Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797360 | XP_003611496.1 | 77.070 | 314 | 39 | 3 | 1 | 288 | 1 | 307 | 3.13e-154 | 443 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797360 | sp|Q9T072|BH025_ARATH | 38.384 | 198 | 95 | 3 | 113 | 283 | 127 | 324 | 5.35e-32 | 124 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797360 | G7K128 | 77.070 | 314 | 39 | 3 | 1 | 288 | 1 | 307 | 1.50e-154 | 443 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0797360 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0647130 | Msa0797360 | 0.818621 | 1.781274e-52 | -8.615850e-47 |
| Msa0713640 | Msa0797360 | 0.870141 | 1.825976e-66 | -8.615850e-47 |
| Msa0754660 | Msa0797360 | 0.956882 | 1.029047e-114 | -8.615850e-47 |
| Msa0797360 | Msa0834880 | 0.860638 | 1.796219e-63 | -8.615850e-47 |
| Msa0797360 | Msa0891040 | 0.803307 | 3.709997e-49 | -8.615850e-47 |
| Msa0797360 | Msa0948290 | 0.808101 | 3.654015e-50 | -8.615850e-47 |
| Msa0797360 | Msa0954550 | 0.810026 | 1.414415e-50 | -8.615850e-47 |
| Msa0797360 | Msa0990350 | 0.813346 | 2.681484e-51 | -8.615850e-47 |
| Msa0797360 | Msa1082500 | 0.805820 | 1.109911e-49 | -8.615850e-47 |
| Msa0797360 | Msa1083410 | 0.808347 | 3.238178e-50 | -8.615850e-47 |
| Msa0797360 | Msa1160670 | 0.803830 | 2.890785e-49 | -8.615850e-47 |
| Msa0797360 | Msa1239310 | 0.802429 | 5.633143e-49 | -8.615850e-47 |
| Msa0797360 | Msa1423880 | 0.803489 | 3.402015e-49 | -8.615850e-47 |
| Msa0797360 | Msa1438250 | 0.808961 | 2.394414e-50 | -8.615850e-47 |
| Msa0142200 | Msa0797360 | 0.802062 | 6.704005e-49 | -8.615850e-47 |
| Msa0221060 | Msa0797360 | 0.802773 | 4.785662e-49 | -8.615850e-47 |
| Msa0227470 | Msa0797360 | 0.819536 | 1.103284e-52 | -8.615850e-47 |
| Msa0376590 | Msa0797360 | 0.808633 | 2.813340e-50 | -8.615850e-47 |
| Msa0452920 | Msa0797360 | 0.800888 | 1.166473e-48 | -8.615850e-47 |
| Msa0243890 | Msa0797360 | 0.806173 | 9.354331e-50 | -8.615850e-47 |
| Msa0266000 | Msa0797360 | -0.804081 | 2.563277e-49 | -8.615850e-47 |
| Msa0272730 | Msa0797360 | 0.800716 | 1.265106e-48 | -8.615850e-47 |
| Msa0338110 | Msa0797360 | 0.805382 | 1.371465e-49 | -8.615850e-47 |
| Msa0483650 | Msa0797360 | 0.811098 | 8.297845e-51 | -8.615850e-47 |
| Msa0572420 | Msa0797360 | 0.802268 | 6.081342e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797360 | MtrunA17_Chr5g0400621 | 61.976 | 334 | 80 | 5 | 1 | 288 | 1 | 333 | 8.95e-110 | 321 |
| Msa0797360 | MtrunA17_Chr5g0400641 | 81.395 | 129 | 18 | 1 | 141 | 263 | 1 | 129 | 3.73e-65 | 201 |
| Msa0797360 | MtrunA17_Chr2g0307131 | 35.262 | 363 | 152 | 14 | 1 | 288 | 1 | 355 | 4.59e-42 | 148 |
| Msa0797360 | MtrunA17_Chr4g0033281 | 36.499 | 337 | 153 | 15 | 1 | 288 | 1 | 325 | 3.66e-39 | 139 |
| Msa0797360 | MtrunA17_Chr6g0468491 | 35.556 | 315 | 137 | 10 | 36 | 288 | 3 | 313 | 1.65e-36 | 132 |
| Msa0797360 | MtrunA17_Chr4g0033291 | 34.603 | 315 | 146 | 11 | 25 | 288 | 23 | 328 | 8.44e-36 | 130 |
| Msa0797360 | MtrunA17_Chr4g0033391 | 33.129 | 326 | 168 | 11 | 1 | 285 | 1 | 317 | 2.10e-35 | 129 |
| Msa0797360 | MtrunA17_Chr5g0400661 | 34.589 | 292 | 157 | 6 | 6 | 263 | 2 | 293 | 4.94e-35 | 129 |
| Msa0797360 | MtrunA17_Chr4g0054621 | 33.898 | 354 | 144 | 14 | 4 | 288 | 9 | 341 | 3.78e-34 | 127 |
| Msa0797360 | MtrunA17_Chr2g0307141 | 41.758 | 182 | 80 | 2 | 133 | 288 | 178 | 359 | 1.55e-33 | 125 |
| Msa0797360 | MtrunA17_Chr7g0225901 | 38.075 | 239 | 112 | 7 | 33 | 263 | 9 | 219 | 2.12e-33 | 122 |
| Msa0797360 | MtrunA17_Chr4g0054571 | 40.000 | 230 | 96 | 6 | 76 | 263 | 59 | 288 | 2.72e-31 | 119 |
| Msa0797360 | MtrunA17_Chr4g0054581 | 40.465 | 215 | 89 | 7 | 106 | 288 | 171 | 378 | 4.51e-31 | 119 |
| Msa0797360 | MtrunA17_Chr2g0280161 | 34.821 | 224 | 113 | 5 | 86 | 282 | 131 | 348 | 9.51e-30 | 115 |
| Msa0797360 | MtrunA17_Chr6g0468461 | 36.184 | 304 | 139 | 12 | 1 | 263 | 1 | 290 | 1.37e-29 | 114 |
| Msa0797360 | MtrunA17_Chr4g0049331 | 42.857 | 154 | 74 | 4 | 127 | 268 | 120 | 271 | 1.02e-28 | 111 |
| Msa0797360 | MtrunA17_Chr4g0002801 | 37.778 | 180 | 80 | 3 | 138 | 285 | 152 | 331 | 4.97e-27 | 107 |
| Msa0797360 | MtrunA17_Chr5g0400671 | 33.484 | 221 | 131 | 6 | 65 | 276 | 82 | 295 | 1.22e-25 | 103 |
| Msa0797360 | MtrunA17_Chr4g0002781 | 36.872 | 179 | 80 | 4 | 138 | 285 | 174 | 350 | 1.36e-24 | 101 |
| Msa0797360 | MtrunA17_Chr2g0333621 | 33.929 | 224 | 111 | 6 | 96 | 284 | 90 | 311 | 2.93e-24 | 99.8 |
| Msa0797360 | MtrunA17_Chr2g0333641 | 32.719 | 217 | 110 | 5 | 96 | 279 | 89 | 302 | 9.87e-23 | 95.5 |
| Msa0797360 | MtrunA17_Chr8g0336681 | 30.233 | 258 | 130 | 5 | 72 | 286 | 87 | 337 | 1.13e-22 | 95.9 |
| Msa0797360 | MtrunA17_Chr7g0249811 | 44.737 | 114 | 60 | 1 | 137 | 250 | 164 | 274 | 1.62e-22 | 95.5 |
| Msa0797360 | MtrunA17_Chr4g0054561 | 37.158 | 183 | 79 | 7 | 133 | 287 | 153 | 327 | 5.56e-22 | 93.6 |
| Msa0797360 | MtrunA17_Chr4g0054551 | 35.393 | 178 | 84 | 6 | 137 | 287 | 154 | 327 | 6.59e-22 | 93.6 |
| Msa0797360 | MtrunA17_Chr2g0333611 | 38.806 | 134 | 72 | 3 | 137 | 263 | 44 | 174 | 6.37e-20 | 85.9 |
| Msa0797360 | MtrunA17_Chr2g0333541 | 30.797 | 276 | 148 | 7 | 35 | 282 | 6 | 266 | 8.26e-19 | 84.3 |
| Msa0797360 | MtrunA17_Chr1g0185621 | 25.389 | 193 | 123 | 4 | 105 | 283 | 449 | 634 | 3.98e-14 | 72.4 |
| Msa0797360 | MtrunA17_Chr4g0002851 | 34.028 | 144 | 61 | 4 | 161 | 283 | 65 | 195 | 5.22e-12 | 63.5 |
| Msa0797360 | MtrunA17_Chr7g0233441 | 33.333 | 144 | 70 | 4 | 161 | 283 | 57 | 195 | 5.33e-12 | 63.5 |
| Msa0797360 | MtrunA17_Chr7g0260841 | 45.455 | 66 | 35 | 1 | 138 | 203 | 355 | 419 | 6.26e-12 | 65.9 |
| Msa0797360 | MtrunA17_Chr8g0366751 | 29.747 | 158 | 89 | 3 | 138 | 276 | 462 | 616 | 2.15e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0797360 | AT4G37850.2 | 38.384 | 198 | 95 | 3 | 113 | 283 | 127 | 324 | 5.44e-33 | 124 |
| Msa0797360 | AT4G37850.1 | 38.384 | 198 | 95 | 3 | 113 | 283 | 127 | 324 | 5.44e-33 | 124 |
| Msa0797360 | AT2G22750.1 | 38.953 | 172 | 92 | 2 | 105 | 263 | 91 | 262 | 1.57e-22 | 95.1 |
| Msa0797360 | AT2G22750.2 | 38.953 | 172 | 92 | 2 | 105 | 263 | 91 | 262 | 1.59e-22 | 95.1 |
| Msa0797360 | AT2G22750.4 | 38.953 | 172 | 92 | 2 | 105 | 263 | 119 | 290 | 1.74e-22 | 95.5 |
| Msa0797360 | AT2G22750.3 | 38.953 | 172 | 92 | 2 | 105 | 263 | 119 | 290 | 1.85e-22 | 95.5 |
| Msa0797360 | AT2G22750.5 | 38.953 | 172 | 92 | 2 | 105 | 263 | 115 | 286 | 1.89e-22 | 95.5 |
