AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0227450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0227450 MtrunA17_Chr2g0276741 98.452 1098 11 1 1 1098 1 1092 0.0 2220
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0227450 AT5G49810.1 71.350 1089 286 7 7 1095 6 1068 0.0 1605

Find 267 sgRNAs with CRISPR-Local

Find 780 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAATTATGATCTTTAATA+TGG 0.140051 2_1:+78556418 Msa0227450:CDS
GAATTCTTTATGGGGCTTTC+TGG 0.151633 2_1:+78556665 Msa0227450:CDS
CTCAATGGTGTTCTCAGATT+TGG 0.158728 2_1:+78563718 Msa0227450:CDS
AACCCATGGGTGTATATTTC+TGG 0.185448 2_1:+78563463 Msa0227450:CDS
TCGTATTGAAGACATCTTAT+TGG 0.201428 2_1:+78554549 Msa0227450:CDS
GCAAGTATAGTAAAGTAAAA+TGG 0.212959 2_1:+78554327 Msa0227450:exon
TTTAAGGAATAAGGAAAGTT+TGG 0.213704 2_1:+78564447 Msa0227450:three_prime_UTR
AACAATTCTGTCCTTGAAAA+TGG 0.237075 2_1:-78554762 None:intergenic
TCATTCATGGTGTGAGGTTT+AGG 0.247285 2_1:+78564613 Msa0227450:three_prime_UTR
GGAGTCCTGAAGTATCTTTC+AGG 0.257655 2_1:+78559901 Msa0227450:CDS
AGGCTGGGGTGGCTGGGATT+TGG 0.274445 2_1:+78563615 Msa0227450:CDS
AAATCATTTCTTCAGGTCTA+TGG 0.277256 2_1:+78554916 Msa0227450:intron
GCACGGACAGCTTGGGCTTA+TGG 0.281230 2_1:+78556704 Msa0227450:CDS
TTCTAGTAACTCAACAGTTT+TGG 0.282056 2_1:-78560152 None:intergenic
TTAGTCATTGCATCTGGATT+TGG 0.284974 2_1:-78555973 None:intergenic
ATCTGATATACAAGTATTCT+TGG 0.287489 2_1:+78564393 Msa0227450:three_prime_UTR
CGCTTCCGCAATCTCATTGC+TGG 0.289657 2_1:+78557057 Msa0227450:CDS
CTGGGGTGGCTGGGATTTGG+AGG 0.291490 2_1:+78563618 Msa0227450:CDS
TTTGAGCTATCCAGCCTTCC+AGG 0.295362 2_1:+78559871 Msa0227450:CDS
ACAGTAAAGGCTGGGGTGGC+TGG 0.304121 2_1:+78563608 Msa0227450:CDS
CAGGCAGTGGTTAACATCTT+TGG 0.305985 2_1:+78558794 Msa0227450:CDS
TCAATGGTGTTCTCAGATTT+GGG 0.308130 2_1:+78563719 Msa0227450:CDS
CATCTAAAGCATTCAAGTAT+AGG 0.308855 2_1:-78554981 None:intergenic
AGATGTCTTCAATACGAAAA+TGG 0.316126 2_1:-78554543 None:intergenic
AAAGTGAAGGACCAGTCTTC+AGG 0.316653 2_1:-78554710 None:intergenic
TTAATCAGTCAGTACTATTA+TGG 0.318078 2_1:+78560187 Msa0227450:CDS
ATGTTTCTGTAATTCATTCA+TGG 0.320383 2_1:+78564600 Msa0227450:three_prime_UTR
CGGTGGTTCATATGGAAAAT+AGG 0.325716 2_1:-78557022 None:intergenic
TTGGCAAACTAAAATCATTC+AGG 0.327982 2_1:+78556508 Msa0227450:CDS
GAGTAATTATTGTGCACTTC+AGG 0.330199 2_1:+78556038 Msa0227450:CDS
GGCTCTTGGACTGGAATTCC+TGG 0.330547 2_1:+78564269 Msa0227450:CDS
CAAAAGATTGTTTGAGCGTC+GGG 0.343813 2_1:+78556466 Msa0227450:CDS
CTAGAGCTGTCAAAATTTCC+TGG 0.344264 2_1:+78554953 Msa0227450:CDS
TGATACTTCATCCTCTGGTT+TGG 0.344328 2_1:+78563579 Msa0227450:CDS
ACAAAAGCTACTTCTAAATC+TGG 0.347500 2_1:-78560094 None:intergenic
GTTTATAGCAACAAGGAGAT+AGG 0.349832 2_1:+78563511 Msa0227450:CDS
TTTCTTCTCCTCGTCATAGA+TGG 0.350985 2_1:-78555016 None:intergenic
AATTCCATTATCTCTGCAAT+AGG 0.353870 2_1:-78555082 None:intergenic
GACAGAATTGTTTCTGAGTT+AGG 0.356791 2_1:+78554773 Msa0227450:CDS
CTTCCAGCCGGTGGTTCATA+TGG 0.357915 2_1:-78557030 None:intergenic
GTGGAGGACCAGTTTGGGTT+AGG 0.358252 2_1:+78556347 Msa0227450:CDS
CAATTAAACCTAACCCAAAC+TGG 0.361276 2_1:-78556355 None:intergenic
AGCTCGACGACTCAAATATT+AGG 0.363902 2_1:+78564207 Msa0227450:CDS
TATTCTTAACCAGTTGGGTT+TGG 0.365012 2_1:+78563747 Msa0227450:CDS
CTATCCTATTGCAGAGATAA+TGG 0.366988 2_1:+78555078 Msa0227450:CDS
GATCAACATCCATGTGGATC+AGG 0.374782 2_1:-78563072 None:intergenic
CAAGCTGTCCGTGCACAAAT+AGG 0.378108 2_1:-78556695 None:intergenic
ATTCAACTTGAAAGAATTGT+AGG 0.380322 2_1:+78555102 Msa0227450:CDS
TTAAGGAATAAGGAAAGTTT+GGG 0.380717 2_1:+78564448 Msa0227450:three_prime_UTR
TTGAGTACCTGTGCTAGATT+TGG 0.380846 2_1:+78563541 Msa0227450:CDS
TTTCTTATTCTTAACCAGTT+GGG 0.384297 2_1:+78563742 Msa0227450:CDS
GTTCTTCTCAATTTCAACTA+AGG 0.386993 2_1:-78556627 None:intergenic
TGCCGCACTCAGATCATTGC+TGG 0.387328 2_1:+78554414 Msa0227450:CDS
GGTGAACAACCGACCTGGTT+AGG 0.393025 2_1:-78556785 None:intergenic
ATCATCTTAGTCATTGCATC+TGG 0.395798 2_1:-78555979 None:intergenic
TCAAGAGATCAGCAGTTCTC+TGG 0.403974 2_1:+78556918 Msa0227450:CDS
GCAATTGACGGGGTAGATAA+TGG 0.404074 2_1:+78563046 Msa0227450:CDS
GCCTGTTCCATCTCCTGTCA+AGG 0.406059 2_1:+78563105 Msa0227450:CDS
CTGCAGAAGTGCTCGCAATC+TGG 0.407281 2_1:+78554379 Msa0227450:CDS
CACTGGCAGTGAGTGGAATA+TGG 0.407811 2_1:-78557098 None:intergenic
TTTCCACAGTGGCATTTCCT+TGG 0.411782 2_1:-78564181 None:intergenic
GCTGGAGGGTCTTGAGGATC+TGG 0.414778 2_1:+78554432 Msa0227450:CDS
TTAAAGATCATAATTCCATT+TGG 0.417333 2_1:-78556413 None:intergenic
CTGTCCTTGAAAATGGAGTC+AGG 0.426113 2_1:-78554755 None:intergenic
TCAATAGCCGCATTCCTTGA+AGG 0.426604 2_1:-78558705 None:intergenic
ATAATTGATACTTCATCCTC+TGG 0.436360 2_1:+78563574 Msa0227450:CDS
AGAAGAAAACTTTGTTGGAC+AGG 0.436905 2_1:+78555031 Msa0227450:CDS
GTTTCTTATTCTTAACCAGT+TGG 0.437260 2_1:+78563741 Msa0227450:CDS
CGAGGAGAAGAAAACTTTGT+TGG 0.439885 2_1:+78555026 Msa0227450:CDS
CAGTAAAGGCTGGGGTGGCT+GGG 0.442647 2_1:+78563609 Msa0227450:CDS
TTTGAGATAGGCGGAAGGTT+TGG 0.443435 2_1:-78564117 None:intergenic
CTCAGAAGGTGCACGCCGGC+AGG 0.443463 2_1:-78560245 None:intergenic
TTTATAGCAACAAGGAGATA+GGG 0.443658 2_1:+78563512 Msa0227450:CDS
CAAGTATAGTAAAGTAAAAT+GGG 0.444110 2_1:+78554328 Msa0227450:exon
CAGCTCTAGGATTGATATCA+AGG 0.449801 2_1:-78554939 None:intergenic
ATATGCTGCAAAGAAGTTGC+TGG 0.450060 2_1:+78563822 Msa0227450:CDS
TCTGAGTTAGGTTGTGGAAA+TGG 0.450674 2_1:+78554785 Msa0227450:CDS
GCTTGGGCTTATGGAAAGTC+TGG 0.451869 2_1:+78556713 Msa0227450:CDS
TCCATTTGATCCTGGAAGGC+TGG 0.457000 2_1:-78559881 None:intergenic
AAGTGAAGGACCAGTCTTCA+GGG 0.457383 2_1:-78554709 None:intergenic
TTGAATGCTTTAGATGAAAA+CGG 0.458305 2_1:+78554988 Msa0227450:CDS
GCAAATAATTGCCGCATGAG+AGG 0.459019 2_1:-78559935 None:intergenic
GTCAAATCAGTTGATATGAT+AGG 0.459254 2_1:+78562980 Msa0227450:CDS
TCCAGCCTTCCAGGATCAAA+TGG 0.460211 2_1:+78559880 Msa0227450:CDS
AAGCCAGTGGGGTTGATTGT+AGG 0.461231 2_1:-78563487 None:intergenic
CTCTTCGCTTGTTCTCACCT+CGG 0.461891 2_1:+78558733 Msa0227450:CDS
CTATTTGTGCACGGACAGCT+TGG 0.467046 2_1:+78556696 Msa0227450:CDS
TGGAATTTGACAGTAAAGGC+TGG 0.467692 2_1:+78563599 Msa0227450:CDS
TTCAGGACTCCATTTGATCC+TGG 0.469284 2_1:-78559889 None:intergenic
GGAATTATGATCTTTAATAT+GGG 0.472141 2_1:+78556419 Msa0227450:CDS
TATGCATCAATAGTGGCTCT+TGG 0.472699 2_1:+78564255 Msa0227450:CDS
GACTTCCTGAAAGATACTTC+AGG 0.473070 2_1:-78559906 None:intergenic
ATGTGTCAACCAAACCCAAC+TGG 0.473413 2_1:-78563756 None:intergenic
TTCTTCTCCTCGTCATAGAT+GGG 0.473757 2_1:-78555015 None:intergenic
CTGGAATTCCTGGATATTGT+CGG 0.474289 2_1:+78564279 Msa0227450:CDS
GAAGATCCGAGCCTGGGAAC+GGG 0.476818 2_1:-78554458 None:intergenic
TAGAAATAAATTGACTATGA+TGG 0.478039 2_1:+78554667 Msa0227450:CDS
TATTTGTGCACGGACAGCTT+GGG 0.478209 2_1:+78556697 Msa0227450:CDS
TAGTTCCCATTTGATCCAGC+TGG 0.478269 2_1:-78563328 None:intergenic
GCATTGATCGCAGGAGTCCT+TGG 0.478388 2_1:-78554509 None:intergenic
AATACACTCACTGGAGTCCT+TGG 0.479553 2_1:+78563430 Msa0227450:CDS
ATCAATAGTGGCTCTTGGAC+TGG 0.479773 2_1:+78564260 Msa0227450:CDS
TTTAATATGGGAGGTCGCCC+AGG 0.479783 2_1:+78556431 Msa0227450:CDS
TAAACCTGTGGCTTCGAGAA+TGG 0.481541 2_1:-78564234 None:intergenic
AAAACTGTTGAGTTACTAGA+AGG 0.481631 2_1:+78560154 Msa0227450:CDS
AAGCTGAAGATTTCATCAAA+AGG 0.482667 2_1:+78564149 Msa0227450:CDS
ATTGCAAGGGCAGTAGAAGA+AGG 0.482982 2_1:+78556374 Msa0227450:CDS
TAGTCAATTTATTTCTACCT+TGG 0.484836 2_1:-78554661 None:intergenic
TCTCATGCGGCAATTATTTG+CGG 0.485639 2_1:+78559937 Msa0227450:CDS
AATTACCTCCTTCAAGCACT+TGG 0.486469 2_1:-78563917 None:intergenic
AAGCCTCAAGTGGTGGTGAC+TGG 0.488007 2_1:+78559748 Msa0227450:CDS
TCATTCTCTGTGTCTCTGCT+CGG 0.490012 2_1:+78563676 Msa0227450:CDS
CTGCCGGCGTGCACCTTCTG+AGG 0.491392 2_1:+78560246 Msa0227450:CDS
ATTCAAGTATAGGTTTATCC+AGG 0.491476 2_1:-78554971 None:intergenic
AAGTAGATCCAAGTGCTTGA+AGG 0.493652 2_1:+78563909 Msa0227450:CDS
CAATGATCTGAGTGCGGCAT+AGG 0.494621 2_1:-78554410 None:intergenic
ATTGTTTCTGAGTTAGGTTG+TGG 0.497181 2_1:+78554779 Msa0227450:CDS
CAAAGATGTTAACCACTGCC+TGG 0.497338 2_1:-78558793 None:intergenic
AACTGTAAACTGATAAAGCA+TGG 0.500551 2_1:-78556748 None:intergenic
TGTAGCTTATTGAGATGTAC+TGG 0.505127 2_1:+78556577 Msa0227450:intron
GTTGCTGGAGCTTAGAGAGC+AGG 0.505418 2_1:+78563837 Msa0227450:CDS
TTGGGTTAGGTTTAATTGCA+AGG 0.509830 2_1:+78556360 Msa0227450:CDS
TTCACGGAAAATACACTCAC+TGG 0.510441 2_1:+78563421 Msa0227450:CDS
ATCATTGCTGGAGGGTCTTG+AGG 0.511231 2_1:+78554426 Msa0227450:CDS
ATGCTGAGCTAGCAATTGAC+GGG 0.511938 2_1:+78563035 Msa0227450:CDS
CAGATTGCGAGCACTTCTGC+AGG 0.512285 2_1:-78554378 None:intergenic
TTTCCATATGAACCACCGGC+TGG 0.513254 2_1:+78557027 Msa0227450:CDS
CCTGTCCTACAGATAGTACT+AGG 0.513653 2_1:-78564656 None:intergenic
GTTAACATCTTTGGCACTTG+AGG 0.514577 2_1:+78558803 Msa0227450:CDS
GAGAAAGGAAGATCCGAGCC+TGG 0.515009 2_1:-78554465 None:intergenic
AAATGATTTCAAGAAAGCAC+TGG 0.515506 2_1:+78564322 Msa0227450:CDS
TTATTGAGATGTACTGGTAC+AGG 0.517336 2_1:+78556583 Msa0227450:intron
TGCGGCAATTATTTGCGGAC+TGG 0.519683 2_1:+78559942 Msa0227450:CDS
ATATCAGTAATCAAACCAAA+TGG 0.520763 2_1:+78556398 Msa0227450:CDS
TTAGATACAACGCGAGATGT+TGG 0.521057 2_1:+78559817 Msa0227450:CDS
GCATATTTAACAGTACTATG+AGG 0.525047 2_1:-78563805 None:intergenic
AATAATTACTCAGAGAATGA+AGG 0.526386 2_1:-78556026 None:intergenic
TTGCTATAAACTAAGCCAGT+GGG 0.530370 2_1:-78563499 None:intergenic
CGGAAGCGTTTGCTTCCAGC+CGG 0.530945 2_1:-78557042 None:intergenic
ATAGCAGCCTTGACAGGAGA+TGG 0.530957 2_1:-78563112 None:intergenic
GGAATTTGACAGTAAAGGCT+GGG 0.532374 2_1:+78563600 Msa0227450:CDS
TGGAAACCCGTTCCCAGGCT+CGG 0.533105 2_1:+78554452 Msa0227450:CDS
TGTAATTCATTCATGGTGTG+AGG 0.533267 2_1:+78564607 Msa0227450:three_prime_UTR
TATAGTAAAGTAAAATGGGT+TGG 0.533644 2_1:+78554332 Msa0227450:exon
ACAGGTTTATGCATCAATAG+TGG 0.535129 2_1:+78564248 Msa0227450:CDS
CCTAGTACTATCTGTAGGAC+AGG 0.535202 2_1:+78564656 Msa0227450:three_prime_UTR
TGAGAAGTGGCTACCTTCCA+AGG 0.536986 2_1:+78554829 Msa0227450:CDS
GGCACTTGAGAAGAGCGGTT+GGG 0.537763 2_1:+78564058 Msa0227450:intron
CTATGAGGTTTACTTAATCC+CGG 0.538972 2_1:-78563790 None:intergenic
AAACAAACAAACACCTTGGA+AGG 0.542682 2_1:-78554842 None:intergenic
GCCTTGACAGGAGATGGAAC+AGG 0.543848 2_1:-78563106 None:intergenic
AGCATTATTAAGAACTGATA+CGG 0.544388 2_1:-78563017 None:intergenic
CAAATAATTGCCGCATGAGA+GGG 0.544722 2_1:-78559934 None:intergenic
AATGCCATTCTCGAAGCCAC+AGG 0.545511 2_1:+78564230 Msa0227450:CDS
AATGCTGAGCTAGCAATTGA+CGG 0.547345 2_1:+78563034 Msa0227450:CDS
AGGTAGCCACTTCTCAGCTA+TGG 0.550757 2_1:-78554822 None:intergenic
TCAACTTCGTCAACCTAACC+AGG 0.551117 2_1:+78556772 Msa0227450:CDS
