AlfalfaGEDB | Msa0834880

M. sativa cultivar zhongmu-4 / Msa0834880

KEGG: -
GO: GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00010.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0834880	XP_003611496.1	83.758	314	44	1	1	314	1	307	5.11e-177	501

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0834880	sp\|Q9T072\|BH025_ARATH	47.938	194	89	4	125	309	134	324	2.36e-48	167

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0834880	G7K128	83.758	314	44	1	1	314	1	307	2.44e-177	501

TFs/TRs:

Gene ID	Type	Classification
Msa0834880	TF	bHLH

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000550	Msa0834880	-0.806983	6.312019e-50	-8.615850e-47
Msa0006110	Msa0834880	0.812507	4.094180e-51	-8.615850e-47
Msa0011500	Msa0834880	0.804516	2.081094e-49	-8.615850e-47
Msa0014710	Msa0834880	0.810113	1.354579e-50	-8.615850e-47
Msa0017510	Msa0834880	0.820381	7.069299e-53	-8.615850e-47
Msa0022310	Msa0834880	0.807372	5.219455e-50	-8.615850e-47
Msa0022550	Msa0834880	0.814919	1.205773e-51	-8.615850e-47
Msa0036920	Msa0834880	0.816081	6.645966e-52	-8.615850e-47
Msa0045790	Msa0834880	0.814629	1.398019e-51	-8.615850e-47
Msa0046160	Msa0834880	0.814097	1.832111e-51	-8.615850e-47
Msa0055740	Msa0834880	0.817047	4.036993e-52	-8.615850e-47
Msa0068680	Msa0834880	0.801808	7.558732e-49	-8.615850e-47
Msa0074240	Msa0834880	0.850877	1.277753e-60	-8.615850e-47
Msa0087470	Msa0834880	0.819866	9.271949e-53	-8.615850e-47
Msa0094850	Msa0834880	0.803518	3.355101e-49	-8.615850e-47
Msa0095560	Msa0834880	0.800586	1.344450e-48	-8.615850e-47
Msa0101810	Msa0834880	-0.835440	1.675611e-56	-8.615850e-47
Msa0107640	Msa0834880	0.804311	2.295689e-49	-8.615850e-47
Msa0114060	Msa0834880	0.800000	1.769269e-48	-8.615850e-47
Msa0626510	Msa0834880	0.802849	4.615225e-49	-8.615850e-47
Msa0627450	Msa0834880	0.800581	1.347498e-48	-8.615850e-47
Msa0628360	Msa0834880	0.809069	2.270695e-50	-8.615850e-47
Msa0639430	Msa0834880	0.807026	6.180882e-50	-8.615850e-47
Msa0640860	Msa0834880	0.801968	7.010356e-49	-8.615850e-47
Msa0654930	Msa0834880	-0.806145	9.483872e-50	-8.615850e-47
Msa0657970	Msa0834880	0.806103	9.678746e-50	-8.615850e-47
Msa0658570	Msa0834880	0.803486	3.407784e-49	-8.615850e-47
Msa0667050	Msa0834880	0.806181	9.318110e-50	-8.615850e-47
Msa0682330	Msa0834880	0.820426	6.903706e-53	-8.615850e-47
Msa0682550	Msa0834880	0.803353	3.629722e-49	-8.615850e-47
Msa0683510	Msa0834880	0.817827	2.694836e-52	-8.615850e-47
Msa0691050	Msa0834880	0.822681	2.079470e-53	-8.615850e-47
Msa0693380	Msa0834880	0.805426	1.342313e-49	-8.615850e-47
Msa0711830	Msa0834880	0.800958	1.128868e-48	-8.615850e-47
Msa0712590	Msa0834880	0.823934	1.059973e-53	-8.615850e-47
Msa0713640	Msa0834880	0.896441	3.677918e-76	-8.615850e-47
Msa0724210	Msa0834880	0.818825	1.601162e-52	-8.615850e-47
Msa0731940	Msa0834880	0.834758	2.490824e-56	-8.615850e-47
Msa0735170	Msa0834880	0.818230	2.184202e-52	-8.615850e-47
Msa0750240	Msa0834880	0.817705	2.871465e-52	-8.615850e-47
Msa0754660	Msa0834880	0.859785	3.251406e-63	-8.615850e-47
Msa0756630	Msa0834880	-0.821694	3.523306e-53	-8.615850e-47
Msa0760130	Msa0834880	0.825589	4.316630e-54	-8.615850e-47
Msa0764130	Msa0834880	-0.814817	1.269953e-51	-8.615850e-47
Msa0790510	Msa0834880	0.809812	1.572672e-50	-8.615850e-47
Msa0797350	Msa0834880	0.811103	8.277675e-51	-8.615850e-47
Msa0797360	Msa0834880	0.860638	1.796219e-63	-8.615850e-47
Msa0810220	Msa0834880	0.829454	5.102005e-55	-8.615850e-47
Msa0816710	Msa0834880	0.826522	2.590086e-54	-8.615850e-47
Msa0824660	Msa0834880	0.809609	1.738441e-50	-8.615850e-47
Msa0828560	Msa0834880	0.811665	6.250197e-51	-8.615850e-47
Msa0830510	Msa0834880	0.809488	1.846028e-50	-8.615850e-47
Msa0834880	Msa0843780	-0.830321	3.136699e-55	-8.615850e-47
Msa0834880	Msa0844240	0.805748	1.149338e-49	-8.615850e-47
Msa0834880	Msa0856920	0.801145	1.033897e-48	-8.615850e-47
Msa0834880	Msa0861530	0.801539	8.586754e-49	-8.615850e-47
Msa0834880	Msa0867890	0.809170	2.159514e-50	-8.615850e-47
Msa0834880	Msa0870530	0.807193	5.696536e-50	-8.615850e-47
Msa0834880	Msa0880140	0.817247	3.640501e-52	-8.615850e-47
Msa0834880	Msa0880950	0.811884	5.600241e-51	-8.615850e-47
Msa0834880	Msa0891040	0.805765	1.140030e-49	-8.615850e-47
Msa0834880	Msa0900620	0.800928	1.145040e-48	-8.615850e-47
Msa0834880	Msa0903700	0.804829	1.789939e-49	-8.615850e-47
Msa0834880	Msa0908050	0.819392	1.189563e-52	-8.615850e-47
Msa0834880	Msa0910430	0.810343	1.208316e-50	-8.615850e-47
Msa0834880	Msa0926890	0.828259	9.930302e-55	-8.615850e-47
Msa0834880	Msa0938220	0.809625	1.724800e-50	-8.615850e-47
Msa0834880	Msa0948290	0.813852	2.075425e-51	-8.615850e-47
Msa0834880	Msa0954550	0.812903	3.354208e-51	-8.615850e-47
Msa0834880	Msa0969450	0.820609	6.266302e-53	-8.615850e-47
Msa0834880	Msa0969520	0.843757	1.151539e-58	-8.615850e-47
Msa0834880	Msa0973600	0.808346	3.239759e-50	-8.615850e-47
Msa0834880	Msa0974080	0.801444	8.976390e-49	-8.615850e-47
Msa0834880	Msa0989220	0.808427	3.113496e-50	-8.615850e-47
Msa0834880	Msa0990350	0.809588	1.757319e-50	-8.615850e-47
Msa0834880	Msa0990960	0.808388	3.174642e-50	-8.615850e-47
Msa0834880	Msa0993290	0.809165	2.165521e-50	-8.615850e-47
Msa0834880	Msa0993600	0.812016	5.240195e-51	-8.615850e-47
Msa0834880	Msa1000250	0.811835	5.739024e-51	-8.615850e-47
Msa0834880	Msa1014540	0.803067	4.160848e-49	-8.615850e-47
Msa0834880	Msa1024740	0.806579	7.682958e-50	-8.615850e-47
Msa0834880	Msa1028970	0.804488	2.108538e-49	-8.615850e-47
Msa0834880	Msa1061060	-0.806703	7.232082e-50	-8.615850e-47
Msa0834880	Msa1068200	-0.816565	5.178138e-52	-8.615850e-47
Msa0834880	Msa1075220	-0.816026	6.835058e-52	-8.615850e-47
Msa0834880	Msa1082500	0.835075	2.071791e-56	-8.615850e-47
Msa0834880	Msa1084260	0.819111	1.378550e-52	-8.615850e-47
Msa0834880	Msa1085200	0.819013	1.451395e-52	-8.615850e-47
Msa0834880	Msa1102770	0.817435	3.302848e-52	-8.615850e-47
Msa0834880	Msa1108790	0.801506	8.719040e-49	-8.615850e-47
Msa0834880	Msa1121450	-0.803866	2.841090e-49	-8.615850e-47
Msa0834880	Msa1121490	0.810927	9.035385e-51	-8.615850e-47
Msa0834880	Msa1130270	-0.810365	1.195114e-50	-8.615850e-47
Msa0834880	Msa1130550	0.801191	1.011372e-48	-8.615850e-47
Msa0834880	Msa1137570	0.804763	1.848178e-49	-8.615850e-47
Msa0834880	Msa1139000	-0.800415	1.457095e-48	-8.615850e-47
Msa0834880	Msa1139890	0.807598	4.673850e-50	-8.615850e-47
Msa0834880	Msa1156340	-0.810063	1.388896e-50	-8.615850e-47
Msa0834880	Msa1158310	0.824080	9.798982e-54	-8.615850e-47
Msa0834880	Msa1160670	0.805155	1.530053e-49	-8.615850e-47
Msa0834880	Msa1162550	-0.814295	1.657109e-51	-8.615850e-47
Msa0834880	Msa1199570	0.806394	8.403148e-50	-8.615850e-47
Msa0834880	Msa1199830	-0.833880	4.135122e-56	-8.615850e-47
Msa0834880	Msa1238930	0.834650	2.651477e-56	-8.615850e-47
Msa0834880	Msa1267610	0.819911	9.059132e-53	-8.615850e-47
Msa0834880	Msa1270610	0.809973	1.452023e-50	-8.615850e-47
