGATAGTACT+AGG + chr5_3:1429752-1429771 None:intergenic 45.0%
CCTAGTACTATCTGTAGGAC+AGG - chr5_3:1429749-1429768 Msa0790580:five_prime_UTR 45.0%
!!! AATTTTTTATTAAAACAAAT+GGG - chr5_3:1420863-1420882 Msa0790580:CDS 5.0%
TGCAGGAACTCATCCACTGT+CGG + chr5_3:1419479-1419498 None:intergenic 50.0%
CAATGATCTGAGTGCGGCAT+AGG + chr5_3:1419528-1419547 None:intergenic 50.0%
CTCCAGCAATGATCTGAGTG+CGG + chr5_3:1419534-1419553 None:intergenic 50.0%
GCACTCAGATCATTGCTGGA+GGG - chr5_3:1419533-1419552 Msa0790580:three_prime_UTR 50.0%
ATCATTGCTGGAGGGTCTTG+AGG - chr5_3:1419541-1419560 Msa0790580:three_prime_UTR 50.0%
AGAAAGGAAGATCCGAGCCT+GGG + chr5_3:1419582-1419601 None:intergenic 50.0%
CCACTTCTCAGCTATGGCAA+TGG + chr5_3:1419934-1419953 None:intergenic 50.0%
CCATTGCCATAGCTGAGAAG+TGG - chr5_3:1419931-1419950 Msa0790580:CDS 50.0%
AGGTAGCCACTTCTCAGCTA+TGG + chr5_3:1419940-1419959 None:intergenic 50.0%
TGAGAAGTGGCTACCTTCCA+AGG - chr5_3:1419944-1419963 Msa0790580:intron 50.0%
CAAGACCGACTGGTGAAGAA+GGG + chr5_3:1421335-1421354 None:intergenic 50.0%
TCAAAACTGCCAAGACCGAC+TGG + chr5_3:1421345-1421364 None:intergenic 50.0%
!! GGTTTTGTGGAGGACCAGTT+TGG - chr5_3:1421457-1421476 Msa0790580:intron 50.0%
TTTAATATGGGAGGTCGCCC+AGG - chr5_3:1421547-1421566 Msa0790580:intron 50.0%
! TGAGATGTACTGGTACAGGC+TGG - chr5_3:1421703-1421722 Msa0790580:intron 50.0%
CAAGCTGTCCGTGCACAAAT+AGG + chr5_3:1421814-1421833 None:intergenic 50.0%
CTATTTGTGCACGGACAGCT+TGG - chr5_3:1421812-1421831 Msa0790580:intron 50.0%
GCTTGGGCTTATGGAAAGTC+TGG - chr5_3:1421829-1421848 Msa0790580:intron 50.0%
TGGGCTTATGGAAAGTCTGG+TGG - chr5_3:1421832-1421851 Msa0790580:intron 50.0%
CTTCGTCAACCTAACCAGGT+CGG - chr5_3:1421892-1421911 Msa0790580:intron 50.0%
!! GTTTTGGTGAACAACCGACC+TGG + chr5_3:1421909-1421928 None:intergenic 50.0%
TTTCCATATGAACCACCGGC+TGG - chr5_3:1422143-1422162 Msa0790580:intron 50.0%
CACTGGCAGTGAGTGGAATA+TGG + chr5_3:1422217-1422236 None:intergenic 50.0%
CTTCTTACACTGGCAGTGAG+TGG + chr5_3:1422224-1422243 None:intergenic 50.0%
!! GCGCTGGTTTCTTCTTACAC+TGG + chr5_3:1422234-1422253 None:intergenic 50.0%
!! GGCTTGGGTTAGTAAGAGTC+AGG - chr5_3:1422621-1422640 Msa0790580:intron 50.0%
GTTTGGATGGAGGGTTTAGG+AGG - chr5_3:1422772-1422791 Msa0790580:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG - chr5_3:1422774-1422793 Msa0790580:intron 50.0%
