Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754660 | XP_003611496.1 | 70.382 | 314 | 38 | 2 | 1 | 266 | 1 | 307 | 1.11e-135 | 395 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754660 | sp|Q9T072|BH025_ARATH | 52.041 | 98 | 47 | 0 | 113 | 210 | 127 | 224 | 1.14e-22 | 98.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754660 | G7K128 | 70.382 | 314 | 38 | 2 | 1 | 266 | 1 | 307 | 5.31e-136 | 395 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0754660 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0647130 | Msa0754660 | 0.834390 | 3.081402e-56 | -8.615850e-47 |
| Msa0691050 | Msa0754660 | 0.802917 | 4.468931e-49 | -8.615850e-47 |
| Msa0713640 | Msa0754660 | 0.867091 | 1.766131e-65 | -8.615850e-47 |
| Msa0754660 | Msa0797360 | 0.956882 | 1.029047e-114 | -8.615850e-47 |
| Msa0754660 | Msa0834880 | 0.859785 | 3.251406e-63 | -8.615850e-47 |
| Msa0754660 | Msa0891040 | 0.810966 | 8.863452e-51 | -8.615850e-47 |
| Msa0754660 | Msa0908050 | 0.802408 | 5.690795e-49 | -8.615850e-47 |
| Msa0754660 | Msa0948290 | 0.809957 | 1.463833e-50 | -8.615850e-47 |
| Msa0754660 | Msa0990350 | 0.802217 | 6.231265e-49 | -8.615850e-47 |
| Msa0754660 | Msa0990960 | 0.803209 | 3.888475e-49 | -8.615850e-47 |
| Msa0754660 | Msa1082500 | 0.800904 | 1.157965e-48 | -8.615850e-47 |
| Msa0754660 | Msa1084260 | 0.800253 | 1.571953e-48 | -8.615850e-47 |
| Msa0754660 | Msa1199830 | -0.800613 | 1.327379e-48 | -8.615850e-47 |
| Msa0754660 | Msa1267610 | 0.804014 | 2.647486e-49 | -8.615850e-47 |
| Msa0754660 | Msa1270610 | 0.804755 | 1.854653e-49 | -8.615850e-47 |
| Msa0123100 | Msa0754660 | 0.804197 | 2.424724e-49 | -8.615850e-47 |
| Msa0142200 | Msa0754660 | 0.807192 | 5.699022e-50 | -8.615850e-47 |
| Msa0160010 | Msa0754660 | 0.808931 | 2.429646e-50 | -8.615850e-47 |
| Msa0227470 | Msa0754660 | 0.820869 | 5.461735e-53 | -8.615850e-47 |
| Msa0376590 | Msa0754660 | 0.806328 | 8.675101e-50 | -8.615850e-47 |
| Msa0448550 | Msa0754660 | -0.801349 | 9.391913e-49 | -8.615850e-47 |
| Msa0452920 | Msa0754660 | 0.808273 | 3.359270e-50 | -8.615850e-47 |
| Msa0243890 | Msa0754660 | 0.801630 | 8.225660e-49 | -8.615850e-47 |
| Msa0260820 | Msa0754660 | -0.800996 | 1.108851e-48 | -8.615850e-47 |
| Msa0266000 | Msa0754660 | -0.806802 | 6.892243e-50 | -8.615850e-47 |
| Msa0272730 | Msa0754660 | 0.808405 | 3.148077e-50 | -8.615850e-47 |
| Msa0356890 | Msa0754660 | -0.803153 | 3.994184e-49 | -8.615850e-47 |
| Msa0483650 | Msa0754660 | 0.800812 | 1.208854e-48 | -8.615850e-47 |
| Msa0503060 | Msa0754660 | 0.800346 | 1.504777e-48 | -8.615850e-47 |
| Msa0572420 | Msa0754660 | 0.804666 | 1.935834e-49 | -8.615850e-47 |
| Msa0572480 | Msa0754660 | 0.801735 | 7.825232e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754660 | MtrunA17_Chr5g0400621 | 57.186 | 334 | 74 | 4 | 1 | 266 | 1 | 333 | 2.66e-94 | 281 |
| Msa0754660 | MtrunA17_Chr5g0400641 | 83.168 | 101 | 17 | 0 | 141 | 241 | 1 | 101 | 9.04e-51 | 164 |
| Msa0754660 | MtrunA17_Chr2g0307131 | 36.678 | 289 | 126 | 12 | 1 | 240 | 1 | 281 | 2.14e-31 | 119 |
| Msa0754660 | MtrunA17_Chr6g0468491 | 36.250 | 240 | 115 | 6 | 36 | 240 | 3 | 239 | 5.95e-27 | 106 |
| Msa0754660 | MtrunA17_Chr6g0468461 | 37.805 | 246 | 106 | 9 | 1 | 205 | 1 | 240 | 1.19e-26 | 106 |
| Msa0754660 | MtrunA17_Chr5g0400661 | 54.255 | 94 | 43 | 0 | 109 | 202 | 120 | 213 | 2.91e-25 | 102 |
| Msa0754660 | MtrunA17_Chr4g0054581 | 57.843 | 102 | 38 | 2 | 106 | 207 | 171 | 267 | 3.70e-25 | 102 |
| Msa0754660 | MtrunA17_Chr4g0033281 | 32.938 | 337 | 143 | 17 | 1 | 266 | 1 | 325 | 7.00e-25 | 101 |
| Msa0754660 | MtrunA17_Chr4g0049331 | 46.667 | 120 | 58 | 3 | 127 | 241 | 120 | 238 | 2.07e-24 | 99.4 |
| Msa0754660 | MtrunA17_Chr2g0280161 | 37.853 | 177 | 93 | 5 | 65 | 240 | 120 | 280 | 1.54e-23 | 97.8 |
| Msa0754660 | MtrunA17_Chr2g0307141 | 50.926 | 108 | 53 | 0 | 133 | 240 | 178 | 285 | 2.66e-23 | 97.4 |
| Msa0754660 | MtrunA17_Chr7g0225901 | 37.321 | 209 | 103 | 5 | 33 | 240 | 9 | 190 | 2.78e-23 | 95.5 |
| Msa0754660 | MtrunA17_Chr4g0054571 | 42.771 | 166 | 63 | 6 | 76 | 211 | 59 | 222 | 1.75e-22 | 94.7 |
| Msa0754660 | MtrunA17_Chr4g0054621 | 37.295 | 244 | 82 | 13 | 4 | 197 | 9 | 231 | 2.96e-22 | 94.4 |