Msa0834880	Msa1282580	-0.810986	8.773224e-51	-8.615850e-47
Msa0834880	Msa1284680	0.807111	5.928987e-50	-8.615850e-47
Msa0834880	Msa1297290	0.805900	1.067482e-49	-8.615850e-47
Msa0834880	Msa1298370	0.802832	4.651966e-49	-8.615850e-47
Msa0834880	Msa1306850	0.821009	5.070306e-53	-8.615850e-47
Msa0834880	Msa1307210	0.816863	4.440631e-52	-8.615850e-47
Msa0834880	Msa1313150	0.830641	2.619643e-55	-8.615850e-47
Msa0834880	Msa1328710	0.808176	3.521563e-50	-8.615850e-47
Msa0834880	Msa1341520	0.829545	4.847222e-55	-8.615850e-47
Msa0834880	Msa1341570	0.812575	3.957298e-51	-8.615850e-47
Msa0834880	Msa1353470	0.810088	1.371740e-50	-8.615850e-47
Msa0834880	Msa1357240	0.810067	1.385770e-50	-8.615850e-47
Msa0834880	Msa1359040	0.811071	8.410004e-51	-8.615850e-47
Msa0834880	Msa1364470	-0.807503	4.895562e-50	-8.615850e-47
Msa0834880	Msa1376890	0.801582	8.410574e-49	-8.615850e-47
Msa0834880	Msa1379850	0.803891	2.807740e-49	-8.615850e-47
Msa0834880	Msa1385000	0.807166	5.772976e-50	-8.615850e-47
Msa0834880	Msa1386040	0.800595	1.339130e-48	-8.615850e-47
Msa0834880	Msa1392260	0.819826	9.470882e-53	-8.615850e-47
Msa0834880	Msa1408010	0.807741	4.358379e-50	-8.615850e-47
Msa0834880	Msa1408620	-0.815431	9.275656e-52	-8.615850e-47
Msa0834880	Msa1409700	0.809951	1.468006e-50	-8.615850e-47
Msa0834880	Msa1409870	0.819371	1.203282e-52	-8.615850e-47
Msa0834880	Msa1423880	0.839942	1.171868e-57	-8.615850e-47
Msa0834880	Msa1429900	0.809653	1.701028e-50	-8.615850e-47
Msa0834880	Msa1436480	0.809592	1.753193e-50	-8.615850e-47
Msa0834880	Msa1459050	0.809996	1.435287e-50	-8.615850e-47
Msa0834880	Msa1460020	0.801550	8.540514e-49	-8.615850e-47
Msa0834880	Msa1461300	0.803248	3.816014e-49	-8.615850e-47
Msa0834880	Msa1466540	0.808081	3.689533e-50	-8.615850e-47
Msa0123100	Msa0834880	0.836430	9.399915e-57	-8.615850e-47
Msa0123300	Msa0834880	0.820200	7.776469e-53	-8.615850e-47
Msa0131770	Msa0834880	0.809979	1.447555e-50	-8.615850e-47
Msa0133980	Msa0834880	-0.803887	2.812980e-49	-8.615850e-47
Msa0138370	Msa0834880	0.808787	2.608787e-50	-8.615850e-47
Msa0157290	Msa0834880	0.820703	5.963214e-53	-8.615850e-47
Msa0170140	Msa0834880	0.803858	2.851702e-49	-8.615850e-47
Msa0188150	Msa0834880	0.816937	4.274930e-52	-8.615850e-47
Msa0188830	Msa0834880	0.805394	1.363654e-49	-8.615850e-47
Msa0200260	Msa0834880	0.805974	1.030032e-49	-8.615850e-47
Msa0201070	Msa0834880	0.801631	8.221838e-49	-8.615850e-47
Msa0210450	Msa0834880	0.801205	1.005014e-48	-8.615850e-47
Msa0215320	Msa0834880	-0.827857	1.241118e-54	-8.615850e-47
Msa0220580	Msa0834880	0.805720	1.164926e-49	-8.615850e-47
Msa0221060	Msa0834880	0.814772	1.299490e-51	-8.615850e-47
Msa0223410	Msa0834880	-0.804535	2.061720e-49	-8.615850e-47
Msa0223690	Msa0834880	0.828898	6.960970e-55	-8.615850e-47
Msa0226250	Msa0834880	0.803525	3.343826e-49	-8.615850e-47
Msa0227470	Msa0834880	0.804039	2.615461e-49	-8.615850e-47
Msa0237310	Msa0834880	0.802241	6.159225e-49	-8.615850e-47
Msa0366240	Msa0834880	0.800140	1.657148e-48	-8.615850e-47
Msa0376590	Msa0834880	0.815150	1.071025e-51	-8.615850e-47
Msa0388960	Msa0834880	0.827858	1.240226e-54	-8.615850e-47
Msa0395790	Msa0834880	0.825889	3.664096e-54	-8.615850e-47
Msa0410650	Msa0834880	0.816888	4.384633e-52	-8.615850e-47
Msa0414170	Msa0834880	0.801174	1.019522e-48	-8.615850e-47
Msa0417270	Msa0834880	0.831513	1.599344e-55	-8.615850e-47
Msa0417880	Msa0834880	0.810616	1.055026e-50	-8.615850e-47
Msa0422280	Msa0834880	0.801286	9.671738e-49	-8.615850e-47
Msa0436370	Msa0834880	0.802666	5.034899e-49	-8.615850e-47
Msa0439970	Msa0834880	0.801034	1.089066e-48	-8.615850e-47
Msa0440750	Msa0834880	0.803618	3.199061e-49	-8.615850e-47
Msa0443260	Msa0834880	0.807869	4.093372e-50	-8.615850e-47
Msa0464260	Msa0834880	0.815633	8.364828e-52	-8.615850e-47
Msa0470690	Msa0834880	0.820348	7.191856e-53	-8.615850e-47
Msa0480980	Msa0834880	0.800253	1.571833e-48	-8.615850e-47
Msa0243100	Msa0834880	0.822329	2.511567e-53	-8.615850e-47
Msa0243890	Msa0834880	0.814754	1.311731e-51	-8.615850e-47
Msa0244860	Msa0834880	0.822550	2.231045e-53	-8.615850e-47
Msa0245940	Msa0834880	0.813141	2.973977e-51	-8.615850e-47
Msa0251080	Msa0834880	0.815197	1.045953e-51	-8.615850e-47
Msa0259500	Msa0834880	0.812105	5.011407e-51	-8.615850e-47
Msa0260820	Msa0834880	-0.818709	1.701561e-52	-8.615850e-47
Msa0261340	Msa0834880	0.813867	2.059014e-51	-8.615850e-47
Msa0262510	Msa0834880	0.828115	1.075552e-54	-8.615850e-47
Msa0264780	Msa0834880	0.817542	3.123795e-52	-8.615850e-47
Msa0266000	Msa0834880	-0.803666	3.126237e-49	-8.615850e-47
Msa0270100	Msa0834880	0.813919	2.005419e-51	-8.615850e-47
Msa0272730	Msa0834880	0.822549	2.232385e-53	-8.615850e-47
Msa0274360	Msa0834880	0.801117	1.047264e-48	-8.615850e-47
Msa0274730	Msa0834880	0.804391	2.209477e-49	-8.615850e-47
Msa0276920	Msa0834880	0.804537	2.059565e-49	-8.615850e-47
Msa0281640	Msa0834880	0.801506	8.720421e-49	-8.615850e-47
Msa0283450	Msa0834880	0.821362	4.203576e-53	-8.615850e-47
Msa0283520	Msa0834880	0.826015	3.419693e-54	-8.615850e-47
Msa0284520	Msa0834880	0.824109	9.644575e-54	-8.615850e-47
Msa0287650	Msa0834880	0.807247	5.548283e-50	-8.615850e-47
Msa0294950	Msa0834880	0.805911	1.062072e-49	-8.615850e-47
Msa0294960	Msa0834880	0.807478	4.957129e-50	-8.615850e-47
Msa0305700	Msa0834880	0.840060	1.091344e-57	-8.615850e-47
Msa0315530	Msa0834880	0.811262	7.646424e-51	-8.615850e-47
Msa0316800	Msa0834880	0.803274	3.769642e-49	-8.615850e-47
Msa0317730	Msa0834880	0.845058	5.143920e-59	-8.615850e-47
Msa0317740	Msa0834880	0.802111	6.550173e-49	-8.615850e-47
Msa0328070	Msa0834880	0.811641	6.326124e-51	-8.615850e-47
Msa0332000	Msa0834880	0.826565	2.529835e-54	-8.615850e-47
Msa0333720	Msa0834880	-0.807983	3.872094e-50	-8.615850e-47
Msa0334350	Msa0834880	0.810665	1.029348e-50	-8.615850e-47
Msa0338110	Msa0834880	0.821399	4.122342e-53	-8.615850e-47
Msa0340450	Msa0834880	0.811999	5.285092e-51	-8.615850e-47
Msa0341540	Msa0834880	0.802132	6.484973e-49	-8.615850e-47
Msa0345970	Msa0834880	0.802609	5.173466e-49	-8.615850e-47
Msa0357020	Msa0834880	0.804295	2.313744e-49	-8.615850e-47
Msa0483650	Msa0834880	0.803259	3.797405e-49	-8.615850e-47
Msa0484780	Msa0834880	0.809830	1.558789e-50	-8.615850e-47
Msa0503060	Msa0834880	0.810400	1.174463e-50	-8.615850e-47
Msa0507680	Msa0834880	0.824105	9.664915e-54	-8.615850e-47
Msa0509610	Msa0834880	0.809821	1.565605e-50	-8.615850e-47
Msa0512900	Msa0834880	0.809878	1.522016e-50	-8.615850e-47
Msa0516370	Msa0834880	0.821428	4.058125e-53	-8.615850e-47
Msa0520700	Msa0834880	0.808572	2.899717e-50	-8.615850e-47
Msa0546680	Msa0834880	0.822494	2.299462e-53	-8.615850e-47
Msa0548280	Msa0834880	-0.814340	1.619213e-51	-8.615850e-47
Msa0569200	Msa0834880	0.804088	2.554584e-49	-8.615850e-47
Msa0572420	Msa0834880	0.829909	3.953296e-55	-8.615850e-47
Msa0572480	Msa0834880	0.803614	3.204815e-49	-8.615850e-47