GTTCTGCCATTCAACAGCTG+AGG + chr5_3:1423052-1423071 None:intergenic 50.0%
CCCGCCATTCAAATGCATGA+TGG + chr5_3:1423492-1423511 None:intergenic 50.0%
CTCTTCGCTTGTTCTCACCT+CGG - chr5_3:1423848-1423867 Msa0790580:CDS 50.0%
ATGTTAACCACTGCCTGGGT+AGG + chr5_3:1423906-1423925 None:intergenic 50.0%
GTAGTAGGCCTCCAATCACA+AGG + chr5_3:1424100-1424119 None:intergenic 50.0%
TGCAGGTGATCCCACCTAAT+GGG + chr5_3:1424242-1424261 None:intergenic 50.0%
ATGCAGGTGATCCCACCTAA+TGG + chr5_3:1424243-1424262 None:intergenic 50.0%
ATTAGGTGGGATCACCTGCA+TGG - chr5_3:1424242-1424261 Msa0790580:CDS 50.0%
!! ATGGAACTGAAGCGCTGGTA+AGG + chr5_3:1424425-1424444 None:intergenic 50.0%
GTTGTATGGAACTGAAGCGC+TGG + chr5_3:1424430-1424449 None:intergenic 50.0%
! GCAATTGGAGACTGGTTGGT+TGG - chr5_3:1424530-1424549 Msa0790580:intron 50.0%
!!! TCCCCTGTTTTGAGGATTGC+TGG - chr5_3:1424640-1424659 Msa0790580:intron 50.0%
ATTCCAGTCACCACCACTTG+AGG + chr5_3:1424869-1424888 None:intergenic 50.0%
TTTGAGCTATCCAGCCTTCC+AGG - chr5_3:1424986-1425005 Msa0790580:intron 50.0%
TCCAGCCTTCCAGGATCAAA+TGG - chr5_3:1424995-1425014 Msa0790580:intron 50.0%
TCCATTTGATCCTGGAAGGC+TGG + chr5_3:1424999-1425018 None:intergenic 50.0%
GGACTCCATTTGATCCTGGA+AGG + chr5_3:1425003-1425022 None:intergenic 50.0%
AAGTCCTCTACCCTCTCATG+CGG - chr5_3:1425039-1425058 Msa0790580:intron 50.0%
TGCGGCAATTATTTGCGGAC+TGG - chr5_3:1425057-1425076 Msa0790580:intron 50.0%
GCTGAAAAGCAAGAAGCTCG+TGG + chr5_3:1425337-1425356 None:intergenic 50.0%
!! CGAGCTTCTTGCTTTTCAGC+TGG - chr5_3:1425337-1425356 Msa0790580:intron 50.0%
GCACGGGATAACAGGGAATT+AGG + chr5_3:1425575-1425594 None:intergenic 50.0%
! TTGGAAGGCACGGGATAACA+GGG + chr5_3:1425582-1425601 None:intergenic 50.0%
! TTTGGAAGGCACGGGATAAC+AGG + chr5_3:1425583-1425602 None:intergenic 50.0%
AGCCCAACAGTGCATTTACC+TGG + chr5_3:1425884-1425903 None:intergenic 50.0%
AATCGACCAAACCTAGCTCG+AGG - chr5_3:1425973-1425992 Msa0790580:intron 50.0%
ATCGACCAAACCTAGCTCGA+GGG - chr5_3:1425974-1425993 Msa0790580:intron 50.0%
!! CCATGGTTTGTCGACTTCAC+AGG + chr5_3:1426023-1426042 None:intergenic 50.0%
CCTGTGAAGTCGACAAACCA+TGG - chr5_3:1426020-1426039 Msa0790580:intron 50.0%
ACAAAGGCCATTCTGGCAAC+AGG - chr5_3:1426199-1426218 Msa0790580:intron 50.0%
GCATAATCCTTAGCCACCAG+GGG - chr5_3:1426254-1426273 Msa0790580:intron 50.0%
! TGATTGACTTAAGGCTCCCC+TGG + chr5_3:1426273-1426292 None:intergenic 50.0%