| Msa0797360 | AT2G22760.2 | 40.288 | 139 | 71 | 4 | 132 | 261 | 116 | 251 | 9.28e-21 | 90.1 |
| Msa0797360 | AT2G22760.1 | 40.288 | 139 | 71 | 4 | 132 | 261 | 116 | 251 | 1.47e-20 | 89.7 |
| Msa0797360 | AT2G22770.1 | 35.811 | 148 | 74 | 2 | 137 | 263 | 131 | 278 | 2.87e-19 | 86.7 |
| Msa0797360 | AT4G09820.1 | 25.974 | 154 | 100 | 1 | 130 | 283 | 355 | 494 | 1.13e-12 | 68.2 |
| Msa0797360 | AT5G46760.1 | 33.051 | 118 | 69 | 2 | 138 | 245 | 415 | 532 | 3.93e-12 | 66.6 |
| Msa0797360 | AT4G17880.1 | 29.651 | 172 | 104 | 6 | 117 | 276 | 393 | 559 | 5.45e-12 | 66.2 |
| Msa0797360 | AT2G46510.1 | 37.975 | 79 | 48 | 1 | 116 | 193 | 372 | 450 | 9.20e-12 | 65.9 |
| Msa0797360 | AT1G32640.1 | 28.977 | 176 | 115 | 4 | 109 | 276 | 423 | 596 | 2.89e-11 | 64.3 |
| Msa0797360 | AT1G01260.1 | 28.571 | 133 | 76 | 3 | 110 | 242 | 408 | 521 | 3.58e-11 | 63.9 |
| Msa0797360 | AT1G01260.2 | 28.571 | 133 | 76 | 3 | 110 | 242 | 408 | 521 | 3.58e-11 | 63.9 |
| Msa0797360 | AT1G01260.3 | 28.571 | 133 | 76 | 3 | 110 | 242 | 408 | 521 | 3.58e-11 | 63.9 |
Find 49 sgRNAs with CRISPR-Local
Find 423 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCAAGCTTCTTGTATTT+TGG | 0.138695 | 5_3:+9480031 | Msa0797360:three_prime_UTR |
| CATAATATCAATAGTTATTA+TGG | 0.146036 | 5_3:+9472807 | Msa0797360:exon |
| TTGTCCTTTGGAAACAAATT+TGG | 0.164005 | 5_3:+9473168 | Msa0797360:CDS |
| CCACGTGGATGCCAAAATTT+TGG | 0.169781 | 5_3:+9475048 | Msa0797360:CDS |
| CTAATACTCTCAAACGTTCT+TGG | 0.224167 | 5_3:-9474904 | None:intergenic |
| ACTCTAGCTGCTCTTATTCC+TGG | 0.272370 | 5_3:+9473415 | Msa0797360:CDS |
| GAACCACACCACAAATAATT+AGG | 0.315099 | 5_3:-9479988 | None:intergenic |
| CAATTAGCTGGTTATCTGAT+TGG | 0.321783 | 5_3:+9472860 | Msa0797360:CDS |
| TGCTTAACAATTTCAGAGAT+TGG | 0.328743 | 5_3:-9472765 | None:intergenic |
| TACAAGTCATGGAGTGAATA+TGG | 0.346393 | 5_3:+9474989 | Msa0797360:CDS |
| CATAAGCTCCTAATTATTTG+TGG | 0.383716 | 5_3:+9479980 | Msa0797360:three_prime_UTR |
| ATGGAGTGAATATGGTTCTA+AGG | 0.389690 | 5_3:+9474997 | Msa0797360:CDS |
| AAGTTATTATTCTTGTCCTT+TGG | 0.396571 | 5_3:+9473156 | Msa0797360:CDS |
| TATTTATTGCAGAAAGAAAC+AGG | 0.398821 | 5_3:+9479764 | Msa0797360:intron |
| TTAAAGAAAGGAAGATGAAA+TGG | 0.411223 | 5_3:-9480145 | None:intergenic |
| AATTAGCTGGTTATCTGATT+GGG | 0.417900 | 5_3:+9472861 | Msa0797360:CDS |
| CTCTGAAATTGTTAAGCAAA+AGG | 0.444951 | 5_3:+9472770 | Msa0797360:five_prime_UTR |
| ATTTGAAGAAAATGAAATAG+AGG | 0.453578 | 5_3:+9473009 | Msa0797360:CDS |
| CGCAGCTAAGTTACAAGTCA+TGG | 0.456135 | 5_3:+9474978 | Msa0797360:CDS |
| CTTTCCAAATTTGTTTCCAA+AGG | 0.463702 | 5_3:-9473172 | None:intergenic |
| CAAACGCATCATCAATTAGC+TGG | 0.468053 | 5_3:+9472848 | Msa0797360:CDS |
| AACAAATACATCCCAAATCA+AGG | 0.480151 | 5_3:-9480090 | None:intergenic |
| GTGGTGTTTGAGTATCAGAT+TGG | 0.490552 | 5_3:+9479935 | Msa0797360:three_prime_UTR |
| CAATGCGAACAAAACTTGTA+TGG | 0.490627 | 5_3:+9473049 | Msa0797360:CDS |
| TCTTTCTCTCCGCCATGATA+CGG | 0.492627 | 5_3:-9473363 | None:intergenic |
| TCTTATTCCTGGCTTGAAGA+AGG | 0.494711 | 5_3:+9473426 | Msa0797360:CDS |
| AGTATTATTATTTCATCGAC+CGG | 0.498715 | 5_3:-9479868 | None:intergenic |
| CAAGAATAATAACTTTCAAA+AGG | 0.505322 | 5_3:-9473148 | None:intergenic |
| ACGGACAAGACTTCAGTCAT+AGG | 0.509641 | 5_3:+9474854 | Msa0797360:CDS |
| CAACTACCTCAAAATCAAGA+AGG | 0.526009 | 5_3:+9473256 | Msa0797360:CDS |
| CAACATACCTTCTTCAAGCC+AGG | 0.529759 | 5_3:-9473433 | None:intergenic |
| CACAAAGACAAGAGACTAAG+AGG | 0.531183 | 5_3:+9473317 | Msa0797360:CDS |
| AAATAAAATATATTAAAGAA+AGG | 0.536678 | 5_3:-9480157 | None:intergenic |
| GGTAGTTGTGTTTGTGACAA+TGG | 0.540621 | 5_3:-9473241 | None:intergenic |
| TGGTGTTTGAGTATCAGATT+GGG | 0.541526 | 5_3:+9479936 | Msa0797360:three_prime_UTR |
| TGATCATCAAGACCGTATCA+TGG | 0.542668 | 5_3:+9473351 | Msa0797360:CDS |
| GCTCCTAATTATTTGTGGTG+TGG | 0.551267 | 5_3:+9479985 | Msa0797360:three_prime_UTR |
| ATAATAATACTAAGATGTCA+TGG | 0.553313 | 5_3:+9479880 | Msa0797360:three_prime_UTR |
| TAACTTTCAAAAGGTAACAA+TGG | 0.569159 | 5_3:-9473139 | None:intergenic |
| TTTGAAGAAAATGAAATAGA+GGG | 0.571396 | 5_3:+9473010 | Msa0797360:CDS |
| CGTAACATGAACATGTAGTC+CGG | 0.586244 | 5_3:+9479849 | Msa0797360:exon |
| AACTACCTCAAAATCAAGAA+GGG | 0.608663 | 5_3:+9473257 | Msa0797360:CDS |
| TGGAACAACTTCATGCAAAG+TGG | 0.630460 | 5_3:-9473221 | None:intergenic |
| TGCTATTAACAACAAAGAGA+TGG | 0.631015 | 5_3:-9475150 | None:intergenic |
| TACATGTTCATGTTACGACA+TGG | 0.637585 | 5_3:-9479843 | None:intergenic |
| CACTGCTATCTATGCCAATG+AGG | 0.645769 | 5_3:-9479915 | None:intergenic |
| CTCATTGGCATAGATAGCAG+TGG | 0.655973 | 5_3:+9479916 | Msa0797360:three_prime_UTR |
| TAATGAAGATCTCCTCCACG+TGG | 0.724761 | 5_3:+9475033 | Msa0797360:CDS |
| TCATCAAGACCGTATCATGG+CGG | 0.756942 | 5_3:+9473354 | Msa0797360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+GGG | - | chr5_3:9476528-9476547 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr5_3:9476528-9476547 | Msa0797360:intron | 0.0% |
| !! | TTATAAAATATATATATATA+GGG | - | chr5_3:9476737-9476756 | None:intergenic | 0.0% |
| !! | ATTATAAAATATATATATAT+AGG | - | chr5_3:9476738-9476757 | None:intergenic | 0.0% |
| !! | AACTATATAAATTTAATCTA+AGG | - | chr5_3:9473870-9473889 | None:intergenic | 10.0% |
| !! | AATTTATATAGTTATTTAAC+CGG | + | chr5_3:9473877-9473896 | Msa0797360:intron | 10.0% |
| !!! | TTATTAATTTTTGCATTTTT+GGG | + | chr5_3:9474454-9474473 | Msa0797360:intron | 10.0% |
| !!! | AGAAATAATTTTAATATGTT+TGG | + | chr5_3:9474500-9474519 | Msa0797360:intron | 10.0% |
| !! | TAAAGTCTATTTAATTAAAT+AGG | - | chr5_3:9477254-9477273 | None:intergenic | 10.0% |
| !!! | TATTTTGAAACAATTTTTTT+TGG | + | chr5_3:9477739-9477758 | Msa0797360:intron | 10.0% |
| !!! | TTTTTTCTCAAATAATTAAA+GGG | - | chr5_3:9479725-9479744 | None:intergenic | 10.0% |
| !! | CATAATATCAATAGTTATTA+TGG | + | chr5_3:9472807-9472826 | Msa0797360:exon | 15.0% |
| !!! | AGTTTTTATCTTATTTTACA+GGG | - | chr5_3:9473966-9473985 | None:intergenic | 15.0% |
| !!! | TAGTTTTTATCTTATTTTAC+AGG | - | chr5_3:9473967-9473986 | None:intergenic | 15.0% |
| !! | AAAAAATAAAAGCAAAAAAC+CGG | + | chr5_3:9474281-9474300 | Msa0797360:intron | 15.0% |
| !! | AAATGCAAAAATTAATAACT+CGG | - | chr5_3:9474452-9474471 | None:intergenic | 15.0% |
| !!! | GTTATTAATTTTTGCATTTT+TGG | + | chr5_3:9474453-9474472 | Msa0797360:intron | 15.0% |