| Msa0754660 | MtrunA17_Chr4g0033291 | 35.859 | 198 | 90 | 9 | 25 | 194 | 23 | 211 | 6.62e-21 | 90.1 |
| Msa0754660 | MtrunA17_Chr4g0054561 | 55.128 | 78 | 32 | 1 | 133 | 210 | 153 | 227 | 1.87e-20 | 89.0 |
| Msa0754660 | MtrunA17_Chr5g0400671 | 40.741 | 135 | 67 | 5 | 65 | 193 | 82 | 209 | 2.37e-20 | 88.6 |
| Msa0754660 | MtrunA17_Chr4g0033391 | 34.272 | 213 | 113 | 9 | 1 | 195 | 1 | 204 | 3.28e-20 | 88.2 |
| Msa0754660 | MtrunA17_Chr4g0054551 | 54.054 | 74 | 34 | 0 | 137 | 210 | 154 | 227 | 6.27e-20 | 87.4 |
| Msa0754660 | MtrunA17_Chr2g0333641 | 42.276 | 123 | 60 | 3 | 96 | 210 | 89 | 208 | 1.22e-18 | 83.6 |
| Msa0754660 | MtrunA17_Chr2g0333621 | 44.340 | 106 | 53 | 2 | 96 | 195 | 90 | 195 | 2.39e-17 | 80.1 |
| Msa0754660 | MtrunA17_Chr2g0333611 | 49.333 | 75 | 36 | 1 | 137 | 209 | 44 | 118 | 8.58e-17 | 77.0 |
| Msa0754660 | MtrunA17_Chr4g0002801 | 38.760 | 129 | 72 | 3 | 119 | 240 | 132 | 260 | 1.77e-16 | 77.8 |
| Msa0754660 | MtrunA17_Chr8g0336681 | 41.964 | 112 | 56 | 2 | 137 | 240 | 155 | 265 | 8.54e-16 | 76.3 |
| Msa0754660 | MtrunA17_Chr7g0249811 | 40.385 | 104 | 53 | 1 | 137 | 240 | 164 | 258 | 3.78e-15 | 73.9 |
| Msa0754660 | MtrunA17_Chr4g0002781 | 39.815 | 108 | 58 | 2 | 138 | 240 | 174 | 279 | 4.98e-15 | 73.9 |
| Msa0754660 | MtrunA17_Chr2g0333541 | 42.202 | 109 | 60 | 1 | 135 | 240 | 91 | 199 | 9.91e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0754660 | AT4G37850.2 | 52.041 | 98 | 47 | 0 | 113 | 210 | 127 | 224 | 1.16e-23 | 98.2 |
| Msa0754660 | AT4G37850.1 | 52.041 | 98 | 47 | 0 | 113 | 210 | 127 | 224 | 1.16e-23 | 98.2 |
| Msa0754660 | AT2G22750.4 | 49.074 | 108 | 53 | 1 | 105 | 210 | 119 | 226 | 2.60e-20 | 89.0 |
| Msa0754660 | AT2G22750.5 | 49.074 | 108 | 53 | 1 | 105 | 210 | 115 | 222 | 2.75e-20 | 89.0 |
| Msa0754660 | AT2G22750.3 | 49.074 | 108 | 53 | 1 | 105 | 210 | 119 | 226 | 2.76e-20 | 89.0 |
| Msa0754660 | AT2G22750.2 | 49.074 | 108 | 53 | 1 | 105 | 210 | 91 | 198 | 2.98e-20 | 88.6 |
| Msa0754660 | AT2G22750.1 | 49.074 | 108 | 53 | 1 | 105 | 210 | 91 | 198 | 3.06e-20 | 88.6 |
| Msa0754660 | AT2G22760.2 | 41.284 | 109 | 58 | 3 | 132 | 237 | 116 | 221 | 1.71e-16 | 77.8 |
| Msa0754660 | AT2G22770.1 | 50.000 | 76 | 36 | 1 | 137 | 210 | 131 | 206 | 1.83e-16 | 78.2 |
| Msa0754660 | AT2G22760.1 | 41.284 | 109 | 58 | 3 | 132 | 237 | 116 | 221 | 2.02e-16 | 77.8 |
| Msa0754660 | AT2G46510.1 | 37.975 | 79 | 48 | 1 | 116 | 193 | 372 | 450 | 6.38e-12 | 65.9 |
Find 48 sgRNAs with CRISPR-Local
Find 423 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCAAGCTTCTTGTATTT+TGG | 0.138695 | 5_2:-8354364 | Msa0754660:three_prime_UTR |
| CATAATATCAATAGTTATTA+TGG | 0.146036 | 5_2:-8361590 | Msa0754660:exon |
| TTGTCCTTTGGAAACAAATT+TGG | 0.164005 | 5_2:-8361229 | Msa0754660:CDS |
| CCACGTGGATGCCAAAATTT+TGG | 0.169781 | 5_2:-8359349 | Msa0754660:CDS |
| CTAATACTCTCAAACGTTCT+TGG | 0.224167 | 5_2:+8359493 | None:intergenic |
| ACTCTAGCTGCTCTTATTCC+TGG | 0.272370 | 5_2:-8360982 | Msa0754660:CDS |
| GAACCACACCACAAATAATT+AGG | 0.315099 | 5_2:+8354407 | None:intergenic |
| CAATTAGCTGGTTATCTGAT+TGG | 0.321783 | 5_2:-8361537 | Msa0754660:CDS |
| TGCTTAACAATTTCAGAGAT+TGG | 0.328743 | 5_2:+8361632 | None:intergenic |
| TACAAGTCATGGAGTGAATA+TGG | 0.346393 | 5_2:-8359408 | Msa0754660:CDS |
| CATAAGCTCCTAATTATTTG+TGG | 0.383716 | 5_2:-8354415 | Msa0754660:three_prime_UTR |
| ATGGAGTGAATATGGTTCTA+AGG | 0.389690 | 5_2:-8359400 | Msa0754660:CDS |
| AAGTTATTATTCTTGTCCTT+TGG | 0.396571 | 5_2:-8361241 | Msa0754660:CDS |
| TATTTATTGCAGAAAGAAAC+AGG | 0.398821 | 5_2:-8354631 | Msa0754660:intron |
| TTAAAGAAAGGAAGATGAAA+TGG | 0.411223 | 5_2:+8354250 | None:intergenic |
| AATTAGCTGGTTATCTGATT+GGG | 0.417900 | 5_2:-8361536 | Msa0754660:intron |
| CTCTGAAATTGTTAAGCAAA+AGG | 0.444951 | 5_2:-8361627 | Msa0754660:five_prime_UTR |
| ATTTGAAGAAAATGAAATAG+AGG | 0.453578 | 5_2:-8361388 | Msa0754660:CDS |
| CGCAGCTAAGTTACAAGTCA+TGG | 0.456135 | 5_2:-8359419 | Msa0754660:CDS |
| CTTTCCAAATTTGTTTCCAA+AGG | 0.463702 | 5_2:+8361225 | None:intergenic |
| CAAACGCATCATCAATTAGC+TGG | 0.468053 | 5_2:-8361549 | Msa0754660:CDS |
| AACAAATACATCCCAAATCA+AGG | 0.480151 | 5_2:+8354305 | None:intergenic |
| GTGGTGTTTGAGTATCAGAT+TGG | 0.490552 | 5_2:-8354460 | Msa0754660:three_prime_UTR |