AACGCTTCTGAAGGAGAGAA+AGG 0.551591 2_1:-78554480 None:intergenic
GCAAAAGATTGTTTGAGCGT+CGG 0.551831 2_1:+78556465 Msa0227450:CDS
CATCTCGCGTTGTATCTAAG+AGG 0.552186 2_1:-78559813 None:intergenic
GGTTTGGAATTTGACAGTAA+AGG 0.552346 2_1:+78563595 Msa0227450:CDS
GGAAGATCCGAGCCTGGGAA+CGG 0.552921 2_1:-78554459 None:intergenic
GGATCTGGAAACCCGTTCCC+AGG 0.553049 2_1:+78554447 Msa0227450:CDS
AAGCGTTTGCTTCCAGCCGG+TGG 0.555449 2_1:-78557039 None:intergenic
AACTCCGTGCTGGTATCCGT+TGG 0.556241 2_1:-78563226 None:intergenic
ATCTGACTCGACACCTACCC+AGG 0.556374 2_1:+78558775 Msa0227450:CDS
GGACTCCATTTGATCCTGGA+AGG 0.557054 2_1:-78559885 None:intergenic
AGAATATATAAACTCCGTGC+TGG 0.558315 2_1:-78563236 None:intergenic
AATTGTAGGATGTATTCCTC+AGG 0.559745 2_1:+78555116 Msa0227450:CDS
CTTCTTACACTGGCAGTGAG+TGG 0.561486 2_1:-78557105 None:intergenic
GTCCTCTGTTGCATTAAAGA+AGG 0.563325 2_1:+78563289 Msa0227450:CDS
ATATTGAACCGACAATATCC+AGG 0.564555 2_1:-78564287 None:intergenic
TGATCGCAGGAGTCCTTGGT+GGG 0.564720 2_1:-78554505 None:intergenic
AAATTCGTCAAAAGCAACTA+CGG 0.564851 2_1:+78563199 Msa0227450:CDS
CTCGACACCTACCCAGGCAG+TGG 0.568947 2_1:+78558781 Msa0227450:CDS
TGGTGGGGAAACGCTTCTGA+AGG 0.571049 2_1:-78554489 None:intergenic
ATCAACATCCATGTGGATCA+GGG 0.572758 2_1:-78563071 None:intergenic
AGAAAGGAAGATCCGAGCCT+GGG 0.574903 2_1:-78554464 None:intergenic
TGGGTTAGGTTTAATTGCAA+GGG 0.575481 2_1:+78556361 Msa0227450:CDS
ACAGGCAGACAGACCTCAGA+AGG 0.575730 2_1:-78560259 None:intergenic
GTGTGCTGGCATTTCTGTTG+TGG 0.575742 2_1:+78564094 Msa0227450:CDS
CCACTTCTCAGCTATGGCAA+TGG 0.578082 2_1:-78554816 None:intergenic
ATGGGAGGTCGCCCAGGACA+AGG 0.579169 2_1:+78556437 Msa0227450:CDS
GATAACAGAAAATGCTAGTG+AGG 0.579465 2_1:+78555999 Msa0227450:CDS
TTGATCGCAGGAGTCCTTGG+TGG 0.582289 2_1:-78554506 None:intergenic
TTATAGCAACAAGGAGATAG+GGG 0.583110 2_1:+78563513 Msa0227450:CDS
AAAGATGTTAACCACTGCCT+GGG 0.584046 2_1:-78558792 None:intergenic
GACGTGCTTGAATCGTGTGC+TGG 0.584851 2_1:+78564080 Msa0227450:CDS
ATCATTAAGTCTGATTGCCG+AGG 0.586026 2_1:-78559706 None:intergenic
AGCAGAGACACAGAGAATGA+TGG 0.587311 2_1:-78563673 None:intergenic
TCATTAAGTCTGATTGCCGA+GGG 0.588075 2_1:-78559705 None:intergenic
GGGTTGGACGACGCCGACAG+TGG 0.588234 2_1:+78554348 Msa0227450:CDS
CTCTGTTGCATTAAAGAAGG+TGG 0.588460 2_1:+78563292 Msa0227450:CDS
GAAGAAAACTTTGTTGGACA+GGG 0.588600 2_1:+78555032 Msa0227450:CDS
TTGTCTCTTAAGATGCTCAA+TGG 0.588851 2_1:+78563703 Msa0227450:CDS
ATTCCAGTCACCACCACTTG+AGG 0.592207 2_1:-78559751 None:intergenic
AGGCACTTGAGAAGAGCGGT+TGG 0.593966 2_1:+78564057 Msa0227450:intron
AAAATCCAGCAATGAGATTG+CGG 0.595435 2_1:-78557062 None:intergenic
CGCACTCAGATCATTGCTGG+AGG 0.597096 2_1:+78554417 Msa0227450:CDS
ATGTTAACCACTGCCTGGGT+AGG 0.597288 2_1:-78558788 None:intergenic
GAAATTGAAGCCTCAAGTGG+TGG 0.597406 2_1:+78559741 Msa0227450:CDS
CCATTGCCATAGCTGAGAAG+TGG 0.597669 2_1:+78554816 Msa0227450:CDS
GGTCCAGAAATATACACCCA+TGG 0.599561 2_1:-78563466 None:intergenic
AGTTAGGTTGTGGAAATGGA+TGG 0.599610 2_1:+78554789 Msa0227450:CDS
ATTATGATCTTTAATATGGG+AGG 0.600959 2_1:+78556422 Msa0227450:CDS
TACTTGTATATCAGATGACA+CGG 0.601649 2_1:-78564386 None:intergenic
AAACCTACGCTGGCATCAGT+AGG 0.603160 2_1:-78563394 None:intergenic
TTGCAAGGGCAGTAGAAGAA+GGG 0.604616 2_1:+78556375 Msa0227450:CDS
TAAAGAATTCAAAACGGTGT+GGG 0.605491 2_1:-78556652 None:intergenic
TTGCGGACTGGTAAAGAACA+AGG 0.605806 2_1:+78559954 Msa0227450:CDS
CTTGCAAGATAAGCAAGGAA+AGG 0.606401 2_1:-78556982 None:intergenic
GCCCCATAAAGAATTCAAAA+CGG 0.606579 2_1:-78556658 None:intergenic
GAATGCTTGCAAGATAAGCA+AGG 0.606590 2_1:-78556987 None:intergenic
AAATTTAGAGAAGTTGCACT+AGG 0.607142 2_1:+78564356 Msa0227450:CDS
TTTGACAGTAAAGGCTGGGG+TGG 0.608295 2_1:+78563604 Msa0227450:CDS
AGTCTGAAAGCATTGATCGC+AGG 0.608787 2_1:-78554518 None:intergenic
CGTGAACTTAAAACCTACGC+TGG 0.609226 2_1:-78563404 None:intergenic
GCTGAAAAGCAAGAAGCTCG+TGG 0.609859 2_1:-78560219 None:intergenic
ACTGTAAACTGATAAAGCAT+GGG 0.610293 2_1:-78556747 None:intergenic
GAATTTGACAGTAAAGGCTG+GGG 0.612268 2_1:+78563601 Msa0227450:CDS
GGACCTACAATCAACCCCAC+TGG 0.614959 2_1:+78563484 Msa0227450:CDS
TAACAGTAATTGAAGCCCCT+CGG 0.615124 2_1:+78559689 Msa0227450:CDS
GTTCCTACTGATGCCAGCGT+AGG 0.617598 2_1:+78563391 Msa0227450:CDS
GTCCAGAAATATACACCCAT+GGG 0.618133 2_1:-78563465 None:intergenic
CGATAGACCGTGTTAACAAG+AGG 0.619023 2_1:-78564480 None:intergenic
TTCTCTGTGTCTCTGCTCGG+AGG 0.619743 2_1:+78563679 Msa0227450:CDS
TGTCCTTGAAAATGGAGTCA+GGG 0.621206 2_1:-78554754 None:intergenic
TGCAGGAACTCATCCACTGT+CGG 0.624029 2_1:-78554361 None:intergenic
TAATGGTTCCCTGATCCACA+TGG 0.624580 2_1:+78563063 Msa0227450:CDS
TCTTGCACCAAATCTAGCAC+AGG 0.626422 2_1:-78563548 None:intergenic
ACTGTCAAATTCCAAACCAG+AGG 0.626740 2_1:-78563590 None:intergenic
CATTGCATTGCAGGGCACCA+AGG 0.627918 2_1:+78554644 Msa0227450:intron
GCACTCAGATCATTGCTGGA+GGG 0.628809 2_1:+78554418 Msa0227450:CDS
AAAGAAATTGAAGCCTCAAG+TGG 0.632976 2_1:+78559738 Msa0227450:CDS
TGATCCAGCTGGAAAACAGA+GGG 0.633568 2_1:-78563317 None:intergenic
CCCTAGGCACTTGAGAAGAG+CGG 0.634628 2_1:+78564053 Msa0227450:intron
TCAAAAGGTGAAGTCAGCCA+AGG 0.636378 2_1:+78564164 Msa0227450:CDS
CATCTTATTGGATCAATACG+AGG 0.636572 2_1:+78554561 Msa0227450:CDS
CACCTTCTTTAATGCAACAG+AGG 0.637639 2_1:-78563291 None:intergenic
TCAGAAGCGTTTCCCCACCA+AGG 0.639066 2_1:+78554492 Msa0227450:CDS
TAGATCCAAGTGCTTGAAGG+AGG 0.641421 2_1:+78563912 Msa0227450:CDS
GAGATCAGCCTATTTGTGCA+CGG 0.644359 2_1:+78556687 Msa0227450:CDS
ATTGCCGCATGAGAGGGTAG+AGG 0.648136 2_1:-78559928 None:intergenic
TGGGCTTATGGAAAGTCTGG+TGG 0.653253 2_1:+78556716 Msa0227450:CDS
ATAAAGAATTCAAAACGGTG+TGG 0.653725 2_1:-78556653 None:intergenic
TGGCTTAGTTTATAGCAACA+AGG 0.656503 2_1:+78563504 Msa0227450:CDS
ACTATTGATGCATAAACCTG+TGG 0.658473 2_1:-78564246 None:intergenic
TCATCAACAATTGCAAGCCG+AGG 0.658683 2_1:-78558750 None:intergenic
AAAAGATTGTTTGAGCGTCG+GGG 0.659524 2_1:+78556467 Msa0227450:CDS
CTCCAGCAATGATCTGAGTG+CGG 0.670267 2_1:-78554416 None:intergenic
GATCGCAGGAGTCCTTGGTG+GGG 0.673573 2_1:-78554504 None:intergenic
TTGATCCAGCTGGAAAACAG+AGG 0.673922 2_1:-78563318 None:intergenic
ATCTTATTGGATCAATACGA+GGG 0.675831 2_1:+78554562 Msa0227450:CDS
AGACCTCAGAAGGTGCACGC+CGG 0.675996 2_1:-78560249 None:intergenic
AACAACCTAGTACTATCTGT+AGG 0.679974 2_1:+78564651 Msa0227450:three_prime_UTR
GTCGAGCTTTATTTCCACAG+TGG 0.682324 2_1:-78564192 None:intergenic
AAGTCCTCTACCCTCTCATG+CGG 0.683146 2_1:+78559924 Msa0227450:CDS
CGGACAACCCATCTATGACG+AGG 0.684087 2_1:+78555008 Msa0227450:CDS
GTTGCTATAAACTAAGCCAG+TGG 0.684096 2_1:-78563500 None:intergenic
TGCTATAAACTAAGCCAGTG+GGG 0.689156 2_1:-78563498 None:intergenic
CATTAAGTCTGATTGCCGAG+GGG 0.691664 2_1:-78559704 None:intergenic
CAGCCAAGGAAATGCCACTG+TGG 0.695145 2_1:+78564178 Msa0227450:CDS
ACTTGTATATCAGATGACAC+GGG 0.696772 2_1:-78564385 None:intergenic
AGATTTGATCAACATCCATG+TGG 0.705221 2_1:-78563078 None:intergenic
TGAGATGTACTGGTACAGGC+TGG 0.710025 2_1:+78556587 Msa0227450:intron
TGCTGAGCTAGCAATTGACG+GGG 0.716580 2_1:+78563036 Msa0227450:CDS
ATAGTACTGACTGATTAATG+CGG 0.723581 2_1:-78560182 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTTTAATTTTATATT+TGG - chr2_1:78559190-78559209 None:intergenic 0.0%
!!! CAATTTTTTATTAAAACAAA+TGG + chr2_1:78555747-78555766 Msa0227450:intron 10.0%
!!! CTTCAATTAAAATTTATTTT+TGG - chr2_1:78556177-78556196 None:intergenic 10.0%
!!! TACTTTTGTTTTTTAAATTA+CGG - chr2_1:78557828-78557847 None:intergenic 10.0%
!!! AATTAATAAATTTAAGATTC+AGG - chr2_1:78557965-78557984 None:intergenic 10.0%
!!! TTTTTTATATTATTTGTTTG+TGG - chr2_1:78558263-78558282 None:intergenic 10.0%
!! ATATTAGTAATAATATTCTA+CGG - chr2_1:78558500-78558519 None:intergenic 10.0%
!! TTAATTGAGTTAAAAGAATA+AGG + chr2_1:78555288-78555307 Msa0227450:intron 15.0%
!! TAATTGAGTTAAAAGAATAA+GGG + chr2_1:78555289-78555308 Msa0227450:intron 15.0%
!!! GACATAAAAAATTATTTTCA+TGG - chr2_1:78555608-78555627 None:intergenic 15.0%
!!! TACTTTTCGTTTTTAAATTA+TGG + chr2_1:78557699-78557718 Msa0227450:intron 15.0%
!!! ACTTTTTAAAAAACATTTCA+TGG - chr2_1:78557728-78557747 None:intergenic 15.0%
!! GACATTATATAATTATTAGT+AGG - chr2_1:78558917-78558936 None:intergenic 15.0%
!!! AAAATGATAAAAACTTGTTA+TGG - chr2_1:78559630-78559649 None:intergenic 15.0%
!!! ATTAAAATTACATTTTTGCA+TGG - chr2_1:78560993-78561012 None:intergenic 15.0%
!!! TATTTTTGAGCAATTTTATA+GGG - chr2_1:78561759-78561778 None:intergenic 15.0%
!!! ATATTTTTGAGCAATTTTAT+AGG - chr2_1:78561760-78561779 None:intergenic 15.0%
!!! TTCTCTTTATTTGTATATAA+AGG + chr2_1:78562581-78562600 Msa0227450:intron 15.0%
!!! TCTCTTTATTTGTATATAAA+GGG + chr2_1:78562582-78562601 Msa0227450:intron 15.0%
!!! TTTAATTGCTTTGTTTTTTA+TGG + chr2_1:78563974-78563993 Msa0227450:intron 15.0%
!!! ATTTTACTTTACTATACTTG+CGG - chr2_1:78554328-78554347 None:intergenic 20.0%
!! CAAGTATAGTAAAGTAAAAT+GGG + chr2_1:78554328-78554347 Msa0227450:exon 20.0%
!! TAGAAATAAATTGACTATGA+TGG + chr2_1:78554667-78554686 Msa0227450:CDS 20.0%
!! TTTGTATTAGCATAGAAATT+GGG - chr2_1:78554899-78554918 None:intergenic 20.0%
!! ATTTGTATTAGCATAGAAAT+TGG - chr2_1:78554900-78554919 None:intergenic 20.0%
!!! ACTTCAAACATATTTTAATG+TGG - chr2_1:78555483-78555502 None:intergenic 20.0%
!! TTTCTACAAAATTACAATGA+AGG - chr2_1:78555630-78555649 None:intergenic 20.0%
!! TAAAACTGAAAATGATTGTA+TGG - chr2_1:78555796-78555815 None:intergenic 20.0%
!! CAACAAAAAAAGTCATAAAT+AGG - chr2_1:78556253-78556272 None:intergenic 20.0%
!! GTAGTATTTATGTCATAAAT+AGG - chr2_1:78556286-78556305 None:intergenic 20.0%
!! TTAAAGATCATAATTCCATT+TGG - chr2_1:78556416-78556435 None:intergenic 20.0%
!! TGGAATTATGATCTTTAATA+TGG + chr2_1:78556418-78556437 Msa0227450:CDS 20.0%
!! GGAATTATGATCTTTAATAT+GGG + chr2_1:78556419-78556438 Msa0227450:CDS 20.0%
!!! ATATTTGAGTTTCTGAAAAA+TGG + chr2_1:78556892-78556911 Msa0227450:CDS 20.0%
!! AAATATCTTCTGTAGTTAAT+AGG + chr2_1:78557247-78557266 Msa0227450:intron 20.0%
!!! ATCTGTTATTTATTGAATTC+TGG + chr2_1:78557451-78557470 Msa0227450:intron 20.0%
!! TTATTCTAACTTACTTTCTT+TGG + chr2_1:78557550-78557569 Msa0227450:intron 20.0%
!! ACAAAATCTAAGAGAAATAA+GGG + chr2_1:78558187-78558206 Msa0227450:intron 20.0%
!!! AAAAATGGTCTTATTTCAAT+TGG + chr2_1:78558306-78558325 Msa0227450:intron 20.0%
!!! TCTATTTTGAGTTAATAATC+TGG + chr2_1:78558418-78558437 Msa0227450:intron 20.0%
!!! CTATTTTGAGTTAATAATCT+GGG + chr2_1:78558419-78558438 Msa0227450:intron 20.0%
!! TATTATTATATAACTGCTGT+AGG - chr2_1:78558881-78558900 None:intergenic 20.0%
!!! TATATATGCTTTTGAAACAT+TGG - chr2_1:78559081-78559100 None:intergenic 20.0%
!! TTTAAGCAATCTTAAAGATT+CGG + chr2_1:78559213-78559232 Msa0227450:intron 20.0%
