Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1074110 | XP_003625123.1 | 100.000 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 0.0 | 649 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1074110 | sp|Q9SS44|TF2B2_ARATH | 92.652 | 313 | 22 | 1 | 1 | 313 | 1 | 312 | 0.0 | 603 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1074110 | G7KSP1 | 100.000 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 0.0 | 649 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0030480 | Msa1074110 | 0.827781 | 1.293877e-54 | -8.615850e-47 |
Msa0030530 | Msa1074110 | 0.812069 | 5.104223e-51 | -8.615850e-47 |
Msa0047640 | Msa1074110 | 0.871425 | 6.904357e-67 | -8.615850e-47 |
Msa0080250 | Msa1074110 | 0.813384 | 2.630819e-51 | -8.615850e-47 |
Msa0081940 | Msa1074110 | 0.840508 | 8.334685e-58 | -8.615850e-47 |
Msa0082050 | Msa1074110 | 0.833789 | 4.358098e-56 | -8.615850e-47 |
Msa0608270 | Msa1074110 | 0.851359 | 9.343926e-61 | -8.615850e-47 |
Msa0648830 | Msa1074110 | 0.853378 | 2.486555e-61 | -8.615850e-47 |
Msa0656810 | Msa1074110 | 0.808896 | 2.471925e-50 | -8.615850e-47 |
Msa0699780 | Msa1074110 | 0.801316 | 9.538833e-49 | -8.615850e-47 |
Msa0705390 | Msa1074110 | 0.803678 | 3.107966e-49 | -8.615850e-47 |
Msa0790580 | Msa1074110 | 0.801910 | 7.204137e-49 | -8.615850e-47 |
Msa0125790 | Msa1074110 | 0.832206 | 1.078755e-55 | -8.615850e-47 |
Msa0128430 | Msa1074110 | 0.832852 | 7.461581e-56 | -8.615850e-47 |
Msa0137510 | Msa1074110 | 0.807095 | 5.975699e-50 | -8.615850e-47 |
Msa0144420 | Msa1074110 | 0.827840 | 1.252604e-54 | -8.615850e-47 |
Msa0144430 | Msa1074110 | 0.837538 | 4.901108e-57 | -8.615850e-47 |
Msa0146080 | Msa1074110 | 0.824662 | 7.147859e-54 | -8.615850e-47 |
Msa0146420 | Msa1074110 | 0.811035 | 8.562642e-51 | -8.615850e-47 |
Msa0167070 | Msa1074110 | 0.811100 | 8.287338e-51 | -8.615850e-47 |
Msa0171980 | Msa1074110 | 0.817690 | 2.893586e-52 | -8.615850e-47 |
Msa1030030 | Msa1074110 | 0.805792 | 1.125133e-49 | -8.615850e-47 |
Msa1043630 | Msa1074110 | 0.809648 | 1.705368e-50 | -8.615850e-47 |
Msa1074110 | Msa1087350 | 0.800332 | 1.514658e-48 | -8.615850e-47 |
Msa1074110 | Msa1123350 | 0.833413 | 5.410445e-56 | -8.615850e-47 |
Msa1074110 | Msa1156820 | 0.801091 | 1.060141e-48 | -8.615850e-47 |
Msa1074110 | Msa1159630 | 0.905400 | 4.469833e-80 | -8.615850e-47 |
Msa1074110 | Msa1162080 | 0.806671 | 7.345920e-50 | -8.615850e-47 |
Msa1074110 | Msa1206650 | 0.823653 | 1.233387e-53 | -8.615850e-47 |
Msa1074110 | Msa1298100 | 0.856210 | 3.751932e-62 | -8.615850e-47 |
Msa1074110 | Msa1356610 | 0.813529 | 2.444843e-51 | -8.615850e-47 |
Msa1074110 | Msa1366550 | 0.807313 | 5.372257e-50 | -8.615850e-47 |
Msa1074110 | Msa1374170 | 0.823457 | 1.371090e-53 | -8.615850e-47 |
Msa1074110 | Msa1382670 | 0.825826 | 3.792962e-54 | -8.615850e-47 |
Msa1074110 | Msa1412110 | 0.834015 | 3.826498e-56 | -8.615850e-47 |
Msa0314420 | Msa1074110 | 0.817429 | 3.312804e-52 | -8.615850e-47 |
Msa0511150 | Msa1074110 | 0.806629 | 7.495860e-50 | -8.615850e-47 |
Msa0519150 | Msa1074110 | 0.822963 | 1.787807e-53 | -8.615850e-47 |
Msa0534980 | Msa1074110 | 0.837684 | 4.495926e-57 | -8.615850e-47 |
Msa0544730 | Msa1074110 | 0.854856 | 9.311661e-62 | -8.615850e-47 |
Msa0572750 | Msa1074110 | 0.840128 | 1.047569e-57 | -8.615850e-47 |
Msa0581970 | Msa1074110 | 0.803333 | 3.664551e-49 | -8.615850e-47 |
Msa0583670 | Msa1074110 | 0.832579 | 8.723124e-56 | -8.615850e-47 |
Msa0968440 | Msa1074110 | 0.806289 | 8.841772e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1074110 | MtrunA17_Chr7g0257271 | 100.000 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 0.0 | 649 |
Msa1074110 | MtrunA17_Chr3g0091551 | 92.652 | 313 | 23 | 0 | 1 | 313 | 1 | 313 | 0.0 | 608 |
Msa1074110 | MtrunA17_Chr3g0092431 | 81.935 | 310 | 51 | 1 | 1 | 310 | 1 | 305 | 0.0 | 528 |
Msa1074110 | MtrunA17_Chr3g0092491 | 74.760 | 313 | 36 | 1 | 1 | 313 | 1 | 270 | 2.82e-164 | 457 |
Msa1074110 | MtrunA17_Chr1g0173141 | 81.865 | 193 | 34 | 1 | 121 | 313 | 4 | 195 | 5.61e-115 | 330 |
Msa1074110 | MtrunA17_Chr1g0173151 | 79.661 | 118 | 24 | 0 | 1 | 118 | 1 | 118 | 8.19e-64 | 197 |
Msa1074110 | MtrunA17_Chr1g0156011 | 67.416 | 89 | 22 | 2 | 210 | 291 | 28 | 116 | 1.36e-29 | 109 |
Msa1074110 | MtrunA17_Chr5g0403861 | 34.184 | 196 | 121 | 4 | 108 | 301 | 134 | 323 | 1.55e-21 | 94.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1074110 | AT3G10330.1 | 92.652 | 313 | 22 | 1 | 1 | 313 | 1 | 312 | 0.0 | 603 |
Msa1074110 | AT2G41630.1 | 84.984 | 313 | 46 | 1 | 1 | 313 | 1 | 312 | 0.0 | 558 |
Msa1074110 | AT3G29380.1 | 42.767 | 318 | 171 | 5 | 1 | 307 | 1 | 318 | 1.72e-83 | 255 |
Msa1074110 | AT3G57370.1 | 33.333 | 369 | 170 | 10 | 6 | 313 | 9 | 362 | 2.97e-47 | 162 |
Msa1074110 | AT4G10680.1 | 34.694 | 196 | 102 | 5 | 3 | 195 | 4 | 176 | 2.16e-23 | 95.1 |
Msa1074110 | AT4G36650.1 | 34.694 | 196 | 120 | 4 | 108 | 301 | 133 | 322 | 8.35e-22 | 95.9 |
Msa1074110 | AT4G36650.2 | 35.057 | 174 | 105 | 4 | 108 | 279 | 133 | 300 | 6.90e-18 | 83.6 |
Find 120 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGCACGGCCAATTTCCTTCT+TGG | 0.087015 | 7_2:+71831329 | None:intergenic |
AATGATTTCATCACCTTTAT+AGG | 0.100575 | 7_2:+71829142 | None:intergenic |
AGCCTCCTCATTCAAGTATT+TGG | 0.120046 | 7_2:-71829243 | Msa1074110:three_prime_UTR |
AATTCATGCTGGGGACTTTA+TGG | 0.146027 | 7_2:-71831244 | Msa1074110:intron |
GCCTCCTCATTCAAGTATTT+GGG | 0.259545 | 7_2:-71829242 | Msa1074110:three_prime_UTR |
AACTGCTGCAGCAATTGATA+TGG | 0.274816 | 7_2:+71830214 | None:intergenic |
ACGAAATACACATACCTTAA+TGG | 0.290265 | 7_2:+71833089 | None:intergenic |
ATCATAGGATGTACCCTTTA+CGG | 0.305878 | 7_2:+71831458 | None:intergenic |