| CAATGCGAACAAAACTTGTA+TGG | 0.490627 | 5_2:-8361348 | Msa0754660:CDS |
| TCTTTCTCTCCGCCATGATA+CGG | 0.492627 | 5_2:+8361034 | None:intergenic |
| TCTTATTCCTGGCTTGAAGA+AGG | 0.494711 | 5_2:-8360971 | Msa0754660:intron |
| AGTATTATTATTTCATCGAC+CGG | 0.498715 | 5_2:+8354527 | None:intergenic |
| CAAGAATAATAACTTTCAAA+AGG | 0.505322 | 5_2:+8361249 | None:intergenic |
| ACGGACAAGACTTCAGTCAT+AGG | 0.509641 | 5_2:-8359543 | Msa0754660:CDS |
| CAACTACCTCAAAATCAAGA+AGG | 0.526009 | 5_2:-8361141 | Msa0754660:CDS |
| CAACATACCTTCTTCAAGCC+AGG | 0.529759 | 5_2:+8360964 | None:intergenic |
| CACAAAGACAAGAGACTAAG+AGG | 0.531183 | 5_2:-8361080 | Msa0754660:CDS |
| AAATAAAATATATTAAAGAA+AGG | 0.536678 | 5_2:+8354238 | None:intergenic |
| GGTAGTTGTGTTTGTGACAA+TGG | 0.540621 | 5_2:+8361156 | None:intergenic |
| TGGTGTTTGAGTATCAGATT+GGG | 0.541526 | 5_2:-8354459 | Msa0754660:three_prime_UTR |
| TGATCATCAAGACCGTATCA+TGG | 0.542668 | 5_2:-8361046 | Msa0754660:CDS |
| GCTCCTAATTATTTGTGGTG+TGG | 0.551267 | 5_2:-8354410 | Msa0754660:three_prime_UTR |
| ATAATAATACTAAGATGTCA+TGG | 0.553313 | 5_2:-8354515 | Msa0754660:three_prime_UTR |
| TAACTTTCAAAAGGTAACAA+TGG | 0.569159 | 5_2:+8361258 | None:intergenic |
| TTTGAAGAAAATGAAATAGA+GGG | 0.571396 | 5_2:-8361387 | Msa0754660:CDS |
| CGTAACATGAACATGTAGTC+CGG | 0.586244 | 5_2:-8354546 | Msa0754660:exon |
| AACTACCTCAAAATCAAGAA+GGG | 0.608663 | 5_2:-8361140 | Msa0754660:CDS |
| TGGAACAACTTCATGCAAAG+TGG | 0.630460 | 5_2:+8361176 | None:intergenic |
| TACATGTTCATGTTACGACA+TGG | 0.637585 | 5_2:+8354552 | None:intergenic |
| CACTGCTATCTATGCCAATG+AGG | 0.645769 | 5_2:+8354480 | None:intergenic |
| CTCATTGGCATAGATAGCAG+TGG | 0.655973 | 5_2:-8354479 | Msa0754660:three_prime_UTR |
| TAATGAAGATCTCCTCCACG+TGG | 0.724761 | 5_2:-8359364 | Msa0754660:CDS |
| TCATCAAGACCGTATCATGG+CGG | 0.756942 | 5_2:-8361043 | Msa0754660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATATATATATATAT+AGG | - | chr5_2:8356746-8356765 | Msa0754660:intron | 0.0% |
| !! | AATATATATATATATATATA+GGG | - | chr5_2:8356747-8356766 | Msa0754660:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr5_2:8358028-8358047 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr5_2:8358028-8358047 | Msa0754660:intron | 0.0% |
| !! | TTATAAAATATATATATATA+GGG | + | chr5_2:8358237-8358256 | None:intergenic | 0.0% |
| !! | ATTATAAAATATATATATAT+AGG | + | chr5_2:8358238-8358257 | None:intergenic | 0.0% |
| !! | AACTATATAAATTTAATCTA+AGG | + | chr5_2:8355370-8355389 | None:intergenic | 10.0% |
| !! | AATTTATATAGTTATTTAAC+CGG | - | chr5_2:8355377-8355396 | Msa0754660:intron | 10.0% |
| !!! | TTATTAATTTTTGCATTTTT+GGG | - | chr5_2:8355954-8355973 | Msa0754660:intron | 10.0% |
| !!! | AGAAATAATTTTAATATGTT+TGG | - | chr5_2:8356000-8356019 | Msa0754660:intron | 10.0% |
| !! | TAAAGTCTATTTAATTAAAT+AGG | + | chr5_2:8358754-8358773 | None:intergenic | 10.0% |
| !!! | TATTTTGAAACAATTTTTTT+TGG | - | chr5_2:8359239-8359258 | Msa0754660:intron | 10.0% |
| !!! | TTTTTTCTCAAATAATTAAA+GGG | + | chr5_2:8361227-8361246 | None:intergenic | 10.0% |
| !! | CATAATATCAATAGTTATTA+TGG | - | chr5_2:8354307-8354326 | Msa0754660:three_prime_UTR | 15.0% |
| !!! | AGTTTTTATCTTATTTTACA+GGG | + | chr5_2:8355466-8355485 | None:intergenic | 15.0% |
| !!! | TAGTTTTTATCTTATTTTAC+AGG | + | chr5_2:8355467-8355486 | None:intergenic | 15.0% |
| !! | AAAAAATAAAAGCAAAAAAC+CGG | - | chr5_2:8355781-8355800 | Msa0754660:intron | 15.0% |
| !! | AAATGCAAAAATTAATAACT+CGG | + | chr5_2:8355952-8355971 | None:intergenic | 15.0% |
| !!! | GTTATTAATTTTTGCATTTT+TGG | - | chr5_2:8355953-8355972 | Msa0754660:intron | 15.0% |
| !! | ACCATTTGATTAAAAATAAA+TGG | - | chr5_2:8356830-8356849 | Msa0754660:intron | 15.0% |
| !!! | ACCATTTATTTTTAATCAAA+TGG | + | chr5_2:8356834-8356853 | None:intergenic | 15.0% |
| !!! | TTATATTTAACCTCTTATTT+TGG | + | chr5_2:8357189-8357208 | None:intergenic | 15.0% |
| !! | TTATGAAATTTGATAGAATA+AGG | - | chr5_2:8357701-8357720 | Msa0754660:intron | 15.0% |
| !!! | TGTAAAATAGGTTTTTAAAT+AGG | + | chr5_2:8358457-8358476 | None:intergenic | 15.0% |
| !! | AAGATTGCATTAATAAAATT+TGG | + | chr5_2:8358520-8358539 | None:intergenic | 15.0% |
| !! | TTATTTAATAACACGTATAT+TGG | + | chr5_2:8358597-8358616 | None:intergenic | 15.0% |