| !! | ACCATTTGATTAAAAATAAA+TGG | + | chr5_3:9475330-9475349 | Msa0797360:intron | 15.0% |
| !!! | ACCATTTATTTTTAATCAAA+TGG | - | chr5_3:9475334-9475353 | None:intergenic | 15.0% |
| !!! | TTATATTTAACCTCTTATTT+TGG | - | chr5_3:9475689-9475708 | None:intergenic | 15.0% |
| !! | TTATGAAATTTGATAGAATA+AGG | + | chr5_3:9476201-9476220 | Msa0797360:intron | 15.0% |
| !!! | TGTAAAATAGGTTTTTAAAT+AGG | - | chr5_3:9476957-9476976 | None:intergenic | 15.0% |
| !! | AAGATTGCATTAATAAAATT+TGG | - | chr5_3:9477020-9477039 | None:intergenic | 15.0% |
| !! | TTATTTAATAACACGTATAT+TGG | - | chr5_3:9477097-9477116 | None:intergenic | 15.0% |
| !! | AAGAAAAATTATTATTGCAT+TGG | + | chr5_3:9477699-9477718 | Msa0797360:intron | 15.0% |
| !! | AAAGGAATTAAGAAAATTAA+TGG | - | chr5_3:9478611-9478630 | None:intergenic | 15.0% |
| !! | AAAAAAACATCATAAAAAAG+TGG | - | chr5_3:9478777-9478796 | None:intergenic | 15.0% |
| !! | TAAAATAGATGTAATTGTAT+TGG | - | chr5_3:9478824-9478843 | None:intergenic | 15.0% |
| !!! | AATTACATCTATTTTATATG+TGG | + | chr5_3:9478828-9478847 | Msa0797360:intron | 15.0% |
| !!! | ATTACATCTATTTTATATGT+GGG | + | chr5_3:9478829-9478848 | Msa0797360:intron | 15.0% |
| !! | TTTCAAACCAATATAAAAAT+TGG | - | chr5_3:9479678-9479697 | None:intergenic | 15.0% |
| !!! | GTTTTTTCTCAAATAATTAA+AGG | - | chr5_3:9479726-9479745 | None:intergenic | 15.0% |
| !!! | TTTTTCTATAGATGCTATAT+TGG | + | chr5_3:9472738-9472757 | Msa0797360:five_prime_UTR | 20.0% |
| !!! | TTGTATGAATGATTTTTATG+CGG | + | chr5_3:9472956-9472975 | Msa0797360:intron | 20.0% |
| !! | ATTTGAAGAAAATGAAATAG+AGG | + | chr5_3:9473009-9473028 | Msa0797360:CDS | 20.0% |
| !! | TTTGAAGAAAATGAAATAGA+GGG | + | chr5_3:9473010-9473029 | Msa0797360:CDS | 20.0% |
| !! | CAAGAATAATAACTTTCAAA+AGG | - | chr5_3:9473151-9473170 | None:intergenic | 20.0% |
| !! | TAAAAAACAATCTAGAAGTT+GGG | + | chr5_3:9473572-9473591 | Msa0797360:intron | 20.0% |
| !!! | TTATTTAAGATAGATCGATT+TGG | + | chr5_3:9473640-9473659 | Msa0797360:intron | 20.0% |
| !! | AACTATGTATATTGTGATAA+TGG | - | chr5_3:9473716-9473735 | None:intergenic | 20.0% |
| !!! | GTTTTTATCTTATTTTACAG+GGG | - | chr5_3:9473965-9473984 | None:intergenic | 20.0% |
| !! | TCCAACAATAATAATTTCAT+AGG | + | chr5_3:9473987-9474006 | Msa0797360:intron | 20.0% |
| !!! | AATTGGAATCATACTTTTTT+GGG | - | chr5_3:9474081-9474100 | None:intergenic | 20.0% |
| !!! | TTTTTGGATTTTTATAACTG+GGG | - | chr5_3:9474133-9474152 | None:intergenic | 20.0% |
| !!! | CTTTTTGGATTTTTATAACT+GGG | - | chr5_3:9474134-9474153 | None:intergenic | 20.0% |
| !!! | TCTTTTTGGATTTTTATAAC+TGG | - | chr5_3:9474135-9474154 | None:intergenic | 20.0% |
| !! | ATCAATAACATTTAATTCCA+AGG | + | chr5_3:9474190-9474209 | Msa0797360:intron | 20.0% |
| !! | AAAATGCAATAGTTAATATG+TGG | - | chr5_3:9474634-9474653 | None:intergenic | 20.0% |
| !!! | ACTAGTTAGCTATTAATTTT+AGG | + | chr5_3:9474781-9474800 | Msa0797360:intron | 20.0% |
| !!! | GAGTTTTTTGCTTAATAAAT+TGG | + | chr5_3:9475111-9475130 | Msa0797360:CDS | 20.0% |
| !!! | TCATGAATTTTTGAAATTGT+TGG | - | chr5_3:9475556-9475575 | None:intergenic | 20.0% |
| !! | ATTTCTTCAATAAGAACATT+AGG | - | chr5_3:9475740-9475759 | None:intergenic | 20.0% |
| !!! | GTTCATATATTTTGCAATAT+TGG | - | chr5_3:9475942-9475961 | None:intergenic | 20.0% |
| !!! | ACCATATATTTTTGATCTAA+TGG | + | chr5_3:9476253-9476272 | Msa0797360:intron | 20.0% |
| !! | ACCATTAGATCAAAAATATA+TGG | - | chr5_3:9476257-9476276 | None:intergenic | 20.0% |
| !!! | TATAATTTTTGAAGTATGTC+AGG | - | chr5_3:9476850-9476869 | None:intergenic | 20.0% |
| !! | TGACATACTTCAAAAATTAT+AGG | + | chr5_3:9476849-9476868 | Msa0797360:intron | 20.0% |
| !!! | TAAAAACCTATTTTACACTA+AGG | + | chr5_3:9476960-9476979 | Msa0797360:intron | 20.0% |
| !! | ATATTTAGTAGTAGGTTTAT+AGG | - | chr5_3:9476996-9477015 | None:intergenic | 20.0% |
| !! | TTATATATAAAACGCTGAAT+AGG | + | chr5_3:9477182-9477201 | Msa0797360:intron | 20.0% |
| !! | ATTGTCCTTAATAAATGTTA+TGG | + | chr5_3:9477441-9477460 | Msa0797360:intron | 20.0% |
| !! | CTTTACCATAACATTTATTA+AGG | - | chr5_3:9477449-9477468 | None:intergenic | 20.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | + | chr5_3:9477603-9477622 | Msa0797360:intron | 20.0% |
| !!! | TGTATATAGTATTGATTGAA+GGG | + | chr5_3:9477666-9477685 | Msa0797360:intron | 20.0% |
| !! | TAATGTTTCATTTGTATTGT+AGG | + | chr5_3:9477829-9477848 | Msa0797360:intron | 20.0% |
| !! | AATTGTCCTTAATAATGTTA+TGG | + | chr5_3:9477940-9477959 | Msa0797360:intron | 20.0% |
| !! | TCTTTACCATAACATTATTA+AGG | - | chr5_3:9477949-9477968 | None:intergenic | 20.0% |
| !! | GAGAGAATAATAAATAGTTA+AGG | + | chr5_3:9477990-9478009 | Msa0797360:intron | 20.0% |
| !! | TCTATACAACTTAGAAAATT+TGG | - | chr5_3:9478174-9478193 | None:intergenic | 20.0% |
| !!! | TTTTCTCAATATATCTAGAA+TGG | + | chr5_3:9478582-9478601 | Msa0797360:intron | 20.0% |
| !!! | TTTCTCAATATATCTAGAAT+GGG | + | chr5_3:9478583-9478602 | Msa0797360:intron | 20.0% |
| !!! | AGTTTTACAAAACAAACAAT+GGG | - | chr5_3:9478722-9478741 | None:intergenic | 20.0% |
| !!! | AAGTTTTACAAAACAAACAA+TGG | - | chr5_3:9478723-9478742 | None:intergenic | 20.0% |
| !!! | ATTGTTTGTTTTGTAAAACT+TGG | + | chr5_3:9478722-9478741 | Msa0797360:intron | 20.0% |
| !!! | TTGTTTTTCTCATTTCTTAT+TGG | - | chr5_3:9479133-9479152 | None:intergenic | 20.0% |
| !! | AATAAGAAATGAGAAAAACA+AGG | + | chr5_3:9479132-9479151 | Msa0797360:intron | 20.0% |
| !!! | GCATTACTAAATTTTAATTG+TGG | - | chr5_3:9479223-9479242 | None:intergenic | 20.0% |
| !!! | AACTTTGAAAATTTACAGAA+AGG | - | chr5_3:9479333-9479352 | None:intergenic | 20.0% |
| !!! | CCTTTTTCTTTTCTAATTAA+CGG | - | chr5_3:9479547-9479566 | None:intergenic | 20.0% |
| !!! | TTCAGTACCAATTTTTATAT+TGG | + | chr5_3:9479668-9479687 | Msa0797360:intron | 20.0% |
| !!! | TTGGTTTGAAAAATGAATTA+AGG | + | chr5_3:9479687-9479706 | Msa0797360:intron | 20.0% |
| !! | TTATTTGAGAAAAAACTTAC+AGG | + | chr5_3:9479730-9479749 | Msa0797360:intron | 20.0% |
| !! | ATAATAATACTAAGATGTCA+TGG | + | chr5_3:9479880-9479899 | Msa0797360:three_prime_UTR | 20.0% |
| !!! | GATGTATTTGTTATAGTTTT+TGG | + | chr5_3:9480101-9480120 | Msa0797360:three_prime_UTR | 20.0% |
| ! | TAACTTTCAAAAGGTAACAA+TGG | - | chr5_3:9473142-9473161 | None:intergenic | 25.0% |
| ! | AAGTTATTATTCTTGTCCTT+TGG | + | chr5_3:9473156-9473175 | Msa0797360:CDS | 25.0% |