GAAGAGACCTTGGAGCTAAG+TGG - chr5_3:1426369-1426388 Msa0790580:intron 50.0%
GCCCAGAGTTTGTCAAGATC+AGG - chr5_3:1426524-1426543 Msa0790580:intron 50.0%
TCAGGATGGATCATGGGGTA+GGG + chr5_3:1427256-1427275 None:intergenic 50.0%
TTCAGGATGGATCATGGGGT+AGG + chr5_3:1427257-1427276 None:intergenic 50.0%
GGACTTCAGGATGGATCATG+GGG + chr5_3:1427261-1427280 None:intergenic 50.0%
CGGACTTCAGGATGGATCAT+GGG + chr5_3:1427262-1427281 None:intergenic 50.0%
TCGGACTTCAGGATGGATCA+TGG + chr5_3:1427263-1427282 None:intergenic 50.0%
TGCAAGATCGGACTTCAGGA+TGG + chr5_3:1427270-1427289 None:intergenic 50.0%
GCTTTGCAAGATCGGACTTC+AGG + chr5_3:1427274-1427293 None:intergenic 50.0%
! GAAGAGGGGCTTTAGTGCAA+AGG + chr5_3:1427898-1427917 None:intergenic 50.0%
TGCTGAGCTAGCAATTGACG+GGG - chr5_3:1428129-1428148 Msa0790580:intron 50.0%
ATAGCAGCCTTGACAGGAGA+TGG + chr5_3:1428208-1428227 None:intergenic 50.0%
AAACCTACGCTGGCATCAGT+AGG + chr5_3:1428490-1428509 None:intergenic 50.0%
! AAGCCAGTGGGGTTGATTGT+AGG + chr5_3:1428583-1428602 None:intergenic 50.0%
TTTGACAGTAAAGGCTGGGG+TGG - chr5_3:1428697-1428716 Msa0790580:intron 50.0%
! GTGTGCTGGCATTTCTGTTG+TGG - chr5_3:1429187-1429206 Msa0790580:CDS 50.0%
AATGCCATTCTCGAAGCCAC+AGG - chr5_3:1429323-1429342 Msa0790580:intron 50.0%
CAGATTGCGAGCACTTCTGC+AGG + chr5_3:1419496-1419515 None:intergenic 55.0%
!! CTGCAGAAGTGCTCGCAATC+TGG - chr5_3:1419494-1419513 Msa0790580:three_prime_UTR 55.0%
TGCCGCACTCAGATCATTGC+TGG - chr5_3:1419529-1419548 Msa0790580:three_prime_UTR 55.0%
CGCACTCAGATCATTGCTGG+AGG - chr5_3:1419532-1419551 Msa0790580:three_prime_UTR 55.0%
GAGAAAGGAAGATCCGAGCC+TGG + chr5_3:1419583-1419602 None:intergenic 55.0%
TGGTGGGGAAACGCTTCTGA+AGG + chr5_3:1419607-1419626 None:intergenic 55.0%
!! TCAGAAGCGTTTCCCCACCA+AGG - chr5_3:1419607-1419626 Msa0790580:three_prime_UTR 55.0%
TGATCGCAGGAGTCCTTGGT+GGG + chr5_3:1419623-1419642 None:intergenic 55.0%
TTGATCGCAGGAGTCCTTGG+TGG + chr5_3:1419624-1419643 None:intergenic 55.0%
! GCATTGATCGCAGGAGTCCT+TGG + chr5_3:1419627-1419646 None:intergenic 55.0%
! CATTGCATTGCAGGGCACCA+AGG - chr5_3:1419759-1419778 Msa0790580:CDS 55.0%
CGGACAACCCATCTATGACG+AGG - chr5_3:1420123-1420142 Msa0790580:CDS 55.0%
CCAAGACCGACTGGTGAAGA+AGG + chr5_3:1421336-1421355 None:intergenic 55.0%
CCTTCTTCACCAGTCGGTCT+TGG - chr5_3:1421333-1421352 Msa0790580:intron 55.0%
! GTGGAGGACCAGTTTGGGTT+AGG - chr5_3:1421463-1421482 Msa0790580:intron 55.0%