ATCCTTGCGTTCAAAACTAT+TGG | 0.312072 | 7_2:-71833339 | Msa1074110:CDS |
ATCGGTAAGGAGAGGGTTAC+TGG | 0.314300 | 7_2:+71833470 | None:intergenic |
GGTGATTATATCTGTGAATA+TGG | 0.327014 | 7_2:+71829196 | None:intergenic |
AAGAAATCAGGACGCATTAT+TGG | 0.327460 | 7_2:-71831526 | Msa1074110:CDS |
GGGACTGGTTCCGACCATTA+AGG | 0.332605 | 7_2:-71833103 | Msa1074110:intron |
GTTCAAAACTATTGGTACTA+TGG | 0.338830 | 7_2:-71833331 | Msa1074110:CDS |
TTCCTTCTTGGTGGCTCCAT+TGG | 0.342202 | 7_2:+71831341 | None:intergenic |
TGAAACGGAGGATAAATTAA+TGG | 0.342541 | 7_2:+71833836 | None:intergenic |
TGGCGGTCAATCTGTTGAAA+TGG | 0.354243 | 7_2:-71831271 | Msa1074110:CDS |
AATCAGAAGAATTTGATATA+AGG | 0.356784 | 7_2:-71831022 | Msa1074110:intron |
GGAGCCACCAAGAAGGAAAT+TGG | 0.363081 | 7_2:-71831336 | Msa1074110:CDS |
ATTGGGGCACCTTTGTTGTC+TGG | 0.381254 | 7_2:-71829122 | Msa1074110:three_prime_UTR |
GCTAAGCCTAACGGTGCTTC+CGG | 0.382114 | 7_2:-71833426 | Msa1074110:CDS |
AAGATAATATTATCCTATAA+AGG | 0.383319 | 7_2:-71829155 | Msa1074110:three_prime_UTR |
GTCTAGCAGGGGAAGAAATC+AGG | 0.396384 | 7_2:-71831538 | Msa1074110:CDS |
CATAGTGAAACAACTGGGTT+TGG | 0.405085 | 7_2:-71831298 | Msa1074110:CDS |
ATAAAGGTGATGAAATCATT+GGG | 0.417976 | 7_2:-71829139 | Msa1074110:three_prime_UTR |
TATAAAGGTGATGAAATCAT+TGG | 0.419152 | 7_2:-71829140 | Msa1074110:three_prime_UTR |
TCTTCCTTCGCATACCAGTT+TGG | 0.420592 | 7_2:+71829434 | None:intergenic |
AGAATACATAGTGAAACAAC+TGG | 0.423190 | 7_2:-71831304 | Msa1074110:CDS |
TTCAACTTTCAATGACATCT+AGG | 0.423539 | 7_2:+71829354 | None:intergenic |
GACAAGCCACGAACCGTAAA+GGG | 0.425450 | 7_2:-71831471 | Msa1074110:intron |
GTTTCCGAGTTTCTCTCTCT+AGG | 0.426134 | 7_2:+71833678 | None:intergenic |
TTGATTGAAGATGTGTTTGA+TGG | 0.427255 | 7_2:+71833864 | None:intergenic |
CTGGGACCACCGACACGAAC+GGG | 0.431529 | 7_2:+71833489 | None:intergenic |
TTCGGAGTGTGGTCTCGTCT+TGG | 0.434035 | 7_2:-71833577 | Msa1074110:CDS |
TTTCAAAGATAATACCAAAC+TGG | 0.453182 | 7_2:-71829448 | Msa1074110:CDS |
CGAACCTTCGCTAACGAATC+CGG | 0.453434 | 7_2:-71833522 | Msa1074110:CDS |
CGCCGGCGATGCAGTCTGTT+CGG | 0.458749 | 7_2:-71833595 | Msa1074110:CDS |
ATCCTTGTATGAGTTCCTAA+TGG | 0.459175 | 7_2:+71829484 | None:intergenic |
GATGTACCCTTTACGGTTCG+TGG | 0.464597 | 7_2:+71831465 | None:intergenic |
GGCGGTCAATCTGTTGAAAT+GGG | 0.469059 | 7_2:-71831270 | Msa1074110:CDS |
AAACAACTGGGTTTGGAGAA+TGG | 0.469627 | 7_2:-71831291 | Msa1074110:CDS |
TCAAGCTGTTAAAGCTGCTC+AGG | 0.470264 | 7_2:-71831057 | Msa1074110:CDS |
TCTCGTCTTCTCTCGGTCGT+TGG | 0.473284 | 7_2:-71833395 | Msa1074110:CDS |
ACGGCCAATTTCCTTCTTGG+TGG | 0.479855 | 7_2:+71831332 | None:intergenic |
AAACACAATTAACACATCAA+TGG | 0.482079 | 7_2:-71833782 | Msa1074110:five_prime_UTR |
CTCCGAACAGACTGCATCGC+CGG | 0.488164 | 7_2:+71833593 | None:intergenic |
TGAGAGCGTTTGAAATGAAA+CGG | 0.497457 | 7_2:+71833821 | None:intergenic |
ACTGCTGCAGCAATTGATAT+GGG | 0.502657 | 7_2:+71830215 | None:intergenic |
TTTCCGAGTTTCTCTCTCTA+GGG | 0.508097 | 7_2:+71833679 | None:intergenic |
TTGAAGATCAGAAGTCTAGC+AGG | 0.514009 | 7_2:-71831551 | Msa1074110:CDS |
AACGATCCCGTTCGTGTCGG+TGG | 0.516852 | 7_2:-71833495 | Msa1074110:CDS |
TGGTATTATCTTTGAAACAT+GGG | 0.517194 | 7_2:+71829454 | None:intergenic |
CGACTGCAAGCGAGCGACGG+AGG | 0.519185 | 7_2:-71833634 | Msa1074110:CDS |
AGACAAGCCACGAACCGTAA+AGG | 0.530566 | 7_2:-71831472 | Msa1074110:CDS |
CTCGGTCGTTGGCAGAATCG+TGG | 0.531216 | 7_2:-71833384 | Msa1074110:CDS |
GCAGATATATCAGTTGCTAC+AGG | 0.531635 | 7_2:-71829521 | Msa1074110:intron |
CAGCGACTGCAAGCGAGCGA+CGG | 0.532018 | 7_2:-71833637 | Msa1074110:CDS |
GAAATGGGAACAATTCATGC+TGG | 0.537995 | 7_2:-71831255 | Msa1074110:CDS |
CGCAAGGATCAATCCACGAT+CGG | 0.538169 | 7_2:+71833353 | None:intergenic |
CTGCAAGCGAGCGACGGAGG+TGG | 0.539765 | 7_2:-71833631 | Msa1074110:CDS |
GCAAGGATCAATCCACGATC+GGG | 0.539890 | 7_2:+71833354 | None:intergenic |
GAAATTTGCTCGATTGCCAA+TGG | 0.542448 | 7_2:-71831357 | Msa1074110:CDS |
AAATGGGAACAATTCATGCT+GGG | 0.542849 | 7_2:-71831254 | Msa1074110:CDS |
CCACTCGGAGGTTTCATCGA+TGG | 0.547579 | 7_2:+71833545 | None:intergenic |
GTTAGCGAAGGTTCGCCACT+CGG | 0.548954 | 7_2:+71833530 | None:intergenic |
TTGGTATTATCTTTGAAACA+TGG | 0.552826 | 7_2:+71829453 | None:intergenic |
AGCTAATGAGATATATAAGC+GGG | 0.555073 | 7_2:-71831574 | Msa1074110:CDS |
ACCGTTAGGCTTAGCAATGA+CGG | 0.566962 | 7_2:+71833434 | None:intergenic |
ACTGGGACCACCGACACGAA+CGG | 0.567033 | 7_2:+71833488 | None:intergenic |
AACCATTAGGAACTCATACA+AGG | 0.569754 | 7_2:-71829486 | Msa1074110:CDS |
TGGAGAGACCACCATCGGTA+AGG | 0.571293 | 7_2:+71833457 | None:intergenic |
GCTGCAAAACGCATCGGACA+TGG | 0.572012 | 7_2:+71833656 | None:intergenic |
GGTATTATCTTTGAAACATG+GGG | 0.573323 | 7_2:+71829455 | None:intergenic |
AACCCTCTCCTTACCGATGG+TGG | 0.575511 | 7_2:-71833465 | Msa1074110:CDS |
GAGTTGCAGAAGGAACCATT+AGG | 0.581627 | 7_2:-71829499 | Msa1074110:CDS |
ACCGTCATTGCTAAGCCTAA+CGG | 0.585900 | 7_2:-71833435 | Msa1074110:CDS |
CCTCCTCATTCAAGTATTTG+GGG | 0.587551 | 7_2:-71829241 | Msa1074110:three_prime_UTR |
TGCCAATGGAGCCACCAAGA+AGG | 0.588006 | 7_2:-71831343 | Msa1074110:CDS |
TCACTATGTATTCTTTCGCA+CGG | 0.590768 | 7_2:+71831313 | None:intergenic |
AGAAGACGAGAGAAAATCAC+CGG | 0.590877 | 7_2:+71833407 | None:intergenic |
TAATTATAGTTATTACGAGA+CGG | 0.591027 | 7_2:+71829278 | None:intergenic |
AATACACATACCTTAATGGT+CGG | 0.591568 | 7_2:+71833093 | None:intergenic |
TCGGTAAGGAGAGGGTTACT+GGG | 0.602364 | 7_2:+71833471 | None:intergenic |
GACCACCATCGGTAAGGAGA+GGG | 0.603996 | 7_2:+71833463 | None:intergenic |
GATGCAGTCTGTTCGGAGTG+TGG | 0.606400 | 7_2:-71833588 | Msa1074110:CDS |
GCAGTCGCTGCAAAACGCAT+CGG | 0.606677 | 7_2:+71833650 | None:intergenic |