| ! | CTAAAAAACAATCTAGAAGT+TGG | + | chr5_3:9473571-9473590 | Msa0797360:intron | 25.0% |
| !! | TTATTCTAACCTTTTAGACA+TGG | + | chr5_3:9473670-9473689 | Msa0797360:intron | 25.0% |
| !! | TATTCTAACCTTTTAGACAT+GGG | + | chr5_3:9473671-9473690 | Msa0797360:intron | 25.0% |
| !! | ATATACATAGTTTTCAGACT+CGG | + | chr5_3:9473724-9473743 | Msa0797360:intron | 25.0% |
| ! | GCCTATGAAATTATTATTGT+TGG | - | chr5_3:9473991-9474010 | None:intergenic | 25.0% |
| ! | TCATAACTCAAAATACATCT+TGG | + | chr5_3:9474035-9474054 | Msa0797360:intron | 25.0% |
| !!! | ATACTTTTTTGGGATCTATT+TGG | - | chr5_3:9474071-9474090 | None:intergenic | 25.0% |
| !!! | GAATTGGAATCATACTTTTT+TGG | - | chr5_3:9474082-9474101 | None:intergenic | 25.0% |
| ! | ACTTGAATTTATGTTGGAAT+TGG | - | chr5_3:9474098-9474117 | None:intergenic | 25.0% |
| ! | TGTTGGAATTATACTTTGTT+GGG | - | chr5_3:9474159-9474178 | None:intergenic | 25.0% |
| !! | ATTGATGATAATACTTGTGT+TGG | - | chr5_3:9474176-9474195 | None:intergenic | 25.0% |
| ! | CTCCATCTATTTCAAATATT+TGG | + | chr5_3:9474720-9474739 | Msa0797360:intron | 25.0% |
| ! | TTGTAAATCAAATCAACAGA+CGG | + | chr5_3:9474835-9474854 | Msa0797360:intron | 25.0% |
| ! | AGATACATGTGTTTCTTAAA+TGG | - | chr5_3:9475372-9475391 | None:intergenic | 25.0% |
| ! | GTTTATGAGAAACAATCTAA+TGG | - | chr5_3:9475399-9475418 | None:intergenic | 25.0% |
| ! | AGAAGATGAAACGTTAAAAT+GGG | - | chr5_3:9475421-9475440 | None:intergenic | 25.0% |
| ! | AAGAAGATGAAACGTTAAAA+TGG | - | chr5_3:9475422-9475441 | None:intergenic | 25.0% |
| !! | GGATGAAGTTATAAGTTTTT+GGG | - | chr5_3:9475535-9475554 | None:intergenic | 25.0% |
| !! | TGGATGAAGTTATAAGTTTT+TGG | - | chr5_3:9475536-9475555 | None:intergenic | 25.0% |
| ! | ATTTGAGAATTTGATGTTCT+TGG | - | chr5_3:9475616-9475635 | None:intergenic | 25.0% |
| ! | ATAAAGCAAAATCAATACGT+TGG | + | chr5_3:9475843-9475862 | Msa0797360:intron | 25.0% |
| !! | TTAATTGAATTGTGTTGCTA+TGG | + | chr5_3:9476121-9476140 | Msa0797360:intron | 25.0% |
| !! | TAATTGAATTGTGTTGCTAT+GGG | + | chr5_3:9476122-9476141 | Msa0797360:intron | 25.0% |
| ! | AAATTTGATAGAATAAGGTG+AGG | + | chr5_3:9476206-9476225 | Msa0797360:intron | 25.0% |
| ! | ATGGTTAACTTATATGAGAA+TGG | - | chr5_3:9476295-9476314 | None:intergenic | 25.0% |
| ! | ATAGTATACATCCTCATATA+GGG | + | chr5_3:9476319-9476338 | Msa0797360:intron | 25.0% |
| ! | ATAAAAGACACCTTCATAAA+AGG | + | chr5_3:9476487-9476506 | Msa0797360:intron | 25.0% |
| ! | ATAAAAGACATCTTCACAAA+AGG | + | chr5_3:9476696-9476715 | Msa0797360:intron | 25.0% |
| ! | AGGAAATTAGGGAAAAAAAT+GGG | + | chr5_3:9476793-9476812 | Msa0797360:intron | 25.0% |
| ! | AATTTGGCATATTTAGTAGT+AGG | - | chr5_3:9477004-9477023 | None:intergenic | 25.0% |
| ! | ACTTGATTCTTCATATGATT+TGG | - | chr5_3:9477120-9477139 | None:intergenic | 25.0% |
| ! | TAATTAAATAGGTCAAGCTA+AGG | - | chr5_3:9477243-9477262 | None:intergenic | 25.0% |
| !!! | ACATGTAATTGGTTTTGTAT+AGG | + | chr5_3:9477385-9477404 | Msa0797360:intron | 25.0% |
| ! | AAACGACATTCAATTTGAAA+CGG | - | chr5_3:9477516-9477535 | None:intergenic | 25.0% |
| !! | TTCAAATTGAATGTCGTTTA+AGG | + | chr5_3:9477517-9477536 | Msa0797360:intron | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | - | chr5_3:9477613-9477632 | None:intergenic | 25.0% |
| !!! | GTGTATATAGTATTGATTGA+AGG | + | chr5_3:9477665-9477684 | Msa0797360:intron | 25.0% |
| ! | AAACGACATATAATTTGAGA+CGG | + | chr5_3:9478097-9478116 | Msa0797360:intron | 25.0% |
| ! | AAGTTGTATAGAAATACCTT+AGG | + | chr5_3:9478182-9478201 | Msa0797360:intron | 25.0% |
| !! | TTGAGAGTTAAAACCTTTTA+AGG | + | chr5_3:9478212-9478231 | Msa0797360:intron | 25.0% |
| !! | TGAGAGTTAAAACCTTTTAA+GGG | + | chr5_3:9478213-9478232 | Msa0797360:intron | 25.0% |
| !! | ATTTTCTTAATTCCTTTCTC+TGG | + | chr5_3:9478614-9478633 | Msa0797360:intron | 25.0% |
| !! | TTTTCTTAATTCCTTTCTCT+GGG | + | chr5_3:9478615-9478634 | Msa0797360:intron | 25.0% |
| !! | GTTTTACAAAACAAACAATG+GGG | - | chr5_3:9478721-9478740 | None:intergenic | 25.0% |
| ! | AAAACAATGAAGAGAGAAAA+AGG | - | chr5_3:9479107-9479126 | None:intergenic | 25.0% |
| ! | TCAACAAAGTTGTCATTAAA+TGG | + | chr5_3:9479158-9479177 | Msa0797360:intron | 25.0% |
| !!! | ATTAAGTTTTTCAACTGTCT+TGG | - | chr5_3:9479303-9479322 | None:intergenic | 25.0% |
| ! | TTTCTAATTAACGGTACTTA+GGG | - | chr5_3:9479538-9479557 | None:intergenic | 25.0% |
| !! | TTTTCTAATTAACGGTACTT+AGG | - | chr5_3:9479539-9479558 | None:intergenic | 25.0% |
| ! | CCGTTAATTAGAAAAGAAAA+AGG | + | chr5_3:9479544-9479563 | Msa0797360:intron | 25.0% |
| ! | TCTGCAATAAATAAATAGTG+TGG | - | chr5_3:9479757-9479776 | None:intergenic | 25.0% |
| ! | TATTTATTGCAGAAAGAAAC+AGG | + | chr5_3:9479764-9479783 | Msa0797360:intron | 25.0% |
| !! | GCTTTTTACAAGATCATTTT+CGG | - | chr5_3:9479801-9479820 | None:intergenic | 25.0% |
| ! | AGTATTATTATTTCATCGAC+CGG | - | chr5_3:9479871-9479890 | None:intergenic | 25.0% |
| ! | TTAAAGAAAGGAAGATGAAA+TGG | - | chr5_3:9480148-9480167 | None:intergenic | 25.0% |
| TGCTTAACAATTTCAGAGAT+TGG | - | chr5_3:9472768-9472787 | None:intergenic | 30.0% | |
| !! | CTCTGAAATTGTTAAGCAAA+AGG | + | chr5_3:9472770-9472789 | Msa0797360:five_prime_UTR | 30.0% |
| AATTAGCTGGTTATCTGATT+GGG | + | chr5_3:9472861-9472880 | Msa0797360:CDS | 30.0% | |
| !! | AGCAAGTATTTTTCAACAAG+AGG | + | chr5_3:9473099-9473118 | Msa0797360:CDS | 30.0% |
| ! | TTGTCCTTTGGAAACAAATT+TGG | + | chr5_3:9473168-9473187 | Msa0797360:CDS | 30.0% |
| ! | CTTTCCAAATTTGTTTCCAA+AGG | - | chr5_3:9473175-9473194 | None:intergenic | 30.0% |
| AACTACCTCAAAATCAAGAA+GGG | + | chr5_3:9473257-9473276 | Msa0797360:CDS | 30.0% | |
| !!! | TTAGAGCTACGTGTTTTTTT+GGG | - | chr5_3:9473555-9473574 | None:intergenic | 30.0% |
| !!! | TTTAGAGCTACGTGTTTTTT+TGG | - | chr5_3:9473556-9473575 | None:intergenic | 30.0% |
| !! | TATTGTGATAATGGTCCAAA+CGG | - | chr5_3:9473707-9473726 | None:intergenic | 30.0% |
| GTTATTTAACCGGATTAACT+CGG | + | chr5_3:9473887-9473906 | Msa0797360:intron | 30.0% | |
| CTGCTTACTTGAATTTATGT+TGG | - | chr5_3:9474104-9474123 | None:intergenic | 30.0% | |
| ! | ATACTTTGTTGGGATCTTTT+TGG | - | chr5_3:9474149-9474168 | None:intergenic | 30.0% |
| GTGTTGGAATTATACTTTGT+TGG | - | chr5_3:9474160-9474179 | None:intergenic | 30.0% | |
| CAAAAATTAATAACTCGGCT+CGG | - | chr5_3:9474447-9474466 | None:intergenic | 30.0% | |