GGTGAACAACCGACCTGGTT+AGG + chr5_3:1421904-1421923 None:intergenic 55.0%
CTTCCAGCCGGTGGTTCATA+TGG + chr5_3:1422149-1422168 None:intergenic 55.0%
CGCTTCCGCAATCTCATTGC+TGG - chr5_3:1422173-1422192 Msa0790580:intron 55.0%
ATGGAGGGTTTAGGAGGGGA+AGG - chr5_3:1422778-1422797 Msa0790580:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG - chr5_3:1422779-1422798 Msa0790580:intron 55.0%
GGTTTAGAAGGGGAAGGGAG+GGG + chr5_3:1422971-1422990 None:intergenic 55.0%
GGGTTTAGAAGGGGAAGGGA+GGG + chr5_3:1422972-1422991 None:intergenic 55.0%
AGGGTTTAGAAGGGGAAGGG+AGG + chr5_3:1422973-1422992 None:intergenic 55.0%
! ATCTGACTCGACACCTACCC+AGG - chr5_3:1423890-1423909 Msa0790580:intron 55.0%
CTACTGGACCACCCTCTATC+TGG - chr5_3:1424391-1424410 Msa0790580:intron 55.0%
! AAGCCTCAAGTGGTGGTGAC+TGG - chr5_3:1424863-1424882 Msa0790580:intron 55.0%
ATTGCCGCATGAGAGGGTAG+AGG + chr5_3:1425046-1425065 None:intergenic 55.0%
!! TTGCTTTTCAGCTGGCCTGC+CGG - chr5_3:1425345-1425364 Msa0790580:intron 55.0%
ACAGGCAGACAGACCTCAGA+AGG + chr5_3:1425377-1425396 None:intergenic 55.0%
CAGTTCCCTCGAGCTAGGTT+TGG + chr5_3:1425982-1426001 None:intergenic 55.0%
TTGACTTAAGGCTCCCCTGG+TGG + chr5_3:1426270-1426289 None:intergenic 55.0%
GAGTGACCCACTTAGCTCCA+AGG + chr5_3:1426379-1426398 None:intergenic 55.0%
ATGGGGTAGGGTGCGTCTAA+TGG + chr5_3:1427244-1427263 None:intergenic 55.0%
GCCTGTTCCATCTCCTGTCA+AGG - chr5_3:1428198-1428217 Msa0790580:intron 55.0%
GCCTTGACAGGAGATGGAAC+AGG + chr5_3:1428202-1428221 None:intergenic 55.0%
! AACTCCGTGCTGGTATCCGT+TGG + chr5_3:1428322-1428341 None:intergenic 55.0%
GTTCCTACTGATGCCAGCGT+AGG - chr5_3:1428484-1428503 Msa0790580:intron 55.0%
GGACCTACAATCAACCCCAC+TGG - chr5_3:1428577-1428596 Msa0790580:intron 55.0%
TTCTCTGTGTCTCTGCTCGG+AGG - chr5_3:1428772-1428791 Msa0790580:intron 55.0%
GTTGCTGGAGCTTAGAGAGC+AGG - chr5_3:1428930-1428949 Msa0790580:CDS 55.0%
CCGCTCTTCTCAAGTGCCTA+GGG + chr5_3:1429149-1429168 None:intergenic 55.0%
CCCTAGGCACTTGAGAAGAG+CGG - chr5_3:1429146-1429165 Msa0790580:CDS 55.0%
ACCGCTCTTCTCAAGTGCCT+AGG + chr5_3:1429150-1429169 None:intergenic 55.0%
AGGCACTTGAGAAGAGCGGT+TGG - chr5_3:1429150-1429169 Msa0790580:CDS 55.0%
GGCACTTGAGAAGAGCGGTT+GGG - chr5_3:1429151-1429170 Msa0790580:CDS 55.0%
GACGTGCTTGAATCGTGTGC+TGG - chr5_3:1429173-1429192 Msa0790580:CDS 55.0%