| !! | AAGAAAAATTATTATTGCAT+TGG | - | chr5_2:8359199-8359218 | Msa0754660:intron | 15.0% |
| !! | AAAGGAATTAAGAAAATTAA+TGG | + | chr5_2:8360113-8360132 | None:intergenic | 15.0% |
| !! | AAAAAAACATCATAAAAAAG+TGG | + | chr5_2:8360279-8360298 | None:intergenic | 15.0% |
| !! | TAAAATAGATGTAATTGTAT+TGG | + | chr5_2:8360326-8360345 | None:intergenic | 15.0% |
| !!! | AATTACATCTATTTTATATG+TGG | - | chr5_2:8360330-8360349 | Msa0754660:intron | 15.0% |
| !!! | ATTACATCTATTTTATATGT+GGG | - | chr5_2:8360331-8360350 | Msa0754660:intron | 15.0% |
| !! | TTTCAAACCAATATAAAAAT+TGG | + | chr5_2:8361180-8361199 | None:intergenic | 15.0% |
| !!! | GTTTTTTCTCAAATAATTAA+AGG | + | chr5_2:8361228-8361247 | None:intergenic | 15.0% |
| !!! | TTTTTCTATAGATGCTATAT+TGG | - | chr5_2:8354238-8354257 | Msa0754660:three_prime_UTR | 20.0% |
| !!! | TTGTATGAATGATTTTTATG+CGG | - | chr5_2:8354456-8354475 | Msa0754660:three_prime_UTR | 20.0% |
| !! | ATTTGAAGAAAATGAAATAG+AGG | - | chr5_2:8354509-8354528 | Msa0754660:three_prime_UTR | 20.0% |
| !! | TTTGAAGAAAATGAAATAGA+GGG | - | chr5_2:8354510-8354529 | Msa0754660:three_prime_UTR | 20.0% |
| !! | CAAGAATAATAACTTTCAAA+AGG | + | chr5_2:8354651-8354670 | None:intergenic | 20.0% |
| !! | TAAAAAACAATCTAGAAGTT+GGG | - | chr5_2:8355072-8355091 | Msa0754660:intron | 20.0% |
| !!! | TTATTTAAGATAGATCGATT+TGG | - | chr5_2:8355140-8355159 | Msa0754660:intron | 20.0% |
| !! | AACTATGTATATTGTGATAA+TGG | + | chr5_2:8355216-8355235 | None:intergenic | 20.0% |
| !!! | GTTTTTATCTTATTTTACAG+GGG | + | chr5_2:8355465-8355484 | None:intergenic | 20.0% |
| !! | TCCAACAATAATAATTTCAT+AGG | - | chr5_2:8355487-8355506 | Msa0754660:intron | 20.0% |
| !!! | AATTGGAATCATACTTTTTT+GGG | + | chr5_2:8355581-8355600 | None:intergenic | 20.0% |
| !!! | TTTTTGGATTTTTATAACTG+GGG | + | chr5_2:8355633-8355652 | None:intergenic | 20.0% |
| !!! | CTTTTTGGATTTTTATAACT+GGG | + | chr5_2:8355634-8355653 | None:intergenic | 20.0% |
| !!! | TCTTTTTGGATTTTTATAAC+TGG | + | chr5_2:8355635-8355654 | None:intergenic | 20.0% |
| !! | ATCAATAACATTTAATTCCA+AGG | - | chr5_2:8355690-8355709 | Msa0754660:intron | 20.0% |
| !! | AAAATGCAATAGTTAATATG+TGG | + | chr5_2:8356134-8356153 | None:intergenic | 20.0% |
| !!! | ACTAGTTAGCTATTAATTTT+AGG | - | chr5_2:8356281-8356300 | Msa0754660:intron | 20.0% |
| !!! | GAGTTTTTTGCTTAATAAAT+TGG | - | chr5_2:8356611-8356630 | Msa0754660:intron | 20.0% |
| !!! | TCATGAATTTTTGAAATTGT+TGG | + | chr5_2:8357056-8357075 | None:intergenic | 20.0% |
| !! | ATTTCTTCAATAAGAACATT+AGG | + | chr5_2:8357240-8357259 | None:intergenic | 20.0% |
| !!! | GTTCATATATTTTGCAATAT+TGG | + | chr5_2:8357442-8357461 | None:intergenic | 20.0% |
| !!! | ACCATATATTTTTGATCTAA+TGG | - | chr5_2:8357753-8357772 | Msa0754660:intron | 20.0% |
| !! | ACCATTAGATCAAAAATATA+TGG | + | chr5_2:8357757-8357776 | None:intergenic | 20.0% |
| !!! | TATAATTTTTGAAGTATGTC+AGG | + | chr5_2:8358350-8358369 | None:intergenic | 20.0% |
| !! | TGACATACTTCAAAAATTAT+AGG | - | chr5_2:8358349-8358368 | Msa0754660:intron | 20.0% |
| !!! | TAAAAACCTATTTTACACTA+AGG | - | chr5_2:8358460-8358479 | Msa0754660:intron | 20.0% |
| !! | ATATTTAGTAGTAGGTTTAT+AGG | + | chr5_2:8358496-8358515 | None:intergenic | 20.0% |
| !! | TTATATATAAAACGCTGAAT+AGG | - | chr5_2:8358682-8358701 | Msa0754660:intron | 20.0% |
| !! | ATTGTCCTTAATAAATGTTA+TGG | - | chr5_2:8358941-8358960 | Msa0754660:intron | 20.0% |
| !! | CTTTACCATAACATTTATTA+AGG | + | chr5_2:8358949-8358968 | None:intergenic | 20.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | - | chr5_2:8359103-8359122 | Msa0754660:intron | 20.0% |
| !!! | TGTATATAGTATTGATTGAA+GGG | - | chr5_2:8359166-8359185 | Msa0754660:intron | 20.0% |
| !! | TAATGTTTCATTTGTATTGT+AGG | - | chr5_2:8359329-8359348 | Msa0754660:intron | 20.0% |
| !! | AATTGTCCTTAATAATGTTA+TGG | - | chr5_2:8359440-8359459 | Msa0754660:CDS | 20.0% |
| !! | TCTTTACCATAACATTATTA+AGG | + | chr5_2:8359449-8359468 | None:intergenic | 20.0% |
| !! | GAGAGAATAATAAATAGTTA+AGG | - | chr5_2:8359490-8359509 | Msa0754660:CDS | 20.0% |
| !! | TCTATACAACTTAGAAAATT+TGG | + | chr5_2:8359674-8359693 | None:intergenic | 20.0% |
| !!! | TTTTCTCAATATATCTAGAA+TGG | - | chr5_2:8360084-8360103 | Msa0754660:intron | 20.0% |