!! TATATTTACTTAGTTGCAAT+TGG + chr2_1:78559400-78559419 Msa0227450:intron 20.0%
!!! TTTATCATTTTAGCAGAATA+TGG + chr2_1:78559639-78559658 Msa0227450:intron 20.0%
!!! TTATCATTTTAGCAGAATAT+GGG + chr2_1:78559640-78559659 Msa0227450:intron 20.0%
!! TTTGATCAATTTCGTATTAA+TGG + chr2_1:78560041-78560060 Msa0227450:intron 20.0%
!!! AAGGATTATGCAAATATTTT+TGG - chr2_1:78561130-78561149 None:intergenic 20.0%
!! AGGGAAATTAAAATCTAATT+TGG - chr2_1:78561740-78561759 None:intergenic 20.0%
!!! GTTAGTTTTAATGAAAAACA+GGG - chr2_1:78561822-78561841 None:intergenic 20.0%
!!! TGTTAGTTTTAATGAAAAAC+AGG - chr2_1:78561823-78561842 None:intergenic 20.0%
!! AACAATATTTAGACTTAAAG+TGG + chr2_1:78561871-78561890 Msa0227450:intron 20.0%
!! ACTATGTAAACTAGATAATT+TGG + chr2_1:78562007-78562026 Msa0227450:intron 20.0%
!! CTGATATAGATTAAATTGAA+GGG + chr2_1:78562253-78562272 Msa0227450:intron 20.0%
!!! GAGTTTTTTAAGTAATTAGT+AGG + chr2_1:78562470-78562489 Msa0227450:intron 20.0%
!!! TTTTTTAAGTAATTAGTAGG+TGG + chr2_1:78562473-78562492 Msa0227450:intron 20.0%
!!! CTCTTTATTTGTATATAAAG+GGG + chr2_1:78562583-78562602 Msa0227450:intron 20.0%
!! ATTATTGTTAATTCGATTGT+AGG + chr2_1:78562761-78562780 Msa0227450:intron 20.0%
!!! GTGTTAATTTTTAGTTTACA+TGG - chr2_1:78562846-78562865 None:intergenic 20.0%
!!! AAAGAATGCTAAACAATTTT+TGG + chr2_1:78564020-78564039 Msa0227450:intron 20.0%
!!! AAGAATGCTAAACAATTTTT+GGG + chr2_1:78564021-78564040 Msa0227450:intron 20.0%
! GCAAGTATAGTAAAGTAAAA+TGG + chr2_1:78554327-78554346 Msa0227450:exon 25.0%
! TATAGTAAAGTAAAATGGGT+TGG + chr2_1:78554332-78554351 Msa0227450:exon 25.0%
! GATTCATTCATCTTTCTTAT+TGG + chr2_1:78554607-78554626 Msa0227450:intron 25.0%
!!! TAGTCAATTTATTTCTACCT+TGG - chr2_1:78554664-78554683 None:intergenic 25.0%
! CTAATACAAATCATTTCTTC+AGG + chr2_1:78554909-78554928 Msa0227450:intron 25.0%
!! TTGAATGCTTTAGATGAAAA+CGG + chr2_1:78554988-78555007 Msa0227450:CDS 25.0%
! ATTCAACTTGAAAGAATTGT+AGG + chr2_1:78555102-78555121 Msa0227450:CDS 25.0%
! CTCAATTAAATTTCAGTACA+AGG - chr2_1:78555277-78555296 None:intergenic 25.0%
! TTAAAAGAATAAGGGTAACA+GGG + chr2_1:78555297-78555316 Msa0227450:intron 25.0%
! TTTCAGATAGTTAAAGACAT+GGG - chr2_1:78555337-78555356 None:intergenic 25.0%
!! TTTTCAGATAGTTAAAGACA+TGG - chr2_1:78555338-78555357 None:intergenic 25.0%
! ACAACAAAATTACTTGTGTT+AGG - chr2_1:78555454-78555473 None:intergenic 25.0%
!! GGATTAACTATTTGAGATAT+AGG - chr2_1:78555775-78555794 None:intergenic 25.0%
! TTGATTAATATGCATTCTTG+TGG + chr2_1:78555926-78555945 Msa0227450:intron 25.0%
! AATAATTACTCAGAGAATGA+AGG - chr2_1:78556029-78556048 None:intergenic 25.0%
!!! TACTTCAAAAAAGTATCTCT+GGG - chr2_1:78556121-78556140 None:intergenic 25.0%
!!! ATACTTCAAAAAAGTATCTC+TGG - chr2_1:78556122-78556141 None:intergenic 25.0%
! TTATGTCATAAATAGGCTAT+TGG - chr2_1:78556279-78556298 None:intergenic 25.0%
!!! TTCTTTATTTTGTTGTGTGT+AGG + chr2_1:78556319-78556338 Msa0227450:intron 25.0%
!!! TCTTTATTTTGTTGTGTGTA+GGG + chr2_1:78556320-78556339 Msa0227450:intron 25.0%
! ATATCAGTAATCAAACCAAA+TGG + chr2_1:78556398-78556417 Msa0227450:CDS 25.0%
! ATTATGATCTTTAATATGGG+AGG + chr2_1:78556422-78556441 Msa0227450:CDS 25.0%
!! TTGTAAGAAATTGACAGTTT+TGG - chr2_1:78556809-78556828 None:intergenic 25.0%
! ACATTATAATTATAAAGCGC+TGG - chr2_1:78557134-78557153 None:intergenic 25.0%
! TGTATAGTCATGCAATATTA+TGG + chr2_1:78557151-78557170 Msa0227450:intron 25.0%
! GTATAGTCATGCAATATTAT+GGG + chr2_1:78557152-78557171 Msa0227450:intron 25.0%
! TATAATTTCCACATTTCTTC+TGG + chr2_1:78557399-78557418 Msa0227450:intron 25.0%
! AAGTCTCAAACATTCTTAAT+AGG + chr2_1:78557486-78557505 Msa0227450:intron 25.0%
!!! TTTGGAAGCATATTATTTTG+AGG + chr2_1:78557568-78557587 Msa0227450:intron 25.0%
!!! TTGGAAGCATATTATTTTGA+GGG + chr2_1:78557569-78557588 Msa0227450:intron 25.0%
! CATATTTGTGTATAGTAACA+AGG - chr2_1:78558079-78558098 None:intergenic 25.0%
! TATACACAAATATGTCAGTA+GGG + chr2_1:78558085-78558104 Msa0227450:intron 25.0%
! CACAAAATCTAAGAGAAATA+AGG + chr2_1:78558186-78558205 Msa0227450:intron 25.0%
! ACGAAAAACTAGAAGAAAAA+TGG + chr2_1:78558291-78558310 Msa0227450:intron 25.0%
! AAAATAGAAAGATTTCTGAC+GGG - chr2_1:78558406-78558425 None:intergenic 25.0%
! CAAAATAGAAAGATTTCTGA+CGG - chr2_1:78558407-78558426 None:intergenic 25.0%
! AACCAAACAAATTTACTATG+GGG - chr2_1:78558622-78558641 None:intergenic 25.0%
! GAACCAAACAAATTTACTAT+GGG - chr2_1:78558623-78558642 None:intergenic 25.0%
! TGAACCAAACAAATTTACTA+TGG - chr2_1:78558624-78558643 None:intergenic 25.0%
! TAAATATACAATTAGGCTTG+GGG - chr2_1:78558942-78558961 None:intergenic 25.0%
! CTAAATATACAATTAGGCTT+GGG - chr2_1:78558943-78558962 None:intergenic 25.0%
! AGAAGCCTAAATATACAATT+AGG - chr2_1:78558949-78558968 None:intergenic 25.0%
! AATTTGATTGTGTTAGTAGT+AGG - chr2_1:78559000-78559019 None:intergenic 25.0%
! ATGCAATAATCTGATAAAAC+TGG - chr2_1:78559604-78559623 None:intergenic 25.0%
! AGTCAGCTAATAAGTTAATA+TGG - chr2_1:78559987-78560006 None:intergenic 25.0%
! TTAATCAGTCAGTACTATTA+TGG + chr2_1:78560187-78560206 Msa0227450:CDS 25.0%
! TAAAAGAAAATGAAAACGAC+AGG - chr2_1:78560280-78560299 None:intergenic 25.0%
!! TTTTCTCTCATTCAAATGTA+TGG - chr2_1:78560645-78560664 None:intergenic 25.0%
! TGAATGAGAGAAAATAAGAA+AGG + chr2_1:78560651-78560670 Msa0227450:intron 25.0%
! ACGATATAAAACAAAGTGAT+TGG + chr2_1:78560794-78560813 Msa0227450:intron 25.0%
! TTATCTTGAAGAAGTCTATA+TGG - chr2_1:78560970-78560989 None:intergenic 25.0%
!! AATGTTTCATCTCATTCTTT+TGG - chr2_1:78561534-78561553 None:intergenic 25.0%
!!! CATACAATTTTGAAGTTGAT+GGG + chr2_1:78561667-78561686 Msa0227450:intron 25.0%
! AAAACTAGACGATTATCAAT+AGG + chr2_1:78561847-78561866 Msa0227450:intron 25.0%
! ATTAGTTCACTTTGATGTTT+GGG - chr2_1:78561915-78561934 None:intergenic 25.0%
! TTTACTATGCATGTTTAGTT+TGG - chr2_1:78562077-78562096 None:intergenic 25.0%
! AACTAAACATGCATAGTAAA+AGG + chr2_1:78562077-78562096 Msa0227450:intron 25.0%
! ACTAAACATGCATAGTAAAA+GGG + chr2_1:78562078-78562097 Msa0227450:intron 25.0%
! GCTGATATAGATTAAATTGA+AGG + chr2_1:78562252-78562271 Msa0227450:intron 25.0%
!! TCTTTTGCAAATATAAGGTA+AGG - chr2_1:78562372-78562391 None:intergenic 25.0%
!! CTCAATCTTTTGCAAATATA+AGG - chr2_1:78562377-78562396 None:intergenic 25.0%
! TCATATTAGATCCTAACAAA+AGG - chr2_1:78562448-78562467 None:intergenic 25.0%
! ATTAGTAGGTGGTTAATTAT+AGG + chr2_1:78562484-78562503 Msa0227450:intron 25.0%
! TTAGGTAGATTATTAGTAAG+CGG + chr2_1:78562508-78562527 Msa0227450:intron 25.0%
! CTCTTATTATCTAATCCTAA+TGG - chr2_1:78562535-78562554 None:intergenic 25.0%
! CATTAGGATTAGATAATAAG+AGG + chr2_1:78562533-78562552 Msa0227450:intron 25.0%
!! ATCTGTTTCTTCTTATAGTT+TGG + chr2_1:78562734-78562753 Msa0227450:intron 25.0%
! AGCATTATTAAGAACTGATA+CGG - chr2_1:78563020-78563039 None:intergenic 25.0%
! TTTCTTATTCTTAACCAGTT+GGG + chr2_1:78563742-78563761 Msa0227450:CDS 25.0%
!! TGACACATTTTATAGTTTTC+CGG + chr2_1:78563771-78563790 Msa0227450:CDS 25.0%
!!! ATTGCTTTGTTTTTTATGGT+TGG + chr2_1:78563978-78563997 Msa0227450:intron 25.0%
!! AGAATGCTAAACAATTTTTG+GGG + chr2_1:78564022-78564041 Msa0227450:intron 25.0%
!!! CTTAATAGTCTTTTTGAGAT+AGG - chr2_1:78564132-78564151 None:intergenic 25.0%
! ATCTGATATACAAGTATTCT+TGG + chr2_1:78564393-78564412 Msa0227450:three_prime_UTR 25.0%
!!! CATTCGTATTTTAAGGAATA+AGG + chr2_1:78564438-78564457 Msa0227450:three_prime_UTR 25.0%
! TTTAAGGAATAAGGAAAGTT+TGG + chr2_1:78564447-78564466 Msa0227450:three_prime_UTR 25.0%
! TTAAGGAATAAGGAAAGTTT+GGG + chr2_1:78564448-78564467 Msa0227450:three_prime_UTR 25.0%
!! ATGTTTCTGTAATTCATTCA+TGG + chr2_1:78564600-78564619 Msa0227450:three_prime_UTR 25.0%
AGATGTCTTCAATACGAAAA+TGG - chr2_1:78554546-78554565 None:intergenic 30.0%
TCGTATTGAAGACATCTTAT+TGG + chr2_1:78554549-78554568 Msa0227450:CDS 30.0%
ATCTTATTGGATCAATACGA+GGG + chr2_1:78554562-78554581 Msa0227450:CDS 30.0%
AATCCCTTCATAAAAAGTGA+AGG - chr2_1:78554726-78554745 None:intergenic 30.0%
AACAATTCTGTCCTTGAAAA+TGG - chr2_1:78554765-78554784 None:intergenic 30.0%
AAATCATTTCTTCAGGTCTA+TGG + chr2_1:78554916-78554935 Msa0227450:intron 30.0%
ATTCAAGTATAGGTTTATCC+AGG - chr2_1:78554974-78554993 None:intergenic 30.0%
! CATCTAAAGCATTCAAGTAT+AGG - chr2_1:78554984-78555003 None:intergenic 30.0%
AATTCCATTATCTCTGCAAT+AGG - chr2_1:78555085-78555104 None:intergenic 30.0%
TGCAGGTTATTATAACTGTT+AGG + chr2_1:78555161-78555180 Msa0227450:intron 30.0%
GTTAAAAGAATAAGGGTAAC+AGG + chr2_1:78555296-78555315 Msa0227450:intron 30.0%
! CATTAGCTTCTTGATGAATT+TGG + chr2_1:78555874-78555893 Msa0227450:intron 30.0%
TGATTAAGCTAAAACATCAC+TGG - chr2_1:78555905-78555924 None:intergenic 30.0%
TTAATATGCATTCTTGTGGT+TGG + chr2_1:78555930-78555949 Msa0227450:intron 30.0%
ATTTGGATTAAGAATCTGCA+CGG - chr2_1:78555959-78555978 None:intergenic 30.0%
!! ACTTCAAAAAAGTATCTCTG+GGG - chr2_1:78556120-78556139 None:intergenic 30.0%
TTGGCAAACTAAAATCATTC+AGG + chr2_1:78556508-78556527 Msa0227450:CDS 30.0%
GTTCTTCTCAATTTCAACTA+AGG - chr2_1:78556630-78556649 None:intergenic 30.0%
TAAAGAATTCAAAACGGTGT+GGG - chr2_1:78556655-78556674 None:intergenic 30.0%
ATAAAGAATTCAAAACGGTG+TGG - chr2_1:78556656-78556675 None:intergenic 30.0%
!! ACACCGTTTTGAATTCTTTA+TGG + chr2_1:78556655-78556674 Msa0227450:CDS 30.0%
!! CACCGTTTTGAATTCTTTAT+GGG + chr2_1:78556656-78556675 Msa0227450:CDS 30.0%
!! ACCGTTTTGAATTCTTTATG+GGG + chr2_1:78556657-78556676 Msa0227450:CDS 30.0%
ACTGTAAACTGATAAAGCAT+GGG - chr2_1:78556750-78556769 None:intergenic 30.0%
AACTGTAAACTGATAAAGCA+TGG - chr2_1:78556751-78556770 None:intergenic 30.0%
CAAGAATATTGTTATCCTGA+AGG + chr2_1:78556826-78556845 Msa0227450:intron 30.0%
! TTCTCTGGATTTGTATTTTG+AGG + chr2_1:78556933-78556952 Msa0227450:CDS 30.0%
ACAGCAAAGATAAAACCAAA+TGG - chr2_1:78557215-78557234 None:intergenic 30.0%
! TTAATGCGTGGAATTTTGTT+TGG - chr2_1:78557307-78557326 None:intergenic 30.0%
CACGCATTAATGAATGAATA+GGG + chr2_1:78557317-78557336 Msa0227450:intron 30.0%
TCAAACATTCTTAATAGGCT+TGG + chr2_1:78557491-78557510 Msa0227450:intron 30.0%
CAAACATTCTTAATAGGCTT+GGG + chr2_1:78557492-78557511 Msa0227450:intron 30.0%
! TTTAAGGTTAAGAGTGTGTT+TGG - chr2_1:78557886-78557905 None:intergenic 30.0%
AAACACACTCTTAACCTTAA+AGG + chr2_1:78557885-78557904 Msa0227450:intron 30.0%
ATCAAGAACTTTCTTCTTTC+TGG + chr2_1:78557985-78558004 Msa0227450:intron 30.0%
CTATACACAAATATGTCAGT+AGG + chr2_1:78558084-78558103 Msa0227450:intron 30.0%
GGAAAAAGGTTACTTAAAGT+GGG - chr2_1:78558356-78558375 None:intergenic 30.0%
TGGAAAAAGGTTACTTAAAG+TGG - chr2_1:78558357-78558376 None:intergenic 30.0%
! TTCAAATGCATGATGGAAAA+AGG - chr2_1:78558370-78558389 None:intergenic 30.0%
! TTTTCCATCATGCATTTGAA+TGG + chr2_1:78558370-78558389 Msa0227450:intron 30.0%