CAGCCAAGGAAATGCCACTG+TGG - chr5_3:1429271-1429290 Msa0790580:CDS 55.0%
! GGCTCTTGGACTGGAATTCC+TGG - chr5_3:1429362-1429381 Msa0790580:intron 55.0%
GCTGGAGGGTCTTGAGGATC+TGG - chr5_3:1419547-1419566 Msa0790580:three_prime_UTR 60.0%
GGATCTGGAAACCCGTTCCC+AGG - chr5_3:1419562-1419581 Msa0790580:three_prime_UTR 60.0%
TGGAAACCCGTTCCCAGGCT+CGG - chr5_3:1419567-1419586 Msa0790580:three_prime_UTR 60.0%
GAAGATCCGAGCCTGGGAAC+GGG + chr5_3:1419576-1419595 None:intergenic 60.0%
GGAAGATCCGAGCCTGGGAA+CGG + chr5_3:1419577-1419596 None:intergenic 60.0%
GATCGCAGGAGTCCTTGGTG+GGG + chr5_3:1419622-1419641 None:intergenic 60.0%
GCACGGACAGCTTGGGCTTA+TGG - chr5_3:1421820-1421839 Msa0790580:intron 60.0%
AAGCGTTTGCTTCCAGCCGG+TGG + chr5_3:1422158-1422177 None:intergenic 60.0%
!! CGGAAGCGTTTGCTTCCAGC+CGG + chr5_3:1422161-1422180 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG - chr5_3:1422782-1422801 Msa0790580:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG - chr5_3:1422783-1422802 Msa0790580:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG - chr5_3:1422784-1422803 Msa0790580:intron 60.0%
TAGAAGGGGAAGGGAGGGGA+GGG + chr5_3:1422967-1422986 None:intergenic 60.0%
TTAGAAGGGGAAGGGAGGGG+AGG + chr5_3:1422968-1422987 None:intergenic 60.0%
! AGACCTCAGAAGGTGCACGC+CGG + chr5_3:1425367-1425386 None:intergenic 60.0%
TAAGGCTCCCCTGGTGGCTA+AGG + chr5_3:1426264-1426283 None:intergenic 60.0%
! GGCACCCTCTGTTTTCCAGC+TGG - chr5_3:1428406-1428425 Msa0790580:intron 60.0%
ACAGTAAAGGCTGGGGTGGC+TGG - chr5_3:1428701-1428720 Msa0790580:intron 60.0%
CAGTAAAGGCTGGGGTGGCT+GGG - chr5_3:1428702-1428721 Msa0790580:intron 60.0%
ATGGGAGGTCGCCCAGGACA+AGG - chr5_3:1421553-1421572 Msa0790580:intron 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG - chr5_3:1422787-1422806 Msa0790580:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG - chr5_3:1422788-1422807 Msa0790580:intron 65.0%
CTCGACACCTACCCAGGCAG+TGG - chr5_3:1423896-1423915 Msa0790580:intron 65.0%
AGGCTGGGGTGGCTGGGATT+TGG - chr5_3:1428708-1428727 Msa0790580:intron 65.0%
CTGGGGTGGCTGGGATTTGG+AGG - chr5_3:1428711-1428730 Msa0790580:intron 65.0%
GGGTTGGACGACGCCGACAG+TGG - chr5_3:1419463-1419482 Msa0790580:three_prime_UTR 70.0%
! CTCAGAAGGTGCACGCCGGC+AGG + chr5_3:1425363-1425382 None:intergenic 70.0%
CTGCCGGCGTGCACCTTCTG+AGG - chr5_3:1425361-1425380 Msa0790580:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 1419258 1429845 1419258 ID=Msa0790580;Name=Msa0790580