GCTTATATATCTCATTAGCT+CGG | 0.615889 | 7_2:+71831577 | None:intergenic |
AGTAACCCTCTCCTTACCGA+TGG | 0.620939 | 7_2:-71833468 | Msa1074110:CDS |
AATACCAAACTGGTATGCGA+AGG | 0.621663 | 7_2:-71829438 | Msa1074110:CDS |
ATCACCGGATTCGTTAGCGA+AGG | 0.621681 | 7_2:+71833518 | None:intergenic |
TGAAGATCAGAAGTCTAGCA+GGG | 0.622654 | 7_2:-71831550 | Msa1074110:CDS |
GTGGTGTTCGACCACTCCGC+CGG | 0.623423 | 7_2:-71833612 | Msa1074110:CDS |
AGCGAAGGTTCGCCACTCGG+AGG | 0.626549 | 7_2:+71833533 | None:intergenic |
AGACTGCATCGCCGGCGGAG+TGG | 0.627397 | 7_2:+71833601 | None:intergenic |
AACTGTCACAGACCTTTGAG+AGG | 0.627588 | 7_2:+71830155 | None:intergenic |
AAATCACCGGAAGCACCGTT+AGG | 0.631103 | 7_2:+71833420 | None:intergenic |
CCCCAAATACTTGAATGAGG+AGG | 0.632132 | 7_2:+71829241 | None:intergenic |
AAACCCTAGAGAGAGAAACT+CGG | 0.633229 | 7_2:-71833682 | Msa1074110:five_prime_UTR |
CTCCTCATTCAAGTATTTGG+GGG | 0.635364 | 7_2:-71829240 | Msa1074110:three_prime_UTR |
AAACTGGTATGCGAAGGAAG+AGG | 0.641876 | 7_2:-71829432 | Msa1074110:CDS |
GGGGAGACTGGAGAGTGGAG+AGG | 0.642780 | 7_2:-71829221 | Msa1074110:three_prime_UTR |
CTTGTCGACAAGCAATGTAG+AGG | 0.643119 | 7_2:+71831496 | None:intergenic |
GTTGCTACAGGAGTTGCAGA+AGG | 0.648786 | 7_2:-71829509 | Msa1074110:CDS |
ATGAAATGGCCAGACAACAA+AGG | 0.650602 | 7_2:+71829113 | None:intergenic |
GACGGTGGAGAGACCACCAT+CGG | 0.651740 | 7_2:+71833452 | None:intergenic |
GATAACGATCCCGTTCGTGT+CGG | 0.652271 | 7_2:-71833498 | Msa1074110:CDS |
CGTGGTTCTAATCCCGATCG+TGG | 0.653015 | 7_2:-71833366 | Msa1074110:CDS |
CGAACAGACTGCATCGCCGG+CGG | 0.655902 | 7_2:+71833596 | None:intergenic |
CTATTGGTACTATGGCTGAG+AGG | 0.657231 | 7_2:-71833323 | Msa1074110:intron |
AGACCACCATCGGTAAGGAG+AGG | 0.659672 | 7_2:+71833462 | None:intergenic |
ACGAACGGGATCGTTATCAC+CGG | 0.663003 | 7_2:+71833503 | None:intergenic |
GAAGATCAGAAGTCTAGCAG+GGG | 0.664166 | 7_2:-71831549 | Msa1074110:CDS |
AATGGGAACAATTCATGCTG+GGG | 0.664649 | 7_2:-71831253 | Msa1074110:CDS |
TAAAGGTGATGAAATCATTG+GGG | 0.684396 | 7_2:-71829138 | Msa1074110:three_prime_UTR |
GAGCTAATGAGATATATAAG+CGG | 0.694381 | 7_2:-71831575 | Msa1074110:CDS |
GAATACATAGTGAAACAACT+GGG | 0.707930 | 7_2:-71831303 | Msa1074110:CDS |
GTTAGGCTTAGCAATGACGG+TGG | 0.724217 | 7_2:+71833437 | None:intergenic |
GAGCGTTTGAAATGAAACGG+AGG | 0.735680 | 7_2:+71833824 | None:intergenic |
CCATCGATGAAACCTCCGAG+TGG | 0.757869 | 7_2:-71833545 | Msa1074110:CDS |
CAACTGGGTTTGGAGAATGG+CGG | 0.759270 | 7_2:-71831288 | Msa1074110:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CGTAAATTTTTGAATTATTA+TGG | - | chr7_2:71829720-71829739 | Msa1074110:intron | 15.0% |
!!! | TAAAGATAGAAATATTTTGT+TGG | - | chr7_2:71830338-71830357 | Msa1074110:intron | 15.0% |
!!! | CAAGATTGTTTTTTATTTTT+TGG | - | chr7_2:71832242-71832261 | Msa1074110:intron | 15.0% |
!! | ATAAATAATTGAACCTAAAT+AGG | + | chr7_2:71832622-71832641 | None:intergenic | 15.0% |
!!! | AATTTTTTTAAGATGTACAA+AGG | - | chr7_2:71833145-71833164 | Msa1074110:intron | 15.0% |
!! | TAACTTAAATATACATATAG+AGG | + | chr7_2:71833367-71833386 | None:intergenic | 15.0% |
!!! | ATAATATTATCTTTTCATCA+AGG | + | chr7_2:71833819-71833838 | None:intergenic | 15.0% |
!! | AAGATAATATTATCCTATAA+AGG | - | chr7_2:71833826-71833845 | Msa1074110:five_prime_UTR | 15.0% |
!!! | GTGTTAATTGTGTTTTTTTT+CGG | + | chr7_2:71829194-71829213 | None:intergenic | 20.0% |
!!! | AGGAAGTATAATTAGTTAAT+GGG | - | chr7_2:71830276-71830295 | Msa1074110:intron | 20.0% |
!! | ACATGTTAAGAATCTAAAAA+TGG | + | chr7_2:71830432-71830451 | None:intergenic | 20.0% |
!! | ACATGTTAAGAATCTAAAAA+TGG | + | chr7_2:71830432-71830451 | None:intergenic | 20.0% |
!!! | GTTATGTTTTTTTGATGAAA+AGG | - | chr7_2:71830656-71830675 | Msa1074110:intron | 20.0% |
!!! | TTGTTTTGAAAATTTATGAG+CGG | - | chr7_2:71831087-71831106 | Msa1074110:CDS | 20.0% |
!!! | AAAAAACTACAACTTTTTCA+AGG | + | chr7_2:71831308-71831327 | None:intergenic | 20.0% |
!! | TAAAAAACACTAACTTTACA+TGG | + | chr7_2:71831349-71831368 | None:intergenic | 20.0% |
!! | CTATATGTTAAAAGAATCAT+AGG | + | chr7_2:71831541-71831560 | None:intergenic | 20.0% |
!! | AATCAGAAGAATTTGATATA+AGG | - | chr7_2:71831959-71831978 | Msa1074110:intron | 20.0% |
!!! | TGCAGTATAATTTTTCATTT+TGG | + | chr7_2:71832309-71832328 | None:intergenic | 20.0% |
!! | ATTATGTCTACTGTTAAATT+TGG | - | chr7_2:71832559-71832578 | Msa1074110:intron | 20.0% |
!! | TAAAGAAGCCATAAAAATTA+AGG | + | chr7_2:71832672-71832691 | None:intergenic | 20.0% |
!!! | AGTTCTTTTTTTGTTTTTTG+AGG | - | chr7_2:71832845-71832864 | Msa1074110:intron | 20.0% |
!!! | GTTCTTTTTTTGTTTTTTGA+GGG | - | chr7_2:71832846-71832865 | Msa1074110:intron | 20.0% |
!!! | TTCAAATAAGTTTCTAAAAG+TGG | - | chr7_2:71832997-71833016 | Msa1074110:intron | 20.0% |
!! | TAATTATAGTTATTACGAGA+CGG | + | chr7_2:71833706-71833725 | None:intergenic | 20.0% |
! | AAACACAATTAACACATCAA+TGG | - | chr7_2:71829199-71829218 | Msa1074110:three_prime_UTR | 25.0% |
!!! | TGATGAAATTTTTTCAGGTT+GGG | - | chr7_2:71829858-71829877 | Msa1074110:intron | 25.0% |
! | TTCTCAAATTGTTATCATTG+TGG | + | chr7_2:71830028-71830047 | None:intergenic | 25.0% |
! | TGTTAAGTTATATACTCTCT+TGG | - | chr7_2:71830151-71830170 | Msa1074110:intron | 25.0% |
! | CAACTACTTATCTTAATAAG+TGG | + | chr7_2:71830211-71830230 | None:intergenic | 25.0% |
!! | GAGGAAGTATAATTAGTTAA+TGG | - | chr7_2:71830275-71830294 | Msa1074110:intron | 25.0% |
! | TCAAACTACAAACATTATCT+AGG | + | chr7_2:71830904-71830923 | None:intergenic | 25.0% |
!! | GCTCATAAATTTTCAAAACA+AGG | + | chr7_2:71831088-71831107 | None:intergenic | 25.0% |
!! | AAGTTCACTTTGTTATAAGT+TGG | - | chr7_2:71831127-71831146 | Msa1074110:intron | 25.0% |