AAATAGAAAGATTTCTGACG+GGG - chr2_1:78558405-78558424 None:intergenic 30.0%
! GTATATATTCATACTTGCTG+TGG + chr2_1:78558454-78558473 Msa0227450:intron 30.0%
AAGGAAAAATGACAACATTC+TGG - chr2_1:78558689-78558708 None:intergenic 30.0%
!!! ATGTTGTCATTTTTCCTTCA+AGG + chr2_1:78558691-78558710 Msa0227450:CDS 30.0%
CCTAAATATACAATTAGGCT+TGG - chr2_1:78558944-78558963 None:intergenic 30.0%
CCAAGCCTAATTGTATATTT+AGG + chr2_1:78558941-78558960 Msa0227450:intron 30.0%
!! TACCATCACTTTTCAATGTA+AGG + chr2_1:78559052-78559071 Msa0227450:intron 30.0%
TTCCTTACATTGAAAAGTGA+TGG - chr2_1:78559057-78559076 None:intergenic 30.0%
! AGTAGTTAAATTTAAGGCAG+GGG - chr2_1:78559261-78559280 None:intergenic 30.0%
! CAGTAGTTAAATTTAAGGCA+GGG - chr2_1:78559262-78559281 None:intergenic 30.0%
TGGTCCAGTAGTTAAATTTA+AGG - chr2_1:78559267-78559286 None:intergenic 30.0%
ACAAAAGCTACTTCTAAATC+TGG - chr2_1:78560097-78560116 None:intergenic 30.0%
! TTCTAGTAACTCAACAGTTT+TGG - chr2_1:78560155-78560174 None:intergenic 30.0%
AAAACTGTTGAGTTACTAGA+AGG + chr2_1:78560154-78560173 Msa0227450:CDS 30.0%
!! ATAGTACTGACTGATTAATG+CGG - chr2_1:78560185-78560204 None:intergenic 30.0%
TTCTTTCTTCAAAATTACCG+TGG - chr2_1:78560391-78560410 None:intergenic 30.0%
CTGTCATTATCTGCTTTAAT+AGG + chr2_1:78560599-78560618 Msa0227450:intron 30.0%
ATCTGCTTTAATAGGAGAAA+AGG + chr2_1:78560607-78560626 Msa0227450:intron 30.0%
TCATTCAAATGTATGGAATC+CGG - chr2_1:78560638-78560657 None:intergenic 30.0%
! GAGAAAATAAGAAAGGCATA+TGG + chr2_1:78560658-78560677 Msa0227450:intron 30.0%
TATCATCTACATAATCAACC+AGG + chr2_1:78560748-78560767 Msa0227450:intron 30.0%
CATACAAAACTACTGCAATA+TGG + chr2_1:78560830-78560849 Msa0227450:intron 30.0%
! TGGTAAGATTGATTGACTTA+AGG - chr2_1:78561167-78561186 None:intergenic 30.0%
AGTCAATCAATCTTACCATT+AGG + chr2_1:78561169-78561188 Msa0227450:intron 30.0%
!! ACTTCAAAGGTATCTCATAT+CGG - chr2_1:78561322-78561341 None:intergenic 30.0%
CATTTACTCCTCATGTATTT+AGG - chr2_1:78561462-78561481 None:intergenic 30.0%
TTATAAGATAGGACATGGTT+AGG + chr2_1:78561498-78561517 Msa0227450:intron 30.0%
TTCATACACCTACCAAAATA+GGG - chr2_1:78561613-78561632 None:intergenic 30.0%
CCATCAACTTCAAAATTGTA+TGG - chr2_1:78561669-78561688 None:intergenic 30.0%
!!! CCATACAATTTTGAAGTTGA+TGG + chr2_1:78561666-78561685 Msa0227450:intron 30.0%
CATTAGTTCACTTTGATGTT+TGG - chr2_1:78561916-78561935 None:intergenic 30.0%
ATCAAAGTGAACTAATGCAA+AGG + chr2_1:78561919-78561938 Msa0227450:intron 30.0%
TCAAAGTGAACTAATGCAAA+GGG + chr2_1:78561920-78561939 Msa0227450:intron 30.0%
ATGCGGTCAAGTAAATAAAT+GGG - chr2_1:78561953-78561972 None:intergenic 30.0%
TATGCGGTCAAGTAAATAAA+TGG - chr2_1:78561954-78561973 None:intergenic 30.0%
ATAGTGAGTCGTATCAATTT+GGG - chr2_1:78561992-78562011 None:intergenic 30.0%
CTAGATAATTTGGAAAGACT+AGG + chr2_1:78562017-78562036 Msa0227450:intron 30.0%
TAAAAGGGAAATCTTTGACA+TGG + chr2_1:78562093-78562112 Msa0227450:intron 30.0%
TGTGTCATCACTTTAACTAA+TGG - chr2_1:78562211-78562230 None:intergenic 30.0%
AATCTTGAGAATGAGTCAAT+CGG + chr2_1:78562230-78562249 Msa0227450:intron 30.0%
ATTAGATCCTAACAAAAGGT+TGG - chr2_1:78562444-78562463 None:intergenic 30.0%
AGGTGGTTAATTATAGGTTT+AGG + chr2_1:78562490-78562509 Msa0227450:intron 30.0%
GTATATAAAGGGGAATTCTT+TGG + chr2_1:78562593-78562612 Msa0227450:intron 30.0%
!! ACAGATTGAGTTTTGTGTTT+AGG + chr2_1:78562630-78562649 Msa0227450:intron 30.0%
!! CAGATTGAGTTTTGTGTTTA+GGG + chr2_1:78562631-78562650 Msa0227450:intron 30.0%
TGTGGCGATTAAAGAAAATA+TGG - chr2_1:78562715-78562734 None:intergenic 30.0%
ACTATAAGAAGAAACAGATG+TGG - chr2_1:78562733-78562752 None:intergenic 30.0%
AGTAATGAGAAAACTAACCA+CGG - chr2_1:78562921-78562940 None:intergenic 30.0%
! GTCAAATCAGTTGATATGAT+AGG + chr2_1:78562980-78562999 Msa0227450:CDS 30.0%
!!! GACGAATTTTTTTATGCTTG+TGG - chr2_1:78563188-78563207 None:intergenic 30.0%
AAATTCGTCAAAAGCAACTA+CGG + chr2_1:78563199-78563218 Msa0227450:CDS 30.0%
! AAAAGCTCTTTTCAACAAAC+TGG + chr2_1:78563267-78563286 Msa0227450:CDS 30.0%
TTTATAGCAACAAGGAGATA+GGG + chr2_1:78563512-78563531 Msa0227450:CDS 30.0%
ATAATTGATACTTCATCCTC+TGG + chr2_1:78563574-78563593 Msa0227450:CDS 30.0%
GTTTCTTATTCTTAACCAGT+TGG + chr2_1:78563741-78563760 Msa0227450:CDS 30.0%
! GACACATTTTATAGTTTTCC+GGG + chr2_1:78563772-78563791 Msa0227450:CDS 30.0%
GCATATTTAACAGTACTATG+AGG - chr2_1:78563808-78563827 None:intergenic 30.0%
!! GAATGCTAAACAATTTTTGG+GGG + chr2_1:78564023-78564042 Msa0227450:intron 30.0%
!!! AATAGTCTTTTTGAGATAGG+CGG - chr2_1:78564129-78564148 None:intergenic 30.0%
AAGCTGAAGATTTCATCAAA+AGG + chr2_1:78564149-78564168 Msa0227450:CDS 30.0%
! AAATGATTTCAAGAAAGCAC+TGG + chr2_1:78564322-78564341 Msa0227450:CDS 30.0%
AAATTTAGAGAAGTTGCACT+AGG + chr2_1:78564356-78564375 Msa0227450:CDS 30.0%
TACTTGTATATCAGATGACA+CGG - chr2_1:78564389-78564408 None:intergenic 30.0%
! TGCATGTCATTCGTATTTTA+AGG + chr2_1:78564431-78564450 Msa0227450:three_prime_UTR 30.0%
! TTTTGTTCCTCTTGTTAACA+CGG + chr2_1:78564473-78564492 Msa0227450:three_prime_UTR 30.0%
!!! TCGTCCATTTTTTATTTGCA+TGG + chr2_1:78564500-78564519 Msa0227450:three_prime_UTR 30.0%
CACACCATGCAAATAAAAAA+TGG - chr2_1:78564507-78564526 None:intergenic 30.0%
TAGGACAGGATTTAAAAAGT+CGG + chr2_1:78564670-78564689 Msa0227450:three_prime_UTR 30.0%
AAAAATAGTGAAGACATGCA+CGG - chr2_1:78564711-78564730 None:intergenic 30.0%
CATCTTATTGGATCAATACG+AGG + chr2_1:78554561-78554580 Msa0227450:CDS 35.0%
TGAAAATTGCATTGCATTGC+AGG + chr2_1:78554635-78554654 Msa0227450:intron 35.0%
GAAAATTGCATTGCATTGCA+GGG + chr2_1:78554636-78554655 Msa0227450:intron 35.0%
!!! TGGTCCTTCACTTTTTATGA+AGG + chr2_1:78554719-78554738 Msa0227450:CDS 35.0%
!!! GGTCCTTCACTTTTTATGAA+GGG + chr2_1:78554720-78554739 Msa0227450:CDS 35.0%
!! GACAGAATTGTTTCTGAGTT+AGG + chr2_1:78554773-78554792 Msa0227450:CDS 35.0%
!! ATTGTTTCTGAGTTAGGTTG+TGG + chr2_1:78554779-78554798 Msa0227450:CDS 35.0%
AAACAAACAAACACCTTGGA+AGG - chr2_1:78554845-78554864 None:intergenic 35.0%
CAACAAACAAACAAACACCT+TGG - chr2_1:78554849-78554868 None:intergenic 35.0%
AGAAGAAAACTTTGTTGGAC+AGG + chr2_1:78555031-78555050 Msa0227450:CDS 35.0%
GAAGAAAACTTTGTTGGACA+GGG + chr2_1:78555032-78555051 Msa0227450:CDS 35.0%
CTATCCTATTGCAGAGATAA+TGG + chr2_1:78555078-78555097 Msa0227450:CDS 35.0%
AATTGTAGGATGTATTCCTC+AGG + chr2_1:78555116-78555135 Msa0227450:CDS 35.0%
AATTCCAGAACTATCTATGC+AGG + chr2_1:78555144-78555163 Msa0227450:intron 35.0%
ATAACCTGCATAGATAGTTC+TGG - chr2_1:78555151-78555170 None:intergenic 35.0%
CGAAAGGACTTGTATGTTAA+GGG - chr2_1:78555213-78555232 None:intergenic 35.0%
CCTTAACATACAAGTCCTTT+CGG + chr2_1:78555211-78555230 Msa0227450:intron 35.0%
CTCAGATTCTTAGAGAGAAA+GGG - chr2_1:78555835-78555854 None:intergenic 35.0%
! GAATCTGAGGTATTCTAGTA+TGG + chr2_1:78555846-78555865 Msa0227450:intron 35.0%
TTTGGATTAAGAATCTGCAC+GGG - chr2_1:78555958-78555977 None:intergenic 35.0%
TTAGTCATTGCATCTGGATT+TGG - chr2_1:78555976-78555995 None:intergenic 35.0%
ATCATCTTAGTCATTGCATC+TGG - chr2_1:78555982-78556001 None:intergenic 35.0%
GATAACAGAAAATGCTAGTG+AGG + chr2_1:78555999-78556018 Msa0227450:CDS 35.0%
GAGTAATTATTGTGCACTTC+AGG + chr2_1:78556038-78556057 Msa0227450:CDS 35.0%
CAATTAAACCTAACCCAAAC+TGG - chr2_1:78556358-78556377 None:intergenic 35.0%
! TTGGGTTAGGTTTAATTGCA+AGG + chr2_1:78556360-78556379 Msa0227450:CDS 35.0%
! TGGGTTAGGTTTAATTGCAA+GGG + chr2_1:78556361-78556380 Msa0227450:CDS 35.0%
! GTTTTCGCATTACAAAGCTT+TGG + chr2_1:78556489-78556508 Msa0227450:CDS 35.0%
TCAATAAGCTACACTTTCAC+TGG - chr2_1:78556570-78556589 None:intergenic 35.0%
TGTAGCTTATTGAGATGTAC+TGG + chr2_1:78556577-78556596 Msa0227450:intron 35.0%
! TTATTGAGATGTACTGGTAC+AGG + chr2_1:78556583-78556602 Msa0227450:intron 35.0%
GCCCCATAAAGAATTCAAAA+CGG - chr2_1:78556661-78556680 None:intergenic 35.0%
TTGTGCTTCAAAATTCCTTC+AGG - chr2_1:78556844-78556863 None:intergenic 35.0%
CAATGCAATTTGATACTTGC+AGG + chr2_1:78556861-78556880 Msa0227450:intron 35.0%
! CTATTTTCCATATGAACCAC+CGG + chr2_1:78557023-78557042 Msa0227450:CDS 35.0%
AAAATCCAGCAATGAGATTG+CGG - chr2_1:78557065-78557084 None:intergenic 35.0%
GGTATGTCATCTTGTAAGTA+TGG + chr2_1:78557268-78557287 Msa0227450:intron 35.0%
CCTATTCATTCATTAATGCG+TGG - chr2_1:78557319-78557338 None:intergenic 35.0%
CCACGCATTAATGAATGAAT+AGG + chr2_1:78557316-78557335 Msa0227450:intron 35.0%
! TTCCACATTTCTTCTGGTTA+TGG + chr2_1:78557405-78557424 Msa0227450:intron 35.0%
! TCCACATTTCTTCTGGTTAT+GGG + chr2_1:78557406-78557425 Msa0227450:intron 35.0%
AATTCCTAAGAGATACAAGC+TGG + chr2_1:78557619-78557638 Msa0227450:intron 35.0%
! ATACAAGCTGGAAGTCTTTT+AGG + chr2_1:78557631-78557650 Msa0227450:intron 35.0%
! TACAAGCTGGAAGTCTTTTA+GGG + chr2_1:78557632-78557651 Msa0227450:intron 35.0%
TTTGGATTGAGGGTTTAGAA+GGG - chr2_1:78557868-78557887 None:intergenic 35.0%
! TAAGAGTGTGTTTGGATTGA+GGG - chr2_1:78557878-78557897 None:intergenic 35.0%
! TTAAGAGTGTGTTTGGATTG+AGG - chr2_1:78557879-78557898 None:intergenic 35.0%
TGCAAGTTAGAAGACCTTTA+AGG - chr2_1:78557902-78557921 None:intergenic 35.0%
AGCATATAGTTTGGTCATTC+TGG - chr2_1:78558020-78558039 None:intergenic 35.0%
ATAGTAACAAGGAGAAGAGA+AGG - chr2_1:78558068-78558087 None:intergenic 35.0%
GCTATAACTTAGATGACAAC+TGG - chr2_1:78558111-78558130 None:intergenic 35.0%
! ATAGAATCAGAAGAGCATGT+AGG - chr2_1:78558150-78558169 None:intergenic 35.0%
AAGAGAAATAAGGGATAAGC+TGG + chr2_1:78558196-78558215 Msa0227450:intron 35.0%
! TCTTATTTCAATTGGTCTCC+TGG + chr2_1:78558314-78558333 Msa0227450:intron 35.0%
! TGCCCCATAGTAAATTTGTT+TGG + chr2_1:78558617-78558636 Msa0227450:intron 35.0%
! CATTTTTCCTTCAAGGAATG+CGG + chr2_1:78558698-78558717 Msa0227450:CDS 35.0%
TTTAGGCTTCTTCCTTACAT+AGG + chr2_1:78558958-78558977 Msa0227450:intron 35.0%
AATAGTTGTTGACACAGTAC+AGG + chr2_1:78559020-78559039 Msa0227450:intron 35.0%
! TAGTTAAATTTAAGGCAGGG+GGG - chr2_1:78559259-78559278 None:intergenic 35.0%
! GTAGTTAAATTTAAGGCAGG+GGG - chr2_1:78559260-78559279 None:intergenic 35.0%
! CCAGTAGTTAAATTTAAGGC+AGG - chr2_1:78559263-78559282 None:intergenic 35.0%
CCTGCCTTAAATTTAACTAC+TGG + chr2_1:78559260-78559279 Msa0227450:intron 35.0%
ATAAGATCTGCTGTGTTGTA+TGG - chr2_1:78559329-78559348 None:intergenic 35.0%
!! TTTGATTTTTGCTCACAGCA+AGG + chr2_1:78559374-78559393 Msa0227450:intron 35.0%
AAAGGAGATAAAGATGCACA+AGG - chr2_1:78559462-78559481 None:intergenic 35.0%
AAAGAAATTGAAGCCTCAAG+TGG + chr2_1:78559738-78559757 Msa0227450:CDS 35.0%
!!! GACTGGAATTGCTATTTTTG+AGG + chr2_1:78559765-78559784 Msa0227450:CDS 35.0%
! ATTAGCTGACTTAGACTGTA+TGG + chr2_1:78559996-78560015 Msa0227450:intron 35.0%
! CTAACAACCAATGTTTTTCC+AGG + chr2_1:78560066-78560085 Msa0227450:intron 35.0%