chr5_3 mRNA 1419258 1429845 1419258 ID=Msa0790580-mRNA-1;Parent=Msa0790580;Name=Msa0790580-mRNA-1;_AED=0.03;_eAED=0.03;_QI=203|0.90|0.83|1|0.90|0.83|12|370|1098
chr5_3 exon 1419258 1419951 1419258 ID=Msa0790580-mRNA-1:exon:536;Parent=Msa0790580-mRNA-1
chr5_3 exon 1420077 1421045 1420077 ID=Msa0790580-mRNA-1:exon:535;Parent=Msa0790580-mRNA-1
chr5_3 exon 1423721 1423900 1423721 ID=Msa0790580-mRNA-1:exon:534;Parent=Msa0790580-mRNA-1
chr5_3 exon 1424013 1424333 1424013 ID=Msa0790580-mRNA-1:exon:533;Parent=Msa0790580-mRNA-1
chr5_3 exon 1425164 1425298 1425164 ID=Msa0790580-mRNA-1:exon:532;Parent=Msa0790580-mRNA-1
chr5_3 exon 1426868 1427104 1426868 ID=Msa0790580-mRNA-1:exon:531;Parent=Msa0790580-mRNA-1
chr5_3 exon 1427194 1427396 1427194 ID=Msa0790580-mRNA-1:exon:530;Parent=Msa0790580-mRNA-1
chr5_3 exon 1427454 1427646 1427454 ID=Msa0790580-mRNA-1:exon:529;Parent=Msa0790580-mRNA-1
chr5_3 exon 1427928 1428023 1427928 ID=Msa0790580-mRNA-1:exon:528;Parent=Msa0790580-mRNA-1
chr5_3 exon 1428851 1429057 1428851 ID=Msa0790580-mRNA-1:exon:527;Parent=Msa0790580-mRNA-1
chr5_3 exon 1429138 1429331 1429138 ID=Msa0790580-mRNA-1:exon:526;Parent=Msa0790580-mRNA-1
chr5_3 exon 1429405 1429845 1429405 ID=Msa0790580-mRNA-1:exon:525;Parent=Msa0790580-mRNA-1
chr5_3 five_prime_UTR 1429643 1429845 1429643 ID=Msa0790580-mRNA-1:five_prime_utr;Parent=Msa0790580-mRNA-1
chr5_3 CDS 1429405 1429642 1429405 ID=Msa0790580-mRNA-1:cds;Parent=Msa0790580-mRNA-1
chr5_3 CDS 1429138 1429331 1429138 ID=Msa0790580-mRNA-1:cds;Parent=Msa0790580-mRNA-1
chr5_3 CDS 1428851 1429057 1428851 ID=Msa0790580-mRNA-1:cds;Parent=Msa0790580-mRNA-1
chr5_3 CDS 1427928 1428023 1427928 ID=Msa0790580-mRNA-1:cds;Parent=Msa0790580-mRNA-1
chr5_3 CDS 1427454 1427646 1427454 ID=Msa0790580-mRNA-1:cds;Parent=Msa0790580-mRNA-1
chr5_3 CDS 1427194 1427396 1427194 ID=Msa0790580-mRNA-1:cds;Parent=Msa0790580-mRNA-1
chr5_3 CDS 1426868 1427104 1426868 ID=Msa0790580-mRNA-1:cds;Parent=Msa0790580-mRNA-1
chr5_3 CDS 1425164 1425298 1425164 ID=Msa0790580-mRNA-1:cds;Parent=Msa0790580-mRNA-1
chr5_3 CDS 1424013 1424333 1424013 ID=Msa0790580-mRNA-1:cds;Parent=Msa0790580-mRNA-1
chr5_3 CDS 1423721 1423900 1423721 ID=Msa0790580-mRNA-1:cds;Parent=Msa0790580-mRNA-1
chr5_3 CDS 1420077 1421045 1420077 ID=Msa0790580-mRNA-1:cds;Parent=Msa0790580-mRNA-1