!! | TTTCTTATGCTATGATTTGT+AGG | - | chr7_2:71831380-71831399 | Msa1074110:intron | 25.0% |
! | TATACAGGGAAAAATGTATA+GGG | + | chr7_2:71831570-71831589 | None:intergenic | 25.0% |
!! | ATTTCTATTTGAAATTCACC+AGG | + | chr7_2:71831609-71831628 | None:intergenic | 25.0% |
! | AAAGTCTAAAGAAAAAAGTC+AGG | + | chr7_2:71831994-71832013 | None:intergenic | 25.0% |
! | ATAATGAAATAGATATCCAC+TGG | - | chr7_2:71832016-71832035 | Msa1074110:intron | 25.0% |
! | TAAACTAAAGCAAATACTGT+TGG | + | chr7_2:71832137-71832156 | None:intergenic | 25.0% |
!! | AACAGTATTTGCTTTAGTTT+AGG | - | chr7_2:71832136-71832155 | Msa1074110:intron | 25.0% |
!! | ACAGTATTTGCTTTAGTTTA+GGG | - | chr7_2:71832137-71832156 | Msa1074110:intron | 25.0% |
! | TAGTTTAGTCATTAATCAGA+TGG | - | chr7_2:71832386-71832405 | Msa1074110:intron | 25.0% |
! | AATAAGTTGTTCAAACTCAT+AGG | + | chr7_2:71832531-71832550 | None:intergenic | 25.0% |
! | AGGTGAACTATCATTATATA+TGG | + | chr7_2:71832602-71832621 | None:intergenic | 25.0% |
! | TAATGATAGTTCACCTATTT+AGG | - | chr7_2:71832606-71832625 | Msa1074110:intron | 25.0% |
!!! | TTTTTTATCATCTGAAAGCT+GGG | + | chr7_2:71832806-71832825 | None:intergenic | 25.0% |
! | TGGAAAACATGAAATACAAA+CGG | - | chr7_2:71832889-71832908 | Msa1074110:intron | 25.0% |
!!! | TTGATGACGTGAATTTTATT+TGG | - | chr7_2:71832961-71832980 | Msa1074110:intron | 25.0% |
!! | AAATAAGTTTCTAAAAGTGG+TGG | - | chr7_2:71833000-71833019 | Msa1074110:intron | 25.0% |
!! | AATAAGTTTCTAAAAGTGGT+GGG | - | chr7_2:71833001-71833020 | Msa1074110:intron | 25.0% |
!!! | AGTGTGGATGAATTTTTTAT+TGG | - | chr7_2:71833024-71833043 | Msa1074110:intron | 25.0% |
!!! | CGATAATTGTTTTGAAAACA+AGG | - | chr7_2:71833079-71833098 | Msa1074110:intron | 25.0% |
! | AATGTAAAAATCACTTCAAC+AGG | - | chr7_2:71833168-71833187 | Msa1074110:intron | 25.0% |
! | CAATTAATCACATAATTCAG+TGG | + | chr7_2:71833242-71833261 | None:intergenic | 25.0% |
!!! | TGTATTTAGAGAAGTTTTGT+GGG | - | chr7_2:71833316-71833335 | Msa1074110:intron | 25.0% |
!!! | ATTTGTTTTTCAATCACATG+TGG | + | chr7_2:71833344-71833363 | None:intergenic | 25.0% |
! | ATATATCTGCAACAAAGAAA+TGG | + | chr7_2:71833450-71833469 | None:intergenic | 25.0% |
!!! | TGGTATTATCTTTGAAACAT+GGG | + | chr7_2:71833530-71833549 | None:intergenic | 25.0% |
!!! | TTGGTATTATCTTTGAAACA+TGG | + | chr7_2:71833531-71833550 | None:intergenic | 25.0% |
! | TTTCAAAGATAATACCAAAC+TGG | - | chr7_2:71833533-71833552 | Msa1074110:CDS | 25.0% |
! | AATGATTTCATCACCTTTAT+AGG | + | chr7_2:71833842-71833861 | None:intergenic | 25.0% |
! | TATAAAGGTGATGAAATCAT+TGG | - | chr7_2:71833841-71833860 | Msa1074110:five_prime_UTR | 25.0% |
! | ATAAAGGTGATGAAATCATT+GGG | - | chr7_2:71833842-71833861 | Msa1074110:five_prime_UTR | 25.0% |
TGAAACGGAGGATAAATTAA+TGG | + | chr7_2:71829148-71829167 | None:intergenic | 30.0% | |
GTTCAAAACTATTGGTACTA+TGG | - | chr7_2:71829650-71829669 | Msa1074110:intron | 30.0% | |
!!! | GTTGTTTTGATTGATGATTG+AGG | - | chr7_2:71829806-71829825 | Msa1074110:intron | 30.0% |
! | AAATGTGAATTTTGCTGACA+TGG | - | chr7_2:71829830-71829849 | Msa1074110:intron | 30.0% |
!!! | ATCGCTGATGAAATTTTTTC+AGG | - | chr7_2:71829853-71829872 | Msa1074110:intron | 30.0% |
!!! | CTGATGAAATTTTTTCAGGT+TGG | - | chr7_2:71829857-71829876 | Msa1074110:intron | 30.0% |
AATACACATACCTTAATGGT+CGG | + | chr7_2:71829891-71829910 | None:intergenic | 30.0% | |
ACGAAATACACATACCTTAA+TGG | + | chr7_2:71829895-71829914 | None:intergenic | 30.0% | |
! | GTGTATTTCGTCTTCTATTT+TGG | - | chr7_2:71829904-71829923 | Msa1074110:intron | 30.0% |
CTCAATATCAAACACTATTG+TGG | - | chr7_2:71830089-71830108 | Msa1074110:intron | 30.0% | |
! | AAGTAGTTGTAGCATTGAAT+CGG | - | chr7_2:71830222-71830241 | Msa1074110:CDS | 30.0% |
ATAAAAACCGGAAAAAAGAG+AGG | - | chr7_2:71830253-71830272 | Msa1074110:intron | 30.0% | |
TACCCTTAGTTAATTACCAA+AGG | - | chr7_2:71830548-71830567 | Msa1074110:intron | 30.0% | |
! | CACCTTTGGTAATTAACTAA+GGG | + | chr7_2:71830553-71830572 | None:intergenic | 30.0% |
! | TCACCTTTGGTAATTAACTA+AGG | + | chr7_2:71830554-71830573 | None:intergenic | 30.0% |
!! | AACCCTAGCTTTTAAACAAA+AGG | - | chr7_2:71830630-71830649 | Msa1074110:intron | 30.0% |
!! | CACCTTTTGTTTAAAAGCTA+GGG | + | chr7_2:71830635-71830654 | None:intergenic | 30.0% |
!! | ACACCTTTTGTTTAAAAGCT+AGG | + | chr7_2:71830636-71830655 | None:intergenic | 30.0% |
TTTAATTCTCTGATACTTCC+CGG | - | chr7_2:71830800-71830819 | Msa1074110:intron | 30.0% | |
TCCAAAAAATGCCAAAGTAT+CGG | + | chr7_2:71830869-71830888 | None:intergenic | 30.0% | |
ACTACAAACATTATCTAGGA+AGG | + | chr7_2:71830900-71830919 | None:intergenic | 30.0% | |
! | TGACCTTTTTGAACCTTTTT+TGG | - | chr7_2:71831013-71831032 | Msa1074110:intron | 30.0% |
! | GACCTTTTTGAACCTTTTTT+GGG | - | chr7_2:71831014-71831033 | Msa1074110:intron | 30.0% |
!! | ACCTTTTTGAACCTTTTTTG+GGG | - | chr7_2:71831015-71831034 | Msa1074110:intron | 30.0% |
TCAACAAATTTCCCCAAAAA+AGG | + | chr7_2:71831029-71831048 | None:intergenic | 30.0% | |
CAAAACAAGGTTTGAATGTT+TGG | + | chr7_2:71831075-71831094 | None:intergenic | 30.0% | |
CACTCACTATTAAAAACTTC+TGG | + | chr7_2:71831163-71831182 | None:intergenic | 30.0% | |
GCTTATATATCTCATTAGCT+CGG | + | chr7_2:71831407-71831426 | None:intergenic | 30.0% | |
GAGCTAATGAGATATATAAG+CGG | - | chr7_2:71831406-71831425 | Msa1074110:intron | 30.0% | |
AGCTAATGAGATATATAAGC+GGG | - | chr7_2:71831407-71831426 | Msa1074110:intron | 30.0% | |
GTATACAGGGAAAAATGTAT+AGG | + | chr7_2:71831571-71831590 | None:intergenic | 30.0% | |
AGAATACATAGTGAAACAAC+TGG | - | chr7_2:71831677-71831696 | Msa1074110:intron | 30.0% | |
GAATACATAGTGAAACAACT+GGG | - | chr7_2:71831678-71831697 | Msa1074110:intron | 30.0% | |