Msa0574760	Msa0834880	-0.805799	1.121126e-49	-8.615850e-47
Msa0601750	Msa0834880	0.801648	8.154913e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0834880	MtrunA17_Chr5g0400621	68.563	334	84	3	1	314	1	333	1.45e-131	377
Msa0834880	MtrunA17_Chr5g0400641	81.410	156	29	0	141	296	1	156	3.00e-82	246
Msa0834880	MtrunA17_Chr2g0307131	41.598	363	155	13	1	314	1	355	5.98e-60	195
Msa0834880	MtrunA17_Chr6g0468491	42.405	316	140	11	36	314	3	313	2.58e-56	184
Msa0834880	MtrunA17_Chr2g0307141	52.198	182	87	0	133	314	178	359	1.22e-51	174
Msa0834880	MtrunA17_Chr4g0033281	40.469	341	160	14	1	314	1	325	3.68e-51	172
Msa0834880	MtrunA17_Chr4g0033391	39.634	328	170	12	1	311	1	317	7.60e-50	168
Msa0834880	MtrunA17_Chr2g0280161	42.857	224	121	4	86	308	131	348	1.96e-48	165
Msa0834880	MtrunA17_Chr4g0054621	37.921	356	153	13	4	314	9	341	2.05e-47	162
Msa0834880	MtrunA17_Chr4g0054581	48.611	216	96	5	106	314	171	378	1.47e-46	161
Msa0834880	MtrunA17_Chr4g0033291	38.095	315	161	8	25	314	23	328	2.74e-46	159
Msa0834880	MtrunA17_Chr7g0225901	39.464	261	130	5	33	292	9	242	7.05e-46	155
Msa0834880	MtrunA17_Chr5g0400661	42.593	216	109	3	109	310	120	334	1.62e-45	157
Msa0834880	MtrunA17_Chr4g0049331	46.243	173	91	2	137	308	134	305	5.30e-44	152
Msa0834880	MtrunA17_Chr6g0468461	37.838	333	146	11	1	292	1	313	1.50e-43	152
Msa0834880	MtrunA17_Chr4g0054571	40.876	274	122	8	76	311	59	330	3.82e-40	143
Msa0834880	MtrunA17_Chr4g0002801	41.000	200	109	3	118	311	135	331	4.31e-38	137
Msa0834880	MtrunA17_Chr4g0054551	42.541	181	93	4	137	313	154	327	1.68e-36	133
Msa0834880	MtrunA17_Chr8g0336681	41.848	184	98	2	137	312	155	337	6.43e-36	132
Msa0834880	MtrunA17_Chr2g0333641	38.532	218	122	4	96	305	89	302	4.37e-35	129
Msa0834880	MtrunA17_Chr4g0054561	41.622	185	89	5	137	313	154	327	1.01e-34	129
Msa0834880	MtrunA17_Chr4g0002781	37.500	232	130	4	90	311	124	350	3.78e-34	127
Msa0834880	MtrunA17_Chr5g0400671	34.387	253	148	7	65	310	82	323	7.36e-34	126
Msa0834880	MtrunA17_Chr2g0333621	38.095	231	121	5	89	310	94	311	1.83e-33	125
Msa0834880	MtrunA17_Chr7g0249811	39.773	176	97	1	137	312	164	330	8.35e-33	124
Msa0834880	MtrunA17_Chr2g0333541	34.296	277	163	5	35	308	6	266	3.40e-30	115
Msa0834880	MtrunA17_Chr2g0333611	36.957	184	104	4	133	311	40	216	2.90e-28	108
Msa0834880	MtrunA17_Chr7g0233441	40.268	149	79	2	161	309	57	195	1.44e-26	103
Msa0834880	MtrunA17_Chr4g0002851	42.953	149	67	3	161	309	65	195	3.48e-25	100
Msa0834880	MtrunA17_Chr4g0002831	33.862	189	108	5	127	309	26	203	2.58e-22	92.8
Msa0834880	MtrunA17_Chr8g0366751	31.638	177	106	5	117	279	439	614	2.41e-13	70.5
Msa0834880	MtrunA17_Chr1g0185621	26.761	142	96	2	138	271	475	616	7.83e-13	68.9
Msa0834880	MtrunA17_Chr5g0411341	29.412	153	97	3	138	279	493	645	5.66e-12	66.2
Msa0834880	MtrunA17_Chr7g0275821	28.402	169	110	5	138	305	252	410	9.01e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0834880	AT4G37850.2	47.938	194	89	4	125	309	134	324	2.40e-49	167
Msa0834880	AT4G37850.1	47.938	194	89	4	125	309	134	324	2.40e-49	167
Msa0834880	AT2G22760.1	39.487	195	110	5	121	310	104	295	4.47e-35	129
Msa0834880	AT2G22750.2	44.211	190	95	3	126	305	109	297	1.82e-34	127
Msa0834880	AT2G22750.3	44.211	190	95	3	126	305	137	325	2.96e-34	128
Msa0834880	AT2G22750.5	44.211	190	95	3	126	305	133	321	3.23e-34	127
Msa0834880	AT2G22760.2	41.618	173	94	4	121	289	104	273	2.25e-32	122
Msa0834880	AT2G22750.1	43.684	190	95	4	126	305	109	296	3.79e-32	121
Msa0834880	AT2G22750.4	43.684	190	95	4	126	305	137	324	6.32e-32	121
Msa0834880	AT2G22770.1	35.638	188	106	2	137	309	131	318	9.89e-31	118
Msa0834880	AT4G17880.1	31.333	150	93	3	138	282	416	560	7.94e-14	72.4
Msa0834880	AT5G46760.1	31.373	153	87	4	138	279	415	560	6.79e-13	69.7
Msa0834880	AT1G32640.1	32.184	174	104	6	109	271	423	593	1.17e-12	68.9
Msa0834880	AT2G46510.1	38.462	78	47	1	117	193	373	450	8.85e-12	66.2
Msa0834880	AT1G01260.1	24.490	196	119	5	110	305	408	574	2.92e-11	64.7
Msa0834880	AT1G01260.2	24.490	196	119	5	110	305	408	574	2.92e-11	64.7
Msa0834880	AT1G01260.3	24.490	196	119	5	110	305	408	574	2.92e-11	64.7

Find 56 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGTCCTTTGGAAACAAATT+TGG	0.137791	5_4:+8158518	Msa0834880:CDS
CATTCAAGCTTCTTGTATTT+TGG	0.138695	5_4:+8165498	Msa0834880:three_prime_UTR
CATAATATCAATAGTTATTA+TGG	0.146036	5_4:+8158157	Msa0834880:exon
CCACGTGGATGCCAAAATTT+TGG	0.169781	5_4:+8159681	Msa0834880:CDS
CTAATACTCTCAAACGTTCT+TGG	0.224167	5_4:-8159537	None:intergenic
ACTCTAGCTGCTCTTATTCC+TGG	0.272370	5_4:+8158765	Msa0834880:CDS
TACAAGTCATGGAGTGATTA+TGG	0.283092	5_4:+8159622	Msa0834880:CDS
GAACCACACCACAAATAATT+AGG	0.315099	5_4:-8165455	None:intergenic
CAATTAGCTGGTTATCTGAT+TGG	0.321783	5_4:+8158210	Msa0834880:CDS
TGCTTAACAATTTCAGAGAT+TGG	0.328743	5_4:-8158115	None:intergenic
ATAGCAGCGTCCTAGCTATT+GGG	0.352128	5_4:+8159800	Msa0834880:CDS
AATAGCAGCGTCCTAGCTAT+TGG	0.355262	5_4:+8159799	Msa0834880:CDS
AAGTTATTCTTCTTGTCCTT+TGG	0.370526	5_4:+8158506	Msa0834880:CDS
ATGGAGTGATTATGGTTCTA+AGG	0.381575	5_4:+8159630	Msa0834880:CDS
CATAAGCTCCTAATTATTTG+TGG	0.383716	5_4:+8165447	Msa0834880:three_prime_UTR
TATTTATTGCAGAAAGAAAC+AGG	0.398821	5_4:+8165231	Msa0834880:intron
TTAAAGAAAGGAAGATGAAA+TGG	0.411223	5_4:-8165663	None:intergenic
AATTAGCTGGTTATCTGATT+GGG	0.417900	5_4:+8158211	Msa0834880:CDS
CAATGCGAACAAAACTTGTA+TGG	0.442147	5_4:+8158399	Msa0834880:CDS
CTCTGAAATTGTTAAGCAAA+AGG	0.444951	5_4:+8158120	Msa0834880:five_prime_UTR
ATTTGAAGAAAATGAAATAG+AGG	0.453578	5_4:+8158359	Msa0834880:CDS
CGCAGCTAAGTTACAAGTCA+TGG	0.456135	5_4:+8159611	Msa0834880:CDS
CTTTCCAAATTTGTTTCCAA+AGG	0.463702	5_4:-8158522	None:intergenic
CAAACGCATCATCAATTAGC+TGG	0.468053	5_4:+8158198	Msa0834880:CDS
AACAAATACATCCCAAATCA+AGG	0.480151	5_4:-8165608	None:intergenic
GTGGTGTTTGAGTATCAGAT+TGG	0.490552	5_4:+8165402	Msa0834880:three_prime_UTR
TCTTTCTCTCCGCCATGATA+CGG	0.492627	5_4:-8158713	None:intergenic
TCTTATTCCTGGCTTGAAGA+AGG	0.494711	5_4:+8158776	Msa0834880:CDS
AGTATTATTATTTCATCGAC+CGG	0.498715	5_4:-8165335	None:intergenic
CAAGAAGAATAACTTTCAAA+AGG	0.505322	5_4:-8158498	None:intergenic
ACGGACAAGACTTCAGTCAT+AGG	0.509641	5_4:+8159487	Msa0834880:CDS
CAACTACCTCAAAATCAAGA+AGG	0.526009	5_4:+8158606	Msa0834880:CDS
CAACATACCTTCTTCAAGCC+AGG	0.529759	5_4:-8158783	None:intergenic
TGACATAACAATCATTGCTC+GGG	0.533848	5_4:+8159834	Msa0834880:CDS
AAATAAAATATATTAAAGAA+AGG	0.536678	5_4:-8165675	None:intergenic
TTGACATAACAATCATTGCT+CGG	0.539889	5_4:+8159833	Msa0834880:CDS
GGTAGTTGTGTTTGTGACAA+TGG	0.540621	5_4:-8158591	None:intergenic
TGGTGTTTGAGTATCAGATT+GGG	0.541526	5_4:+8165403	Msa0834880:three_prime_UTR
GCTCCTAATTATTTGTGGTG+TGG	0.551267	5_4:+8165452	Msa0834880:three_prime_UTR
ATAATAATACTAAGATGTCA+TGG	0.553313	5_4:+8165347	Msa0834880:three_prime_UTR
GGATAGAATCCCCAATAGCT+AGG	0.566848	5_4:-8159810	None:intergenic
TGATCATCAAGACCGTATCA+TGG	0.571054	5_4:+8158701	Msa0834880:CDS