| !!! | TTTCTCAATATATCTAGAAT+GGG | - | chr5_2:8360085-8360104 | Msa0754660:intron | 20.0% |
| !!! | AGTTTTACAAAACAAACAAT+GGG | + | chr5_2:8360224-8360243 | None:intergenic | 20.0% |
| !!! | AAGTTTTACAAAACAAACAA+TGG | + | chr5_2:8360225-8360244 | None:intergenic | 20.0% |
| !!! | ATTGTTTGTTTTGTAAAACT+TGG | - | chr5_2:8360224-8360243 | Msa0754660:intron | 20.0% |
| !!! | TTGTTTTTCTCATTTCTTAT+TGG | + | chr5_2:8360635-8360654 | None:intergenic | 20.0% |
| !! | AATAAGAAATGAGAAAAACA+AGG | - | chr5_2:8360634-8360653 | Msa0754660:intron | 20.0% |
| !!! | GCATTACTAAATTTTAATTG+TGG | + | chr5_2:8360725-8360744 | None:intergenic | 20.0% |
| !!! | AACTTTGAAAATTTACAGAA+AGG | + | chr5_2:8360835-8360854 | None:intergenic | 20.0% |
| !!! | CCTTTTTCTTTTCTAATTAA+CGG | + | chr5_2:8361049-8361068 | None:intergenic | 20.0% |
| !!! | TTCAGTACCAATTTTTATAT+TGG | - | chr5_2:8361170-8361189 | Msa0754660:CDS | 20.0% |
| !!! | TTGGTTTGAAAAATGAATTA+AGG | - | chr5_2:8361189-8361208 | Msa0754660:CDS | 20.0% |
| !! | TTATTTGAGAAAAAACTTAC+AGG | - | chr5_2:8361232-8361251 | Msa0754660:CDS | 20.0% |
| !! | ATAATAATACTAAGATGTCA+TGG | - | chr5_2:8361382-8361401 | Msa0754660:CDS | 20.0% |
| !!! | GATGTATTTGTTATAGTTTT+TGG | - | chr5_2:8361603-8361622 | Msa0754660:five_prime_UTR | 20.0% |
| ! | TAACTTTCAAAAGGTAACAA+TGG | + | chr5_2:8354642-8354661 | None:intergenic | 25.0% |
| ! | AAGTTATTATTCTTGTCCTT+TGG | - | chr5_2:8354656-8354675 | Msa0754660:intron | 25.0% |
| ! | CTAAAAAACAATCTAGAAGT+TGG | - | chr5_2:8355071-8355090 | Msa0754660:intron | 25.0% |
| !! | TTATTCTAACCTTTTAGACA+TGG | - | chr5_2:8355170-8355189 | Msa0754660:intron | 25.0% |
| !! | TATTCTAACCTTTTAGACAT+GGG | - | chr5_2:8355171-8355190 | Msa0754660:intron | 25.0% |
| !! | ATATACATAGTTTTCAGACT+CGG | - | chr5_2:8355224-8355243 | Msa0754660:intron | 25.0% |
| ! | GCCTATGAAATTATTATTGT+TGG | + | chr5_2:8355491-8355510 | None:intergenic | 25.0% |
| ! | TCATAACTCAAAATACATCT+TGG | - | chr5_2:8355535-8355554 | Msa0754660:intron | 25.0% |
| !!! | ATACTTTTTTGGGATCTATT+TGG | + | chr5_2:8355571-8355590 | None:intergenic | 25.0% |
| !!! | GAATTGGAATCATACTTTTT+TGG | + | chr5_2:8355582-8355601 | None:intergenic | 25.0% |
| ! | ACTTGAATTTATGTTGGAAT+TGG | + | chr5_2:8355598-8355617 | None:intergenic | 25.0% |
| ! | TGTTGGAATTATACTTTGTT+GGG | + | chr5_2:8355659-8355678 | None:intergenic | 25.0% |
| !! | ATTGATGATAATACTTGTGT+TGG | + | chr5_2:8355676-8355695 | None:intergenic | 25.0% |
| ! | CTCCATCTATTTCAAATATT+TGG | - | chr5_2:8356220-8356239 | Msa0754660:intron | 25.0% |
| ! | TTGTAAATCAAATCAACAGA+CGG | - | chr5_2:8356335-8356354 | Msa0754660:intron | 25.0% |
| ! | AGATACATGTGTTTCTTAAA+TGG | + | chr5_2:8356872-8356891 | None:intergenic | 25.0% |
| ! | GTTTATGAGAAACAATCTAA+TGG | + | chr5_2:8356899-8356918 | None:intergenic | 25.0% |
| ! | AGAAGATGAAACGTTAAAAT+GGG | + | chr5_2:8356921-8356940 | None:intergenic | 25.0% |
| ! | AAGAAGATGAAACGTTAAAA+TGG | + | chr5_2:8356922-8356941 | None:intergenic | 25.0% |
| !! | GGATGAAGTTATAAGTTTTT+GGG | + | chr5_2:8357035-8357054 | None:intergenic | 25.0% |
| !! | TGGATGAAGTTATAAGTTTT+TGG | + | chr5_2:8357036-8357055 | None:intergenic | 25.0% |
| ! | ATTTGAGAATTTGATGTTCT+TGG | + | chr5_2:8357116-8357135 | None:intergenic | 25.0% |
| ! | ATAAAGCAAAATCAATACGT+TGG | - | chr5_2:8357343-8357362 | Msa0754660:intron | 25.0% |
| !! | TTAATTGAATTGTGTTGCTA+TGG | - | chr5_2:8357621-8357640 | Msa0754660:intron | 25.0% |
| !! | TAATTGAATTGTGTTGCTAT+GGG | - | chr5_2:8357622-8357641 | Msa0754660:intron | 25.0% |
| ! | AAATTTGATAGAATAAGGTG+AGG | - | chr5_2:8357706-8357725 | Msa0754660:intron | 25.0% |
| ! | ATGGTTAACTTATATGAGAA+TGG | + | chr5_2:8357795-8357814 | None:intergenic | 25.0% |
| ! | ATAGTATACATCCTCATATA+GGG | - | chr5_2:8357819-8357838 | Msa0754660:intron | 25.0% |
| ! | ATAAAAGACACCTTCATAAA+AGG | - | chr5_2:8357987-8358006 | Msa0754660:intron | 25.0% |
| ! | ATAAAAGACATCTTCACAAA+AGG | - | chr5_2:8358196-8358215 | Msa0754660:intron | 25.0% |
| ! | AGGAAATTAGGGAAAAAAAT+GGG | - | chr5_2:8358293-8358312 | Msa0754660:intron | 25.0% |
| ! | AATTTGGCATATTTAGTAGT+AGG | + | chr5_2:8358504-8358523 | None:intergenic | 25.0% |
| ! | ACTTGATTCTTCATATGATT+TGG | + | chr5_2:8358620-8358639 | None:intergenic | 25.0% |