!! | AAAATCGTCTCTGAAATTTG+AGG | + | chr7_2:71831882-71831901 | None:intergenic | 30.0% |
! | AGACGATTTTGTTCTAATCT+TGG | - | chr7_2:71831892-71831911 | Msa1074110:intron | 30.0% |
ATGTCTACTGTTAAATTTGG+TGG | - | chr7_2:71832562-71832581 | Msa1074110:intron | 30.0% | |
! | TCACAGCACCTTAATTTTTA+TGG | - | chr7_2:71832661-71832680 | Msa1074110:intron | 30.0% |
CTAATAACATTTAATCTGCC+AGG | - | chr7_2:71832737-71832756 | Msa1074110:intron | 30.0% | |
!!! | GTTTTTTATCATCTGAAAGC+TGG | + | chr7_2:71832807-71832826 | None:intergenic | 30.0% |
GATGATAAAAAACCTCTCAA+AGG | - | chr7_2:71832814-71832833 | Msa1074110:intron | 30.0% | |
!!! | TTTTTTGTTTTTTGAGGGAG+AGG | - | chr7_2:71832851-71832870 | Msa1074110:intron | 30.0% |
!!! | TTTTTGTTTTTTGAGGGAGA+GGG | - | chr7_2:71832852-71832871 | Msa1074110:intron | 30.0% |
AATTCACGTCATCAATTCTA+TGG | + | chr7_2:71832956-71832975 | None:intergenic | 30.0% | |
TATATATATTGCACCCAGTT+CGG | - | chr7_2:71833053-71833072 | Msa1074110:intron | 30.0% | |
! | GTGTATTTAGAGAAGTTTTG+TGG | - | chr7_2:71833315-71833334 | Msa1074110:intron | 30.0% |
! | ATGTTCTCATCTCTCTTTTA+TGG | - | chr7_2:71833386-71833405 | Msa1074110:CDS | 30.0% |
!! | CAAAGAAATGGATTATGTAC+AGG | + | chr7_2:71833438-71833457 | None:intergenic | 30.0% |
!! | GGTATTATCTTTGAAACATG+GGG | + | chr7_2:71833529-71833548 | None:intergenic | 30.0% |
TTCAACTTTCAATGACATCT+AGG | + | chr7_2:71833630-71833649 | None:intergenic | 30.0% | |
GGTGATTATATCTGTGAATA+TGG | + | chr7_2:71833788-71833807 | None:intergenic | 30.0% | |
TAAAGGTGATGAAATCATTG+GGG | - | chr7_2:71833843-71833862 | Msa1074110:five_prime_UTR | 30.0% | |
!! | TGAGAGCGTTTGAAATGAAA+CGG | + | chr7_2:71829163-71829182 | None:intergenic | 35.0% |
ATCCTTGCGTTCAAAACTAT+TGG | - | chr7_2:71829642-71829661 | Msa1074110:intron | 35.0% | |
!!! | TACCAATAGTTTTGAACGCA+AGG | + | chr7_2:71829647-71829666 | None:intergenic | 35.0% |
!!! | AAATTTTTTCAGGTTGGGAC+TGG | - | chr7_2:71829863-71829882 | Msa1074110:intron | 35.0% |
CATGTAAGCATCTATTGTTG+TGG | - | chr7_2:71830112-71830131 | Msa1074110:intron | 35.0% | |
TCGGTCTCTAACATAAAAAC+CGG | - | chr7_2:71830241-71830260 | Msa1074110:intron | 35.0% | |
!!! | CTTTTTAACTTGTGCCTTGA+GGG | + | chr7_2:71830317-71830336 | None:intergenic | 35.0% |
TGACCGATACGTTTATGATA+CGG | + | chr7_2:71830760-71830779 | None:intergenic | 35.0% | |
TTAATTCTCTGATACTTCCC+GGG | - | chr7_2:71830801-71830820 | Msa1074110:intron | 35.0% | |
ATACGTGTTTGATAAGTTCC+CGG | + | chr7_2:71830822-71830841 | None:intergenic | 35.0% | |
GGAACTTATCAAACACGTAT+TGG | - | chr7_2:71830822-71830841 | Msa1074110:intron | 35.0% | |
! | TATCAAACACGTATTGGTGT+CGG | - | chr7_2:71830828-71830847 | Msa1074110:intron | 35.0% |
!!! | ACCGATACTTTGGCATTTTT+TGG | - | chr7_2:71830865-71830884 | Msa1074110:intron | 35.0% |
!!! | TTTGGCATTTTTTGGAGTAG+CGG | - | chr7_2:71830873-71830892 | Msa1074110:intron | 35.0% |
! | TGGTTTGCAATTTGCATTGT+TGG | - | chr7_2:71830986-71831005 | Msa1074110:intron | 35.0% |
TCCCCAAAAAAGGTTCAAAA+AGG | + | chr7_2:71831019-71831038 | None:intergenic | 35.0% | |
!! | TTGGGGAAATTTGTTGAGAA+TGG | - | chr7_2:71831032-71831051 | Msa1074110:CDS | 35.0% |
!! | GAGCGGTTTAAAATTTTCAC+AGG | - | chr7_2:71831104-71831123 | Msa1074110:intron | 35.0% |
AAGAAATCAGGACGCATTAT+TGG | - | chr7_2:71831455-71831474 | Msa1074110:intron | 35.0% | |
ATCATAGGATGTACCCTTTA+CGG | + | chr7_2:71831526-71831545 | None:intergenic | 35.0% | |
TCACTATGTATTCTTTCGCA+CGG | + | chr7_2:71831671-71831690 | None:intergenic | 35.0% | |
AAATGGGAACAATTCATGCT+GGG | - | chr7_2:71831727-71831746 | Msa1074110:intron | 35.0% | |
! | CAGCTTCTAAGAGAAAACTT+AGG | - | chr7_2:71832053-71832072 | Msa1074110:intron | 35.0% |
! | CTTCTAAGAGAAAACTTAGG+TGG | - | chr7_2:71832056-71832075 | Msa1074110:intron | 35.0% |
CTAAAGCAAATACTGTTGGA+TGG | + | chr7_2:71832133-71832152 | None:intergenic | 35.0% | |
ATCTTGACAGCATTGTGTTA+GGG | + | chr7_2:71832175-71832194 | None:intergenic | 35.0% | |
!! | CACAACTCTAGAATAAAGAC+CGG | - | chr7_2:71832331-71832350 | Msa1074110:intron | 35.0% |
!! | ACAACTCTAGAATAAAGACC+GGG | - | chr7_2:71832332-71832351 | Msa1074110:intron | 35.0% |
!!! | AGGTTGAGTTTTGAGAGAAA+AGG | - | chr7_2:71832455-71832474 | Msa1074110:intron | 35.0% |
CGTCATCAATTCTATGGAAT+TGG | + | chr7_2:71832950-71832969 | None:intergenic | 35.0% | |
AACCATTAGGAACTCATACA+AGG | - | chr7_2:71833495-71833514 | Msa1074110:CDS | 35.0% | |
ATCCTTGTATGAGTTCCTAA+TGG | + | chr7_2:71833500-71833519 | None:intergenic | 35.0% | |
!!! | CGAGTACTGTTTTGTTTCAA+GGG | + | chr7_2:71833594-71833613 | None:intergenic | 35.0% |
!!! | ACGAGTACTGTTTTGTTTCA+AGG | + | chr7_2:71833595-71833614 | None:intergenic | 35.0% |
AAACCCTAGAGAGAGAAACT+CGG | - | chr7_2:71829299-71829318 | Msa1074110:three_prime_UTR | 40.0% | |
TTTCCGAGTTTCTCTCTCTA+GGG | + | chr7_2:71829305-71829324 | None:intergenic | 40.0% | |
AGAAGACGAGAGAAAATCAC+CGG | + | chr7_2:71829577-71829596 | None:intergenic | 40.0% | |
! | GATTTTCTCTCGTCTTCTCT+CGG | - | chr7_2:71829579-71829598 | Msa1074110:intron | 40.0% |
! | TATGGCTGAGAGGTTAGTTA+GGG | - | chr7_2:71829668-71829687 | Msa1074110:intron | 40.0% |
TGTACTTCACAGATAAGCAC+AGG | + | chr7_2:71829988-71830007 | None:intergenic | 40.0% | |
TGTTATCATTGTGGACGTGT+CGG | + | chr7_2:71830019-71830038 | None:intergenic | 40.0% | |
AGCATCTATTGTTGTGGTTG+TGG | - | chr7_2:71830118-71830137 | Msa1074110:intron | 40.0% | |
AAAACCGGAAAAAAGAGAGG+AGG | - | chr7_2:71830256-71830275 | Msa1074110:intron | 40.0% | |
!!! | ACTTCCTCCTCTCTTTTTTC+CGG | + | chr7_2:71830263-71830282 | None:intergenic | 40.0% |
AATGTTATCTTGTGCCCTCA+AGG | - | chr7_2:71830300-71830319 | Msa1074110:intron | 40.0% | |
!!! | GCTTTTTAACTTGTGCCTTG+AGG | + | chr7_2:71830318-71830337 | None:intergenic | 40.0% |