| !!! | TTTTGGGACCAAACTTTATT+CGG | + | chr5_3:9474470-9474489 | Msa0797360:intron | 30.0% |
| TACACATACCGAATAAAGTT+TGG | - | chr5_3:9474481-9474500 | None:intergenic | 30.0% | |
| TGTAGTGATGAGAATTCATT+TGG | - | chr5_3:9474686-9474705 | None:intergenic | 30.0% | |
| ! | CGCCAAATATTTGAAATAGA+TGG | - | chr5_3:9474725-9474744 | None:intergenic | 30.0% |
| ! | CACGTTTTTGTCCAAAATTT+TGG | - | chr5_3:9475062-9475081 | None:intergenic | 30.0% |
| ! | GCAAAAAACTCTTTTGCTTT+TGG | - | chr5_3:9475102-9475121 | None:intergenic | 30.0% |
| TGCTATTAACAACAAAGAGA+TGG | - | chr5_3:9475153-9475172 | None:intergenic | 30.0% | |
| TTGACATAACAATCATTGCT+CGG | + | chr5_3:9475200-9475219 | Msa0797360:intron | 30.0% | |
| ATGCCTTCTTTATATGAGAA+TGG | + | chr5_3:9475292-9475311 | Msa0797360:intron | 30.0% | |
| TCACCATTCTCATATAAAGA+AGG | - | chr5_3:9475298-9475317 | None:intergenic | 30.0% | |
| TGAAATTTGACGTTAATGGT+GGG | - | chr5_3:9475485-9475504 | None:intergenic | 30.0% | |
| ATGAAATTTGACGTTAATGG+TGG | - | chr5_3:9475486-9475505 | None:intergenic | 30.0% | |
| ACCATTAACGTCAAATTTCA+TGG | + | chr5_3:9475485-9475504 | Msa0797360:intron | 30.0% | |
| !!! | AAGTTTTTGGGTGAATTTTC+TGG | - | chr5_3:9475523-9475542 | None:intergenic | 30.0% |
| TTTGATGTTCTTGGAGTTTA+AGG | - | chr5_3:9475607-9475626 | None:intergenic | 30.0% | |
| AAGAGATCTTCCAAAATAAG+AGG | + | chr5_3:9475676-9475695 | Msa0797360:intron | 30.0% | |
| CATAGTATACATCCTCATAT+AGG | + | chr5_3:9476318-9476337 | Msa0797360:intron | 30.0% | |
| TTGTAACAAAACCCTATATG+AGG | - | chr5_3:9476333-9476352 | None:intergenic | 30.0% | |
| ! | TTTTAACAAGTCACACCTTA+AGG | + | chr5_3:9476372-9476391 | Msa0797360:intron | 30.0% |
| AAAGTGAAAATCACACCTTA+AGG | - | chr5_3:9476390-9476409 | None:intergenic | 30.0% | |
| ACACCTTCATAAAAGTAAGT+TGG | + | chr5_3:9476432-9476451 | Msa0797360:intron | 30.0% | |
| !! | ACACCAACTTACTTTTATGA+AGG | - | chr5_3:9476438-9476457 | None:intergenic | 30.0% |
| ! | TTTTATCAAGCAACACCTTA+AGG | + | chr5_3:9476581-9476600 | Msa0797360:intron | 30.0% |
| AAAGTGAAAATCACACCTTA+AGG | - | chr5_3:9476390-9476409 | None:intergenic | 30.0% | |
| ACACCTTCATAAAAGTAAGT+TGG | + | chr5_3:9476432-9476451 | Msa0797360:intron | 30.0% | |
| !! | ACACCAACTTACTTTTATGA+AGG | - | chr5_3:9476438-9476457 | None:intergenic | 30.0% |
| TGTTCGTTGTAGTAAATTGT+TGG | + | chr5_3:9476762-9476781 | Msa0797360:intron | 30.0% | |
| GAGGAAATTAGGGAAAAAAA+TGG | + | chr5_3:9476792-9476811 | Msa0797360:intron | 30.0% | |
| !!! | TTTTGAAGTATGTCAGGTTT+AGG | - | chr5_3:9476844-9476863 | None:intergenic | 30.0% |
| ! | ACTTCATCATGCCTTTAAAA+AGG | - | chr5_3:9476927-9476946 | None:intergenic | 30.0% |
| !! | AGTTAGGCTTTAAATAGGTT+AGG | + | chr5_3:9477316-9477335 | Msa0797360:intron | 30.0% |
| ! | ATTACATTTCCTCTAGAGAT+GGG | - | chr5_3:9477879-9477898 | None:intergenic | 30.0% |
| ! | AATTACATTTCCTCTAGAGA+TGG | - | chr5_3:9477880-9477899 | None:intergenic | 30.0% |
| !! | GTCTTAAAGGTTAGTCTATT+GGG | + | chr5_3:9478146-9478165 | Msa0797360:intron | 30.0% |
| !! | TCTTAAAGGTTAGTCTATTG+GGG | + | chr5_3:9478147-9478166 | Msa0797360:intron | 30.0% |
| ! | ATAGAAATACCTTAGGTTGT+CGG | + | chr5_3:9478189-9478208 | Msa0797360:intron | 30.0% |
| !! | AGTTAAAACCTTTTAAGGGT+TGG | + | chr5_3:9478217-9478236 | Msa0797360:intron | 30.0% |
| !! | AAACTATATTCGAGTTGGTT+CGG | - | chr5_3:9478250-9478269 | None:intergenic | 30.0% |
| ! | CTATTTTATATGTGGGAAGA+TGG | + | chr5_3:9478836-9478855 | Msa0797360:intron | 30.0% |
| TACTACCAAATTGAATCAGA+AGG | + | chr5_3:9478860-9478879 | Msa0797360:intron | 30.0% | |
| TTCTTCCTTCTGATTCAATT+TGG | - | chr5_3:9478868-9478887 | None:intergenic | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | + | chr5_3:9479035-9479054 | Msa0797360:intron | 30.0% |
| !! | TTTTTCAACTGTCTTGGAAA+TGG | - | chr5_3:9479297-9479316 | None:intergenic | 30.0% |
| CATAAGCTCCTAATTATTTG+TGG | + | chr5_3:9479980-9479999 | Msa0797360:three_prime_UTR | 30.0% | |
| ! | CATTCAAGCTTCTTGTATTT+TGG | + | chr5_3:9480031-9480050 | Msa0797360:three_prime_UTR | 30.0% |
| !!! | TCTTTGTTTTGTCCTTGATT+TGG | + | chr5_3:9480078-9480097 | Msa0797360:three_prime_UTR | 30.0% |
| !!! | CTTTGTTTTGTCCTTGATTT+GGG | + | chr5_3:9480079-9480098 | Msa0797360:three_prime_UTR | 30.0% |
| AACAAATACATCCCAAATCA+AGG | - | chr5_3:9480093-9480112 | None:intergenic | 30.0% | |
| CAATTAGCTGGTTATCTGAT+TGG | + | chr5_3:9472860-9472879 | Msa0797360:CDS | 35.0% | |
| GTCACTTGACTGATATATGA+AGG | - | chr5_3:9472899-9472918 | None:intergenic | 35.0% | |
| CAATGCGAACAAAACTTGTA+TGG | + | chr5_3:9473049-9473068 | Msa0797360:CDS | 35.0% | |
| CAACTACCTCAAAATCAAGA+AGG | + | chr5_3:9473256-9473275 | Msa0797360:CDS | 35.0% | |
| ! | AATGACCCTTCTTGATTTTG+AGG | - | chr5_3:9473265-9473284 | None:intergenic | 35.0% |
| AGATCTCATTGTCTCATTCA+TGG | + | chr5_3:9473461-9473480 | Msa0797360:intron | 35.0% | |
| TCTCATTCATGGATTCTTCA+AGG | + | chr5_3:9473472-9473491 | Msa0797360:intron | 35.0% | |
| TGATGAGAATTCATTTGGAG+TGG | - | chr5_3:9474681-9474700 | None:intergenic | 35.0% | |
| CTAATACTCTCAAACGTTCT+TGG | - | chr5_3:9474907-9474926 | None:intergenic | 35.0% | |
| TACAAGTCATGGAGTGAATA+TGG | + | chr5_3:9474989-9475008 | Msa0797360:CDS | 35.0% | |
| ! | ATGGAGTGAATATGGTTCTA+AGG | + | chr5_3:9474997-9475016 | Msa0797360:CDS | 35.0% |
| GAGCAATGATTGTTATGTCA+AGG | - | chr5_3:9475201-9475220 | None:intergenic | 35.0% | |
| TGACATAACAATCATTGCTC+GGG | + | chr5_3:9475201-9475220 | Msa0797360:intron | 35.0% | |
| GCCATGAAATTTGACGTTAA+TGG | - | chr5_3:9475489-9475508 | None:intergenic | 35.0% | |
| ! | TGTTCTTGGAGTTTAAGGTT+AGG | - | chr5_3:9475602-9475621 | None:intergenic | 35.0% |
| TCTACCAACATTACTGTCAA+CGG | + | chr5_3:9475908-9475927 | Msa0797360:intron | 35.0% | |
| AGTTGAAATGTACTGAGAGA+TGG | + | chr5_3:9476153-9476172 | Msa0797360:intron | 35.0% | |
| GAGGATGTATACTATGAGAA+TGG | - | chr5_3:9476314-9476333 | None:intergenic | 35.0% | |
| TGTTAAAAGACACCACCAAA+GGG | - | chr5_3:9476360-9476379 | None:intergenic | 35.0% | |
| TTGTTAAAAGACACCACCAA+AGG | - | chr5_3:9476361-9476380 | None:intergenic | 35.0% | |
| ! | ATAGACGACACCTTTTATGA+AGG | - | chr5_3:9476500-9476519 | None:intergenic | 35.0% |
| ! | TTTTGTTACAAGACACCCTT+TGG | + | chr5_3:9476551-9476570 | Msa0797360:intron | 35.0% |
| TGATAAAAGACACCACCAAA+GGG | - | chr5_3:9476569-9476588 | None:intergenic | 35.0% | |