TTTGAAGAAAATGAAATAGA+GGG	0.571396	5_4:+8158360	Msa0834880:CDS
TAACTTTCAAAAGGTAACAA+TGG	0.572810	5_4:-8158489	None:intergenic
CAGAAAGACAAGGGACTAAG+AGG	0.576978	5_4:+8158667	Msa0834880:CDS
GAGCAATGATTGTTATGTCA+AGG	0.583989	5_4:-8159831	None:intergenic
CGTAACATGAACATGTAGTC+CGG	0.586244	5_4:+8165316	Msa0834880:exon
TAGCAGCGTCCTAGCTATTG+GGG	0.595786	5_4:+8159801	Msa0834880:CDS
AACTACCTCAAAATCAAGAA+GGG	0.608663	5_4:+8158607	Msa0834880:CDS
TGCTATTAACAACAGAGAGA+TGG	0.624062	5_4:-8159783	None:intergenic
TGGAACAACTTCATGCAAAG+TGG	0.630460	5_4:-8158571	None:intergenic
TACATGTTCATGTTACGACA+TGG	0.637585	5_4:-8165310	None:intergenic
CACTGCTATCTATGCCAATG+AGG	0.645769	5_4:-8165382	None:intergenic
CTCATTGGCATAGATAGCAG+TGG	0.655973	5_4:+8165383	Msa0834880:three_prime_UTR
TAATGAAGATCTCCTCCACG+TGG	0.724761	5_4:+8159666	Msa0834880:CDS
TCATCAAGACCGTATCATGG+CGG	0.756942	5_4:+8158704	Msa0834880:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAATTATTTTTATTTTTTAT+TGG	+	chr5_4:8161912-8161931	Msa0834880:intron	0.0%
!!!	AATTATTTTTATTTTTTATT+GGG	+	chr5_4:8161913-8161932	Msa0834880:intron	0.0%
!!	AATAAAAAATTAATAAAAAA+TGG	-	chr5_4:8162967-8162986	None:intergenic	0.0%
!!!	TTATTTTTTATTTTTTTATA+GGG	-	chr5_4:8163096-8163115	None:intergenic	0.0%
!!!	TTTATTTTTTATTTTTTTAT+AGG	-	chr5_4:8163097-8163116	None:intergenic	0.0%
!!	ATAAAAAAATAAAAAATAAA+AGG	+	chr5_4:8163097-8163116	Msa0834880:intron	0.0%
!!	ATATATATATATATATATAT+AGG	+	chr5_4:8159877-8159896	Msa0834880:intron	0.0%
!!	TATATATATATATATATATA+GGG	+	chr5_4:8159876-8159895	Msa0834880:intron	0.0%
!!!	TTATTAATTTTTGCATTTTT+GGG	+	chr5_4:8159086-8159105	Msa0834880:intron	10.0%
!!!	AGAAATAATTTTAATATGTT+TGG	+	chr5_4:8159132-8159151	Msa0834880:intron	10.0%
!!!	TGTAAAATAAGTTTTTAAAT+AGG	-	chr5_4:8160128-8160147	None:intergenic	10.0%
!!	TTATTTAATAACACATATAT+TGG	-	chr5_4:8160268-8160287	None:intergenic	10.0%
!!	TAAAGTCTATTTAATTAAAT+AGG	-	chr5_4:8160424-8160443	None:intergenic	10.0%
!!!	ATTTTTTTTTTTTATAAGCA+AGG	+	chr5_4:8161083-8161102	Msa0834880:intron	10.0%
!!	ATCTAAAAAAAAAATTTACA+GGG	-	chr5_4:8161775-8161794	None:intergenic	10.0%
!!	AATCTAAAAAAAAAATTTAC+AGG	-	chr5_4:8161776-8161795	None:intergenic	10.0%
!!	AAAATAAAATTTCGAAATTA+TGG	+	chr5_4:8162180-8162199	Msa0834880:intron	10.0%
!!!	TTTTTTTTAGTATTTTTTTC+GGG	+	chr5_4:8162510-8162529	Msa0834880:intron	10.0%
!!	ATGAAAAAAATTGAAAAAAA+CGG	-	chr5_4:8162899-8162918	None:intergenic	10.0%
!!	AAAAATAAAAAATAAAAGGA+CGG	+	chr5_4:8163101-8163120	Msa0834880:intron	10.0%
!!!	ATCTAAAATTTTTTTTTTAC+AGG	+	chr5_4:8163186-8163205	Msa0834880:intron	10.0%
!!!	TCTAAAATTTTTTTTTTACA+GGG	+	chr5_4:8163187-8163206	Msa0834880:intron	10.0%
!!	ATATATAGATATATATATAG+GGG	+	chr5_4:8164009-8164028	Msa0834880:intron	10.0%
!!	TATTAAAAAATTAACACTAA+AGG	-	chr5_4:8164165-8164184	None:intergenic	10.0%
!!	AAATAAAACATCATAAAAAA+GGG	-	chr5_4:8164438-8164457	None:intergenic	10.0%
!!!	TTTTTTCTCAAATAATTAAA+GGG	-	chr5_4:8165192-8165211	None:intergenic	10.0%
!!!	TTTTTCTATAGATGTTATAT+TGG	+	chr5_4:8158088-8158107	Msa0834880:five_prime_UTR	15.0%
!!	CATAATATCAATAGTTATTA+TGG	+	chr5_4:8158157-8158176	Msa0834880:exon	15.0%
!!!	TTGTATGAATGATTTTTATA+CGG	+	chr5_4:8158306-8158325	Msa0834880:intron	15.0%
!!!	GTTATTAATTTTTGCATTTT+TGG	+	chr5_4:8159085-8159104	Msa0834880:intron	15.0%
!!!	TAAAAACTTATTTTACACTA+AGG	+	chr5_4:8160131-8160150	Msa0834880:intron	15.0%
!!	AAGATTGCATTAATAAAATT+TGG	-	chr5_4:8160191-8160210	None:intergenic	15.0%
!!	TTATATATAAAACGTTGAAT+AGG	+	chr5_4:8160353-8160372	Msa0834880:intron	15.0%
!!	TATATATATATAGGGTTAAT+AGG	+	chr5_4:8161710-8161729	Msa0834880:intron	15.0%
!!	TCTAAAAAAAAAATTTACAG+GGG	-	chr5_4:8161774-8161793	None:intergenic	15.0%
!!!	TCCAGAATTTTAAAAATTTT+CGG	-	chr5_4:8162071-8162090	None:intergenic	15.0%
!!	TTTAAATTTGAATGAAATTC+TGG	+	chr5_4:8162223-8162242	Msa0834880:intron	15.0%
!!	TATTTATAAACCTAGAATAA+GGG	+	chr5_4:8162425-8162444	Msa0834880:intron	15.0%
!!!	ATTTTTGTGTATTTATAAAC+CGG	+	chr5_4:8162416-8162435	Msa0834880:intron	15.0%
!!	TATTTATAAACTGAGAATAA+GGG	+	chr5_4:8162568-8162587	Msa0834880:intron	15.0%
!!	AAAAATTCAGAAAAAAAATC+TGG	-	chr5_4:8162743-8162762	None:intergenic	15.0%
!!!	CTAAAATTTTTTTTTTACAG+GGG	+	chr5_4:8163188-8163207	Msa0834880:intron	15.0%
!!!	TAAAATTTTTTTTTTACAGG+GGG	+	chr5_4:8163189-8163208	Msa0834880:intron	15.0%
!!	TATATATATACATGGTTAAT+AGG	-	chr5_4:8163252-8163271	None:intergenic	15.0%
!!	AAAGGAATTAAGAAAATTAA+TGG	-	chr5_4:8164268-8164287	None:intergenic	15.0%
!!	AATAAAACATCATAAAAAAG+GGG	-	chr5_4:8164437-8164456	None:intergenic	15.0%
!!	GAAATAAAACATCATAAAAA+AGG	-	chr5_4:8164439-8164458	None:intergenic	15.0%
!!	TAAAATAGATGTAATTGTAT+TGG	-	chr5_4:8164484-8164503	None:intergenic	15.0%
!!!	ATTACATCTATTTTATATGT+TGG	+	chr5_4:8164489-8164508	Msa0834880:intron	15.0%
!!!	GTTTTTTCTCAAATAATTAA+AGG	-	chr5_4:8165193-8165212	None:intergenic	15.0%
!!	ATTTGAAGAAAATGAAATAG+AGG	+	chr5_4:8158359-8158378	Msa0834880:CDS	20.0%
!!	TTTGAAGAAAATGAAATAGA+GGG	+	chr5_4:8158360-8158379	Msa0834880:CDS	20.0%
!!	TAAAAAACAATCTAGAAGTT+AGG	+	chr5_4:8158922-8158941	Msa0834880:intron	20.0%
!!!	TTATTTAAGATAGATCGATT+TGG	+	chr5_4:8158990-8159009	Msa0834880:intron	20.0%
!!!	ACTAGTTAGCTATTAATTTT+AGG	+	chr5_4:8159414-8159433	Msa0834880:intron	20.0%
!!!	GAGTTTTTTGCTTAATAAAT+TGG	+	chr5_4:8159744-8159763	Msa0834880:CDS	20.0%
!!!	TATAATTTTTGAAGTATGTC+AGG	-	chr5_4:8160021-8160040	None:intergenic	20.0%
!!	TGACATACTTCAAAAATTAT+AGG	+	chr5_4:8160020-8160039	Msa0834880:intron	20.0%
!!	ATATTTAGTAGTAGGTTTAT+AGG	-	chr5_4:8160167-8160186	None:intergenic	20.0%
!!!	ACATGTAATTAGTTTTGTAT+AGG	+	chr5_4:8160555-8160574	Msa0834880:intron	20.0%
!!	ATTGTCCTTAATAAATGTTA+TGG	+	chr5_4:8160611-8160630	Msa0834880:intron	20.0%
!!	CTTTACCATAACATTTATTA+AGG	-	chr5_4:8160619-8160638	None:intergenic	20.0%
!!	AAATTATCCTAATCAACTAT+TGG	+	chr5_4:8160773-8160792	Msa0834880:intron	20.0%
!!!	TGTATATAGTATTGATTGAA+GGG	+	chr5_4:8160836-8160855	Msa0834880:intron	20.0%
!!	AGAAAAAGTTATTATTGCAT+TGG	+	chr5_4:8160870-8160889	Msa0834880:intron	20.0%
!!	TAATGTTTCATTTGTATTGT+AGG	+	chr5_4:8161000-8161019	Msa0834880:intron	20.0%
!!!	CAACACATAATATAATTTTG+TGG	-	chr5_4:8161185-8161204	None:intergenic	20.0%
!!	ATTGTCCTTAATAAATGTTA+TGG	+	chr5_4:8160611-8160630	Msa0834880:intron	20.0%
!!	CTTTACCATAACATTTATTA+AGG	-	chr5_4:8160619-8160638	None:intergenic	20.0%
!!	GAGAGAATAATAAATAGTTA+AGG	+	chr5_4:8161264-8161283	Msa0834880:intron	20.0%
!!!	TCTATACAACTTAGAAATTT+TGG	-	chr5_4:8161445-8161464	None:intergenic	20.0%
!!	CTAAAAAAAAAATTTACAGG+GGG	-	chr5_4:8161773-8161792	None:intergenic	20.0%
!!!	GAATCTTCATTTTAAAATGA+CGG	-	chr5_4:8161799-8161818	None:intergenic	20.0%
!!!	ACCGAAAATTTTTAAAATTC+TGG	+	chr5_4:8162067-8162086	Msa0834880:intron	20.0%
!!!	AAAAGTTCTGAAAAAAATTC+TGG	+	chr5_4:8162155-8162174	Msa0834880:intron	20.0%
!!	ATTCTCGAAAATAAAAATTC+TGG	+	chr5_4:8162248-8162267	Msa0834880:intron	20.0%