ATTCTTAACATGTGCCCTGA+GGG | - | chr7_2:71830439-71830458 | Msa1074110:intron | 40.0% | |
AAGATAAGATTTCGCCCTCA+GGG | + | chr7_2:71830456-71830475 | None:intergenic | 40.0% | |
AAAGATAAGATTTCGCCCTC+AGG | + | chr7_2:71830457-71830476 | None:intergenic | 40.0% | |
ATTCTTAACATGTGCCCTGA+GGG | - | chr7_2:71830439-71830458 | Msa1074110:intron | 40.0% | |
AAAGTACAGAGGATACGGTT+GGG | + | chr7_2:71830733-71830752 | None:intergenic | 40.0% | |
CAGCCGTATCATAAACGTAT+CGG | - | chr7_2:71830754-71830773 | Msa1074110:intron | 40.0% | |
TACGTGTTTGATAAGTTCCC+GGG | + | chr7_2:71830821-71830840 | None:intergenic | 40.0% | |
!!! | TTGGCATTTTTTGGAGTAGC+GGG | - | chr7_2:71830874-71830893 | Msa1074110:intron | 40.0% |
!!! | TGCAGTCTCTCTCTCTTTTT+TGG | + | chr7_2:71830951-71830970 | None:intergenic | 40.0% |
TGAGAATGGTGTAGAAGTTC+TGG | - | chr7_2:71831046-71831065 | Msa1074110:CDS | 40.0% | |
GAGAATGGTGTAGAAGTTCT+GGG | - | chr7_2:71831047-71831066 | Msa1074110:CDS | 40.0% | |
ATGCTATCTGACAGAGAAGA+AGG | - | chr7_2:71831200-71831219 | Msa1074110:intron | 40.0% | |
TGCTATCTGACAGAGAAGAA+GGG | - | chr7_2:71831201-71831220 | Msa1074110:intron | 40.0% | |
TTGAAGATCAGAAGTCTAGC+AGG | - | chr7_2:71831430-71831449 | Msa1074110:intron | 40.0% | |
TGAAGATCAGAAGTCTAGCA+GGG | - | chr7_2:71831431-71831450 | Msa1074110:intron | 40.0% | |
CAGTGAAGCTCATGTATACA+GGG | + | chr7_2:71831584-71831603 | None:intergenic | 40.0% | |
TCAGTGAAGCTCATGTATAC+AGG | + | chr7_2:71831585-71831604 | None:intergenic | 40.0% | |
! | GAAATTTGCTCGATTGCCAA+TGG | - | chr7_2:71831624-71831643 | Msa1074110:intron | 40.0% |
CATAGTGAAACAACTGGGTT+TGG | - | chr7_2:71831683-71831702 | Msa1074110:intron | 40.0% | |
AAACAACTGGGTTTGGAGAA+TGG | - | chr7_2:71831690-71831709 | Msa1074110:intron | 40.0% | |
GAAATGGGAACAATTCATGC+TGG | - | chr7_2:71831726-71831745 | Msa1074110:intron | 40.0% | |
AATGGGAACAATTCATGCTG+GGG | - | chr7_2:71831728-71831747 | Msa1074110:intron | 40.0% | |
AATTCATGCTGGGGACTTTA+TGG | - | chr7_2:71831737-71831756 | Msa1074110:intron | 40.0% | |
GATCTTGACAGCATTGTGTT+AGG | + | chr7_2:71832176-71832195 | None:intergenic | 40.0% | |
TCAAGATCAAGATCCTACCT+AGG | - | chr7_2:71832188-71832207 | Msa1074110:intron | 40.0% | |
ATCAAGATCCTACCTAGGAT+GGG | - | chr7_2:71832193-71832212 | Msa1074110:intron | 40.0% | |
!! | CCATTCACTCTCACTTTTGA+AGG | + | chr7_2:71832364-71832383 | None:intergenic | 40.0% |
CCTTCAAAAGTGAGAGTGAA+TGG | - | chr7_2:71832361-71832380 | Msa1074110:intron | 40.0% | |
AGATGTACTCAGGTCATTGA+TGG | + | chr7_2:71832420-71832439 | None:intergenic | 40.0% | |
AGTTGTTCAAACTCATAGGC+TGG | + | chr7_2:71832527-71832546 | None:intergenic | 40.0% | |
!! | CTGTTAAATTTGGTGGTGTC+TGG | - | chr7_2:71832569-71832588 | Msa1074110:intron | 40.0% |
AATTGATATGGGACTTCTCC+TGG | + | chr7_2:71832758-71832777 | None:intergenic | 40.0% | |
ACTGCTGCAGCAATTGATAT+GGG | + | chr7_2:71832769-71832788 | None:intergenic | 40.0% | |
AACTGCTGCAGCAATTGATA+TGG | + | chr7_2:71832770-71832789 | None:intergenic | 40.0% | |
CTTCAACAGGATTTGAACTG+TGG | - | chr7_2:71833181-71833200 | Msa1074110:intron | 40.0% | |
! | GTGGATCTGTCATTTGCAAA+AGG | - | chr7_2:71833200-71833219 | Msa1074110:intron | 40.0% |
GCAGATATATCAGTTGCTAC+AGG | - | chr7_2:71833460-71833479 | Msa1074110:CDS | 40.0% | |
AATACCAAACTGGTATGCGA+AGG | - | chr7_2:71833543-71833562 | Msa1074110:CDS | 40.0% | |
!! | TTTTGTTTCAAGGGCTGCAA+AGG | + | chr7_2:71833585-71833604 | None:intergenic | 40.0% |
AGCCTCCTCATTCAAGTATT+TGG | - | chr7_2:71833738-71833757 | Msa1074110:five_prime_UTR | 40.0% | |
GCCTCCTCATTCAAGTATTT+GGG | - | chr7_2:71833739-71833758 | Msa1074110:five_prime_UTR | 40.0% | |
CCTCCTCATTCAAGTATTTG+GGG | - | chr7_2:71833740-71833759 | Msa1074110:five_prime_UTR | 40.0% | |
CTCCTCATTCAAGTATTTGG+GGG | - | chr7_2:71833741-71833760 | Msa1074110:five_prime_UTR | 40.0% | |
! | GAGCGTTTGAAATGAAACGG+AGG | + | chr7_2:71829160-71829179 | None:intergenic | 45.0% |
GTTTCCGAGTTTCTCTCTCT+AGG | + | chr7_2:71829306-71829325 | None:intergenic | 45.0% | |
ACCGTCATTGCTAAGCCTAA+CGG | - | chr7_2:71829546-71829565 | Msa1074110:intron | 45.0% | |
ACCGTTAGGCTTAGCAATGA+CGG | + | chr7_2:71829550-71829569 | None:intergenic | 45.0% | |
CTATTGGTACTATGGCTGAG+AGG | - | chr7_2:71829658-71829677 | Msa1074110:intron | 45.0% | |
! | CTATGGCTGAGAGGTTAGTT+AGG | - | chr7_2:71829667-71829686 | Msa1074110:intron | 45.0% |
TATTGTTGTGGTTGTGGCTG+TGG | - | chr7_2:71830124-71830143 | Msa1074110:intron | 45.0% | |
GATTCTTAACATGTGCCCTG+AGG | - | chr7_2:71830438-71830457 | Msa1074110:intron | 45.0% | |
GATTCTTAACATGTGCCCTG+AGG | - | chr7_2:71830438-71830457 | Msa1074110:intron | 45.0% | |
!! | AGTGTTAACTTGTGCCCTCA+GGG | + | chr7_2:71830529-71830548 | None:intergenic | 45.0% |
!! | TAGTGTTAACTTGTGCCCTC+AGG | + | chr7_2:71830530-71830549 | None:intergenic | 45.0% |
ACCAAAGGTGAGAAAGAGAG+CGG | - | chr7_2:71830563-71830582 | Msa1074110:intron | 45.0% | |
! | GAGAAAGAGAGCGGTGTTAA+CGG | - | chr7_2:71830572-71830591 | Msa1074110:intron | 45.0% |
! | GAAAGTACAGAGGATACGGT+TGG | + | chr7_2:71830734-71830753 | None:intergenic | 45.0% |
! | GCTGGAAAGTACAGAGGATA+CGG | + | chr7_2:71830738-71830757 | None:intergenic | 45.0% |
CGATACGTTTATGATACGGC+TGG | + | chr7_2:71830756-71830775 | None:intergenic | 45.0% | |
! | CTGCAATGCTTCTTTTGACG+TGG | - | chr7_2:71830966-71830985 | Msa1074110:intron | 45.0% |
GAAGATCAGAAGTCTAGCAG+GGG | - | chr7_2:71831432-71831451 | Msa1074110:intron | 45.0% | |
CTTGTCGACAAGCAATGTAG+AGG | + | chr7_2:71831488-71831507 | None:intergenic | 45.0% | |
TACATGAGCTTCACTGAACC+TGG | - | chr7_2:71831588-71831607 | Msa1074110:intron | 45.0% | |