GGATAAACCTGGAAAAACAT+TGG - chr2_1:78560076-78560095 None:intergenic 35.0%
CTTCTAAATCTGGATAAACC+TGG - chr2_1:78560087-78560106 None:intergenic 35.0%
TGCATCTGTTCTTTCATTTG+TGG + chr2_1:78560348-78560367 Msa0227450:intron 35.0%
GGAAGTTCTTTCATGCAATT+AGG - chr2_1:78560439-78560458 None:intergenic 35.0%
TACAACTCCTTGTGTGAATT+TGG - chr2_1:78560486-78560505 None:intergenic 35.0%
AGTTGTATCGTTGTCATTCA+TGG + chr2_1:78560499-78560518 Msa0227450:intron 35.0%
GTTGTATCGTTGTCATTCAT+GGG + chr2_1:78560500-78560519 Msa0227450:intron 35.0%
TTGTATCGTTGTCATTCATG+GGG + chr2_1:78560501-78560520 Msa0227450:intron 35.0%
ATGCTTTCACCAGTTATTAC+AGG + chr2_1:78560536-78560555 Msa0227450:intron 35.0%
AATAGGAGAAAAGGATAACC+CGG + chr2_1:78560616-78560635 Msa0227450:intron 35.0%
CATTCAAATGTATGGAATCC+GGG - chr2_1:78560637-78560656 None:intergenic 35.0%
GTAGATGATATTGTCAGAAC+TGG - chr2_1:78560738-78560757 None:intergenic 35.0%
! GGAACTGTTTAAGACCATAT+AGG + chr2_1:78560880-78560899 Msa0227450:intron 35.0%
TTCTCCTGAGAAATAAACTC+AGG + chr2_1:78560936-78560955 Msa0227450:intron 35.0%
AGATGTCAGATGTCTTACAA+AGG + chr2_1:78561068-78561087 Msa0227450:intron 35.0%
! TCTTCAGCTTTATATGGTGA+AGG - chr2_1:78561200-78561219 None:intergenic 35.0%
TTCACCATATAAAGCTGAAG+AGG + chr2_1:78561199-78561218 Msa0227450:intron 35.0%
! TGTTCCTCTTCAGCTTTATA+TGG - chr2_1:78561206-78561225 None:intergenic 35.0%
GGCATAGCAACAATAATTGT+AGG + chr2_1:78561232-78561251 Msa0227450:intron 35.0%
ATAATTGTAGGAAGAGACCT+TGG + chr2_1:78561244-78561263 Msa0227450:intron 35.0%
GTATGGAACAAACTCGAAAA+AGG + chr2_1:78561287-78561306 Msa0227450:intron 35.0%
!! ATGAGATACCTTTGAAGTGT+AGG + chr2_1:78561324-78561343 Msa0227450:intron 35.0%
!!! CGATAACGTTTTTGAGATTG+AGG + chr2_1:78561357-78561376 Msa0227450:intron 35.0%
! GATCACTCAAGTGTCTATTT+TGG - chr2_1:78561387-78561406 None:intergenic 35.0%
CATGTGAACCTAAATACATG+AGG + chr2_1:78561451-78561470 Msa0227450:intron 35.0%
AGGCATGCGATTTATAAGAT+AGG + chr2_1:78561487-78561506 Msa0227450:intron 35.0%
GCGATTTATAAGATAGGACA+TGG + chr2_1:78561493-78561512 Msa0227450:intron 35.0%
! GTTTCATCTCATTCTTTTGG+AGG - chr2_1:78561531-78561550 None:intergenic 35.0%
GAGATGAAACATTACCATGA+AGG + chr2_1:78561541-78561560 Msa0227450:intron 35.0%
!!! TTCAACTACCCTATTTTGGT+AGG + chr2_1:78561602-78561621 Msa0227450:intron 35.0%
GTTCATACACCTACCAAAAT+AGG - chr2_1:78561614-78561633 None:intergenic 35.0%
TTGTTGAAGAATGTCATCCA+AGG + chr2_1:78561643-78561662 Msa0227450:intron 35.0%
ACTTCAAAATTGTATGGCCT+TGG - chr2_1:78561663-78561682 None:intergenic 35.0%
ATCACTGTGTAAAGTGCAAA+TGG + chr2_1:78561709-78561728 Msa0227450:intron 35.0%
CAAAGTGAACTAATGCAAAG+GGG + chr2_1:78561921-78561940 Msa0227450:intron 35.0%
AAAGTGAACTAATGCAAAGG+GGG + chr2_1:78561922-78561941 Msa0227450:intron 35.0%
CATAGTGAGTCGTATCAATT+TGG - chr2_1:78561993-78562012 None:intergenic 35.0%
TCTTCTCAAACTTCAAAAGC+TGG - chr2_1:78562045-78562064 None:intergenic 35.0%
GGTTTGACAAGAGATAATAG+AGG + chr2_1:78562125-78562144 Msa0227450:intron 35.0%
GAATTTGTCCTTTATGAGCT+TGG - chr2_1:78562283-78562302 None:intergenic 35.0%
!! GCATTGATTACTGTTATGAC+AGG + chr2_1:78562304-78562323 Msa0227450:intron 35.0%
ATTACTGTTATGACAGGATC+AGG + chr2_1:78562310-78562329 Msa0227450:intron 35.0%
TTACTGTTATGACAGGATCA+GGG + chr2_1:78562311-78562330 Msa0227450:intron 35.0%
TTTGCAAAAGATTGAGTGCA+CGG + chr2_1:78562381-78562400 Msa0227450:intron 35.0%
TTATTAGTAAGCGGACCATT+AGG + chr2_1:78562517-78562536 Msa0227450:intron 35.0%
TAGATAATAAGAGGCCTGTT+TGG + chr2_1:78562542-78562561 Msa0227450:intron 35.0%
AGATAATAAGAGGCCTGTTT+GGG + chr2_1:78562543-78562562 Msa0227450:intron 35.0%
AATTCGATTGTAGGATCCTT+TGG + chr2_1:78562770-78562789 Msa0227450:intron 35.0%
AAAGCCCCTCTTCATTATTA+TGG + chr2_1:78562812-78562831 Msa0227450:intron 35.0%
AAGCCCCTCTTCATTATTAT+GGG + chr2_1:78562813-78562832 Msa0227450:intron 35.0%
GTAATGAGAAAACTAACCAC+GGG - chr2_1:78562920-78562939 None:intergenic 35.0%
! TGACATTTTCACAGATTCTC+TGG - chr2_1:78562964-78562983 None:intergenic 35.0%
AGATTTGATCAACATCCATG+TGG - chr2_1:78563081-78563100 None:intergenic 35.0%
AGAATATATAAACTCCGTGC+TGG - chr2_1:78563239-78563258 None:intergenic 35.0%
TTGCTATAAACTAAGCCAGT+GGG - chr2_1:78563502-78563521 None:intergenic 35.0%
TGGCTTAGTTTATAGCAACA+AGG + chr2_1:78563504-78563523 Msa0227450:CDS 35.0%
GTTTATAGCAACAAGGAGAT+AGG + chr2_1:78563511-78563530 Msa0227450:CDS 35.0%
TTATAGCAACAAGGAGATAG+GGG + chr2_1:78563513-78563532 Msa0227450:CDS 35.0%
! GGTTTGGAATTTGACAGTAA+AGG + chr2_1:78563595-78563614 Msa0227450:CDS 35.0%
TTGTCTCTTAAGATGCTCAA+TGG + chr2_1:78563703-78563722 Msa0227450:CDS 35.0%
TCAATGGTGTTCTCAGATTT+GGG + chr2_1:78563719-78563738 Msa0227450:CDS 35.0%
TATTCTTAACCAGTTGGGTT+TGG + chr2_1:78563747-78563766 Msa0227450:CDS 35.0%
CTATGAGGTTTACTTAATCC+CGG - chr2_1:78563793-78563812 None:intergenic 35.0%
ACTATTGATGCATAAACCTG+TGG - chr2_1:78564249-78564268 None:intergenic 35.0%
ACAGGTTTATGCATCAATAG+TGG + chr2_1:78564248-78564267 Msa0227450:CDS 35.0%
ATATTGAACCGACAATATCC+AGG - chr2_1:78564290-78564309 None:intergenic 35.0%
ACTTGTATATCAGATGACAC+GGG - chr2_1:78564388-78564407 None:intergenic 35.0%
TGTAATTCATTCATGGTGTG+AGG + chr2_1:78564607-78564626 Msa0227450:three_prime_UTR 35.0%
AACAACCTAGTACTATCTGT+AGG + chr2_1:78564651-78564670 Msa0227450:three_prime_UTR 35.0%
TCTTCAGGGAGAAAAATGCT+AGG - chr2_1:78554698-78554717 None:intergenic 40.0%
TGTCCTTGAAAATGGAGTCA+GGG - chr2_1:78554757-78554776 None:intergenic 40.0%
! TCTGAGTTAGGTTGTGGAAA+TGG + chr2_1:78554785-78554804 Msa0227450:CDS 40.0%
! AGTTAGGTTGTGGAAATGGA+TGG + chr2_1:78554789-78554808 Msa0227450:CDS 40.0%
!! CAGCTCTAGGATTGATATCA+AGG - chr2_1:78554942-78554961 None:intergenic 40.0%
!! CAGGAAATTTTGACAGCTCT+AGG - chr2_1:78554955-78554974 None:intergenic 40.0%
CTAGAGCTGTCAAAATTTCC+TGG + chr2_1:78554953-78554972 Msa0227450:CDS 40.0%
TTCTTCTCCTCGTCATAGAT+GGG - chr2_1:78555018-78555037 None:intergenic 40.0%
TTTCTTCTCCTCGTCATAGA+TGG - chr2_1:78555019-78555038 None:intergenic 40.0%
CGAGGAGAAGAAAACTTTGT+TGG + chr2_1:78555026-78555045 Msa0227450:CDS 40.0%
!! GTTCTGGAATTACTTACCTG+AGG - chr2_1:78555135-78555154 None:intergenic 40.0%
CCGAAAGGACTTGTATGTTA+AGG - chr2_1:78555214-78555233 None:intergenic 40.0%
TTGTATAGCGTCAATCCGAA+AGG - chr2_1:78555229-78555248 None:intergenic 40.0%
CCTCAGATTCTTAGAGAGAA+AGG - chr2_1:78555836-78555855 None:intergenic 40.0%
! CCTTTCTCTCTAAGAATCTG+AGG + chr2_1:78555833-78555852 Msa0227450:intron 40.0%
CAACATAGCTAGTAGAATGC+TGG - chr2_1:78556091-78556110 None:intergenic 40.0%
TTTATCCCTTCTTCACCAGT+CGG + chr2_1:78556211-78556230 Msa0227450:intron 40.0%
! TTGTTGTGTGTAGGGTTTTG+TGG + chr2_1:78556328-78556347 Msa0227450:intron 40.0%
! TTTTGCAAACACCTTGTCCT+GGG - chr2_1:78556451-78556470 None:intergenic 40.0%
GCAAAAGATTGTTTGAGCGT+CGG + chr2_1:78556465-78556484 Msa0227450:CDS 40.0%
CAAAAGATTGTTTGAGCGTC+GGG + chr2_1:78556466-78556485 Msa0227450:CDS 40.0%
! AAAAGATTGTTTGAGCGTCG+GGG + chr2_1:78556467-78556486 Msa0227450:CDS 40.0%
GAATTCTTTATGGGGCTTTC+TGG + chr2_1:78556665-78556684 Msa0227450:CDS 40.0%
CTTGCAAGATAAGCAAGGAA+AGG - chr2_1:78556985-78557004 None:intergenic 40.0%
GAATGCTTGCAAGATAAGCA+AGG - chr2_1:78556990-78557009 None:intergenic 40.0%
CGGTGGTTCATATGGAAAAT+AGG - chr2_1:78557025-78557044 None:intergenic 40.0%
! GCATAACATGATGTGCCATT+TGG + chr2_1:78557197-78557216 Msa0227450:intron 40.0%
ACCCATAACCAGAAGAAATG+TGG - chr2_1:78557410-78557429 None:intergenic 40.0%
! ACATTTCTTCTGGTTATGGG+TGG + chr2_1:78557409-78557428 Msa0227450:intron 40.0%
!! AAGAGTCAGGGAGTACATTT+TGG + chr2_1:78557520-78557539 Msa0227450:intron 40.0%
ACTTCCAGCTTGTATCTCTT+AGG - chr2_1:78557626-78557645 None:intergenic 40.0%
!!! GAAGTCTTTTAGGGTGTGTT+TGG + chr2_1:78557641-78557660 Msa0227450:intron 40.0%
!!! TCTTTTAGGGTGTGTTTGGA+TGG + chr2_1:78557645-78557664 Msa0227450:intron 40.0%
TTGGATTGAGGGTTTAGAAG+GGG - chr2_1:78557867-78557886 None:intergenic 40.0%
GTTTGGATTGAGGGTTTAGA+AGG - chr2_1:78557869-78557888 None:intergenic 40.0%
AATACACCTCAGCTGTTGAA+TGG + chr2_1:78557928-78557947 Msa0227450:intron 40.0%
GTTGAACGCAGCATATAGTT+TGG - chr2_1:78558029-78558048 None:intergenic 40.0%
AGAAGAGAAGGATTAAGAGG+AGG - chr2_1:78558056-78558075 None:intergenic 40.0%
AGGAGAAGAGAAGGATTAAG+AGG - chr2_1:78558059-78558078 None:intergenic 40.0%
TCCATCATGCATTTGAATGG+CGG + chr2_1:78558373-78558392 Msa0227450:intron 40.0%
!! TCATACTTGCTGTGGCTAAT+TGG + chr2_1:78558462-78558481 Msa0227450:intron 40.0%
ACGTGTAAACCATTCTACTC+AGG + chr2_1:78558575-78558594 Msa0227450:intron 40.0%
! AATCACTAGCCTGAGTAGAA+TGG - chr2_1:78558587-78558606 None:intergenic 40.0%
TTCTACTCAGGCTAGTGATT+AGG + chr2_1:78558587-78558606 Msa0227450:intron 40.0%
AAAGATGTTAACCACTGCCT+GGG - chr2_1:78558795-78558814 None:intergenic 40.0%
GTTAACATCTTTGGCACTTG+AGG + chr2_1:78558803-78558822 Msa0227450:CDS 40.0%
CACTTGAGGTATGAATGTCA+TGG + chr2_1:78558817-78558836 Msa0227450:intron 40.0%
CAATCACAAGGACCTATGTA+AGG - chr2_1:78558973-78558992 None:intergenic 40.0%
CTTACATAGGTCCTTGTGAT+TGG + chr2_1:78558971-78558990 Msa0227450:intron 40.0%
! CAACCAAGTCTTTTCCCATT+AGG + chr2_1:78559110-78559129 Msa0227450:intron 40.0%
! CAAGTCTTTTCCCATTAGGT+GGG + chr2_1:78559114-78559133 Msa0227450:intron 40.0%
! TGACATTGATTGATCCATGC+AGG - chr2_1:78559144-78559163 None:intergenic 40.0%
AGGCGATTAAACCAGATAGA+GGG - chr2_1:78559290-78559309 None:intergenic 40.0%
AAGGCGATTAAACCAGATAG+AGG - chr2_1:78559291-78559310 None:intergenic 40.0%
ACTTAGTTGCAATTGGAGAC+TGG + chr2_1:78559407-78559426 Msa0227450:intron 40.0%
! ACTTGTATTCCCCTGTTTTG+AGG + chr2_1:78559517-78559536 Msa0227450:intron 40.0%
TTCCAGCAATCCTCAAAACA+GGG - chr2_1:78559530-78559549 None:intergenic 40.0%
TAACAGTAATTGAAGCCCCT+CGG + chr2_1:78559689-78559708 Msa0227450:CDS 40.0%
TCATTAAGTCTGATTGCCGA+GGG - chr2_1:78559708-78559727 None:intergenic 40.0%
ATCATTAAGTCTGATTGCCG+AGG - chr2_1:78559709-78559728 None:intergenic 40.0%
TTAGATACAACGCGAGATGT+TGG + chr2_1:78559817-78559836 Msa0227450:CDS 40.0%
! TGTTGGATCTCGTCTTTTCT+TGG + chr2_1:78559834-78559853 Msa0227450:CDS 40.0%
GACTTCCTGAAAGATACTTC+AGG - chr2_1:78559909-78559928 None:intergenic 40.0%
CAAATAATTGCCGCATGAGA+GGG - chr2_1:78559937-78559956 None:intergenic 40.0%
TCTCATGCGGCAATTATTTG+CGG + chr2_1:78559937-78559956 Msa0227450:CDS 40.0%
TGAAAGAACAGATGCATCTC+AGG - chr2_1:78560344-78560363 None:intergenic 40.0%
TTTGTGGCTCCGTATATATC+TGG + chr2_1:78560364-78560383 Msa0227450:intron 40.0%
TACCGTGGTCCAGATATATA+CGG - chr2_1:78560376-78560395 None:intergenic 40.0%
TTGTGTGAATTTGGAAGGCA+CGG - chr2_1:78560477-78560496 None:intergenic 40.0%
ACTCCTTGTGTGAATTTGGA+AGG - chr2_1:78560482-78560501 None:intergenic 40.0%