| TTGATAAAAGACACCACCAA+AGG | - | chr5_3:9476570-9476589 | None:intergenic | 35.0% | |
| GTTGTAGTAAATTGTTGGAG+TGG | + | chr5_3:9476767-9476786 | Msa0797360:intron | 35.0% | |
| GCTAGACCTTAGTGTAAAAT+AGG | - | chr5_3:9476969-9476988 | None:intergenic | 35.0% | |
| AAAAGCCTATTAAGCACATC+AGG | - | chr5_3:9477212-9477231 | None:intergenic | 35.0% | |
| CTTTAAATAGGTTAGGTGTC+AGG | + | chr5_3:9477323-9477342 | Msa0797360:intron | 35.0% | |
| ACAGAGGGAGTAAATACTTA+AGG | + | chr5_3:9477784-9477803 | Msa0797360:intron | 35.0% | |
| ! | GACATATAATTTGAGACGGA+GGG | + | chr5_3:9478101-9478120 | Msa0797360:intron | 35.0% |
| AGGAAAACAGATGTATGCTA+AGG | + | chr5_3:9478124-9478143 | Msa0797360:intron | 35.0% | |
| GATGTATGCTAAGGTCTTAA+AGG | + | chr5_3:9478133-9478152 | Msa0797360:intron | 35.0% | |
| !! | GGTCTTAAAGGTTAGTCTAT+TGG | + | chr5_3:9478145-9478164 | Msa0797360:intron | 35.0% |
| !! | CTTAAAGGTTAGTCTATTGG+GGG | + | chr5_3:9478148-9478167 | Msa0797360:intron | 35.0% |
| GAACCAACTCGAATATAGTT+TGG | + | chr5_3:9478249-9478268 | Msa0797360:intron | 35.0% | |
| GTTCCAAACTATATTCGAGT+TGG | - | chr5_3:9478255-9478274 | None:intergenic | 35.0% | |
| GACAATTAACTCGTTGAGTT+TGG | + | chr5_3:9478282-9478301 | Msa0797360:intron | 35.0% | |
| ! | TAGCTCAAGTTTAGCTCATT+TGG | - | chr5_3:9478316-9478335 | None:intergenic | 35.0% |
| AACTTGAGCTATGCATAGTT+CGG | + | chr5_3:9478365-9478384 | Msa0797360:intron | 35.0% | |
| TTACAAAACAAACAATGGGG+TGG | - | chr5_3:9478718-9478737 | None:intergenic | 35.0% | |
| ATCAGAAGGAAGAAAACTGA+TGG | + | chr5_3:9478874-9478893 | Msa0797360:intron | 35.0% | |
| GTTAACTAAATAGCCGATGT+GGG | - | chr5_3:9478968-9478987 | None:intergenic | 35.0% | |
| TGTTAACTAAATAGCCGATG+TGG | - | chr5_3:9478969-9478988 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | - | chr5_3:9479040-9479059 | None:intergenic | 35.0% | |
| CTTGGAAATGGTTATCACTA+TGG | - | chr5_3:9479285-9479304 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTTAAGCTCGAGTT+CGG | - | chr5_3:9479425-9479444 | None:intergenic | 35.0% |
| TAATTAACGGTACTTAGGGT+TGG | - | chr5_3:9479534-9479553 | None:intergenic | 35.0% | |
| TACATGTTCATGTTACGACA+TGG | - | chr5_3:9479846-9479865 | None:intergenic | 35.0% | |
| !! | GGAGTATTTTCTTACCTCAT+TGG | + | chr5_3:9479901-9479920 | Msa0797360:three_prime_UTR | 35.0% |
| TGGTGTTTGAGTATCAGATT+GGG | + | chr5_3:9479936-9479955 | Msa0797360:three_prime_UTR | 35.0% | |
| GAACCACACCACAAATAATT+AGG | - | chr5_3:9479991-9480010 | None:intergenic | 35.0% | |
| !!! | CAAGCTTCTTGTATTTTGGT+TGG | + | chr5_3:9480035-9480054 | Msa0797360:three_prime_UTR | 35.0% |
| CAAACGCATCATCAATTAGC+TGG | + | chr5_3:9472848-9472867 | Msa0797360:CDS | 40.0% | |
| TGGAACAACTTCATGCAAAG+TGG | - | chr5_3:9473224-9473243 | None:intergenic | 40.0% | |
| GGTAGTTGTGTTTGTGACAA+TGG | - | chr5_3:9473244-9473263 | None:intergenic | 40.0% | |
| CACAAAGACAAGAGACTAAG+AGG | + | chr5_3:9473317-9473336 | Msa0797360:CDS | 40.0% | |
| TGATCATCAAGACCGTATCA+TGG | + | chr5_3:9473351-9473370 | Msa0797360:CDS | 40.0% | |
| ! | TCTTATTCCTGGCTTGAAGA+AGG | + | chr5_3:9473426-9473445 | Msa0797360:CDS | 40.0% |
| GTTTCGATCCCATGTCTAAA+AGG | - | chr5_3:9473682-9473701 | None:intergenic | 40.0% | |
| !! | GATGACTCGGTTAGATAACT+CGG | + | chr5_3:9473843-9473862 | Msa0797360:intron | 40.0% |
| CGAGTTAATCCGAGTTAATC+CGG | - | chr5_3:9473899-9473918 | None:intergenic | 40.0% | |
| CGGATTAACTCGGATTAACT+CGG | + | chr5_3:9473897-9473916 | Msa0797360:intron | 40.0% | |
| CGGATTAACTCGGATTGAAT+CGG | + | chr5_3:9473907-9473926 | Msa0797360:intron | 40.0% | |
| CTCAATCAATCTTGACTCCT+TGG | - | chr5_3:9474210-9474229 | None:intergenic | 40.0% | |
| TGGACAAAAACGTGCTCATA+AGG | + | chr5_3:9475068-9475087 | Msa0797360:CDS | 40.0% | |
| !! | AACTCTTTTGCTTTTGGCAC+TGG | - | chr5_3:9475096-9475115 | None:intergenic | 40.0% |
| ! | TCACTGTGATGGGAAGTTAA+AGG | - | chr5_3:9475448-9475467 | None:intergenic | 40.0% |
| ATACCAGCAATCACTGTGAT+GGG | - | chr5_3:9475458-9475477 | None:intergenic | 40.0% | |
| !! | TTAGGTTGATCGAGAGATGA+TGG | - | chr5_3:9475584-9475603 | None:intergenic | 40.0% |
| AATCCAACACAGCAAGAGAA+GGG | - | chr5_3:9475779-9475798 | None:intergenic | 40.0% | |
| TAATCCAACACAGCAAGAGA+AGG | - | chr5_3:9475780-9475799 | None:intergenic | 40.0% | |
| AAATGTACTGAGAGATGGAG+TGG | + | chr5_3:9476158-9476177 | Msa0797360:intron | 40.0% | |
| ! | TTTTGTTACAAGCCACCCTT+TGG | + | chr5_3:9476342-9476361 | Msa0797360:intron | 40.0% |
| ! | TGTCTTTTCGCAAAAGCTCA+TGG | + | chr5_3:9476664-9476683 | Msa0797360:intron | 40.0% |
| GTAAATTGTTGGAGTGGAAG+AGG | + | chr5_3:9476773-9476792 | Msa0797360:intron | 40.0% | |
| TTGGAGTGGAAGAGGAAATT+AGG | + | chr5_3:9476781-9476800 | Msa0797360:intron | 40.0% | |
| TGGAGTGGAAGAGGAAATTA+GGG | + | chr5_3:9476782-9476801 | Msa0797360:intron | 40.0% | |
| TTTGACCTATTACCCGTCAT+AGG | + | chr5_3:9476878-9476897 | Msa0797360:intron | 40.0% | |
| CTTAAATGTGAGCCTATGAC+GGG | - | chr5_3:9476893-9476912 | None:intergenic | 40.0% | |
| CCTTAAATGTGAGCCTATGA+CGG | - | chr5_3:9476894-9476913 | None:intergenic | 40.0% | |
| ! | ATAGGCTCACATTTAAGGTG+TGG | + | chr5_3:9476896-9476915 | Msa0797360:intron | 40.0% |
| ! | GTGTGGTCTGACCTTTTTAA+AGG | + | chr5_3:9476913-9476932 | Msa0797360:intron | 40.0% |
| ! | CCTTGTTTGATAAGAAGGCT+AGG | - | chr5_3:9477290-9477309 | None:intergenic | 40.0% |
| ! | CCTAGCCTTCTTATCAAACA+AGG | + | chr5_3:9477287-9477306 | Msa0797360:intron | 40.0% |
| AGCCTTCTTATCAAACAAGG+CGG | + | chr5_3:9477290-9477309 | Msa0797360:intron | 40.0% | |
| !! | GGTCGAGTTAGGCTTTAAAT+AGG | + | chr5_3:9477311-9477330 | Msa0797360:intron | 40.0% |
| ! | ATTACATGTCCTCTAGAGGT+GGG | - | chr5_3:9477374-9477393 | None:intergenic | 40.0% |
| ! | AATTACATGTCCTCTAGAGG+TGG | - | chr5_3:9477375-9477394 | None:intergenic | 40.0% |
| ! | ACCTCTAGAGGACATGTAAT+TGG | + | chr5_3:9477374-9477393 | Msa0797360:intron | 40.0% |
| ACCAATTACATGTCCTCTAG+AGG | - | chr5_3:9477378-9477397 | None:intergenic | 40.0% | |
| TGGCTAAAACGACACTCATT+TGG | + | chr5_3:9477759-9477778 | Msa0797360:intron | 40.0% | |
| GACACTCATTTGGAAACAGA+GGG | + | chr5_3:9477769-9477788 | Msa0797360:intron | 40.0% | |
| ! | CGACATATAATTTGAGACGG+AGG | + | chr5_3:9478100-9478119 | Msa0797360:intron | 40.0% |
| ! | ATATAATTTGAGACGGAGGG+AGG | + | chr5_3:9478104-9478123 | Msa0797360:intron | 40.0% |
| GTTCATTGCCAACCCTTAAA+AGG | - | chr5_3:9478228-9478247 | None:intergenic | 40.0% | |