TGGCGGTCAATCTGTTGAAA+TGG | - | chr7_2:71831710-71831729 | Msa1074110:intron | 45.0% | |
GGCGGTCAATCTGTTGAAAT+GGG | - | chr7_2:71831711-71831730 | Msa1074110:intron | 45.0% | |
TCAAGCTGTTAAAGCTGCTC+AGG | - | chr7_2:71831924-71831943 | Msa1074110:intron | 45.0% | |
GTGGCAAAAGTGAGAACTCT+GGG | - | chr7_2:71832075-71832094 | Msa1074110:intron | 45.0% | |
AAAAGTGAGAACTCTGGGCT+GGG | - | chr7_2:71832080-71832099 | Msa1074110:intron | 45.0% | |
GATCAAGATCCTACCTAGGA+TGG | - | chr7_2:71832192-71832211 | Msa1074110:intron | 45.0% | |
TCAAGATCCTACCTAGGATG+GGG | - | chr7_2:71832194-71832213 | Msa1074110:intron | 45.0% | |
!! | ACTCTAGAATAAAGACCGGG+TGG | - | chr7_2:71832335-71832354 | Msa1074110:intron | 45.0% |
!! | CACTTTTGAAGGATTCCACC+CGG | + | chr7_2:71832353-71832372 | None:intergenic | 45.0% |
AACTGTCACAGACCTTTGAG+AGG | + | chr7_2:71832829-71832848 | None:intergenic | 45.0% | |
! | TTCTAAAAGTGGTGGGAGTG+TGG | - | chr7_2:71833008-71833027 | Msa1074110:intron | 45.0% |
ATATATTGCACCCAGTTCGG+TGG | - | chr7_2:71833056-71833075 | Msa1074110:intron | 45.0% | |
ACAATTATCGCCACCGAACT+GGG | + | chr7_2:71833069-71833088 | None:intergenic | 45.0% | |
AACAATTATCGCCACCGAAC+TGG | + | chr7_2:71833070-71833089 | None:intergenic | 45.0% | |
GAGTTGCAGAAGGAACCATT+AGG | - | chr7_2:71833482-71833501 | Msa1074110:CDS | 45.0% | |
TCTTCCTTCGCATACCAGTT+TGG | + | chr7_2:71833550-71833569 | None:intergenic | 45.0% | |
AAACTGGTATGCGAAGGAAG+AGG | - | chr7_2:71833549-71833568 | Msa1074110:CDS | 45.0% | |
CCCCAAATACTTGAATGAGG+AGG | + | chr7_2:71833743-71833762 | None:intergenic | 45.0% | |
CTCCCCCAAATACTTGAATG+AGG | + | chr7_2:71833746-71833765 | None:intergenic | 45.0% | |
TTCAAGTATTTGGGGGAGAC+TGG | - | chr7_2:71833748-71833767 | Msa1074110:five_prime_UTR | 45.0% | |
! | CTTTTCATCAAGGTCTAGCG+AGG | + | chr7_2:71833809-71833828 | None:intergenic | 45.0% |
CGAACCTTCGCTAACGAATC+CGG | - | chr7_2:71829459-71829478 | Msa1074110:CDS | 50.0% | |
ATCACCGGATTCGTTAGCGA+AGG | + | chr7_2:71829466-71829485 | None:intergenic | 50.0% | |
ACGAACGGGATCGTTATCAC+CGG | + | chr7_2:71829481-71829500 | None:intergenic | 50.0% | |
GATAACGATCCCGTTCGTGT+CGG | - | chr7_2:71829483-71829502 | Msa1074110:CDS | 50.0% | |
TCGGTAAGGAGAGGGTTACT+GGG | + | chr7_2:71829513-71829532 | None:intergenic | 50.0% | |
ATCGGTAAGGAGAGGGTTAC+TGG | + | chr7_2:71829514-71829533 | None:intergenic | 50.0% | |
AGTAACCCTCTCCTTACCGA+TGG | - | chr7_2:71829513-71829532 | Msa1074110:CDS | 50.0% | |
GTTAGGCTTAGCAATGACGG+TGG | + | chr7_2:71829547-71829566 | None:intergenic | 50.0% | |
!! | AAATCACCGGAAGCACCGTT+AGG | + | chr7_2:71829564-71829583 | None:intergenic | 50.0% |
GCAAGGATCAATCCACGATC+GGG | + | chr7_2:71829630-71829649 | None:intergenic | 50.0% | |
CGCAAGGATCAATCCACGAT+CGG | + | chr7_2:71829631-71829650 | None:intergenic | 50.0% | |
ACCGCTCTCTTTCTCACCTT+TGG | + | chr7_2:71830567-71830586 | None:intergenic | 50.0% | |
! | AAAGAGAGCGGTGTTAACGG+AGG | - | chr7_2:71830575-71830594 | Msa1074110:intron | 50.0% |
TAACGGAGGAGAGGGTTATG+TGG | - | chr7_2:71830589-71830608 | Msa1074110:intron | 50.0% | |
GAGGAGAGGGTTATGTGGAA+CGG | - | chr7_2:71830594-71830613 | Msa1074110:intron | 50.0% | |
AGAGGGTTATGTGGAACGGA+TGG | - | chr7_2:71830598-71830617 | Msa1074110:intron | 50.0% | |
ACGGGATACGCAAAATGGCA+CGG | + | chr7_2:71830696-71830715 | None:intergenic | 50.0% | |
TACGCACGGGATACGCAAAA+TGG | + | chr7_2:71830701-71830720 | None:intergenic | 50.0% | |
TTGGGTGCATCTGATACGCA+CGG | + | chr7_2:71830715-71830734 | None:intergenic | 50.0% | |
! | GATACGGCTGGAAAGTACAG+AGG | + | chr7_2:71830744-71830763 | None:intergenic | 50.0% |
!! | TTGGTGTCGGATACGTGTCA+TGG | - | chr7_2:71830841-71830860 | Msa1074110:intron | 50.0% |
!! | GTGTCATGGCACCGATACTT+TGG | - | chr7_2:71830855-71830874 | Msa1074110:intron | 50.0% |
CAGCATGCTTGACAGATCAG+AGG | + | chr7_2:71831248-71831267 | None:intergenic | 50.0% | |
GTCTAGCAGGGGAAGAAATC+AGG | - | chr7_2:71831443-71831462 | Msa1074110:intron | 50.0% | |
AGACAAGCCACGAACCGTAA+AGG | - | chr7_2:71831509-71831528 | Msa1074110:CDS | 50.0% | |
GACAAGCCACGAACCGTAAA+GGG | - | chr7_2:71831510-71831529 | Msa1074110:CDS | 50.0% | |
GATGTACCCTTTACGGTTCG+TGG | + | chr7_2:71831519-71831538 | None:intergenic | 50.0% | |
! | TTCCTTCTTGGTGGCTCCAT+TGG | + | chr7_2:71831643-71831662 | None:intergenic | 50.0% |
GGAGCCACCAAGAAGGAAAT+TGG | - | chr7_2:71831645-71831664 | Msa1074110:intron | 50.0% | |
ACGGCCAATTTCCTTCTTGG+TGG | + | chr7_2:71831652-71831671 | None:intergenic | 50.0% | |
CAACTGGGTTTGGAGAATGG+CGG | - | chr7_2:71831693-71831712 | Msa1074110:intron | 50.0% | |
TGCGCTATATGACAAGCCAG+TGG | + | chr7_2:71832035-71832054 | None:intergenic | 50.0% | |
GGTGGCAAAAGTGAGAACTC+TGG | - | chr7_2:71832074-71832093 | Msa1074110:intron | 50.0% | |
CAAAAGTGAGAACTCTGGGC+TGG | - | chr7_2:71832079-71832098 | Msa1074110:intron | 50.0% | |
TGACCTGAGTACATCTACGC+AGG | - | chr7_2:71832424-71832443 | Msa1074110:intron | 50.0% | |
AGTCCTGCGTAGATGTACTC+AGG | + | chr7_2:71832430-71832449 | None:intergenic | 50.0% | |
AGAGGGTCTGTGACAGTTCT+TGG | - | chr7_2:71832869-71832888 | Msa1074110:intron | 50.0% | |
GTTGCTACAGGAGTTGCAGA+AGG | - | chr7_2:71833472-71833491 | Msa1074110:CDS | 50.0% | |
! | ATTGGGGCACCTTTGTTGTC+TGG | - | chr7_2:71833859-71833878 | Msa1074110:five_prime_UTR | 50.0% |
GCTGCAAAACGCATCGGACA+TGG | + | chr7_2:71829328-71829347 | None:intergenic | 55.0% | |
GCAGTCGCTGCAAAACGCAT+CGG | + | chr7_2:71829334-71829353 | None:intergenic | 55.0% | |
GATGCAGTCTGTTCGGAGTG+TGG | - | chr7_2:71829393-71829412 | Msa1074110:exon | 55.0% | |
TTCGGAGTGTGGTCTCGTCT+TGG | - | chr7_2:71829404-71829423 | Msa1074110:exon | 55.0% | |
CCACTCGGAGGTTTCATCGA+TGG | + | chr7_2:71829439-71829458 | None:intergenic | 55.0% | |