!!	CGAAAATAAAAATGAATTTC+TGG	+	chr5_4:8162301-8162320	Msa0834880:intron	20.0%
!!!	AATGAATTTCTGGAAAATTA+TGG	+	chr5_4:8162311-8162330	Msa0834880:intron	20.0%
!!!	AGTATTTCTCAAAAATTTTC+CGG	+	chr5_4:8162391-8162410	Msa0834880:intron	20.0%
!!	TATAAATACACAAAAATTCC+CGG	-	chr5_4:8162413-8162432	None:intergenic	20.0%
!!	GTATTTATAAACCTAGAATA+AGG	+	chr5_4:8162424-8162443	Msa0834880:intron	20.0%
!!!	TTTTTGTGTATTTATAAACC+GGG	+	chr5_4:8162417-8162436	Msa0834880:intron	20.0%
!!	GTATTTATAAACTGAGAATA+AGG	+	chr5_4:8162567-8162586	Msa0834880:intron	20.0%
!!	CTGACAAAATTTAAAAATTC+TGG	-	chr5_4:8162831-8162850	None:intergenic	20.0%
!!	TTAATAATAATCCAATGGTT+AGG	-	chr5_4:8163403-8163422	None:intergenic	20.0%
!!	AACCATTGGATTATTATTAA+TGG	+	chr5_4:8163403-8163422	Msa0834880:intron	20.0%
!!	AACCATTAATAATAATCCAA+TGG	-	chr5_4:8163408-8163427	None:intergenic	20.0%
!!	GATAATTATTTCATAGAAGA+TGG	+	chr5_4:8163601-8163620	Msa0834880:intron	20.0%
!!!	TTTTTTTGTCAAAAGCAAAA+AGG	-	chr5_4:8164088-8164107	None:intergenic	20.0%
!!	TGACATGAAAAATGATAAAA+TGG	-	chr5_4:8164111-8164130	None:intergenic	20.0%
!!!	TTTTCTCAATATATCTAGAA+TGG	+	chr5_4:8164239-8164258	Msa0834880:intron	20.0%
!!!	TTTCTCAATATATCTAGAAT+GGG	+	chr5_4:8164240-8164259	Msa0834880:intron	20.0%
!!!	AGTTTTACAAAACAAACAAT+GGG	-	chr5_4:8164382-8164401	None:intergenic	20.0%
!!!	AAGTTTTACAAAACAAACAA+TGG	-	chr5_4:8164383-8164402	None:intergenic	20.0%
!!!	ATTGTTTGTTTTGTAAAACT+TGG	+	chr5_4:8164382-8164401	Msa0834880:intron	20.0%
!!!	GCATTACTAAATTTTAATTG+TGG	-	chr5_4:8164690-8164709	None:intergenic	20.0%
!!!	AACTTTGAAAATTTACAGAA+AGG	-	chr5_4:8164800-8164819	None:intergenic	20.0%
!!!	CCTTTTTCTTTTCTAATTAA+CGG	-	chr5_4:8165014-8165033	None:intergenic	20.0%
!!!	TTCAGTACCAATTTTTATAT+TGG	+	chr5_4:8165135-8165154	Msa0834880:intron	20.0%
!!	TCTCAAACCAATATAAAAAT+TGG	-	chr5_4:8165145-8165164	None:intergenic	20.0%
!!	TTATTTGAGAAAAAACTTAC+AGG	+	chr5_4:8165197-8165216	Msa0834880:intron	20.0%
!!	ATAATAATACTAAGATGTCA+TGG	+	chr5_4:8165347-8165366	Msa0834880:three_prime_UTR	20.0%
!!!	GATGTATTTGTTATAGTTTT+TGG	+	chr5_4:8165619-8165638	Msa0834880:three_prime_UTR	20.0%
!	TAACTTTCAAAAGGTAACAA+TGG	-	chr5_4:8158492-8158511	None:intergenic	25.0%
!	CAAGAAGAATAACTTTCAAA+AGG	-	chr5_4:8158501-8158520	None:intergenic	25.0%
!	ACTAAAAATACAGAAAGACA+AGG	+	chr5_4:8158657-8158676	Msa0834880:CDS	25.0%
!	CTAAAAATACAGAAAGACAA+GGG	+	chr5_4:8158658-8158677	Msa0834880:CDS	25.0%
!	GATATATGTCGAAACATAAA+AGG	-	chr5_4:8158952-8158971	None:intergenic	25.0%
!!	TTATTCTAACCTTTTAGACA+TGG	+	chr5_4:8159020-8159039	Msa0834880:intron	25.0%
!!	TATTCTAACCTTTTAGACAT+GGG	+	chr5_4:8159021-8159040	Msa0834880:intron	25.0%
!	CTATATGCATATTGTGATAA+TGG	-	chr5_4:8159066-8159085	None:intergenic	25.0%
!	AAGATGCAATAGTTAATATG+TGG	-	chr5_4:8159266-8159285	None:intergenic	25.0%
!	CTCCATCTATTTCAAATATT+TGG	+	chr5_4:8159353-8159372	Msa0834880:intron	25.0%
!	TTGTAAATCAAATCAACAGA+CGG	+	chr5_4:8159468-8159487	Msa0834880:intron	25.0%
!	AGGAAATTAGGGAAAAAAAT+GGG	+	chr5_4:8159964-8159983	Msa0834880:intron	25.0%
!	AATTTGGCATATTTAGTAGT+AGG	-	chr5_4:8160175-8160194	None:intergenic	25.0%
!	ACTTGATTCTTCATATGATT+TGG	-	chr5_4:8160291-8160310	None:intergenic	25.0%
!	AGTTAGACTTTAAATAGGTT+AGG	+	chr5_4:8160486-8160505	Msa0834880:intron	25.0%
!!!	AAACGACATTCATTTTGAAA+CGG	-	chr5_4:8160686-8160705	None:intergenic	25.0%
!!	TTCAAAATGAATGTCGTTTA+AGG	+	chr5_4:8160687-8160706	Msa0834880:intron	25.0%
!	AAACAAACCAATAGTTGATT+AGG	-	chr5_4:8160783-8160802	None:intergenic	25.0%
!!!	GTGTATATAGTATTGATTGA+AGG	+	chr5_4:8160835-8160854	Msa0834880:intron	25.0%
!!!	TTTTTTATAAGCAAGGAATG+TGG	+	chr5_4:8161090-8161109	Msa0834880:intron	25.0%
!!	CACATAATATAATTTTGTGG+TGG	-	chr5_4:8161182-8161201	None:intergenic	25.0%
!	AAGTTGTATAGAAATACCTT+AGG	+	chr5_4:8161453-8161472	Msa0834880:intron	25.0%
!!	TTGAGAGTTAAAACCTTTTA+AGG	+	chr5_4:8161483-8161502	Msa0834880:intron	25.0%
!!	TGAGAGTTAAAACCTTTTAA+GGG	+	chr5_4:8161484-8161503	Msa0834880:intron	25.0%
!!	GTATTTCTCAAAAATTTTCC+GGG	+	chr5_4:8162392-8162411	Msa0834880:intron	25.0%
!!!	CATATTTTTTCCCTTATTCT+AGG	-	chr5_4:8162438-8162457	None:intergenic	25.0%
!	TATAAATACACAAAAGTTCC+CGG	-	chr5_4:8162556-8162575	None:intergenic	25.0%
!	CGGACAAAATTTAAAAAATC+TGG	-	chr5_4:8162879-8162898	None:intergenic	25.0%
!!	TGAAGAATCTTCATTTTACA+AGG	+	chr5_4:8163158-8163177	Msa0834880:intron	25.0%
!!	TTTTATTATGAGAGATGAGA+GGG	+	chr5_4:8163371-8163390	Msa0834880:intron	25.0%
!	AGATAAAATTTGAACACATG+TGG	+	chr5_4:8163429-8163448	Msa0834880:intron	25.0%
!	AACATGAGGATTTAAAAGAA+GGG	-	chr5_4:8163693-8163712	None:intergenic	25.0%
!	AAACATGAGGATTTAAAAGA+AGG	-	chr5_4:8163694-8163713	None:intergenic	25.0%
!	AGAATCACACAAAAAAAAGT+TGG	-	chr5_4:8163800-8163819	None:intergenic	25.0%
!!!	CTATATACTTTTTCAGATCA+TGG	-	chr5_4:8163885-8163904	None:intergenic	25.0%
!!	TGATCTGAAAAAGTATATAG+AGG	+	chr5_4:8163885-8163904	Msa0834880:intron	25.0%
!!	ATTTTCTTAATTCCTTTCTC+TGG	+	chr5_4:8164271-8164290	Msa0834880:intron	25.0%
!!	TTTTCTTAATTCCTTTCTCT+GGG	+	chr5_4:8164272-8164291	Msa0834880:intron	25.0%
!!	GTTTTACAAAACAAACAATG+GGG	-	chr5_4:8164381-8164400	None:intergenic	25.0%
!!	CTATTTTATATGTTGGAAGA+TGG	+	chr5_4:8164496-8164515	Msa0834880:intron	25.0%
!!!	ATTAAGTTTTTCAACTGTCT+TGG	-	chr5_4:8164770-8164789	None:intergenic	25.0%
!	TTTCTAATTAACGGTACTTA+GGG	-	chr5_4:8165005-8165024	None:intergenic	25.0%
!!	TTTTCTAATTAACGGTACTT+AGG	-	chr5_4:8165006-8165025	None:intergenic	25.0%
!	CCGTTAATTAGAAAAGAAAA+AGG	+	chr5_4:8165011-8165030	Msa0834880:intron	25.0%
!!	TTGGTTTGAGAAATGAATTA+AGG	+	chr5_4:8165154-8165173	Msa0834880:intron	25.0%
!	TCTGCAATAAATAAATAGTG+TGG	-	chr5_4:8165224-8165243	None:intergenic	25.0%
!	TATTTATTGCAGAAAGAAAC+AGG	+	chr5_4:8165231-8165250	Msa0834880:intron	25.0%
!!	GCTTTTTACAAGATCATTTT+CGG	-	chr5_4:8165268-8165287	None:intergenic	25.0%
!	AGTATTATTATTTCATCGAC+CGG	-	chr5_4:8165338-8165357	None:intergenic	25.0%
!	TTAAAGAAAGGAAGATGAAA+TGG	-	chr5_4:8165666-8165685	None:intergenic	25.0%
	TGCTTAACAATTTCAGAGAT+TGG	-	chr5_4:8158118-8158137	None:intergenic	30.0%
!!	CTCTGAAATTGTTAAGCAAA+AGG	+	chr5_4:8158120-8158139	Msa0834880:five_prime_UTR	30.0%
	AATTAGCTGGTTATCTGATT+GGG	+	chr5_4:8158211-8158230	Msa0834880:CDS	30.0%
!!	AGCAAGTATTTTTCAACAAG+AGG	+	chr5_4:8158449-8158468	Msa0834880:CDS	30.0%
	AAGTTATTCTTCTTGTCCTT+TGG	+	chr5_4:8158506-8158525	Msa0834880:CDS	30.0%
!	TTGTCCTTTGGAAACAAATT+TGG	+	chr5_4:8158518-8158537	Msa0834880:CDS	30.0%
!	CTTTCCAAATTTGTTTCCAA+AGG	-	chr5_4:8158525-8158544	None:intergenic	30.0%
	AACTACCTCAAAATCAAGAA+GGG	+	chr5_4:8158607-8158626	Msa0834880:CDS	30.0%
!!!	TTAGAGCTACGTGTTTTTTT+GGG	-	chr5_4:8158905-8158924	None:intergenic	30.0%
!!!	TTTAGAGCTACGTGTTTTTT+TGG	-	chr5_4:8158906-8158925	None:intergenic	30.0%
!!	TATTGTGATAATGGTCCAAA+CGG	-	chr5_4:8159057-8159076	None:intergenic	30.0%
!!!	TTTTGGGACCAAACTTTATT+CGG	+	chr5_4:8159102-8159121	Msa0834880:intron	30.0%