CTTTCACCAGTTATTACAGG+AGG + chr2_1:78560539-78560558 Msa0227450:intron 40.0%
ACCAGTTATTACAGGAGGTT+AGG + chr2_1:78560544-78560563 Msa0227450:intron 40.0%
CCAGTTATTACAGGAGGTTA+GGG + chr2_1:78560545-78560564 Msa0227450:intron 40.0%
GCAGATAATGACAGTCTGTT+TGG - chr2_1:78560593-78560612 None:intergenic 40.0%
AACCAGGTAAATGCACTGTT+GGG + chr2_1:78560764-78560783 Msa0227450:intron 40.0%
AAGTCGACAAACCATGGTAA+AGG + chr2_1:78560911-78560930 Msa0227450:intron 40.0%
TCCTGAGAAATAAACTCAGG+TGG + chr2_1:78560939-78560958 Msa0227450:intron 40.0%
! ACCACCTGAGTTTATTTCTC+AGG - chr2_1:78560943-78560962 None:intergenic 40.0%
GTCAGATGTCTGCAATAGAA+AGG + chr2_1:78561036-78561055 Msa0227450:intron 40.0%
ATGTCTTACAAAGGCCATTC+TGG + chr2_1:78561077-78561096 Msa0227450:intron 40.0%
TTTCTAACCTGTTGCCAGAA+TGG - chr2_1:78561094-78561113 None:intergenic 40.0%
! CAGCTTTATATGGTGAAGGT+TGG - chr2_1:78561196-78561215 None:intergenic 40.0%
AGCTGAAGAGGAACAATAGA+AGG + chr2_1:78561211-78561230 Msa0227450:intron 40.0%
TAAGTGGGTCACTCAAAGTA+TGG + chr2_1:78561270-78561289 Msa0227450:intron 40.0%
GCTATTCTCCTACACTTCAA+AGG - chr2_1:78561335-78561354 None:intergenic 40.0%
TCCTGATCTTGACAAACTCT+GGG - chr2_1:78561413-78561432 None:intergenic 40.0%
CATGAGGAGTAAATGAGTGA+AGG + chr2_1:78561467-78561486 Msa0227450:intron 40.0%
GGGTAGTTGAACGCAAAAAT+CGG - chr2_1:78561593-78561612 None:intergenic 40.0%
! TGCGTTCAACTACCCTATTT+TGG + chr2_1:78561598-78561617 Msa0227450:intron 40.0%
AAAGTGGAAATAGTGCGAGA+AGG + chr2_1:78561887-78561906 Msa0227450:intron 40.0%
TCTTTGACATGGCATGTCAT+TGG + chr2_1:78562104-78562123 Msa0227450:intron 40.0%
! GGGATAAGTTGGATTCACTA+TGG + chr2_1:78562331-78562350 Msa0227450:intron 40.0%
! AGTAGCTCCAACCTTTTGTT+AGG + chr2_1:78562434-78562453 Msa0227450:intron 40.0%
!! TTGAGTTTTGTGTTTAGGGC+TGG + chr2_1:78562635-78562654 Msa0227450:intron 40.0%
GCAAAGGTTATAGGAACCAA+AGG - chr2_1:78562789-78562808 None:intergenic 40.0%
! GGCTTTAGTGCAAAGGTTAT+AGG - chr2_1:78562798-78562817 None:intergenic 40.0%
AGCCCCTCTTCATTATTATG+GGG + chr2_1:78562814-78562833 Msa0227450:intron 40.0%
CTCCCCATAATAATGAAGAG+GGG - chr2_1:78562819-78562838 None:intergenic 40.0%
GCTCCCCATAATAATGAAGA+GGG - chr2_1:78562820-78562839 None:intergenic 40.0%
TGCTCCCCATAATAATGAAG+AGG - chr2_1:78562821-78562840 None:intergenic 40.0%
! CGTGAATTAGTTTATTCCCG+TGG + chr2_1:78562901-78562920 Msa0227450:intron 40.0%
! CATTTTCACAGATTCTCTGG+AGG - chr2_1:78562961-78562980 None:intergenic 40.0%
AATGCTGAGCTAGCAATTGA+CGG + chr2_1:78563034-78563053 Msa0227450:CDS 40.0%
ATCAACATCCATGTGGATCA+GGG - chr2_1:78563074-78563093 None:intergenic 40.0%
TCAAAAATAGCAGCCTTGAC+AGG - chr2_1:78563121-78563140 None:intergenic 40.0%
! AAGCAACTACGGTTTTCCAA+CGG + chr2_1:78563210-78563229 Msa0227450:CDS 40.0%
GTCCTCTGTTGCATTAAAGA+AGG + chr2_1:78563289-78563308 Msa0227450:CDS 40.0%
CACCTTCTTTAATGCAACAG+AGG - chr2_1:78563294-78563313 None:intergenic 40.0%
CTCTGTTGCATTAAAGAAGG+TGG + chr2_1:78563292-78563311 Msa0227450:CDS 40.0%
! TGTTTTCCAGCTGGATCAAA+TGG + chr2_1:78563322-78563341 Msa0227450:CDS 40.0%
! GTTTTCCAGCTGGATCAAAT+GGG + chr2_1:78563323-78563342 Msa0227450:CDS 40.0%
!!! CAGCGTAGGTTTTAAGTTCA+CGG + chr2_1:78563405-78563424 Msa0227450:CDS 40.0%
TTCACGGAAAATACACTCAC+TGG + chr2_1:78563421-78563440 Msa0227450:CDS 40.0%
AACCCATGGGTGTATATTTC+TGG + chr2_1:78563463-78563482 Msa0227450:CDS 40.0%
GTCCAGAAATATACACCCAT+GGG - chr2_1:78563468-78563487 None:intergenic 40.0%
TGCTATAAACTAAGCCAGTG+GGG - chr2_1:78563501-78563520 None:intergenic 40.0%
GTTGCTATAAACTAAGCCAG+TGG - chr2_1:78563503-78563522 None:intergenic 40.0%
TTGAGTACCTGTGCTAGATT+TGG + chr2_1:78563541-78563560 Msa0227450:CDS 40.0%
TGATACTTCATCCTCTGGTT+TGG + chr2_1:78563579-78563598 Msa0227450:CDS 40.0%
ACTGTCAAATTCCAAACCAG+AGG - chr2_1:78563593-78563612 None:intergenic 40.0%
TGGAATTTGACAGTAAAGGC+TGG + chr2_1:78563599-78563618 Msa0227450:CDS 40.0%
GGAATTTGACAGTAAAGGCT+GGG + chr2_1:78563600-78563619 Msa0227450:CDS 40.0%
GAATTTGACAGTAAAGGCTG+GGG + chr2_1:78563601-78563620 Msa0227450:CDS 40.0%
CTCAATGGTGTTCTCAGATT+TGG + chr2_1:78563718-78563737 Msa0227450:CDS 40.0%
ATATGCTGCAAAGAAGTTGC+TGG + chr2_1:78563822-78563841 Msa0227450:CDS 40.0%
AAGTAGATCCAAGTGCTTGA+AGG + chr2_1:78563909-78563928 Msa0227450:CDS 40.0%
AATTACCTCCTTCAAGCACT+TGG - chr2_1:78563920-78563939 None:intergenic 40.0%
AGCTCGACGACTCAAATATT+AGG + chr2_1:78564207-78564226 Msa0227450:CDS 40.0%
TATGCATCAATAGTGGCTCT+TGG + chr2_1:78564255-78564274 Msa0227450:CDS 40.0%
CTGGAATTCCTGGATATTGT+CGG + chr2_1:78564279-78564298 Msa0227450:CDS 40.0%
TCATTCATGGTGTGAGGTTT+AGG + chr2_1:78564613-78564632 Msa0227450:three_prime_UTR 40.0%
! AACGCTTCTGAAGGAGAGAA+AGG - chr2_1:78554483-78554502 None:intergenic 45.0%
!! AGTCTGAAAGCATTGATCGC+AGG - chr2_1:78554521-78554540 None:intergenic 45.0%
! GCATTTTTCTCCCTGAAGAC+TGG + chr2_1:78554699-78554718 Msa0227450:CDS 45.0%
AAGTGAAGGACCAGTCTTCA+GGG - chr2_1:78554712-78554731 None:intergenic 45.0%
AAAGTGAAGGACCAGTCTTC+AGG - chr2_1:78554713-78554732 None:intergenic 45.0%
! ACACCCTGACTCCATTTTCA+AGG + chr2_1:78554751-78554770 Msa0227450:CDS 45.0%
CTGTCCTTGAAAATGGAGTC+AGG - chr2_1:78554758-78554777 None:intergenic 45.0%
!! TTGTGTGTAGGGTTTTGTGG+AGG + chr2_1:78556331-78556350 Msa0227450:intron 45.0%
! GTTTTGTGGAGGACCAGTTT+GGG + chr2_1:78556342-78556361 Msa0227450:CDS 45.0%
ATTGCAAGGGCAGTAGAAGA+AGG + chr2_1:78556374-78556393 Msa0227450:CDS 45.0%
TTGCAAGGGCAGTAGAAGAA+GGG + chr2_1:78556375-78556394 Msa0227450:CDS 45.0%
! CTTTTGCAAACACCTTGTCC+TGG - chr2_1:78556452-78556471 None:intergenic 45.0%
GAGATCAGCCTATTTGTGCA+CGG + chr2_1:78556687-78556706 Msa0227450:CDS 45.0%
TATTTGTGCACGGACAGCTT+GGG + chr2_1:78556697-78556716 Msa0227450:CDS 45.0%
TCAACTTCGTCAACCTAACC+AGG + chr2_1:78556772-78556791 Msa0227450:CDS 45.0%
TCAAGAGATCAGCAGTTCTC+TGG + chr2_1:78556918-78556937 Msa0227450:CDS 45.0%
ATGGGTGGCACAATGTCATT+AGG + chr2_1:78557424-78557443 Msa0227450:intron 45.0%
!! GCTTGGGTTAGTAAGAGTCA+GGG + chr2_1:78557508-78557527 Msa0227450:intron 45.0%
!! AGTCAGGGAGTACATTTTGG+AGG + chr2_1:78557523-78557542 Msa0227450:intron 45.0%
! TTTAGGGTGTGTTTGGATGG+AGG + chr2_1:78557648-78557667 Msa0227450:intron 45.0%
TTAGGGTGTGTTTGGATGGA+GGG + chr2_1:78557649-78557668 Msa0227450:intron 45.0%
TGTGTTTGGATGGAGGGTTT+AGG + chr2_1:78557655-78557674 Msa0227450:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG + chr2_1:78557659-78557678 Msa0227450:intron 45.0%
TTGAGGGTTTAGAAGGGGAA+GGG - chr2_1:78557862-78557881 None:intergenic 45.0%
ATTGAGGGTTTAGAAGGGGA+AGG - chr2_1:78557863-78557882 None:intergenic 45.0%
!! GGAAGCATCTATAGTCTACC+AGG - chr2_1:78558335-78558354 None:intergenic 45.0%
CCATCATGCATTTGAATGGC+GGG + chr2_1:78558374-78558393 Msa0227450:intron 45.0%
TCAATAGCCGCATTCCTTGA+AGG - chr2_1:78558708-78558727 None:intergenic 45.0%
TCATCAACAATTGCAAGCCG+AGG - chr2_1:78558753-78558772 None:intergenic 45.0%
CAAAGATGTTAACCACTGCC+TGG - chr2_1:78558796-78558815 None:intergenic 45.0%
CAGGCAGTGGTTAACATCTT+TGG + chr2_1:78558794-78558813 Msa0227450:CDS 45.0%
AGGTATGAATGTCATGGCAG+TGG + chr2_1:78558823-78558842 Msa0227450:intron 45.0%
ACATAGGTCCTTGTGATTGG+AGG + chr2_1:78558974-78558993 Msa0227450:intron 45.0%
CCACCTAATGGGAAAAGACT+TGG - chr2_1:78559116-78559135 None:intergenic 45.0%
! CCAAGTCTTTTCCCATTAGG+TGG + chr2_1:78559113-78559132 Msa0227450:intron 45.0%
GGGATACGGAAGAAAACTAC+AGG - chr2_1:78559239-78559258 None:intergenic 45.0%
! AATTTAAGGCAGGGGGGATA+CGG - chr2_1:78559253-78559272 None:intergenic 45.0%
CGATTAAACCAGATAGAGGG+TGG - chr2_1:78559287-78559306 None:intergenic 45.0%
AGTTGCAATTGGAGACTGGT+TGG + chr2_1:78559411-78559430 Msa0227450:intron 45.0%
! CAATTGGAGACTGGTTGGTT+GGG + chr2_1:78559416-78559435 Msa0227450:intron 45.0%
TCCAGCAATCCTCAAAACAG+GGG - chr2_1:78559529-78559548 None:intergenic 45.0%
CTTCCAGCAATCCTCAAAAC+AGG - chr2_1:78559531-78559550 None:intergenic 45.0%
CATTAAGTCTGATTGCCGAG+GGG - chr2_1:78559707-78559726 None:intergenic 45.0%
GAAATTGAAGCCTCAAGTGG+TGG + chr2_1:78559741-78559760 Msa0227450:CDS 45.0%
CATCTCGCGTTGTATCTAAG+AGG - chr2_1:78559816-78559835 None:intergenic 45.0%
TTCAGGACTCCATTTGATCC+TGG - chr2_1:78559892-78559911 None:intergenic 45.0%
! GGAGTCCTGAAGTATCTTTC+AGG + chr2_1:78559901-78559920 Msa0227450:CDS 45.0%
GCAAATAATTGCCGCATGAG+AGG - chr2_1:78559938-78559957 None:intergenic 45.0%
!! TTGCGGACTGGTAAAGAACA+AGG + chr2_1:78559954-78559973 Msa0227450:CDS 45.0%
! GCTGACTTAGACTGTATGGT+AGG + chr2_1:78560000-78560019 Msa0227450:intron 45.0%
TGTATGGTAGGCTTCTGTTC+TGG + chr2_1:78560012-78560031 Msa0227450:intron 45.0%
CTCCGTATATATCTGGACCA+CGG + chr2_1:78560371-78560390 Msa0227450:intron 45.0%
! TGTGTGAATTTGGAAGGCAC+GGG - chr2_1:78560476-78560495 None:intergenic 45.0%
GTGCCTTCCAAATTCACACA+AGG + chr2_1:78560476-78560495 Msa0227450:intron 45.0%
CCCTAACCTCCTGTAATAAC+TGG - chr2_1:78560548-78560567 None:intergenic 45.0%
! CAGTCTGTTTGGTTCACTGT+TGG - chr2_1:78560582-78560601 None:intergenic 45.0%
CAACCAGGTAAATGCACTGT+TGG + chr2_1:78560763-78560782 Msa0227450:intron 45.0%
TTAAACAGTTCCCTCGAGCT+AGG - chr2_1:78560872-78560891 None:intergenic 45.0%
CGACTTCACAGGTTCCTATA+TGG - chr2_1:78560897-78560916 None:intergenic 45.0%
TCAGGAGAAGTCCTTTACCA+TGG - chr2_1:78560925-78560944 None:intergenic 45.0%
CTATTGCAGACATCTGACAC+TGG - chr2_1:78561034-78561053 None:intergenic 45.0%
TTGCATAATCCTTAGCCACC+AGG + chr2_1:78561137-78561156 Msa0227450:intron 45.0%
TGCATAATCCTTAGCCACCA+GGG + chr2_1:78561138-78561157 Msa0227450:intron 45.0%
! ATGGTGAAGGTTGGTCCTAA+TGG - chr2_1:78561187-78561206 None:intergenic 45.0%
AAGAGACCTTGGAGCTAAGT+GGG + chr2_1:78561255-78561274 Msa0227450:intron 45.0%
CTCCTGATCTTGACAAACTC+TGG - chr2_1:78561414-78561433 None:intergenic 45.0%
CAAGATCAGGAGAGTGATTG+TGG + chr2_1:78561422-78561441 Msa0227450:intron 45.0%
ACCATGAAGGAGAGTTTGAG+TGG + chr2_1:78561554-78561573 Msa0227450:intron 45.0%
ACCACTCAAACTCTCCTTCA+TGG - chr2_1:78561558-78561577 None:intergenic 45.0%
GAAACACGCAGTCACTTATG+CGG - chr2_1:78561970-78561989 None:intergenic 45.0%
!! GCGATGTTGCTTTGCAAGAT+CGG - chr2_1:78562189-78562208 None:intergenic 45.0%
AGGGACATCCAAGCTCATAA+AGG + chr2_1:78562272-78562291 Msa0227450:intron 45.0%
TGACAGGATCAGGGATAAGT+TGG + chr2_1:78562320-78562339 Msa0227450:intron 45.0%
GCTACTGTCATGTGAATTGG+AGG - chr2_1:78562420-78562439 None:intergenic 45.0%
GGAGCTACTGTCATGTGAAT+TGG - chr2_1:78562423-78562442 None:intergenic 45.0%
TTCTAGTCGTTGACCCAAAC+AGG - chr2_1:78562559-78562578 None:intergenic 45.0%
ATGCTGAGCTAGCAATTGAC+GGG + chr2_1:78563035-78563054 Msa0227450:CDS 45.0%
GCAATTGACGGGGTAGATAA+TGG + chr2_1:78563046-78563065 Msa0227450:CDS 45.0%