| ! | TAATTAAATAGGTCAAGCTA+AGG | + | chr5_2:8358743-8358762 | None:intergenic | 25.0% |
| !!! | ACATGTAATTGGTTTTGTAT+AGG | - | chr5_2:8358885-8358904 | Msa0754660:intron | 25.0% |
| ! | AAACGACATTCAATTTGAAA+CGG | + | chr5_2:8359016-8359035 | None:intergenic | 25.0% |
| !! | TTCAAATTGAATGTCGTTTA+AGG | - | chr5_2:8359017-8359036 | Msa0754660:intron | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | + | chr5_2:8359113-8359132 | None:intergenic | 25.0% |
| !!! | GTGTATATAGTATTGATTGA+AGG | - | chr5_2:8359165-8359184 | Msa0754660:intron | 25.0% |
| ! | AAACGACATATAATTTGAGA+CGG | - | chr5_2:8359597-8359616 | Msa0754660:intron | 25.0% |
| ! | AAGTTGTATAGAAATACCTT+AGG | - | chr5_2:8359682-8359701 | Msa0754660:intron | 25.0% |
| !! | TTGAGAGTTAAAACCTTTTA+AGG | - | chr5_2:8359712-8359731 | Msa0754660:intron | 25.0% |
| !! | TGAGAGTTAAAACCTTTTAA+GGG | - | chr5_2:8359713-8359732 | Msa0754660:intron | 25.0% |
| !! | ATTTTCTTAATTCCTTTCTC+TGG | - | chr5_2:8360116-8360135 | Msa0754660:intron | 25.0% |
| !! | TTTTCTTAATTCCTTTCTCT+GGG | - | chr5_2:8360117-8360136 | Msa0754660:intron | 25.0% |
| !! | GTTTTACAAAACAAACAATG+GGG | + | chr5_2:8360223-8360242 | None:intergenic | 25.0% |
| ! | AAAACAATGAAGAGAGAAAA+AGG | + | chr5_2:8360609-8360628 | None:intergenic | 25.0% |
| ! | TCAACAAAGTTGTCATTAAA+TGG | - | chr5_2:8360660-8360679 | Msa0754660:intron | 25.0% |
| !!! | ATTAAGTTTTTCAACTGTCT+TGG | + | chr5_2:8360805-8360824 | None:intergenic | 25.0% |
| ! | TTTCTAATTAACGGTACTTA+GGG | + | chr5_2:8361040-8361059 | None:intergenic | 25.0% |
| !! | TTTTCTAATTAACGGTACTT+AGG | + | chr5_2:8361041-8361060 | None:intergenic | 25.0% |
| ! | CCGTTAATTAGAAAAGAAAA+AGG | - | chr5_2:8361046-8361065 | Msa0754660:CDS | 25.0% |
| ! | TCTGCAATAAATAAATAGTG+TGG | + | chr5_2:8361259-8361278 | None:intergenic | 25.0% |
| ! | TATTTATTGCAGAAAGAAAC+AGG | - | chr5_2:8361266-8361285 | Msa0754660:CDS | 25.0% |
| !! | GCTTTTTACAAGATCATTTT+CGG | + | chr5_2:8361303-8361322 | None:intergenic | 25.0% |
| ! | AGTATTATTATTTCATCGAC+CGG | + | chr5_2:8361373-8361392 | None:intergenic | 25.0% |
| ! | TTAAAGAAAGGAAGATGAAA+TGG | + | chr5_2:8361650-8361669 | None:intergenic | 25.0% |
| TGCTTAACAATTTCAGAGAT+TGG | + | chr5_2:8354268-8354287 | None:intergenic | 30.0% | |
| !! | CTCTGAAATTGTTAAGCAAA+AGG | - | chr5_2:8354270-8354289 | Msa0754660:three_prime_UTR | 30.0% |
| AATTAGCTGGTTATCTGATT+GGG | - | chr5_2:8354361-8354380 | Msa0754660:three_prime_UTR | 30.0% | |
| !! | AGCAAGTATTTTTCAACAAG+AGG | - | chr5_2:8354599-8354618 | Msa0754660:CDS | 30.0% |
| ! | TTGTCCTTTGGAAACAAATT+TGG | - | chr5_2:8354668-8354687 | Msa0754660:intron | 30.0% |
| ! | CTTTCCAAATTTGTTTCCAA+AGG | + | chr5_2:8354675-8354694 | None:intergenic | 30.0% |
| AACTACCTCAAAATCAAGAA+GGG | - | chr5_2:8354757-8354776 | Msa0754660:intron | 30.0% | |
| !!! | TTAGAGCTACGTGTTTTTTT+GGG | + | chr5_2:8355055-8355074 | None:intergenic | 30.0% |
| !!! | TTTAGAGCTACGTGTTTTTT+TGG | + | chr5_2:8355056-8355075 | None:intergenic | 30.0% |
| !! | TATTGTGATAATGGTCCAAA+CGG | + | chr5_2:8355207-8355226 | None:intergenic | 30.0% |
| GTTATTTAACCGGATTAACT+CGG | - | chr5_2:8355387-8355406 | Msa0754660:intron | 30.0% | |
| CTGCTTACTTGAATTTATGT+TGG | + | chr5_2:8355604-8355623 | None:intergenic | 30.0% | |
| ! | ATACTTTGTTGGGATCTTTT+TGG | + | chr5_2:8355649-8355668 | None:intergenic | 30.0% |
| GTGTTGGAATTATACTTTGT+TGG | + | chr5_2:8355660-8355679 | None:intergenic | 30.0% | |
| CAAAAATTAATAACTCGGCT+CGG | + | chr5_2:8355947-8355966 | None:intergenic | 30.0% | |
| !!! | TTTTGGGACCAAACTTTATT+CGG | - | chr5_2:8355970-8355989 | Msa0754660:intron | 30.0% |
| TACACATACCGAATAAAGTT+TGG | + | chr5_2:8355981-8356000 | None:intergenic | 30.0% | |
| TGTAGTGATGAGAATTCATT+TGG | + | chr5_2:8356186-8356205 | None:intergenic | 30.0% | |
| ! | CGCCAAATATTTGAAATAGA+TGG | + | chr5_2:8356225-8356244 | None:intergenic | 30.0% |
| ! | CACGTTTTTGTCCAAAATTT+TGG | + | chr5_2:8356562-8356581 | None:intergenic | 30.0% |
| ! | GCAAAAAACTCTTTTGCTTT+TGG | + | chr5_2:8356602-8356621 | None:intergenic | 30.0% |
| TGCTATTAACAACAAAGAGA+TGG | + | chr5_2:8356653-8356672 | None:intergenic | 30.0% | |
| TTGACATAACAATCATTGCT+CGG | - | chr5_2:8356700-8356719 | Msa0754660:intron | 30.0% | |