	TACACATACCGAATAAAGTT+TGG	-	chr5_4:8159113-8159132	None:intergenic	30.0%
	TGTAGTGATGAGAATTCATT+TGG	-	chr5_4:8159319-8159338	None:intergenic	30.0%
!	CGCCAAATATTTGAAATAGA+TGG	-	chr5_4:8159358-8159377	None:intergenic	30.0%
!	CACGTTTTTGTCCAAAATTT+TGG	-	chr5_4:8159695-8159714	None:intergenic	30.0%
!	GCAAAAAACTCTTTTGCTTT+TGG	-	chr5_4:8159735-8159754	None:intergenic	30.0%
	TTGACATAACAATCATTGCT+CGG	+	chr5_4:8159833-8159852	Msa0834880:CDS	30.0%
	TGTTCGTTGTAGTAAATTGT+TGG	+	chr5_4:8159933-8159952	Msa0834880:intron	30.0%
	GAGGAAATTAGGGAAAAAAA+TGG	+	chr5_4:8159963-8159982	Msa0834880:intron	30.0%
!!!	TTTTGAAGTATGTCAGGTTT+AGG	-	chr5_4:8160015-8160034	None:intergenic	30.0%
	TTTGACATATTACCCATCAT+AGG	+	chr5_4:8160049-8160068	Msa0834880:intron	30.0%
!	ACTTCATCATGCCTTTAAAA+AGG	-	chr5_4:8160098-8160117	None:intergenic	30.0%
!	ATTACATTTCCTCTAGAGAT+GGG	-	chr5_4:8161050-8161069	None:intergenic	30.0%
!	AATTACATTTCCTCTAGAGA+TGG	-	chr5_4:8161051-8161070	None:intergenic	30.0%
!	ATATAATTTTGTGGTGGCAT+AGG	-	chr5_4:8161176-8161195	None:intergenic	30.0%
	AAACGACATACAATTTGAGA+CGG	+	chr5_4:8161368-8161387	Msa0834880:intron	30.0%
!!	GTCTTAAAGGTTAGTCTATT+GGG	+	chr5_4:8161417-8161436	Msa0834880:intron	30.0%
!!	TCTTAAAGGTTAGTCTATTG+GGG	+	chr5_4:8161418-8161437	Msa0834880:intron	30.0%
!	ATAGAAATACCTTAGGTTGT+CGG	+	chr5_4:8161460-8161479	Msa0834880:intron	30.0%
!!	AAACTATATTCGAGTTGGTT+CGG	-	chr5_4:8161521-8161540	None:intergenic	30.0%
	AAAAGTCGTCTATATTACAG+GGG	-	chr5_4:8161743-8161762	None:intergenic	30.0%
	CAAAAGTCGTCTATATTACA+GGG	-	chr5_4:8161744-8161763	None:intergenic	30.0%
!!!	ATTTTTTATTGGGGTACATG+TGG	+	chr5_4:8161923-8161942	Msa0834880:intron	30.0%
	TGTATCTATAAACTGAGCTT+AGG	+	chr5_4:8162458-8162477	Msa0834880:intron	30.0%
	TTAGTATATATGTCGAGCTT+AGG	-	chr5_4:8162613-8162632	None:intergenic	30.0%
!	GAATCTTCATTTTACAAGGA+CGG	+	chr5_4:8163162-8163181	Msa0834880:intron	30.0%
	CAAAATTCGCCTATATTACA+GGG	+	chr5_4:8163218-8163237	Msa0834880:intron	30.0%
	AAAATTCGCCTATATTACAG+GGG	+	chr5_4:8163219-8163238	Msa0834880:intron	30.0%
!!	GTTTTATTATGAGAGATGAG+AGG	+	chr5_4:8163370-8163389	Msa0834880:intron	30.0%
	ATGGTGAATTAATCTTTACG+TGG	-	chr5_4:8163866-8163885	None:intergenic	30.0%
!!!	ACACCTTCTAATTTTTGAGT+GGG	-	chr5_4:8164049-8164068	None:intergenic	30.0%
	TTCATGTCAAGTCAAAGTTA+AGG	+	chr5_4:8164122-8164141	Msa0834880:intron	30.0%
	TCATGTCAAGTCAAAGTTAA+GGG	+	chr5_4:8164123-8164142	Msa0834880:intron	30.0%
	AGTCAAAGTTAAGGGTAATT+AGG	+	chr5_4:8164131-8164150	Msa0834880:intron	30.0%
	TACTACCAAATTGAATCAGA+AGG	+	chr5_4:8164520-8164539	Msa0834880:intron	30.0%
	TTCTTCCTTCTGATTCAATT+TGG	-	chr5_4:8164528-8164547	None:intergenic	30.0%
!!	TTTTTCAACTGTCTTGGAAA+TGG	-	chr5_4:8164764-8164783	None:intergenic	30.0%
!!!	TCTTTTTTTAAGCTCGAGTT+CGG	-	chr5_4:8164892-8164911	None:intergenic	30.0%
	CATAAGCTCCTAATTATTTG+TGG	+	chr5_4:8165447-8165466	Msa0834880:three_prime_UTR	30.0%
!	CATTCAAGCTTCTTGTATTT+TGG	+	chr5_4:8165498-8165517	Msa0834880:three_prime_UTR	30.0%
!!!	TCTTTGTTTTGTCCTTGATT+TGG	+	chr5_4:8165596-8165615	Msa0834880:three_prime_UTR	30.0%
!!!	CTTTGTTTTGTCCTTGATTT+GGG	+	chr5_4:8165597-8165616	Msa0834880:three_prime_UTR	30.0%
	AACAAATACATCCCAAATCA+AGG	-	chr5_4:8165611-8165630	None:intergenic	30.0%
	CAATTAGCTGGTTATCTGAT+TGG	+	chr5_4:8158210-8158229	Msa0834880:CDS	35.0%
	GTCACTTGACTGATATATGA+AGG	-	chr5_4:8158249-8158268	None:intergenic	35.0%
	CAATGCGAACAAAACTTGTA+TGG	+	chr5_4:8158399-8158418	Msa0834880:CDS	35.0%
	CAACTACCTCAAAATCAAGA+AGG	+	chr5_4:8158606-8158625	Msa0834880:CDS	35.0%
!	AATGACCCTTCTTGATTTTG+AGG	-	chr5_4:8158615-8158634	None:intergenic	35.0%
	TCTCATTCATGGATTCTTCA+AGG	+	chr5_4:8158822-8158841	Msa0834880:intron	35.0%
	CTAATACTCTCAAACGTTCT+TGG	-	chr5_4:8159540-8159559	None:intergenic	35.0%
	TACAAGTCATGGAGTGATTA+TGG	+	chr5_4:8159622-8159641	Msa0834880:CDS	35.0%
!	ATGGAGTGATTATGGTTCTA+AGG	+	chr5_4:8159630-8159649	Msa0834880:CDS	35.0%
	TGCTATTAACAACAGAGAGA+TGG	-	chr5_4:8159786-8159805	None:intergenic	35.0%
	GAGCAATGATTGTTATGTCA+AGG	-	chr5_4:8159834-8159853	None:intergenic	35.0%
	TGACATAACAATCATTGCTC+GGG	+	chr5_4:8159834-8159853	Msa0834880:CDS	35.0%
	GTTGTAGTAAATTGTTGGAG+TGG	+	chr5_4:8159938-8159957	Msa0834880:intron	35.0%
	CTTAAATGTGAGCCTATGAT+GGG	-	chr5_4:8160064-8160083	None:intergenic	35.0%
	AAAAGCCTATTAAGCACATC+AGG	-	chr5_4:8160383-8160402	None:intergenic	35.0%
	GGTCGAGTTAGACTTTAAAT+AGG	+	chr5_4:8160481-8160500	Msa0834880:intron	35.0%
	ACTAATTACATGTCCTCTAG+AGG	-	chr5_4:8160548-8160567	None:intergenic	35.0%
	TGACTAAAACGACACTCATT+TGG	+	chr5_4:8160930-8160949	Msa0834880:intron	35.0%
	ACAGAGGGAGTAAATACTTA+AGG	+	chr5_4:8160955-8160974	Msa0834880:intron	35.0%
	AGGAAAACAGATGTATGCTA+AGG	+	chr5_4:8161395-8161414	Msa0834880:intron	35.0%
	GATGTATGCTAAGGTCTTAA+AGG	+	chr5_4:8161404-8161423	Msa0834880:intron	35.0%
!!	GGTCTTAAAGGTTAGTCTAT+TGG	+	chr5_4:8161416-8161435	Msa0834880:intron	35.0%
!!	CTTAAAGGTTAGTCTATTGG+GGG	+	chr5_4:8161419-8161438	Msa0834880:intron	35.0%
	GTTCATTGTCATCCCTTAAA+AGG	-	chr5_4:8161499-8161518	None:intergenic	35.0%
	GAACCAACTCGAATATAGTT+TGG	+	chr5_4:8161520-8161539	Msa0834880:intron	35.0%
	GTTCCAAACTATATTCGAGT+TGG	-	chr5_4:8161526-8161545	None:intergenic	35.0%
	GACAATTAACTCGTTGAGTT+TGG	+	chr5_4:8161553-8161572	Msa0834880:intron	35.0%
	AACTTGAGCTATGCATAGTT+CGG	+	chr5_4:8161596-8161615	Msa0834880:intron	35.0%
	AAAGTCGTCTATATTACAGG+GGG	-	chr5_4:8161742-8161761	None:intergenic	35.0%
	CCAAAAGTCGTCTATATTAC+AGG	-	chr5_4:8161745-8161764	None:intergenic	35.0%
!	CCTGTAATATAGACGACTTT+TGG	+	chr5_4:8161742-8161761	Msa0834880:intron	35.0%
!!!	TTTTTTTATAGGGGTACACG+TGG	-	chr5_4:8163086-8163105	None:intergenic	35.0%
!	CCTGTAATATAGGCGAATTT+TGG	-	chr5_4:8163220-8163239	None:intergenic	35.0%
	CCAAAATTCGCCTATATTAC+AGG	+	chr5_4:8163217-8163236	Msa0834880:intron	35.0%
	AAATTCGCCTATATTACAGG+GGG	+	chr5_4:8163220-8163239	Msa0834880:intron	35.0%
	TATAGGGTGTATCAAATGAG+AGG	+	chr5_4:8163346-8163365	Msa0834880:intron	35.0%
	AATACACAATCCTCTTTGCA+AGG	-	chr5_4:8163550-8163569	None:intergenic	35.0%
	GGATTTAAAAGAAGGGAAGT+AGG	-	chr5_4:8163686-8163705	None:intergenic	35.0%
	ATTAATCTTTACGTGGCCAA+AGG	-	chr5_4:8163859-8163878	None:intergenic	35.0%
	ACACCCACTCAAAAATTAGA+AGG	+	chr5_4:8164043-8164062	Msa0834880:intron	35.0%
!!	CACACCTTCTAATTTTTGAG+TGG	-	chr5_4:8164050-8164069	None:intergenic	35.0%
	ACAATGAAAATCCCAGAGAA+AGG	-	chr5_4:8164286-8164305	None:intergenic	35.0%
!!	TCTGGGATTTTCATTGTGTT+TGG	+	chr5_4:8164289-8164308	Msa0834880:intron	35.0%
	TTACAAAACAAACAATGGGG+TGG	-	chr5_4:8164378-8164397	None:intergenic	35.0%
	ATCAGAAGGAAGAAAACTGA+TGG	+	chr5_4:8164534-8164553	Msa0834880:intron	35.0%
	GTTAACTAAATAGCCGATGT+GGG	-	chr5_4:8164628-8164647	None:intergenic	35.0%
	TGTTAACTAAATAGCCGATG+TGG	-	chr5_4:8164629-8164648	None:intergenic	35.0%
	CTTGGAAATGGTTATCACTT+TGG	-	chr5_4:8164752-8164771	None:intergenic	35.0%
	TAATTAACGGTACTTAGGGT+TGG	-	chr5_4:8165001-8165020	None:intergenic	35.0%