TAATGGTTCCCTGATCCACA+TGG + chr2_1:78563063-78563082 Msa0227450:CDS 45.0%
GATCAACATCCATGTGGATC+AGG - chr2_1:78563075-78563094 None:intergenic 45.0%
! TTTTCCAACGGATACCAGCA+CGG + chr2_1:78563222-78563241 Msa0227450:CDS 45.0%
TGATCCAGCTGGAAAACAGA+GGG - chr2_1:78563320-78563339 None:intergenic 45.0%
TTGATCCAGCTGGAAAACAG+AGG - chr2_1:78563321-78563340 None:intergenic 45.0%
TAGTTCCCATTTGATCCAGC+TGG - chr2_1:78563331-78563350 None:intergenic 45.0%
CGTGAACTTAAAACCTACGC+TGG - chr2_1:78563407-78563426 None:intergenic 45.0%
AATACACTCACTGGAGTCCT+TGG + chr2_1:78563430-78563449 Msa0227450:CDS 45.0%
! ATGGGTTTTTCACAGTGCCA+AGG - chr2_1:78563450-78563469 None:intergenic 45.0%
TTGGCACTGTGAAAAACCCA+TGG + chr2_1:78563449-78563468 Msa0227450:CDS 45.0%
TGGCACTGTGAAAAACCCAT+GGG + chr2_1:78563450-78563469 Msa0227450:CDS 45.0%
GGTCCAGAAATATACACCCA+TGG - chr2_1:78563469-78563488 None:intergenic 45.0%
TCTTGCACCAAATCTAGCAC+AGG - chr2_1:78563551-78563570 None:intergenic 45.0%
AGCAGAGACACAGAGAATGA+TGG - chr2_1:78563676-78563695 None:intergenic 45.0%
TCATTCTCTGTGTCTCTGCT+CGG + chr2_1:78563676-78563695 Msa0227450:CDS 45.0%
ATGTGTCAACCAAACCCAAC+TGG - chr2_1:78563759-78563778 None:intergenic 45.0%
TAGATCCAAGTGCTTGAAGG+AGG + chr2_1:78563912-78563931 Msa0227450:CDS 45.0%
!! TTTTGGGGGAATACTTCCCT+AGG + chr2_1:78564037-78564056 Msa0227450:intron 45.0%
! TTTGAGATAGGCGGAAGGTT+TGG - chr2_1:78564120-78564139 None:intergenic 45.0%
!!! GTCTTTTTGAGATAGGCGGA+AGG - chr2_1:78564125-78564144 None:intergenic 45.0%
TCAAAAGGTGAAGTCAGCCA+AGG + chr2_1:78564164-78564183 Msa0227450:CDS 45.0%
TTTCCACAGTGGCATTTCCT+TGG - chr2_1:78564184-78564203 None:intergenic 45.0%
!! GTCGAGCTTTATTTCCACAG+TGG - chr2_1:78564195-78564214 None:intergenic 45.0%
TAAACCTGTGGCTTCGAGAA+TGG - chr2_1:78564237-78564256 None:intergenic 45.0%
ATCAATAGTGGCTCTTGGAC+TGG + chr2_1:78564260-78564279 Msa0227450:CDS 45.0%
CGATAGACCGTGTTAACAAG+AGG - chr2_1:78564483-78564502 None:intergenic 45.0%
CCTGTCCTACAGATAGTACT+AGG - chr2_1:78564659-78564678 None:intergenic 45.0%
CCTAGTACTATCTGTAGGAC+AGG + chr2_1:78564656-78564675 Msa0227450:three_prime_UTR 45.0%
!!! AATTTTTTATTAAAACAAAT+GGG + chr2_1:78555748-78555767 Msa0227450:intron 5.0%
TGCAGGAACTCATCCACTGT+CGG - chr2_1:78554364-78554383 None:intergenic 50.0%
CAATGATCTGAGTGCGGCAT+AGG - chr2_1:78554413-78554432 None:intergenic 50.0%
CTCCAGCAATGATCTGAGTG+CGG - chr2_1:78554419-78554438 None:intergenic 50.0%
GCACTCAGATCATTGCTGGA+GGG + chr2_1:78554418-78554437 Msa0227450:CDS 50.0%
ATCATTGCTGGAGGGTCTTG+AGG + chr2_1:78554426-78554445 Msa0227450:CDS 50.0%
AGAAAGGAAGATCCGAGCCT+GGG - chr2_1:78554467-78554486 None:intergenic 50.0%
CCACTTCTCAGCTATGGCAA+TGG - chr2_1:78554819-78554838 None:intergenic 50.0%
CCATTGCCATAGCTGAGAAG+TGG + chr2_1:78554816-78554835 Msa0227450:CDS 50.0%
AGGTAGCCACTTCTCAGCTA+TGG - chr2_1:78554825-78554844 None:intergenic 50.0%
TGAGAAGTGGCTACCTTCCA+AGG + chr2_1:78554829-78554848 Msa0227450:CDS 50.0%
CAAGACCGACTGGTGAAGAA+GGG - chr2_1:78556219-78556238 None:intergenic 50.0%
TCAAAACTGCCAAGACCGAC+TGG - chr2_1:78556229-78556248 None:intergenic 50.0%
!! GGTTTTGTGGAGGACCAGTT+TGG + chr2_1:78556341-78556360 Msa0227450:CDS 50.0%
TTTAATATGGGAGGTCGCCC+AGG + chr2_1:78556431-78556450 Msa0227450:CDS 50.0%
! TGAGATGTACTGGTACAGGC+TGG + chr2_1:78556587-78556606 Msa0227450:intron 50.0%
CAAGCTGTCCGTGCACAAAT+AGG - chr2_1:78556698-78556717 None:intergenic 50.0%
CTATTTGTGCACGGACAGCT+TGG + chr2_1:78556696-78556715 Msa0227450:CDS 50.0%
GCTTGGGCTTATGGAAAGTC+TGG + chr2_1:78556713-78556732 Msa0227450:CDS 50.0%
TGGGCTTATGGAAAGTCTGG+TGG + chr2_1:78556716-78556735 Msa0227450:CDS 50.0%
CTTCGTCAACCTAACCAGGT+CGG + chr2_1:78556776-78556795 Msa0227450:intron 50.0%
!! GTTTTGGTGAACAACCGACC+TGG - chr2_1:78556793-78556812 None:intergenic 50.0%
TTTCCATATGAACCACCGGC+TGG + chr2_1:78557027-78557046 Msa0227450:CDS 50.0%
CACTGGCAGTGAGTGGAATA+TGG - chr2_1:78557101-78557120 None:intergenic 50.0%
CTTCTTACACTGGCAGTGAG+TGG - chr2_1:78557108-78557127 None:intergenic 50.0%
!! GCGCTGGTTTCTTCTTACAC+TGG - chr2_1:78557118-78557137 None:intergenic 50.0%
!! GGCTTGGGTTAGTAAGAGTC+AGG + chr2_1:78557507-78557526 Msa0227450:intron 50.0%
GTTTGGATGGAGGGTTTAGG+AGG + chr2_1:78557658-78557677 Msa0227450:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG + chr2_1:78557660-78557679 Msa0227450:intron 50.0%
GTTCTGCCATTCAACAGCTG+AGG - chr2_1:78557937-78557956 None:intergenic 50.0%
CCCGCCATTCAAATGCATGA+TGG - chr2_1:78558377-78558396 None:intergenic 50.0%
CTCTTCGCTTGTTCTCACCT+CGG + chr2_1:78558733-78558752 Msa0227450:CDS 50.0%
ATGTTAACCACTGCCTGGGT+AGG - chr2_1:78558791-78558810 None:intergenic 50.0%
GTAGTAGGCCTCCAATCACA+AGG - chr2_1:78558985-78559004 None:intergenic 50.0%
TGCAGGTGATCCCACCTAAT+GGG - chr2_1:78559127-78559146 None:intergenic 50.0%
ATGCAGGTGATCCCACCTAA+TGG - chr2_1:78559128-78559147 None:intergenic 50.0%
ATTAGGTGGGATCACCTGCA+TGG + chr2_1:78559127-78559146 Msa0227450:intron 50.0%
!! ATGGAACTGAAGCGCTGGTA+AGG - chr2_1:78559310-78559329 None:intergenic 50.0%
GTTGTATGGAACTGAAGCGC+TGG - chr2_1:78559315-78559334 None:intergenic 50.0%
! GCAATTGGAGACTGGTTGGT+TGG + chr2_1:78559415-78559434 Msa0227450:intron 50.0%
!!! TCCCCTGTTTTGAGGATTGC+TGG + chr2_1:78559525-78559544 Msa0227450:intron 50.0%
ATTCCAGTCACCACCACTTG+AGG - chr2_1:78559754-78559773 None:intergenic 50.0%
TTTGAGCTATCCAGCCTTCC+AGG + chr2_1:78559871-78559890 Msa0227450:CDS 50.0%
TCCAGCCTTCCAGGATCAAA+TGG + chr2_1:78559880-78559899 Msa0227450:CDS 50.0%
TCCATTTGATCCTGGAAGGC+TGG - chr2_1:78559884-78559903 None:intergenic 50.0%
GGACTCCATTTGATCCTGGA+AGG - chr2_1:78559888-78559907 None:intergenic 50.0%
AAGTCCTCTACCCTCTCATG+CGG + chr2_1:78559924-78559943 Msa0227450:CDS 50.0%
TGCGGCAATTATTTGCGGAC+TGG + chr2_1:78559942-78559961 Msa0227450:CDS 50.0%
GCTGAAAAGCAAGAAGCTCG+TGG - chr2_1:78560222-78560241 None:intergenic 50.0%
!! CGAGCTTCTTGCTTTTCAGC+TGG + chr2_1:78560222-78560241 Msa0227450:CDS 50.0%
GCACGGGATAACAGGGAATT+AGG - chr2_1:78560460-78560479 None:intergenic 50.0%
! TTGGAAGGCACGGGATAACA+GGG - chr2_1:78560467-78560486 None:intergenic 50.0%
! TTTGGAAGGCACGGGATAAC+AGG - chr2_1:78560468-78560487 None:intergenic 50.0%
AGCCCAACAGTGCATTTACC+TGG - chr2_1:78560769-78560788 None:intergenic 50.0%
AATCGACCAAACCTAGCTCG+AGG + chr2_1:78560858-78560877 Msa0227450:intron 50.0%
ATCGACCAAACCTAGCTCGA+GGG + chr2_1:78560859-78560878 Msa0227450:intron 50.0%
!! CCATGGTTTGTCGACTTCAC+AGG - chr2_1:78560908-78560927 None:intergenic 50.0%
CCTGTGAAGTCGACAAACCA+TGG + chr2_1:78560905-78560924 Msa0227450:intron 50.0%
ACAAAGGCCATTCTGGCAAC+AGG + chr2_1:78561084-78561103 Msa0227450:intron 50.0%
GCATAATCCTTAGCCACCAG+GGG + chr2_1:78561139-78561158 Msa0227450:intron 50.0%
! TGATTGACTTAAGGCTCCCC+TGG - chr2_1:78561158-78561177 None:intergenic 50.0%
GAAGAGACCTTGGAGCTAAG+TGG + chr2_1:78561254-78561273 Msa0227450:intron 50.0%
GCCCAGAGTTTGTCAAGATC+AGG + chr2_1:78561409-78561428 Msa0227450:intron 50.0%
TCAGGATGGATCATGGGGTA+GGG - chr2_1:78562163-78562182 None:intergenic 50.0%
TTCAGGATGGATCATGGGGT+AGG - chr2_1:78562164-78562183 None:intergenic 50.0%
GGACTTCAGGATGGATCATG+GGG - chr2_1:78562168-78562187 None:intergenic 50.0%
CGGACTTCAGGATGGATCAT+GGG - chr2_1:78562169-78562188 None:intergenic 50.0%
TCGGACTTCAGGATGGATCA+TGG - chr2_1:78562170-78562189 None:intergenic 50.0%
TGCAAGATCGGACTTCAGGA+TGG - chr2_1:78562177-78562196 None:intergenic 50.0%
GCTTTGCAAGATCGGACTTC+AGG - chr2_1:78562181-78562200 None:intergenic 50.0%
! GAAGAGGGGCTTTAGTGCAA+AGG - chr2_1:78562805-78562824 None:intergenic 50.0%
TGCTGAGCTAGCAATTGACG+GGG + chr2_1:78563036-78563055 Msa0227450:CDS 50.0%
ATAGCAGCCTTGACAGGAGA+TGG - chr2_1:78563115-78563134 None:intergenic 50.0%
AAACCTACGCTGGCATCAGT+AGG - chr2_1:78563397-78563416 None:intergenic 50.0%
! AAGCCAGTGGGGTTGATTGT+AGG - chr2_1:78563490-78563509 None:intergenic 50.0%
TTTGACAGTAAAGGCTGGGG+TGG + chr2_1:78563604-78563623 Msa0227450:CDS 50.0%
! GTGTGCTGGCATTTCTGTTG+TGG + chr2_1:78564094-78564113 Msa0227450:CDS 50.0%
AATGCCATTCTCGAAGCCAC+AGG + chr2_1:78564230-78564249 Msa0227450:CDS 50.0%
CAGATTGCGAGCACTTCTGC+AGG - chr2_1:78554381-78554400 None:intergenic 55.0%
!! CTGCAGAAGTGCTCGCAATC+TGG + chr2_1:78554379-78554398 Msa0227450:CDS 55.0%
TGCCGCACTCAGATCATTGC+TGG + chr2_1:78554414-78554433 Msa0227450:CDS 55.0%
CGCACTCAGATCATTGCTGG+AGG + chr2_1:78554417-78554436 Msa0227450:CDS 55.0%
GAGAAAGGAAGATCCGAGCC+TGG - chr2_1:78554468-78554487 None:intergenic 55.0%
TGGTGGGGAAACGCTTCTGA+AGG - chr2_1:78554492-78554511 None:intergenic 55.0%
!! TCAGAAGCGTTTCCCCACCA+AGG + chr2_1:78554492-78554511 Msa0227450:CDS 55.0%
TGATCGCAGGAGTCCTTGGT+GGG - chr2_1:78554508-78554527 None:intergenic 55.0%
TTGATCGCAGGAGTCCTTGG+TGG - chr2_1:78554509-78554528 None:intergenic 55.0%
! GCATTGATCGCAGGAGTCCT+TGG - chr2_1:78554512-78554531 None:intergenic 55.0%
! CATTGCATTGCAGGGCACCA+AGG + chr2_1:78554644-78554663 Msa0227450:intron 55.0%
CGGACAACCCATCTATGACG+AGG + chr2_1:78555008-78555027 Msa0227450:CDS 55.0%
CCAAGACCGACTGGTGAAGA+AGG - chr2_1:78556220-78556239 None:intergenic 55.0%
CCTTCTTCACCAGTCGGTCT+TGG + chr2_1:78556217-78556236 Msa0227450:intron 55.0%
! GTGGAGGACCAGTTTGGGTT+AGG + chr2_1:78556347-78556366 Msa0227450:CDS 55.0%
GGTGAACAACCGACCTGGTT+AGG - chr2_1:78556788-78556807 None:intergenic 55.0%
CTTCCAGCCGGTGGTTCATA+TGG - chr2_1:78557033-78557052 None:intergenic 55.0%
CGCTTCCGCAATCTCATTGC+TGG + chr2_1:78557057-78557076 Msa0227450:CDS 55.0%
ATGGAGGGTTTAGGAGGGGA+AGG + chr2_1:78557664-78557683 Msa0227450:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG + chr2_1:78557665-78557684 Msa0227450:intron 55.0%
GGTTTAGAAGGGGAAGGGAG+GGG - chr2_1:78557857-78557876 None:intergenic 55.0%
GGGTTTAGAAGGGGAAGGGA+GGG - chr2_1:78557858-78557877 None:intergenic 55.0%
AGGGTTTAGAAGGGGAAGGG+AGG - chr2_1:78557859-78557878 None:intergenic 55.0%
! ATCTGACTCGACACCTACCC+AGG + chr2_1:78558775-78558794 Msa0227450:CDS 55.0%
CTACTGGACCACCCTCTATC+TGG + chr2_1:78559276-78559295 Msa0227450:intron 55.0%
! AAGCCTCAAGTGGTGGTGAC+TGG + chr2_1:78559748-78559767 Msa0227450:CDS 55.0%
ATTGCCGCATGAGAGGGTAG+AGG - chr2_1:78559931-78559950 None:intergenic 55.0%
!! TTGCTTTTCAGCTGGCCTGC+CGG + chr2_1:78560230-78560249 Msa0227450:CDS 55.0%
ACAGGCAGACAGACCTCAGA+AGG - chr2_1:78560262-78560281 None:intergenic 55.0%
CAGTTCCCTCGAGCTAGGTT+TGG - chr2_1:78560867-78560886 None:intergenic 55.0%
TTGACTTAAGGCTCCCCTGG+TGG - chr2_1:78561155-78561174 None:intergenic 55.0%
GAGTGACCCACTTAGCTCCA+AGG - chr2_1:78561264-78561283 None:intergenic 55.0%
ATGGGGTAGGGTGCGTCTAA+TGG - chr2_1:78562151-78562170 None:intergenic 55.0%
GCCTGTTCCATCTCCTGTCA+AGG + chr2_1:78563105-78563124 Msa0227450:CDS 55.0%