| ACAACGAAAAACCCAGAGAA+AGG | - | chr5_3:9478629-9478648 | None:intergenic | 40.0% | |
| ! | TCTGGGTTTTTCGTTGTGTT+TGG | + | chr5_3:9478632-9478651 | Msa0797360:intron | 40.0% |
| ! | ACTGATGGCGTATGAATTCA+CGG | + | chr5_3:9478889-9478908 | Msa0797360:intron | 40.0% |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | chr5_3:9479097-9479116 | None:intergenic | 40.0% | |
| ATGCATAGTACTGTCACTCA+CGG | + | chr5_3:9479239-9479258 | Msa0797360:intron | 40.0% | |
| CCGAACTCGAGCTTAAAAAA+AGG | + | chr5_3:9479422-9479441 | Msa0797360:intron | 40.0% | |
| CGACTCGATAAGAATTAGCT+CGG | - | chr5_3:9479477-9479496 | None:intergenic | 40.0% | |
| CGTAACATGAACATGTAGTC+CGG | + | chr5_3:9479849-9479868 | Msa0797360:exon | 40.0% | |
| GTGGTGTTTGAGTATCAGAT+TGG | + | chr5_3:9479935-9479954 | Msa0797360:three_prime_UTR | 40.0% | |
| GCTCCTAATTATTTGTGGTG+TGG | + | chr5_3:9479985-9480004 | Msa0797360:three_prime_UTR | 40.0% | |
| TCATCAAGACCGTATCATGG+CGG | + | chr5_3:9473354-9473373 | Msa0797360:CDS | 45.0% | |
| TCTTTCTCTCCGCCATGATA+CGG | - | chr5_3:9473366-9473385 | None:intergenic | 45.0% | |
| ACTCTAGCTGCTCTTATTCC+TGG | + | chr5_3:9473415-9473434 | Msa0797360:CDS | 45.0% | |
| CAACATACCTTCTTCAAGCC+AGG | - | chr5_3:9473436-9473455 | None:intergenic | 45.0% | |
| ATGGGATCGAAACTACCGTT+TGG | + | chr5_3:9473689-9473708 | Msa0797360:intron | 45.0% | |
| ! | CATAGTTTTCAGACTCGGCT+CGG | + | chr5_3:9473729-9473748 | Msa0797360:intron | 45.0% |
| CGGTCAAAACCGGTAAAAAC+CGG | - | chr5_3:9474332-9474351 | None:intergenic | 45.0% | |
| GCAGTTAACTCGGTCAAACT+CGG | - | chr5_3:9474352-9474371 | None:intergenic | 45.0% | |
| GTTTGACCGAGTTAACTGCA+TGG | + | chr5_3:9474353-9474372 | Msa0797360:intron | 45.0% | |
| GTTCGAGCCAACATTTGGAT+CGG | - | chr5_3:9474379-9474398 | None:intergenic | 45.0% | |
| !! | ATCCAAATGTTGGCTCGAAC+CGG | + | chr5_3:9474379-9474398 | Msa0797360:intron | 45.0% |
| !! | ATTAATAACTCGGCTCGGAC+CGG | - | chr5_3:9474442-9474461 | None:intergenic | 45.0% |
| ACGGACAAGACTTCAGTCAT+AGG | + | chr5_3:9474854-9474873 | Msa0797360:CDS | 45.0% | |
| CGCAGCTAAGTTACAAGTCA+TGG | + | chr5_3:9474978-9474997 | Msa0797360:CDS | 45.0% | |
| TAATGAAGATCTCCTCCACG+TGG | + | chr5_3:9475033-9475052 | Msa0797360:CDS | 45.0% | |
| !! | AAATTTTGGCATCCACGTGG+AGG | - | chr5_3:9475048-9475067 | None:intergenic | 45.0% |
| !! | CCAAAATTTTGGCATCCACG+TGG | - | chr5_3:9475051-9475070 | None:intergenic | 45.0% |
| ! | CCACGTGGATGCCAAAATTT+TGG | + | chr5_3:9475048-9475067 | Msa0797360:CDS | 45.0% |
| AATAGCAGCGTCCTAGCTAT+TGG | + | chr5_3:9475166-9475185 | Msa0797360:intron | 45.0% | |
| ATAGCAGCGTCCTAGCTATT+GGG | + | chr5_3:9475167-9475186 | Msa0797360:intron | 45.0% | |
| GGATAGAATCCCCAATAGCT+AGG | - | chr5_3:9475180-9475199 | None:intergenic | 45.0% | |
| GATACCAGCAATCACTGTGA+TGG | - | chr5_3:9475459-9475478 | None:intergenic | 45.0% | |
| AGCACCGTTGACAGTAATGT+TGG | - | chr5_3:9475915-9475934 | None:intergenic | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | - | chr5_3:9476357-9476376 | None:intergenic | 45.0% | |
| TGTTACAAGACACCCTTTGG+TGG | + | chr5_3:9476554-9476573 | Msa0797360:intron | 45.0% | |
| !! | GGGAAAAAAATGGGCTAGAC+CGG | + | chr5_3:9476802-9476821 | Msa0797360:intron | 45.0% |
| !! | GGAAAAAAATGGGCTAGACC+GGG | + | chr5_3:9476803-9476822 | Msa0797360:intron | 45.0% |
| CCGTCATAGGCTCACATTTA+AGG | + | chr5_3:9476891-9476910 | Msa0797360:intron | 45.0% | |
| GTCGACCTGATGTGCTTAAT+AGG | + | chr5_3:9477204-9477223 | Msa0797360:intron | 45.0% | |
| !! | GACCGCCTTGTTTGATAAGA+AGG | - | chr5_3:9477295-9477314 | None:intergenic | 45.0% |
| CGACACTCATTTGGAAACAG+AGG | + | chr5_3:9477768-9477787 | Msa0797360:intron | 45.0% | |
| TTGTATTGTAGGCCCTTGTC+TGG | + | chr5_3:9477840-9477859 | Msa0797360:intron | 45.0% | |
| CTAGGTCAAGTACCAGACAA+GGG | - | chr5_3:9477855-9477874 | None:intergenic | 45.0% | |
| ACTAGGTCAAGTACCAGACA+AGG | - | chr5_3:9477856-9477875 | None:intergenic | 45.0% | |
| ! | TTTCCTCTAGAGATGGGACT+AGG | - | chr5_3:9477873-9477892 | None:intergenic | 45.0% |
| AACTCTCAACCGACAACCTA+AGG | - | chr5_3:9478201-9478220 | None:intergenic | 45.0% | |
| ! | TATGCATAGTTCGGCTCGTT+TGG | + | chr5_3:9478374-9478393 | Msa0797360:intron | 45.0% |
| AGTAGCTACTAGTCCCACAT+CGG | + | chr5_3:9478952-9478971 | Msa0797360:intron | 45.0% | |
| CACTGCTATCTATGCCAATG+AGG | - | chr5_3:9479918-9479937 | None:intergenic | 45.0% | |
| CTCATTGGCATAGATAGCAG+TGG | + | chr5_3:9479916-9479935 | Msa0797360:three_prime_UTR | 45.0% | |
| !!! | TTATATAAATATTTTTTGTT+CGG | + | chr5_3:9473517-9473536 | Msa0797360:intron | 5.0% |
| !! | AAATATATATATATAGATAT+AGG | + | chr5_3:9475246-9475265 | Msa0797360:intron | 5.0% |
| !! | AATATATATATATAGATATA+GGG | + | chr5_3:9475247-9475266 | Msa0797360:intron | 5.0% |
| !! | CATATATATATATATATATA+TGG | - | chr5_3:9476527-9476546 | None:intergenic | 5.0% |
| !! | CATATATATATATATATATA+TGG | + | chr5_3:9476527-9476546 | Msa0797360:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTAAAC+AGG | + | chr5_3:9478658-9478677 | Msa0797360:intron | 5.0% |
| !! | AAATAAAATATATTAAAGAA+AGG | - | chr5_3:9480160-9480179 | None:intergenic | 5.0% |
| !!! | TCTTTAATATATTTTATTTT+TGG | + | chr5_3:9480161-9480180 | Msa0797360:three_prime_UTR | 5.0% |
| ATGACTGAACCGGAACCACT+CGG | + | chr5_3:9473821-9473840 | Msa0797360:intron | 50.0% | |
| ATCTAACCGAGTCATCCGAG+TGG | - | chr5_3:9473839-9473858 | None:intergenic | 50.0% | |
| CTCGGATTGAATCGGTGACT+CGG | + | chr5_3:9473915-9473934 | Msa0797360:intron | 50.0% | |
| ACCGGTAAAAACCGGTGACT+CGG | - | chr5_3:9474324-9474343 | None:intergenic | 50.0% | |
| CGGTCAAACTCGGTCAAAAC+CGG | - | chr5_3:9474342-9474361 | None:intergenic | 50.0% | |
| GATCGGCCATGCAGTTAACT+CGG | - | chr5_3:9474362-9474381 | None:intergenic | 50.0% | |
| TGCATGGCCGATCCAAATGT+TGG | + | chr5_3:9474369-9474388 | Msa0797360:intron | 50.0% | |
| TAGCAGCGTCCTAGCTATTG+GGG | + | chr5_3:9475168-9475187 | Msa0797360:intron | 50.0% | |
| CTTCCCATCACAGTGATTGC+TGG | + | chr5_3:9475452-9475471 | Msa0797360:intron | 50.0% | |
| TGTTACAAGCCACCCTTTGG+TGG | + | chr5_3:9476345-9476364 | Msa0797360:intron | 50.0% | |
| AGGCTTTGCAAAGTTCGACC+CGG | - | chr5_3:9476824-9476843 | None:intergenic | 50.0% | |
| !! | GTGAGCCTATGACGGGTAAT+AGG | - | chr5_3:9476886-9476905 | None:intergenic | 50.0% |
| TCAAACAAGGCGGTCGAGTT+AGG | + | chr5_3:9477300-9477319 | Msa0797360:intron | 50.0% | |