| ATGCCTTCTTTATATGAGAA+TGG | - | chr5_2:8356792-8356811 | Msa0754660:intron | 30.0% | |
| TCACCATTCTCATATAAAGA+AGG | + | chr5_2:8356798-8356817 | None:intergenic | 30.0% | |
| TGAAATTTGACGTTAATGGT+GGG | + | chr5_2:8356985-8357004 | None:intergenic | 30.0% | |
| ATGAAATTTGACGTTAATGG+TGG | + | chr5_2:8356986-8357005 | None:intergenic | 30.0% | |
| ACCATTAACGTCAAATTTCA+TGG | - | chr5_2:8356985-8357004 | Msa0754660:intron | 30.0% | |
| !!! | AAGTTTTTGGGTGAATTTTC+TGG | + | chr5_2:8357023-8357042 | None:intergenic | 30.0% |
| TTTGATGTTCTTGGAGTTTA+AGG | + | chr5_2:8357107-8357126 | None:intergenic | 30.0% | |
| AAGAGATCTTCCAAAATAAG+AGG | - | chr5_2:8357176-8357195 | Msa0754660:intron | 30.0% | |
| CATAGTATACATCCTCATAT+AGG | - | chr5_2:8357818-8357837 | Msa0754660:intron | 30.0% | |
| TTGTAACAAAACCCTATATG+AGG | + | chr5_2:8357833-8357852 | None:intergenic | 30.0% | |
| ! | TTTTAACAAGTCACACCTTA+AGG | - | chr5_2:8357872-8357891 | Msa0754660:intron | 30.0% |
| AAAGTGAAAATCACACCTTA+AGG | + | chr5_2:8357890-8357909 | None:intergenic | 30.0% | |
| ACACCTTCATAAAAGTAAGT+TGG | - | chr5_2:8357932-8357951 | Msa0754660:intron | 30.0% | |
| !! | ACACCAACTTACTTTTATGA+AGG | + | chr5_2:8357938-8357957 | None:intergenic | 30.0% |
| ! | TTTTATCAAGCAACACCTTA+AGG | - | chr5_2:8358081-8358100 | Msa0754660:intron | 30.0% |
| AAAGTGAAAATCACACCTTA+AGG | + | chr5_2:8357890-8357909 | None:intergenic | 30.0% | |
| ACACCTTCATAAAAGTAAGT+TGG | - | chr5_2:8357932-8357951 | Msa0754660:intron | 30.0% | |
| !! | ACACCAACTTACTTTTATGA+AGG | + | chr5_2:8357938-8357957 | None:intergenic | 30.0% |
| TGTTCGTTGTAGTAAATTGT+TGG | - | chr5_2:8358262-8358281 | Msa0754660:intron | 30.0% | |
| GAGGAAATTAGGGAAAAAAA+TGG | - | chr5_2:8358292-8358311 | Msa0754660:intron | 30.0% | |
| !!! | TTTTGAAGTATGTCAGGTTT+AGG | + | chr5_2:8358344-8358363 | None:intergenic | 30.0% |
| ! | ACTTCATCATGCCTTTAAAA+AGG | + | chr5_2:8358427-8358446 | None:intergenic | 30.0% |
| !! | AGTTAGGCTTTAAATAGGTT+AGG | - | chr5_2:8358816-8358835 | Msa0754660:intron | 30.0% |
| ! | ATTACATTTCCTCTAGAGAT+GGG | + | chr5_2:8359379-8359398 | None:intergenic | 30.0% |
| ! | AATTACATTTCCTCTAGAGA+TGG | + | chr5_2:8359380-8359399 | None:intergenic | 30.0% |
| !! | GTCTTAAAGGTTAGTCTATT+GGG | - | chr5_2:8359646-8359665 | Msa0754660:intron | 30.0% |
| !! | TCTTAAAGGTTAGTCTATTG+GGG | - | chr5_2:8359647-8359666 | Msa0754660:intron | 30.0% |
| ! | ATAGAAATACCTTAGGTTGT+CGG | - | chr5_2:8359689-8359708 | Msa0754660:intron | 30.0% |
| !! | AGTTAAAACCTTTTAAGGGT+TGG | - | chr5_2:8359717-8359736 | Msa0754660:intron | 30.0% |
| !! | AAACTATATTCGAGTTGGTT+CGG | + | chr5_2:8359750-8359769 | None:intergenic | 30.0% |
| ! | CTATTTTATATGTGGGAAGA+TGG | - | chr5_2:8360338-8360357 | Msa0754660:intron | 30.0% |
| TACTACCAAATTGAATCAGA+AGG | - | chr5_2:8360362-8360381 | Msa0754660:intron | 30.0% | |
| TTCTTCCTTCTGATTCAATT+TGG | + | chr5_2:8360370-8360389 | None:intergenic | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr5_2:8360537-8360556 | Msa0754660:intron | 30.0% |
| !! | TTTTTCAACTGTCTTGGAAA+TGG | + | chr5_2:8360799-8360818 | None:intergenic | 30.0% |
| CATAAGCTCCTAATTATTTG+TGG | - | chr5_2:8361482-8361501 | Msa0754660:intron | 30.0% | |
| ! | CATTCAAGCTTCTTGTATTT+TGG | - | chr5_2:8361533-8361552 | Msa0754660:intron | 30.0% |
| !!! | TCTTTGTTTTGTCCTTGATT+TGG | - | chr5_2:8361580-8361599 | Msa0754660:exon | 30.0% |
| !!! | CTTTGTTTTGTCCTTGATTT+GGG | - | chr5_2:8361581-8361600 | Msa0754660:exon | 30.0% |
| AACAAATACATCCCAAATCA+AGG | + | chr5_2:8361595-8361614 | None:intergenic | 30.0% | |
| CAATTAGCTGGTTATCTGAT+TGG | - | chr5_2:8354360-8354379 | Msa0754660:three_prime_UTR | 35.0% | |
| GTCACTTGACTGATATATGA+AGG | + | chr5_2:8354399-8354418 | None:intergenic | 35.0% | |
| CAATGCGAACAAAACTTGTA+TGG | - | chr5_2:8354549-8354568 | Msa0754660:exon | 35.0% | |
| CAACTACCTCAAAATCAAGA+AGG | - | chr5_2:8354756-8354775 | Msa0754660:intron | 35.0% | |
| ! | AATGACCCTTCTTGATTTTG+AGG | + | chr5_2:8354765-8354784 | None:intergenic | 35.0% |
| AGATCTCATTGTCTCATTCA+TGG | - | chr5_2:8354961-8354980 | Msa0754660:intron | 35.0% | |
| TCTCATTCATGGATTCTTCA+AGG | - | chr5_2:8354972-8354991 | Msa0754660:intron | 35.0% | |
| TGATGAGAATTCATTTGGAG+TGG | + | chr5_2:8356181-8356200 | None:intergenic | 35.0% | |