	TACATGTTCATGTTACGACA+TGG	-	chr5_4:8165313-8165332	None:intergenic	35.0%
!!	GGAGTATTTTCTTACCTCAT+TGG	+	chr5_4:8165368-8165387	Msa0834880:three_prime_UTR	35.0%
	TGGTGTTTGAGTATCAGATT+GGG	+	chr5_4:8165403-8165422	Msa0834880:three_prime_UTR	35.0%
	GAACCACACCACAAATAATT+AGG	-	chr5_4:8165458-8165477	None:intergenic	35.0%
!!!	CAAGCTTCTTGTATTTTGGT+TGG	+	chr5_4:8165502-8165521	Msa0834880:three_prime_UTR	35.0%
!!!	GTATTTTGGTTGGTACTAGT+AGG	+	chr5_4:8165512-8165531	Msa0834880:three_prime_UTR	35.0%
!!!	ACAGCTACTTTTGTGGTTTT+TGG	+	chr5_4:8165561-8165580	Msa0834880:intron	35.0%
	CAAACGCATCATCAATTAGC+TGG	+	chr5_4:8158198-8158217	Msa0834880:CDS	40.0%
	TGGAACAACTTCATGCAAAG+TGG	-	chr5_4:8158574-8158593	None:intergenic	40.0%
	GGTAGTTGTGTTTGTGACAA+TGG	-	chr5_4:8158594-8158613	None:intergenic	40.0%
	TGATCATCAAGACCGTATCA+TGG	+	chr5_4:8158701-8158720	Msa0834880:CDS	40.0%
!	TCTTATTCCTGGCTTGAAGA+AGG	+	chr5_4:8158776-8158795	Msa0834880:CDS	40.0%
!	TGAAGAAGGTATGTTGCTCT+CGG	+	chr5_4:8158790-8158809	Msa0834880:intron	40.0%
	GGATCTCATTGTCTCATTCA+TGG	+	chr5_4:8158811-8158830	Msa0834880:intron	40.0%
	GTTTCGATCCCATGTCTAAA+AGG	-	chr5_4:8159032-8159051	None:intergenic	40.0%
	TGGACAAAAACGTGCTCATA+AGG	+	chr5_4:8159701-8159720	Msa0834880:CDS	40.0%
!!	AACTCTTTTGCTTTTGGCAC+TGG	-	chr5_4:8159729-8159748	None:intergenic	40.0%
	GTAAATTGTTGGAGTGGAAG+AGG	+	chr5_4:8159944-8159963	Msa0834880:intron	40.0%
	TTGGAGTGGAAGAGGAAATT+AGG	+	chr5_4:8159952-8159971	Msa0834880:intron	40.0%
	TGGAGTGGAAGAGGAAATTA+GGG	+	chr5_4:8159953-8159972	Msa0834880:intron	40.0%
	CCTTAAATGTGAGCCTATGA+TGG	-	chr5_4:8160065-8160084	None:intergenic	40.0%
	CCATCATAGGCTCACATTTA+AGG	+	chr5_4:8160062-8160081	Msa0834880:intron	40.0%
!	ATAGGCTCACATTTAAGGTG+TGG	+	chr5_4:8160067-8160086	Msa0834880:intron	40.0%
!	GTGTGGTCTGACCTTTTTAA+AGG	+	chr5_4:8160084-8160103	Msa0834880:intron	40.0%
!!	GTAGGTTTATAGGTGTTGCT+AGG	-	chr5_4:8160157-8160176	None:intergenic	40.0%
!	CCTTGTTTGATAAGAAGGCT+AGG	-	chr5_4:8160460-8160479	None:intergenic	40.0%
!	CCTAGCCTTCTTATCAAACA+AGG	+	chr5_4:8160457-8160476	Msa0834880:intron	40.0%
	AGCCTTCTTATCAAACAAGG+CGG	+	chr5_4:8160460-8160479	Msa0834880:intron	40.0%
!	ATTACATGTCCTCTAGAGGT+GGG	-	chr5_4:8160544-8160563	None:intergenic	40.0%
!	AATTACATGTCCTCTAGAGG+TGG	-	chr5_4:8160545-8160564	None:intergenic	40.0%
	GACACTCATTTGGAAACAGA+GGG	+	chr5_4:8160940-8160959	Msa0834880:intron	40.0%
	GAATGTGGACAAACATCAAG+CGG	+	chr5_4:8161105-8161124	Msa0834880:intron	40.0%
!	AATTTTGTGGTGGCATAGGA+TGG	-	chr5_4:8161172-8161191	None:intergenic	40.0%
!	GACATACAATTTGAGACGGA+GGG	+	chr5_4:8161372-8161391	Msa0834880:intron	40.0%
	TAGCTCAAGTTCAGCTCATT+TGG	-	chr5_4:8161587-8161606	None:intergenic	40.0%
!	GCTTTTACCCCCTGTAATAT+AGG	-	chr5_4:8161732-8161751	None:intergenic	40.0%
	GAGGGTTAAATCCTAACCAT+TGG	+	chr5_4:8163389-8163408	Msa0834880:intron	40.0%
	CACTGACAAATGATACAGTG+AGG	-	chr5_4:8163460-8163479	None:intergenic	40.0%
	GAGTTGTGATGCAAGGAAAA+GGG	-	chr5_4:8163528-8163547	None:intergenic	40.0%
	GCAAAGCTATGAGAAACATG+AGG	-	chr5_4:8163707-8163726	None:intergenic	40.0%
	TGATGCAACAATGTAGCCTT+TGG	+	chr5_4:8163840-8163859	Msa0834880:intron	40.0%
!	ACTGATGGCGTATGAATTCA+CGG	+	chr5_4:8164549-8164568	Msa0834880:intron	40.0%
	ATGCATAGTACTGTCACTCA+CGG	+	chr5_4:8164706-8164725	Msa0834880:intron	40.0%
	CGTAACATGAACATGTAGTC+CGG	+	chr5_4:8165316-8165335	Msa0834880:exon	40.0%
	GTGGTGTTTGAGTATCAGAT+TGG	+	chr5_4:8165402-8165421	Msa0834880:three_prime_UTR	40.0%
	GCTCCTAATTATTTGTGGTG+TGG	+	chr5_4:8165452-8165471	Msa0834880:three_prime_UTR	40.0%
!!	TTTTGGTTGGTACTAGTAGG+AGG	+	chr5_4:8165515-8165534	Msa0834880:intron	40.0%
!!!	AGGTTCAACAGCTACTTTTG+TGG	+	chr5_4:8165554-8165573	Msa0834880:intron	40.0%
	CAGAAAGACAAGGGACTAAG+AGG	+	chr5_4:8158667-8158686	Msa0834880:CDS	45.0%
	TCATCAAGACCGTATCATGG+CGG	+	chr5_4:8158704-8158723	Msa0834880:CDS	45.0%
	TCTTTCTCTCCGCCATGATA+CGG	-	chr5_4:8158716-8158735	None:intergenic	45.0%
	ACTCTAGCTGCTCTTATTCC+TGG	+	chr5_4:8158765-8158784	Msa0834880:CDS	45.0%
	CAACATACCTTCTTCAAGCC+AGG	-	chr5_4:8158786-8158805	None:intergenic	45.0%
	ATGGGATCGAAACTACCGTT+TGG	+	chr5_4:8159039-8159058	Msa0834880:intron	45.0%
	ACGGACAAGACTTCAGTCAT+AGG	+	chr5_4:8159487-8159506	Msa0834880:CDS	45.0%
	CGCAGCTAAGTTACAAGTCA+TGG	+	chr5_4:8159611-8159630	Msa0834880:CDS	45.0%
	TAATGAAGATCTCCTCCACG+TGG	+	chr5_4:8159666-8159685	Msa0834880:CDS	45.0%
!!	AAATTTTGGCATCCACGTGG+AGG	-	chr5_4:8159681-8159700	None:intergenic	45.0%
!!	CCAAAATTTTGGCATCCACG+TGG	-	chr5_4:8159684-8159703	None:intergenic	45.0%
!	CCACGTGGATGCCAAAATTT+TGG	+	chr5_4:8159681-8159700	Msa0834880:CDS	45.0%
	AATAGCAGCGTCCTAGCTAT+TGG	+	chr5_4:8159799-8159818	Msa0834880:CDS	45.0%
	ATAGCAGCGTCCTAGCTATT+GGG	+	chr5_4:8159800-8159819	Msa0834880:CDS	45.0%
	GGATAGAATCCCCAATAGCT+AGG	-	chr5_4:8159813-8159832	None:intergenic	45.0%
!!	GGGAAAAAAATGGGCTAGAC+CGG	+	chr5_4:8159973-8159992	Msa0834880:intron	45.0%
!!	GGAAAAAAATGGGCTAGACC+GGG	+	chr5_4:8159974-8159993	Msa0834880:intron	45.0%
	GTCGACCTGATGTGCTTAAT+AGG	+	chr5_4:8160375-8160394	Msa0834880:intron	45.0%
!!	GACCGCCTTGTTTGATAAGA+AGG	-	chr5_4:8160465-8160484	None:intergenic	45.0%
	CGACACTCATTTGGAAACAG+AGG	+	chr5_4:8160939-8160958	Msa0834880:intron	45.0%
	TTGTATTGTAGGCCCTTGTC+TGG	+	chr5_4:8161011-8161030	Msa0834880:intron	45.0%
	CTAGGTCAAGTACCAGACAA+GGG	-	chr5_4:8161026-8161045	None:intergenic	45.0%
	ACTAGGTCAAGTACCAGACA+AGG	-	chr5_4:8161027-8161046	None:intergenic	45.0%
!	TTTCCTCTAGAGATGGGACT+AGG	-	chr5_4:8161044-8161063	None:intergenic	45.0%
	GTATCATCGACATCCCAACT+AGG	+	chr5_4:8161127-8161146	Msa0834880:intron	45.0%
!	CGACATACAATTTGAGACGG+AGG	+	chr5_4:8161371-8161390	Msa0834880:intron	45.0%
!	ATACAATTTGAGACGGAGGG+AGG	+	chr5_4:8161375-8161394	Msa0834880:intron	45.0%
	AACTCTCAACCGACAACCTA+AGG	-	chr5_4:8161472-8161491	None:intergenic	45.0%
!	TATGCATAGTTCGGCTCGTT+TGG	+	chr5_4:8161605-8161624	Msa0834880:intron	45.0%
	ATCATTTGTCAGTGACTCCC+TGG	+	chr5_4:8163466-8163485	Msa0834880:intron	45.0%
	ATGCAAGGAAAAGGGAGAAC+TGG	-	chr5_4:8163520-8163539	None:intergenic	45.0%
	GGAGTTGTGATGCAAGGAAA+AGG	-	chr5_4:8163529-8163548	None:intergenic	45.0%
	TTGCAAGGAGTTGTGATGCA+AGG	-	chr5_4:8163535-8163554	None:intergenic	45.0%
	CATCACAACTCCTTGCAAAG+AGG	+	chr5_4:8163537-8163556	Msa0834880:intron	45.0%
	AGAAGGGAAGTAGGATCTCA+TGG	-	chr5_4:8163677-8163696	None:intergenic	45.0%
	AGTAGCTACTAGTCCCACAT+CGG	+	chr5_4:8164612-8164631	Msa0834880:intron	45.0%
	TTAGGTTCAACTCGGTTGGA+GGG	-	chr5_4:8164833-8164852	None:intergenic	45.0%
	AGTTGACGAACAGCTCGATT+CGG	-	chr5_4:8164860-8164879	None:intergenic	45.0%
!!	CGACTCGGTAAGAATTAGCT+CGG	-	chr5_4:8164944-8164963	None:intergenic	45.0%
	CACTGCTATCTATGCCAATG+AGG	-	chr5_4:8165385-8165404	None:intergenic	45.0%
	CTCATTGGCATAGATAGCAG+TGG	+	chr5_4:8165383-8165402	Msa0834880:three_prime_UTR	45.0%
!!!	TTATATAAATATTTTTTGTT+CGG	+	chr5_4:8158867-8158886	Msa0834880:intron	5.0%