| TGACCTAGTCCCATCTCTAG+AGG | + | chr5_3:9477867-9477886 | Msa0797360:intron | 50.0% | |
| GTTAGGTTCAACTCGGTTGG+AGG | - | chr5_3:9479367-9479386 | None:intergenic | 50.0% | |
| CTCGTTAGGTTCAACTCGGT+TGG | - | chr5_3:9479370-9479389 | None:intergenic | 50.0% | |
| ! | TCGGCTCGTTAGGTTCAACT+CGG | - | chr5_3:9479374-9479393 | None:intergenic | 50.0% |
| AGTTGACGAACAGCTCGACT+CGG | - | chr5_3:9479393-9479412 | None:intergenic | 50.0% | |
| GTACTGGGTCACTGGGTCAA+TGG | + | chr5_3:9473769-9473788 | Msa0797360:intron | 55.0% | |
| TGGGTCAATGGTCGAACCAC+TGG | + | chr5_3:9473781-9473800 | Msa0797360:intron | 55.0% | |
| GGGTCAATGGTCGAACCACT+GGG | + | chr5_3:9473782-9473801 | Msa0797360:intron | 55.0% | |
| GTCGAACCGCATGACTGAAC+CGG | + | chr5_3:9473811-9473830 | Msa0797360:intron | 55.0% | |
| GTGGTTCCGGTTCAGTCATG+CGG | - | chr5_3:9473820-9473839 | None:intergenic | 55.0% | |
| AACCGGTCTGACCCATGACT+CGG | + | chr5_3:9474298-9474317 | Msa0797360:intron | 55.0% | |
| !!! | GCCGAGTCACCGGTTTTTAC+CGG | + | chr5_3:9474320-9474339 | Msa0797360:intron | 55.0% |
| !! | AGCCGGTTCGAGCCAACATT+TGG | - | chr5_3:9474384-9474403 | None:intergenic | 55.0% |
| CCAACACAGCAAGAGAAGGG+AGG | - | chr5_3:9475776-9475795 | None:intergenic | 55.0% | |
| ! | CCTCCCTTCTCTTGCTGTGT+TGG | + | chr5_3:9475773-9475792 | Msa0797360:intron | 55.0% |
| !! | ACTCGGCTCGGTCATCGACT+CGG | + | chr5_3:9473741-9473760 | Msa0797360:intron | 60.0% |
| TGGTCGAACCACTGGGTCGT+TGG | + | chr5_3:9473789-9473808 | Msa0797360:intron | 60.0% | |
| CCGAGTCATCCGAGTGGTTC+CGG | - | chr5_3:9473833-9473852 | None:intergenic | 60.0% | |
| CCGGAACCACTCGGATGACT+CGG | + | chr5_3:9473830-9473849 | Msa0797360:intron | 60.0% | |
| GTTAGGTGTCAGGCCCTCGT+TGG | + | chr5_3:9477333-9477352 | Msa0797360:intron | 60.0% | |
| CAGGTCAAGCCGTCCAACGA+GGG | - | chr5_3:9477349-9477368 | None:intergenic | 60.0% | |
| TGACCTGGTCCCACCTCTAG+AGG | + | chr5_3:9477362-9477381 | Msa0797360:intron | 60.0% | |
| ! | TGTCCTCTAGAGGTGGGACC+AGG | - | chr5_3:9477368-9477387 | None:intergenic | 60.0% |
| !! | ACAGCTCGACTCGGCTCGTT+AGG | - | chr5_3:9479384-9479403 | None:intergenic | 60.0% |
| !! | ATCGACTCGGCGGGGGTACT+GGG | + | chr5_3:9473754-9473773 | Msa0797360:intron | 65.0% |
| CGGTTCGACCAACGACCCAG+TGG | - | chr5_3:9473800-9473819 | None:intergenic | 65.0% | |
| GGCCGAGTCATGGGTCAGAC+CGG | - | chr5_3:9474303-9474322 | None:intergenic | 65.0% | |
| ! | CGGTGACTCGGCCGAGTCAT+GGG | - | chr5_3:9474312-9474331 | None:intergenic | 65.0% |
| ! | CCATGACTCGGCCGAGTCAC+CGG | + | chr5_3:9474310-9474329 | Msa0797360:intron | 65.0% |
| ! | GCTCGAACCGGCTTACCCAC+CGG | + | chr5_3:9474391-9474410 | Msa0797360:intron | 65.0% |
| CCGTGAACCGGTGGGTAAGC+CGG | - | chr5_3:9474401-9474420 | None:intergenic | 65.0% | |
| !! | CCGGCTTACCCACCGGTTCA+CGG | + | chr5_3:9474398-9474417 | Msa0797360:intron | 65.0% |
| !! | ATAACTCGGCTCGGACCGGC+CGG | - | chr5_3:9474438-9474457 | None:intergenic | 65.0% |
| GGTGTCAGGCCCTCGTTGGA+CGG | + | chr5_3:9477337-9477356 | Msa0797360:intron | 65.0% | |
| CCAGGTCAAGCCGTCCAACG+AGG | - | chr5_3:9477350-9477369 | None:intergenic | 65.0% | |
| CCTCGTTGGACGGCTTGACC+TGG | + | chr5_3:9477347-9477366 | Msa0797360:intron | 65.0% | |
| !! | CGGCTCGGTCATCGACTCGG+CGG | + | chr5_3:9473744-9473763 | Msa0797360:intron | 70.0% |
| !! | GGCTCGGTCATCGACTCGGC+GGG | + | chr5_3:9473745-9473764 | Msa0797360:intron | 70.0% |
| !! | GCTCGGTCATCGACTCGGCG+GGG | + | chr5_3:9473746-9473765 | Msa0797360:intron | 70.0% |
| !! | CTCGGTCATCGACTCGGCGG+GGG | + | chr5_3:9473747-9473766 | Msa0797360:intron | 70.0% |
| !! | CATCGACTCGGCGGGGGTAC+TGG | + | chr5_3:9473753-9473772 | Msa0797360:intron | 70.0% |
| !! | GGCGGGGGTACTGGGTCACT+GGG | + | chr5_3:9473762-9473781 | Msa0797360:intron | 70.0% |
| ! | CCGGTGACTCGGCCGAGTCA+TGG | - | chr5_3:9474313-9474332 | None:intergenic | 70.0% |
| CGGTCGGACCGTGAACCGGT+GGG | - | chr5_3:9474409-9474428 | None:intergenic | 70.0% | |
| !! | CCACCGGTTCACGGTCCGAC+CGG | + | chr5_3:9474407-9474426 | Msa0797360:intron | 70.0% |
| GGACCGGTCGGACCGTGAAC+CGG | - | chr5_3:9474413-9474432 | None:intergenic | 70.0% | |
| !! | CGGCGGGGGTACTGGGTCAC+TGG | + | chr5_3:9473761-9473780 | Msa0797360:intron | 75.0% |
| CCGGTCGGACCGTGAACCGG+TGG | - | chr5_3:9474410-9474429 | None:intergenic | 75.0% | |
| CACGGTCCGACCGGTCCGAC+CGG | + | chr5_3:9474416-9474435 | Msa0797360:intron | 75.0% | |
| ! | GTCCGACCGGTCCGACCGGC+CGG | + | chr5_3:9474420-9474439 | Msa0797360:intron | 80.0% |
| ! | GACCGGCCGGTCGGACCGGT+CGG | - | chr5_3:9474425-9474444 | None:intergenic | 80.0% |
| ! | CTCGGACCGGCCGGTCGGAC+CGG | - | chr5_3:9474429-9474448 | None:intergenic | 80.0% |
| !!! | CTCGGCTCGGACCGGCCGGT+CGG | - | chr5_3:9474434-9474453 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 9472726 | 9480191 | 9472726 | ID=Msa0797360;Name=Msa0797360 |
| chr5_3 | mRNA | 9472726 | 9480191 | 9472726 | ID=Msa0797360-mRNA-1;Parent=Msa0797360;Name=Msa0797360-mRNA-1;_AED=0.04;_eAED=0.04;_QI=100|0.5|0.6|1|0.5|0.6|5|338|288 |
| chr5_3 | exon | 9472726 | 9472882 | 9472726 | ID=Msa0797360-mRNA-1:exon:4100;Parent=Msa0797360-mRNA-1 |
| chr5_3 | exon | 9473007 | 9473447 | 9473007 | ID=Msa0797360-mRNA-1:exon:4101;Parent=Msa0797360-mRNA-1 |
| chr5_3 | exon | 9474854 | 9474944 | 9474854 | ID=Msa0797360-mRNA-1:exon:4102;Parent=Msa0797360-mRNA-1 |
| chr5_3 | exon | 9474963 | 9475162 | 9474963 | ID=Msa0797360-mRNA-1:exon:4103;Parent=Msa0797360-mRNA-1 |
| chr5_3 | exon | 9479776 | 9480191 | 9479776 | ID=Msa0797360-mRNA-1:exon:4104;Parent=Msa0797360-mRNA-1 |
| chr5_3 | five_prime_UTR | 9472726 | 9472825 | 9472726 | ID=Msa0797360-mRNA-1:five_prime_utr;Parent=Msa0797360-mRNA-1 |
| chr5_3 | CDS | 9472826 | 9472882 | 9472826 | ID=Msa0797360-mRNA-1:cds;Parent=Msa0797360-mRNA-1 |
| chr5_3 | CDS | 9473007 | 9473447 | 9473007 | ID=Msa0797360-mRNA-1:cds;Parent=Msa0797360-mRNA-1 |
| chr5_3 | CDS | 9474854 | 9474944 | 9474854 | ID=Msa0797360-mRNA-1:cds;Parent=Msa0797360-mRNA-1 |
| chr5_3 | CDS | 9474963 | 9475162 | 9474963 | ID=Msa0797360-mRNA-1:cds;Parent=Msa0797360-mRNA-1 |
| chr5_3 | CDS | 9479776 | 9479853 | 9479776 | ID=Msa0797360-mRNA-1:cds;Parent=Msa0797360-mRNA-1 |
| chr5_3 | three_prime_UTR | 9479854 | 9480191 | 9479854 | ID=Msa0797360-mRNA-1:three_prime_utr;Parent=Msa0797360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