GCCTTGACAGGAGATGGAAC+AGG - chr2_1:78563109-78563128 None:intergenic 55.0%
! AACTCCGTGCTGGTATCCGT+TGG - chr2_1:78563229-78563248 None:intergenic 55.0%
GTTCCTACTGATGCCAGCGT+AGG + chr2_1:78563391-78563410 Msa0227450:CDS 55.0%
GGACCTACAATCAACCCCAC+TGG + chr2_1:78563484-78563503 Msa0227450:CDS 55.0%
TTCTCTGTGTCTCTGCTCGG+AGG + chr2_1:78563679-78563698 Msa0227450:CDS 55.0%
GTTGCTGGAGCTTAGAGAGC+AGG + chr2_1:78563837-78563856 Msa0227450:CDS 55.0%
CCGCTCTTCTCAAGTGCCTA+GGG - chr2_1:78564056-78564075 None:intergenic 55.0%
CCCTAGGCACTTGAGAAGAG+CGG + chr2_1:78564053-78564072 Msa0227450:intron 55.0%
ACCGCTCTTCTCAAGTGCCT+AGG - chr2_1:78564057-78564076 None:intergenic 55.0%
AGGCACTTGAGAAGAGCGGT+TGG + chr2_1:78564057-78564076 Msa0227450:intron 55.0%
GGCACTTGAGAAGAGCGGTT+GGG + chr2_1:78564058-78564077 Msa0227450:intron 55.0%
GACGTGCTTGAATCGTGTGC+TGG + chr2_1:78564080-78564099 Msa0227450:CDS 55.0%
CAGCCAAGGAAATGCCACTG+TGG + chr2_1:78564178-78564197 Msa0227450:CDS 55.0%
! GGCTCTTGGACTGGAATTCC+TGG + chr2_1:78564269-78564288 Msa0227450:CDS 55.0%
GCTGGAGGGTCTTGAGGATC+TGG + chr2_1:78554432-78554451 Msa0227450:CDS 60.0%
GGATCTGGAAACCCGTTCCC+AGG + chr2_1:78554447-78554466 Msa0227450:CDS 60.0%
TGGAAACCCGTTCCCAGGCT+CGG + chr2_1:78554452-78554471 Msa0227450:CDS 60.0%
GAAGATCCGAGCCTGGGAAC+GGG - chr2_1:78554461-78554480 None:intergenic 60.0%
GGAAGATCCGAGCCTGGGAA+CGG - chr2_1:78554462-78554481 None:intergenic 60.0%
GATCGCAGGAGTCCTTGGTG+GGG - chr2_1:78554507-78554526 None:intergenic 60.0%
GCACGGACAGCTTGGGCTTA+TGG + chr2_1:78556704-78556723 Msa0227450:CDS 60.0%
AAGCGTTTGCTTCCAGCCGG+TGG - chr2_1:78557042-78557061 None:intergenic 60.0%
!! CGGAAGCGTTTGCTTCCAGC+CGG - chr2_1:78557045-78557064 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr2_1:78557668-78557687 Msa0227450:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr2_1:78557669-78557688 Msa0227450:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr2_1:78557670-78557689 Msa0227450:intron 60.0%
TAGAAGGGGAAGGGAGGGGA+GGG - chr2_1:78557853-78557872 None:intergenic 60.0%
TTAGAAGGGGAAGGGAGGGG+AGG - chr2_1:78557854-78557873 None:intergenic 60.0%
! GGAGACTGGTTGGTTGGGAG+AGG + chr2_1:78559421-78559440 Msa0227450:intron 60.0%
! CTGGTTGGTTGGGAGAGGCT+AGG + chr2_1:78559426-78559445 Msa0227450:intron 60.0%
! AGACCTCAGAAGGTGCACGC+CGG - chr2_1:78560252-78560271 None:intergenic 60.0%
TAAGGCTCCCCTGGTGGCTA+AGG - chr2_1:78561149-78561168 None:intergenic 60.0%
! GGCACCCTCTGTTTTCCAGC+TGG + chr2_1:78563313-78563332 Msa0227450:CDS 60.0%
ACAGTAAAGGCTGGGGTGGC+TGG + chr2_1:78563608-78563627 Msa0227450:CDS 60.0%
CAGTAAAGGCTGGGGTGGCT+GGG + chr2_1:78563609-78563628 Msa0227450:CDS 60.0%
ATGGGAGGTCGCCCAGGACA+AGG + chr2_1:78556437-78556456 Msa0227450:CDS 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr2_1:78557673-78557692 Msa0227450:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr2_1:78557674-78557693 Msa0227450:intron 65.0%
CTCGACACCTACCCAGGCAG+TGG + chr2_1:78558781-78558800 Msa0227450:CDS 65.0%
AGGCTGGGGTGGCTGGGATT+TGG + chr2_1:78563615-78563634 Msa0227450:CDS 65.0%
CTGGGGTGGCTGGGATTTGG+AGG + chr2_1:78563618-78563637 Msa0227450:CDS 65.0%
GGGTTGGACGACGCCGACAG+TGG + chr2_1:78554348-78554367 Msa0227450:CDS 70.0%
! CTCAGAAGGTGCACGCCGGC+AGG - chr2_1:78560248-78560267 None:intergenic 70.0%
CTGCCGGCGTGCACCTTCTG+AGG + chr2_1:78560246-78560265 Msa0227450:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 78554194 78564754 78554194 ID=Msa0227450;Name=Msa0227450
chr2_1 mRNA 78554194 78564754 78554194 ID=Msa0227450-mRNA-1;Parent=Msa0227450;Name=Msa0227450-mRNA-1;_AED=0.03;_eAED=0.03;_QI=152|0.90|0.83|1|0.90|0.83|12|372|1098
chr2_1 exon 78554194 78554583 78554194 ID=Msa0227450-mRNA-1:exon:23890;Parent=Msa0227450-mRNA-1
chr2_1 exon 78554657 78554850 78554657 ID=Msa0227450-mRNA-1:exon:23891;Parent=Msa0227450-mRNA-1
chr2_1 exon 78554931 78555137 78554931 ID=Msa0227450-mRNA-1:exon:23892;Parent=Msa0227450-mRNA-1
chr2_1 exon 78555964 78556059 78555964 ID=Msa0227450-mRNA-1:exon:23893;Parent=Msa0227450-mRNA-1
chr2_1 exon 78556341 78556533 78556341 ID=Msa0227450-mRNA-1:exon:23894;Parent=Msa0227450-mRNA-1
chr2_1 exon 78556591 78556793 78556591 ID=Msa0227450-mRNA-1:exon:23895;Parent=Msa0227450-mRNA-1
chr2_1 exon 78556883 78557119 78556883 ID=Msa0227450-mRNA-1:exon:23896;Parent=Msa0227450-mRNA-1
chr2_1 exon 78558690 78558824 78558690 ID=Msa0227450-mRNA-1:exon:23897;Parent=Msa0227450-mRNA-1
chr2_1 exon 78559655 78559975 78559655 ID=Msa0227450-mRNA-1:exon:23898;Parent=Msa0227450-mRNA-1
chr2_1 exon 78560088 78560267 78560088 ID=Msa0227450-mRNA-1:exon:23899;Parent=Msa0227450-mRNA-1
chr2_1 exon 78562965 78563933 78562965 ID=Msa0227450-mRNA-1:exon:23900;Parent=Msa0227450-mRNA-1
chr2_1 exon 78564059 78564754 78564059 ID=Msa0227450-mRNA-1:exon:23901;Parent=Msa0227450-mRNA-1
chr2_1 five_prime_UTR 78554194 78554345 78554194 ID=Msa0227450-mRNA-1:five_prime_utr;Parent=Msa0227450-mRNA-1
chr2_1 CDS 78554346 78554583 78554346 ID=Msa0227450-mRNA-1:cds;Parent=Msa0227450-mRNA-1
chr2_1 CDS 78554657 78554850 78554657 ID=Msa0227450-mRNA-1:cds;Parent=Msa0227450-mRNA-1
chr2_1 CDS 78554931 78555137 78554931 ID=Msa0227450-mRNA-1:cds;Parent=Msa0227450-mRNA-1
chr2_1 CDS 78555964 78556059 78555964 ID=Msa0227450-mRNA-1:cds;Parent=Msa0227450-mRNA-1
chr2_1 CDS 78556341 78556533 78556341 ID=Msa0227450-mRNA-1:cds;Parent=Msa0227450-mRNA-1
chr2_1 CDS 78556591 78556793 78556591 ID=Msa0227450-mRNA-1:cds;Parent=Msa0227450-mRNA-1
chr2_1 CDS 78556883 78557119 78556883 ID=Msa0227450-mRNA-1:cds;Parent=Msa0227450-mRNA-1
chr2_1 CDS 78558690 78558824 78558690 ID=Msa0227450-mRNA-1:cds;Parent=Msa0227450-mRNA-1
chr2_1 CDS 78559655 78559975 78559655 ID=Msa0227450-mRNA-1:cds;Parent=Msa0227450-mRNA-1
chr2_1 CDS 78560088 78560267 78560088 ID=Msa0227450-mRNA-1:cds;Parent=Msa0227450-mRNA-1
chr2_1 CDS 78562965 78563933 78562965 ID=Msa0227450-mRNA-1:cds;Parent=Msa0227450-mRNA-1
chr2_1 CDS 78564059 78564382 78564059 ID=Msa0227450-mRNA-1:cds;Parent=Msa0227450-mRNA-1
chr2_1 three_prime_UTR 78564383 78564754 78564383 ID=Msa0227450-mRNA-1:three_prime_utr;Parent=Msa0227450-mRNA-1
Gene Sequence

>Msa0227450

ATGGGTTGGACGACGCCGACAGTGGATGAGTTCCTGCAGAAGTGCTCGCAATCTGGCGACGCTGCCTATGCCGCACTCAGATCATTGCTGGAGGGTCTTGAGGATCTGGAAACCCGTTCCCAGGCTCGGATCTTCCTTTCTCTCCTTCAGAAGCGTTTCCCCACCAAGGACTCCTGCGATCAATGCTTTCAGACTTACCATTTTCGTATTGAAGACATCTTATTGGATCAATACGAGGGGCACCAAGGTAGAAATAAATTGACTATGATGGTGATTCCTAGCATTTTTCTCCCTGAAGACTGGTCCTTCACTTTTTATGAAGGGATTAATAGACACCCTGACTCCATTTTCAAGGACAGAATTGTTTCTGAGTTAGGTTGTGGAAATGGATGGATATCCATTGCCATAGCTGAGAAGTGGCTACCTTCCAAGGTCTATGGCCTTGATATCAATCCTAGAGCTGTCAAAATTTCCTGGATAAACCTATACTTGAATGCTTTAGATGAAAACGGACAACCCATCTATGACGAGGAGAAGAAAACTTTGTTGGACAGGGTAGAGTTTCACGAATCTGATCTTCTATCCTATTGCAGAGATAATGGAATTCAACTTGAAAGAATTGTAGGATGTATTCCTCAGATTCTTAATCCAAATCCAGATGCAATGACTAAGATGATAACAGAAAATGCTAGTGAGGAATTCCTTCATTCTCTGAGTAATTATTGTGCACTTCAGGGTTTTGTGGAGGACCAGTTTGGGTTAGGTTTAATTGCAAGGGCAGTAGAAGAAGGGATATCAGTAATCAAACCAAATGGAATTATGATCTTTAATATGGGAGGTCGCCCAGGACAAGGTGTTTGCAAAAGATTGTTTGAGCGTCGGGGTTTTCGCATTACAAAGCTTTGGCAAACTAAAATCATTCAGGCTAATGTACTGGTACAGGCTGGTGACACAGATATTGCAGCCTTAGTTGAAATTGAGAAGAACAGCCCACACCGTTTTGAATTCTTTATGGGGCTTTCTGGAGATCAGCCTATTTGTGCACGGACAGCTTGGGCTTATGGAAAGTCTGGTGGCAGCATTTCCCATGCTTTATCAGTTTACAGTTGTCAACTTCGTCAACCTAACCAGGTTAAAGTTATATTTGAGTTTCTGAAAAATGGATTTCAAGAGATCAGCAGTTCTCTGGATTTGTATTTTGAGGATGATTCTGTTGCTGATGAAAAAATTCCTTTCCTTGCTTATCTTGCAAGCATTCTAAAAGATGATTCCTATTTTCCATATGAACCACCGGCTGGAAGCAAACGCTTCCGCAATCTCATTGCTGGATTTTTGAAGACATATCACCATATTCCACTCACTGCCAGTAATGTTGTCATTTTTCCTTCAAGGAATGCGGCTATTGAGAATGCTCTTCGCTTGTTCTCACCTCGGCTTGCAATTGTTGATGAACATCTGACTCGACACCTACCCAGGCAGTGGTTAACATCTTTGGCACTTGAGAATATGGGATCTATTGACTCTTTAGATGATACAATAACAGTAATTGAAGCCCCTCGGCAATCAGACTTAATGATAGAACTAATAAAGAAATTGAAGCCTCAAGTGGTGGTGACTGGAATTGCTATTTTTGAGGCTGTTACTAGTTCAGCTTTTGTGCACCTCTTAGATACAACGCGAGATGTTGGATCTCGTCTTTTCTTGGACATATCAGATCACTTTGAGCTATCCAGCCTTCCAGGATCAAATGGAGTCCTGAAGTATCTTTCAGGAAGTCCTCTACCCTCTCATGCGGCAATTATTTGCGGACTGGTAAAGAACAAGGTTTATCCAGATTTAGAAGTAGCTTTTGTCATTTCAGAAGAAGAGTCTCTCTTTAATGCATTGTCCAAAACTGTTGAGTTACTAGAAGGCAATACCGCATTAATCAGTCAGTACTATTATGGCTGTATTTTCCACGAGCTTCTTGCTTTTCAGCTGGCCTGCCGGCGTGCACCTTCTGAGAGAATCTGTGAAAATGTCAAATCAGTTGATATGATAGGATTTGCTAAATCAGCCGTATCAGTTCTTAATAATGCTGAGCTAGCAATTGACGGGGTAGATAATGGTTCCCTGATCCACATGGATGTTGATCAAATCTTTTTGCCTGTTCCATCTCCTGTCAAGGCTGCTATTTTTGAAAGTTTTGCTCGACAAAATATGTCTGAGTCTGAAATTGATGTCACCACAAGCATAAAAAAATTCGTCAAAAGCAACTACGGTTTTCCAACGGATACCAGCACGGAGTTTATATATTCTGACAATTCAAAAGCTCTTTTCAACAAACTGGTCCTCTGTTGCATTAAAGAAGGTGGCACCCTCTGTTTTCCAGCTGGATCAAATGGGAACTATGTTTCTTCTGCTACATTTTTGAAAGCTGACATAGTGACAGTTCCTACTGATGCCAGCGTAGGTTTTAAGTTCACGGAAAATACACTCACTGGAGTCCTTGGCACTGTGAAAAACCCATGGGTGTATATTTCTGGACCTACAATCAACCCCACTGGCTTAGTTTATAGCAACAAGGAGATAGGGGAGATTTTGAGTACCTGTGCTAGATTTGGTGCAAGAGTTATAATTGATACTTCATCCTCTGGTTTGGAATTTGACAGTAAAGGCTGGGGTGGCTGGGATTTGGAGGAGTGTTTGTCTAAGCTGAATTCTTCATTCAAGCCATCATTCTCTGTGTCTCTGCTCGGAGGATTGTCTCTTAAGATGCTCAATGGTGTTCTCAGATTTGGGTTTCTTATTCTTAACCAGTTGGGTTTGGTTGACACATTTTATAGTTTTCCGGGATTAAGTAAACCTCATAGTACTGTTAAATATGCTGCAAAGAAGTTGCTGGAGCTTAGAGAGCAGGAATCATCAATTCTATCAGATGCTATTGTTGAACATACACAGATTTTGAGAAGTAGATCCAAGTGCTTGAAGGAGGCACTTGAGAAGAGCGGTTGGGACGTGCTTGAATCGTGTGCTGGCATTTCTGTTGTGGCCAAACCTTCCGCCTATCTCAAAAAGACTATTAAGCTGAAGATTTCATCAAAAGGTGAAGTCAGCCAAGGAAATGCCACTGTGGAAATAAAGCTCGACGACTCAAATATTAGGAATGCCATTCTCGAAGCCACAGGTTTATGCATCAATAGTGGCTCTTGGACTGGAATTCCTGGATATTGTCGGTTCAATATTGCACTTGAAGAAAATGATTTCAAGAAAGCACTGGATTGTATACTAAAATTTAGAGAAGTTGCACTAGGTTAA
Protein sequence

>Msa0227450

MGWTTPTVDEFLQKCSQSGDAAYAALRSLLEGLEDLETRSQARIFLSLLQKRFPTKDSCDQCFQTYHFRIEDILLDQYEGHQGRNKLTMMVIPSIFLPEDWSFTFYEGINRHPDSIFKDRIVSELGCGNGWISIAIAEKWLPSKVYGLDINPRAVKISWINLYLNALDENGQPIYDEEKKTLLDRVEFHESDLLSYCRDNGIQLERIVGCIPQILNPNPDAMTKMITENASEEFLHSLSNYCALQGFVEDQFGLGLIARAVEEGISVIKPNGIMIFNMGGRPGQGVCKRLFERRGFRITKLWQTKIIQANVLVQAGDTDIAALVEIEKNSPHRFEFFMGLSGDQPICARTAWAYGKSGGSISHALSVYSCQLRQPNQVKVIFEFLKNGFQEISSSLDLYFEDDSVADEKIPFLAYLASILKDDSYFPYEPPAGSKRFRNLIAGFLKTYHHIPLTASNVVIFPSRNAAIENALRLFSPRLAIVDEHLTRHLPRQWLTSLALENMGSIDSLDDTITVIEAPRQSDLMIELIKKLKPQVVVTGIAIFEAVTSSAFVHLLDTTRDVGSRLFLDISDHFELSSLPGSNGVLKYLSGSPLPSHAAIICGLVKNKVYPDLEVAFVISEEESLFNALSKTVELLEGNTALISQYYYGCIFHELLAFQLACRRAPSERICENVKSVDMIGFAKSAVSVLNNAELAIDGVDNGSLIHMDVDQIFLPVPSPVKAAIFESFARQNMSESEIDVTTSIKKFVKSNYGFPTDTSTEFIYSDNSKALFNKLVLCCIKEGGTLCFPAGSNGNYVSSATFLKADIVTVPTDASVGFKFTENTLTGVLGTVKNPWVYISGPTINPTGLVYSNKEIGEILSTCARFGARVIIDTSSSGLEFDSKGWGGWDLEECLSKLNSSFKPSFSVSLLGGLSLKMLNGVLRFGFLILNQLGLVDTFYSFPGLSKPHSTVKYAAKKLLELREQESSILSDAIVEHTQILRSRSKCLKEALEKSGWDVLESCAGISVVAKPSAYLKKTIKLKISSKGEVSQGNATVEIKLDDSNIRNAILEATGLCINSGSWTGIPGYCRFNIALEENDFKKALDCILKFREVALG*