!!	ATATATACATATATATATAT+AGG	+	chr5_4:8161701-8161720	Msa0834880:intron	5.0%
!!	TATATACATATATATATATA+GGG	+	chr5_4:8161702-8161721	Msa0834880:intron	5.0%
!!!	ATTATTTTTATTTTTTATTG+GGG	+	chr5_4:8161914-8161933	Msa0834880:intron	5.0%
!!	TAAAAAATATTAAAAAATTG+TGG	+	chr5_4:8161963-8161982	Msa0834880:intron	5.0%
!!	AAAAAAATATTAAAAAATTC+TGG	+	chr5_4:8162011-8162030	Msa0834880:intron	5.0%
!!!	ATTTTTTTTAGTATTTTTTT+CGG	+	chr5_4:8162509-8162528	Msa0834880:intron	5.0%
!!	AAAAAAATATTAAAAAATTC+TGG	-	chr5_4:8162011-8162030	None:intergenic	5.0%
!!	AAAAAAATATTTAAAAATTC+TGG	-	chr5_4:8162993-8163012	None:intergenic	5.0%
!!!	ATTTTTTTTTTATAAAATTC+TGG	-	chr5_4:8163035-8163054	None:intergenic	5.0%
!!!	TATTTTTTATTTTTTTATAG+GGG	-	chr5_4:8163095-8163114	None:intergenic	5.0%
!!	TATATATATATATATATACA+TGG	-	chr5_4:8161690-8161709	None:intergenic	5.0%
!!	ATTTATATTAAAAAGATTAA+CGG	+	chr5_4:8163759-8163778	Msa0834880:intron	5.0%
!!	ATATATATAGATATATATAT+AGG	+	chr5_4:8164007-8164026	Msa0834880:intron	5.0%
!!	TATATATAGATATATATATA+GGG	+	chr5_4:8164008-8164027	Msa0834880:intron	5.0%
!!!	TTTTTTTTTTTTTTTTAAAC+AGG	+	chr5_4:8164318-8164337	Msa0834880:intron	5.0%
!!	AAATAAAATATATTAAAGAA+AGG	-	chr5_4:8165678-8165697	None:intergenic	5.0%
!!!	TCTTTAATATATTTTATTTT+TGG	+	chr5_4:8165679-8165698	Msa0834880:three_prime_UTR	5.0%
	TAGCAGCGTCCTAGCTATTG+GGG	+	chr5_4:8159801-8159820	Msa0834880:CDS	50.0%
	TGACCTAGTCCCATCTCTAG+AGG	+	chr5_4:8161038-8161057	Msa0834880:intron	50.0%
	CATCGACATCCCAACTAGGT+TGG	+	chr5_4:8161131-8161150	Msa0834880:intron	50.0%
	TTTGTGGTGGCATAGGATGG+AGG	-	chr5_4:8161169-8161188	None:intergenic	50.0%
!!	GGAGATTCTGCTGACTCAAC+TGG	-	chr5_4:8161841-8161860	None:intergenic	50.0%
	AGTCAGCAGAATCTCCTACG+TGG	+	chr5_4:8161845-8161864	Msa0834880:intron	50.0%
!!	ACGGAATCTGCTGACTCAAC+TGG	+	chr5_4:8163120-8163139	Msa0834880:intron	50.0%
!!	TGCTGACTCAACTGGCTCAT+GGG	+	chr5_4:8163128-8163147	Msa0834880:intron	50.0%
	ACCTGAAACGAGAGAAGCCA+GGG	-	chr5_4:8163486-8163505	None:intergenic	50.0%
	AACCTGAAACGAGAGAAGCC+AGG	-	chr5_4:8163487-8163506	None:intergenic	50.0%
	GTTAGGTTCAACTCGGTTGG+AGG	-	chr5_4:8164834-8164853	None:intergenic	50.0%
	CTCGTTAGGTTCAACTCGGT+TGG	-	chr5_4:8164837-8164856	None:intergenic	50.0%
!	TCGGCTCGTTAGGTTCAACT+CGG	-	chr5_4:8164841-8164860	None:intergenic	50.0%
!!	GAGGTCTGCGCTTTTGTTTG+AGG	+	chr5_4:8165534-8165553	Msa0834880:intron	50.0%
	AGACCGGGTCGAACTTTGCA+AGG	+	chr5_4:8159989-8160008	Msa0834880:intron	55.0%
	AGGCCTTGCAAAGTTCGACC+CGG	-	chr5_4:8159995-8160014	None:intergenic	55.0%
	GTTAGGTGCCAAGCCCTTGT+TGG	+	chr5_4:8160503-8160522	Msa0834880:intron	55.0%
	CAGGTCAAGCCGTCCAACAA+GGG	-	chr5_4:8160519-8160538	None:intergenic	55.0%
!!	CATAGGATGGAGGTGTCTCG+GGG	-	chr5_4:8161159-8161178	None:intergenic	55.0%
!!	GCATAGGATGGAGGTGTCTC+GGG	-	chr5_4:8161160-8161179	None:intergenic	55.0%
!!	GGCATAGGATGGAGGTGTCT+CGG	-	chr5_4:8161161-8161180	None:intergenic	55.0%
!!	TCTGCTGACTCAACTGGCTC+AGG	-	chr5_4:8163126-8163145	None:intergenic	55.0%
!!	CTGCTGACTCAACTGGCTCA+TGG	+	chr5_4:8163127-8163146	Msa0834880:intron	55.0%
!	GCTGACTCAACTGGCTCATG+GGG	+	chr5_4:8163129-8163148	Msa0834880:intron	55.0%
	TCCCTGGCTTCTCTCGTTTC+AGG	+	chr5_4:8163482-8163501	Msa0834880:intron	55.0%
!!	ACAGCTCGATTCGGCTCGTT+AGG	-	chr5_4:8164851-8164870	None:intergenic	55.0%
	GAACTCGTCTGAGCTCGACT+CGG	-	chr5_4:8164959-8164978	None:intergenic	55.0%
	GGTGCCAAGCCCTTGTTGGA+CGG	+	chr5_4:8160507-8160526	Msa0834880:intron	60.0%
	CAAGCCGTCCAACAAGGGCT+TGG	-	chr5_4:8160514-8160533	None:intergenic	60.0%
	CCAGGTCAAGCCGTCCAACA+AGG	-	chr5_4:8160520-8160539	None:intergenic	60.0%
	CCTTGTTGGACGGCTTGACC+TGG	+	chr5_4:8160517-8160536	Msa0834880:intron	60.0%
	TGACCTGGTCCCACCTCTAG+AGG	+	chr5_4:8160532-8160551	Msa0834880:intron	60.0%
!	TGTCCTCTAGAGGTGGGACC+AGG	-	chr5_4:8160538-8160557	None:intergenic	60.0%
!	CTCGGGGTGCCAACCTAGTT+GGG	-	chr5_4:8161143-8161162	None:intergenic	60.0%
!	TCTCGGGGTGCCAACCTAGT+TGG	-	chr5_4:8161144-8161163	None:intergenic	60.0%
!	GCTGACTCAACTGGCTCAGG+AGG	-	chr5_4:8161832-8161851	None:intergenic	60.0%
	GCTGACGTAGCGTGCCACGT+AGG	-	chr5_4:8161862-8161881	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_4	gene	8158076	8165709	8158076	ID=Msa0834880;Name=Msa0834880
chr5_4	mRNA	8158076	8165709	8158076	ID=Msa0834880-mRNA-1;Parent=Msa0834880;Name=Msa0834880-mRNA-1;_AED=0.08;_eAED=0.08;_QI=100\|1\|1\|1\|0.75\|0.6\|5\|338\|314
chr5_4	exon	8158076	8158232	8158076	ID=Msa0834880-mRNA-1:exon:3619;Parent=Msa0834880-mRNA-1
chr5_4	exon	8158357	8158797	8158357	ID=Msa0834880-mRNA-1:exon:3620;Parent=Msa0834880-mRNA-1
chr5_4	exon	8159487	8159855	8159487	ID=Msa0834880-mRNA-1:exon:3621;Parent=Msa0834880-mRNA-1
chr5_4	exon	8165243	8165532	8165243	ID=Msa0834880-mRNA-1:exon:3622;Parent=Msa0834880-mRNA-1
chr5_4	exon	8165584	8165709	8165584	ID=Msa0834880-mRNA-1:exon:3623;Parent=Msa0834880-mRNA-1
chr5_4	five_prime_UTR	8158076	8158175	8158076	ID=Msa0834880-mRNA-1:five_prime_utr;Parent=Msa0834880-mRNA-1
chr5_4	CDS	8158176	8158232	8158176	ID=Msa0834880-mRNA-1:cds;Parent=Msa0834880-mRNA-1
chr5_4	CDS	8158357	8158797	8158357	ID=Msa0834880-mRNA-1:cds;Parent=Msa0834880-mRNA-1
chr5_4	CDS	8159487	8159855	8159487	ID=Msa0834880-mRNA-1:cds;Parent=Msa0834880-mRNA-1
chr5_4	CDS	8165243	8165320	8165243	ID=Msa0834880-mRNA-1:cds;Parent=Msa0834880-mRNA-1
chr5_4	three_prime_UTR	8165321	8165532	8165321	ID=Msa0834880-mRNA-1:three_prime_utr;Parent=Msa0834880-mRNA-1
chr5_4	three_prime_UTR	8165584	8165709	8165584	ID=Msa0834880-mRNA-1:three_prime_utr;Parent=Msa0834880-mRNA-1

Gene Sequence

>Msa0834880

ATGGAAAAATTAAACACTTCTTCAAACGCATCATCAATTAGCTGGTTATCTGATTGGCTATTTGAAGAAAATGAAATAGAGGGTTGTAATTTGTTTCAACAATGCGAACAAAACTTGTATGGTGAAGAAGAGTTTCTTTCACATGACATAGCAAGTATTTTTCAACAAGAGGAAAATTTGCAACATCAACCATTGTTACCTTTTGAAAGTTATTCTTCTTGTCCTTTGGAAACAAATTTGGAAAGAGACAACAAGAAGTTGAAAACGAACACCACTTTGCATGAAGTTGTTCCATTGTCACAAACACAACTACCTCAAAATCAAGAAGGGTCATTGCAAAAGCAAAACGTTGTTGAAACTAAAAATACAGAAAGACAAGGGACTAAGAGGTCTGTTGCTTATGATCATCAAGACCGTATCATGGCGGAGAGAAAGAGAAGAGAAAAACTCAGTCAGTGCTTGATTACTCTAGCTGCTCTTATTCCTGGCTTGAAGAAGACGGACAAGACTTCAGTCATAGGAGATGCTATCAAGCATGTGAAAGAGCTCCAAGAACGTTTGAGAGTATTAGAAGAACAGAACAAGAATAGTCTTATTGAATCTGTAGTGACGCTTAACAAATCGCAGCTAAGTTACAAGTCATGGAGTGATTATGGTTCTAAGGCTGCTAGTTCTATTAATGAAGATCTCCTCCACGTGGATGCCAAAATTTTGGACAAAAACGTGCTCATAAGGATCCAGTGCCAAAAGCAAAAGAGTTTTTTGCTTAATAAATTGGTTGAGATTCAAAAGCTCCATCTCTCTGTTGTTAATAGCAGCGTCCTAGCTATTGGGGATTCTATCCTTGACATAACAATCATTGCTCGGAAAGAAACAGGATACAACTTGACCGAAAATGATCTTGTAAAAAGCGTACGCGCTGCTGTATTGAGATCCATGTCGTAA

Protein sequence

>Msa0834880

MEKLNTSSNASSISWLSDWLFEENEIEGCNLFQQCEQNLYGEEEFLSHDIASIFQQEENLQHQPLLPFESYSSCPLETNLERDNKKLKTNTTLHEVVPLSQTQLPQNQEGSLQKQNVVETKNTERQGTKRSVAYDHQDRIMAERKRREKLSQCLITLAALIPGLKKTDKTSVIGDAIKHVKELQERLRVLEEQNKNSLIESVVTLNKSQLSYKSWSDYGSKAASSINEDLLHVDAKILDKNVLIRIQCQKQKSFLLNKLVEIQKLHLSVVNSSVLAIGDSILDITIIARKETGYNLTENDLVKSVRAAVLRSMS*