chr5_3 CDS 1419628 1419951 1419628 ID=Msa0790580-mRNA-1:cds;Parent=Msa0790580-mRNA-1
chr5_3 three_prime_UTR 1419258 1419627 1419258 ID=Msa0790580-mRNA-1:three_prime_utr;Parent=Msa0790580-mRNA-1
Gene Sequence

>Msa0790580

ATGGGTTGGACGACGCCGACAGTGGATGAGTTCCTGCAGAAGTGCTCGCAATCTGGCGACGCTGCCTATGCCGCACTCAGATCATTGCTGGAGGGTCTTGAGGATCTGGAAACCCGTTCCCAGGCTCGGATCTTCCTTTCTCTCCTTCAGAAGCGTTTCCCCACCAAGGACTCCTGCGATCAATGCTTTCAGACTTACCATTTTCGTATTGAAGACATCTTATTGGATCAATACGAGGGGCACCAAGGTAGAAATAAATTGACTATGATGGTGATTCCTAGCATTTTTCTCCCTGAAGACTGGTCCTTCACTTTTTATGAAGGGATTAATAGACACCCTGACTCCATTTTCAAGGACAGAATTGTTTCTGAGTTAGGTTGTGGAAATGGATGGATATCCATTGCCATAGCTGAGAAGTGGCTACCTTCCAAGGTCTATGGCCTTGATATCAATCCTAGAGCTGTCAAAATTTCCTGGATAAACCTATACTTGAATGCTTTAGATGAAAACGGACAACCCATCTATGACGAGGAGAAGAAAACTTTGTTGGACAGGGTAGAGTTTCACGAATCTGATCTTCTATCCTATTGCAGAGATAATGGAATTCAACTTGAAAGAATTGTAGGATGTATTCCTCAGATTCTTAATCCAAATCCAGATGCAATGACTAAGATGATAACAGAAAATGCTAGTGAGGAATTCCTTCATTCTCTGAGTAATTATTGTGCACTTCAGGGTTTTGTGGAGGACCAGTTTGGGTTAGGTTTAATTGCAAGGGCAGTAGAAGAAGGGATATCAGTAATCAAACCAAATGGAATTATGATCTTTAATATGGGAGGTCGCCCAGGACAAGGTGTTTGCAAAAGATTGTTTGAGCGTCGGGGTTTTCGCATTACAAAGCTTTGGCAAACTAAAATCATTCAGGCTAATGTACTGGTACAGGCTGGTGACACAGATATTGCAGCCTTAGTTGAAATTGAGAAGAACAGCCCACACCGTTTTGAATTCTTTATGGGGCTTTCTGGAGATCAGCCTATTTGTGCACGGACAGCTTGGGCTTATGGAAAGTCTGGTGGCAGCATTTCCCATGCTTTATCAGTTTACAGTTGTCAACTTCGTCAACCTAACCAGGTTAAAGTTATATTTGAGTTTCTGAAAAATGGATTTCAAGAGATCAGCAGTTCTCTGGATTTGTATTTTGAGGATGATTCTGTTGCTGATGAAAAAATTCCTTTCCTTGCTTATCTTGCAAGCATTCTAAAAGATGATTCCTATTTTCCATATGAACCACCGGCTGGAAGCAAACGCTTCCGCAATCTCATTGCTGGATTTTTGAAGACATATCACCATATTCCACTCACTGCCAGTAATGTTGTCATTTTTCCTTCAAGGAATGCGGCTATTGAGAATGCTCTTCGCTTGTTCTCACCTCGGCTTGCAATTGTTGATGAACATCTGACTCGACACCTACCCAGGCAGTGGTTAACATCTTTGGCACTTGAGAATATGGGATCTATTGACTCTTTAGATGATACAATAACAGTAATTGAAGCCCCTCGGCAATCAGACTTAATGATAGAACTAATAAAGAAATTGAAGCCTCAAGTGGTGGTGACTGGAATTGCTATTTTTGAGGCTGTTACTAGTTCAGCTTTTGTGCACCTCTTAGATACAACGCGAGATGTTGGATCTCGTCTTTTCTTGGACATATCAGATCACTTTGAGCTATCCAGCCTTCCAGGATCAAATGGAGTCCTGAAGTATCTTTCAGGAAGTCCTCTACCCTCTCATGCGGCAATTATTTGCGGACTGGTAAAGAACAAGGTTTATCCAGATTTAGAAGTAGCTTTTGTCATTTCAGAAGAAGAGTCTCTCTTTAATGCATTGTCCAAAACTGTTGAGTTACTAGAAGGCAATACCGCATTAATCAGTCAGTACTATTATGGCTGTATTTTCCACGAGCTTCTTGCTTTTCAGCTGGCCTGCCGGCGTGCACCTTCTGAGAGAATCTGTGAAAATGTCAAATCAGTTGATATGATAGGATTTGCTAAATCAGCCGTATCAGTTCTTAATAATGCTGAGCTAGCAATTGACGGGGTAGATAATGGTTCCCTGATCCACATGGATGTTGATCAAATCTTTTTGCCTGTTCCATCTCCTGTCAAGGCTGCTATTTTTGAAAGTTTTGCTCGACAAAATATGTCTGAGTCTGAAATTGATGTCACCACAAGCATAAAAAAATTCGTCAAAAGCAACTACGGTTTTCCAACGGATACCAGCACGGAGTTTATATATTCTGACAATTCAAAAGCTCTTTTCAACAAACTGGTCCTCTGTTGCATTAAAGAAGGTGGCACCCTCTGTTTTCCAGCTGGATCAAATGGGAACTATGTTTCTTCTGCTACATTTTTGAAAGCTGACATAGTGACAGTTCCTACTGATGCCAGCGTAGGTTTTAAGTTCACGGAAAATACACTCACTGGAGTCCTTGGCACTGTGAAAAACCCATGGGTGTATATTTCTGGACCTACAATCAACCCCACTGGCTTAGTTTATAGCAACAAGGAGATAGGGGAGATTTTGAGTACCTGTGCTAGATTTGGTGCAAGAGTTATAATTGATACTTCATCCTCTGGTTTGGAATTTGACAGTAAAGGCTGGGGTGGCTGGGATTTGGAGGAGTGTTTGTCTAAGCTGAATTCTTCATTCAAGCCATCATTCTCTGTGTCTCTGCTCGGAGGATTGTCTCTTAAGATGCTCAATGGTGTTCTCAGATTTGGGTTTCTTATTCTTAACCAGTTGGGTTTGGTTGACACATTTTATAGTTTTCCGGGATTAAGTAAACCTCATAGTACTGTTAAATATGCTGCAAAGAAGTTGCTGGAGCTTAGAGAGCAGGAATCATCAATTCTATCAGATGCTATTGTTGAACATACACAGATTTTGAGAAGTAGATCCAAGTGCTTGAAGGAGGCACTTGAGAAGAGCGGTTGGGACGTGCTTGAATCGTGTGCTGGCATTTCTGTTGTGGCCAAACCTTCCGCCTATCTCAAAAAGACTATTAAGCTGAAGATTTCATCAAAAGGTGAAGTCAGCCAAGGAAATGCCACTGTGGAAATAAAGCTCGACGACTCAAATATTAGGAATGCCATTCTCGAAGCCACAGGTTTATGCATCAATAGTGGCTCTTGGACTGGAATTCCTGGATATTGTCGGTTCAATATTGCACTTGAAGAAAATGATTTCAAGAAAGCACTGGATTGTATACTAAAATTTAGAGAAGTTGCACTAGGTTAA
Protein sequence

>Msa0790580

MGWTTPTVDEFLQKCSQSGDAAYAALRSLLEGLEDLETRSQARIFLSLLQKRFPTKDSCDQCFQTYHFRIEDILLDQYEGHQGRNKLTMMVIPSIFLPEDWSFTFYEGINRHPDSIFKDRIVSELGCGNGWISIAIAEKWLPSKVYGLDINPRAVKISWINLYLNALDENGQPIYDEEKKTLLDRVEFHESDLLSYCRDNGIQLERIVGCIPQILNPNPDAMTKMITENASEEFLHSLSNYCALQGFVEDQFGLGLIARAVEEGISVIKPNGIMIFNMGGRPGQGVCKRLFERRGFRITKLWQTKIIQANVLVQAGDTDIAALVEIEKNSPHRFEFFMGLSGDQPICARTAWAYGKSGGSISHALSVYSCQLRQPNQVKVIFEFLKNGFQEISSSLDLYFEDDSVADEKIPFLAYLASILKDDSYFPYEPPAGSKRFRNLIAGFLKTYHHIPLTASNVVIFPSRNAAIENALRLFSPRLAIVDEHLTRHLPRQWLTSLALENMGSIDSLDDTITVIEAPRQSDLMIELIKKLKPQVVVTGIAIFEAVTSSAFVHLLDTTRDVGSRLFLDISDHFELSSLPGSNGVLKYLSGSPLPSHAAIICGLVKNKVYPDLEVAFVISEEESLFNALSKTVELLEGNTALISQYYYGCIFHELLAFQLACRRAPSERICENVKSVDMIGFAKSAVSVLNNAELAIDGVDNGSLIHMDVDQIFLPVPSPVKAAIFESFARQNMSESEIDVTTSIKKFVKSNYGFPTDTSTEFIYSDNSKALFNKLVLCCIKEGGTLCFPAGSNGNYVSSATFLKADIVTVPTDASVGFKFTENTLTGVLGTVKNPWVYISGPTINPTGLVYSNKEIGEILSTCARFGARVIIDTSSSGLEFDSKGWGGWDLEECLSKLNSSFKPSFSVSLLGGLSLKMLNGVLRFGFLILNQLGLVDTFYSFPGLSKPHSTVKYAAKKLLELREQESSILSDAIVEHTQILRSRSKCLKEALEKSGWDVLESCAGISVVAKPSAYLKKTIKLKISSKGEVSQGNATVEIKLDDSNIRNAILEATGLCINSGSWTGIPGYCRFNIALEENDFKKALDCILKFREVALG*