CCATCGATGAAACCTCCGAG+TGG | - | chr7_2:71829436-71829455 | Msa1074110:CDS | 55.0% | |
GTTAGCGAAGGTTCGCCACT+CGG | + | chr7_2:71829454-71829473 | None:intergenic | 55.0% | |
AACCCTCTCCTTACCGATGG+TGG | - | chr7_2:71829516-71829535 | Msa1074110:CDS | 55.0% | |
GACCACCATCGGTAAGGAGA+GGG | + | chr7_2:71829521-71829540 | None:intergenic | 55.0% | |
AGACCACCATCGGTAAGGAG+AGG | + | chr7_2:71829522-71829541 | None:intergenic | 55.0% | |
TGGAGAGACCACCATCGGTA+AGG | + | chr7_2:71829527-71829546 | None:intergenic | 55.0% | |
GCTAAGCCTAACGGTGCTTC+CGG | - | chr7_2:71829555-71829574 | Msa1074110:intron | 55.0% | |
TCTCGTCTTCTCTCGGTCGT+TGG | - | chr7_2:71829586-71829605 | Msa1074110:intron | 55.0% | |
!! | CGTGGTTCTAATCCCGATCG+TGG | - | chr7_2:71829615-71829634 | Msa1074110:intron | 55.0% |
!! | GGGACTGGTTCCGACCATTA+AGG | - | chr7_2:71829878-71829897 | Msa1074110:intron | 55.0% |
! | AGCGGTGTTAACGGAGGAGA+GGG | - | chr7_2:71830581-71830600 | Msa1074110:intron | 55.0% |
CGGGATACGCAAAATGGCAC+GGG | + | chr7_2:71830695-71830714 | None:intergenic | 55.0% | |
TGGGTGCATCTGATACGCAC+GGG | + | chr7_2:71830714-71830733 | None:intergenic | 55.0% | |
TGCCAATGGAGCCACCAAGA+AGG | - | chr7_2:71831638-71831657 | Msa1074110:intron | 55.0% | |
CGCACGGCCAATTTCCTTCT+TGG | + | chr7_2:71831655-71831674 | None:intergenic | 55.0% | |
! | TGAGAACTCTGGGCTGGGTA+GGG | - | chr7_2:71832085-71832104 | Msa1074110:intron | 55.0% |
GTACATCTACGCAGGACTGC+AGG | - | chr7_2:71832432-71832451 | Msa1074110:intron | 55.0% | |
ATTTGGGGGAGACTGGAGAG+TGG | - | chr7_2:71833755-71833774 | Msa1074110:five_prime_UTR | 55.0% | |
CTCCGAACAGACTGCATCGC+CGG | + | chr7_2:71829391-71829410 | None:intergenic | 60.0% | |
AACGATCCCGTTCGTGTCGG+TGG | - | chr7_2:71829486-71829505 | Msa1074110:CDS | 60.0% | |
ACTGGGACCACCGACACGAA+CGG | + | chr7_2:71829496-71829515 | None:intergenic | 60.0% | |
GACGGTGGAGAGACCACCAT+CGG | + | chr7_2:71829532-71829551 | None:intergenic | 60.0% | |
CTCGGTCGTTGGCAGAATCG+TGG | - | chr7_2:71829597-71829616 | Msa1074110:intron | 60.0% | |
! | GAGCGGTGTTAACGGAGGAG+AGG | - | chr7_2:71830580-71830599 | Msa1074110:intron | 60.0% |
AATGGCACGGGAACACAGCG+CGG | + | chr7_2:71830683-71830702 | None:intergenic | 60.0% | |
! | GTGAGAACTCTGGGCTGGGT+AGG | - | chr7_2:71832084-71832103 | Msa1074110:intron | 60.0% |
ATCCTACCTAGGATGGGGCG+TGG | - | chr7_2:71832199-71832218 | Msa1074110:intron | 60.0% | |
TCCTACCTAGGATGGGGCGT+GGG | - | chr7_2:71832200-71832219 | Msa1074110:intron | 60.0% | |
AAAAGCCCACGCCCCATCCT+AGG | + | chr7_2:71832208-71832227 | None:intergenic | 60.0% | |
CATCTACGCAGGACTGCAGG+AGG | - | chr7_2:71832435-71832454 | Msa1074110:intron | 60.0% | |
CAGCGACTGCAAGCGAGCGA+CGG | - | chr7_2:71829344-71829363 | Msa1074110:three_prime_UTR | 65.0% | |
GTGGTGTTCGACCACTCCGC+CGG | - | chr7_2:71829369-71829388 | Msa1074110:three_prime_UTR | 65.0% | |
CGAACAGACTGCATCGCCGG+CGG | + | chr7_2:71829388-71829407 | None:intergenic | 65.0% | |
CGCCGGCGATGCAGTCTGTT+CGG | - | chr7_2:71829386-71829405 | Msa1074110:three_prime_UTR | 65.0% | |
AGCGAAGGTTCGCCACTCGG+AGG | + | chr7_2:71829451-71829470 | None:intergenic | 65.0% | |
CTGGGACCACCGACACGAAC+GGG | + | chr7_2:71829495-71829514 | None:intergenic | 65.0% | |
GGGGAGACTGGAGAGTGGAG+AGG | - | chr7_2:71833760-71833779 | Msa1074110:five_prime_UTR | 65.0% | |
CGACTGCAAGCGAGCGACGG+AGG | - | chr7_2:71829347-71829366 | Msa1074110:three_prime_UTR | 70.0% | |
CTGCAAGCGAGCGACGGAGG+TGG | - | chr7_2:71829350-71829369 | Msa1074110:three_prime_UTR | 70.0% | |
AGACTGCATCGCCGGCGGAG+TGG | + | chr7_2:71829383-71829402 | None:intergenic | 70.0% | |
GCCCACGCCCCATCCTAGGT+AGG | + | chr7_2:71832204-71832223 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 71829119 | 71833884 | 71829119 | ID=Msa1074110;Name=Msa1074110 |
chr7_2 | mRNA | 71829119 | 71833884 | 71829119 | ID=Msa1074110-mRNA-1;Parent=Msa1074110;Name=Msa1074110-mRNA-1;_AED=0.07;_eAED=0.07;_QI=208|1|1|1|1|1|7|287|313 |
chr7_2 | exon | 71829119 | 71829539 | 71829119 | ID=Msa1074110-mRNA-1:exon:16395;Parent=Msa1074110-mRNA-1 |
chr7_2 | exon | 71830168 | 71830244 | 71830168 | ID=Msa1074110-mRNA-1:exon:16394;Parent=Msa1074110-mRNA-1 |
chr7_2 | exon | 71831023 | 71831111 | 71831023 | ID=Msa1074110-mRNA-1:exon:16393;Parent=Msa1074110-mRNA-1 |
chr7_2 | exon | 71831245 | 71831378 | 71831245 | ID=Msa1074110-mRNA-1:exon:16392;Parent=Msa1074110-mRNA-1 |
chr7_2 | exon | 71831472 | 71831601 | 71831472 | ID=Msa1074110-mRNA-1:exon:16391;Parent=Msa1074110-mRNA-1 |
chr7_2 | exon | 71833104 | 71833128 | 71833104 | ID=Msa1074110-mRNA-1:exon:16390;Parent=Msa1074110-mRNA-1 |
chr7_2 | exon | 71833324 | 71833884 | 71833324 | ID=Msa1074110-mRNA-1:exon:16389;Parent=Msa1074110-mRNA-1 |
chr7_2 | five_prime_UTR | 71833677 | 71833884 | 71833677 | ID=Msa1074110-mRNA-1:five_prime_utr;Parent=Msa1074110-mRNA-1 |
chr7_2 | CDS | 71833324 | 71833676 | 71833324 | ID=Msa1074110-mRNA-1:cds;Parent=Msa1074110-mRNA-1 |
chr7_2 | CDS | 71833104 | 71833128 | 71833104 | ID=Msa1074110-mRNA-1:cds;Parent=Msa1074110-mRNA-1 |
chr7_2 | CDS | 71831472 | 71831601 | 71831472 | ID=Msa1074110-mRNA-1:cds;Parent=Msa1074110-mRNA-1 |
chr7_2 | CDS | 71831245 | 71831378 | 71831245 | ID=Msa1074110-mRNA-1:cds;Parent=Msa1074110-mRNA-1 |
chr7_2 | CDS | 71831023 | 71831111 | 71831023 | ID=Msa1074110-mRNA-1:cds;Parent=Msa1074110-mRNA-1 |
chr7_2 | CDS | 71830168 | 71830244 | 71830168 | ID=Msa1074110-mRNA-1:cds;Parent=Msa1074110-mRNA-1 |
chr7_2 | CDS | 71829406 | 71829539 | 71829406 | ID=Msa1074110-mRNA-1:cds;Parent=Msa1074110-mRNA-1 |
chr7_2 | three_prime_UTR | 71829119 | 71829405 | 71829119 | ID=Msa1074110-mRNA-1:three_prime_utr;Parent=Msa1074110-mRNA-1 |
Gene Sequence |
Protein sequence |