| CTAATACTCTCAAACGTTCT+TGG | + | chr5_2:8356407-8356426 | None:intergenic | 35.0% | |
| TACAAGTCATGGAGTGAATA+TGG | - | chr5_2:8356489-8356508 | Msa0754660:intron | 35.0% | |
| ! | ATGGAGTGAATATGGTTCTA+AGG | - | chr5_2:8356497-8356516 | Msa0754660:intron | 35.0% |
| GAGCAATGATTGTTATGTCA+AGG | + | chr5_2:8356701-8356720 | None:intergenic | 35.0% | |
| TGACATAACAATCATTGCTC+GGG | - | chr5_2:8356701-8356720 | Msa0754660:intron | 35.0% | |
| GCCATGAAATTTGACGTTAA+TGG | + | chr5_2:8356989-8357008 | None:intergenic | 35.0% | |
| ! | TGTTCTTGGAGTTTAAGGTT+AGG | + | chr5_2:8357102-8357121 | None:intergenic | 35.0% |
| TCTACCAACATTACTGTCAA+CGG | - | chr5_2:8357408-8357427 | Msa0754660:intron | 35.0% | |
| AGTTGAAATGTACTGAGAGA+TGG | - | chr5_2:8357653-8357672 | Msa0754660:intron | 35.0% | |
| GAGGATGTATACTATGAGAA+TGG | + | chr5_2:8357814-8357833 | None:intergenic | 35.0% | |
| TGTTAAAAGACACCACCAAA+GGG | + | chr5_2:8357860-8357879 | None:intergenic | 35.0% | |
| TTGTTAAAAGACACCACCAA+AGG | + | chr5_2:8357861-8357880 | None:intergenic | 35.0% | |
| ! | ATAGACGACACCTTTTATGA+AGG | + | chr5_2:8358000-8358019 | None:intergenic | 35.0% |
| ! | TTTTGTTACAAGACACCCTT+TGG | - | chr5_2:8358051-8358070 | Msa0754660:intron | 35.0% |
| TGATAAAAGACACCACCAAA+GGG | + | chr5_2:8358069-8358088 | None:intergenic | 35.0% | |
| TTGATAAAAGACACCACCAA+AGG | + | chr5_2:8358070-8358089 | None:intergenic | 35.0% | |
| GTTGTAGTAAATTGTTGGAG+TGG | - | chr5_2:8358267-8358286 | Msa0754660:intron | 35.0% | |
| GCTAGACCTTAGTGTAAAAT+AGG | + | chr5_2:8358469-8358488 | None:intergenic | 35.0% | |
| AAAAGCCTATTAAGCACATC+AGG | + | chr5_2:8358712-8358731 | None:intergenic | 35.0% | |
| CTTTAAATAGGTTAGGTGTC+AGG | - | chr5_2:8358823-8358842 | Msa0754660:intron | 35.0% | |
| ACAGAGGGAGTAAATACTTA+AGG | - | chr5_2:8359284-8359303 | Msa0754660:intron | 35.0% | |
| ! | GACATATAATTTGAGACGGA+GGG | - | chr5_2:8359601-8359620 | Msa0754660:intron | 35.0% |
| AGGAAAACAGATGTATGCTA+AGG | - | chr5_2:8359624-8359643 | Msa0754660:intron | 35.0% | |
| GATGTATGCTAAGGTCTTAA+AGG | - | chr5_2:8359633-8359652 | Msa0754660:intron | 35.0% | |
| !! | GGTCTTAAAGGTTAGTCTAT+TGG | - | chr5_2:8359645-8359664 | Msa0754660:intron | 35.0% |
| !! | CTTAAAGGTTAGTCTATTGG+GGG | - | chr5_2:8359648-8359667 | Msa0754660:intron | 35.0% |
| GAACCAACTCGAATATAGTT+TGG | - | chr5_2:8359749-8359768 | Msa0754660:intron | 35.0% | |
| GTTCCAAACTATATTCGAGT+TGG | + | chr5_2:8359755-8359774 | None:intergenic | 35.0% | |
| GACAATTAACTCGTTGAGTT+TGG | - | chr5_2:8359782-8359801 | Msa0754660:intron | 35.0% | |
| ! | TAGCTCAAGTTTAGCTCATT+TGG | + | chr5_2:8359816-8359835 | None:intergenic | 35.0% |
| AACTTGAGCTATGCATAGTT+CGG | - | chr5_2:8359865-8359884 | Msa0754660:intron | 35.0% | |
| TTACAAAACAAACAATGGGG+TGG | + | chr5_2:8360220-8360239 | None:intergenic | 35.0% | |
| ATCAGAAGGAAGAAAACTGA+TGG | - | chr5_2:8360376-8360395 | Msa0754660:intron | 35.0% | |
| GTTAACTAAATAGCCGATGT+GGG | + | chr5_2:8360470-8360489 | None:intergenic | 35.0% | |
| TGTTAACTAAATAGCCGATG+TGG | + | chr5_2:8360471-8360490 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr5_2:8360542-8360561 | None:intergenic | 35.0% | |
| CTTGGAAATGGTTATCACTA+TGG | + | chr5_2:8360787-8360806 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTTAAGCTCGAGTT+CGG | + | chr5_2:8360927-8360946 | None:intergenic | 35.0% |
| TAATTAACGGTACTTAGGGT+TGG | + | chr5_2:8361036-8361055 | None:intergenic | 35.0% | |
| TACATGTTCATGTTACGACA+TGG | + | chr5_2:8361348-8361367 | None:intergenic | 35.0% | |
| !! | GGAGTATTTTCTTACCTCAT+TGG | - | chr5_2:8361403-8361422 | Msa0754660:intron | 35.0% |
| TGGTGTTTGAGTATCAGATT+GGG | - | chr5_2:8361438-8361457 | Msa0754660:intron | 35.0% | |
| GAACCACACCACAAATAATT+AGG | + | chr5_2:8361493-8361512 | None:intergenic | 35.0% | |
| !!! | CAAGCTTCTTGTATTTTGGT+TGG | - | chr5_2:8361537-8361556 | Msa0754660:CDS | 35.0% |
| CAAACGCATCATCAATTAGC+TGG | - | chr5_2:8354348-8354367 | Msa0754660:three_prime_UTR | 40.0% | |
| TGGAACAACTTCATGCAAAG+TGG | + | chr5_2:8354724-8354743 | None:intergenic | 40.0% | |
| GGTAGTTGTGTTTGTGACAA+TGG | + | chr5_2:8354744-8354763 | None:intergenic | 40.0% | |
| CACAAAGACAAGAGACTAAG+AGG | - | chr5_2:8354817-8354836 | Msa0754660:intron | 40.0% | |
| TGATCATCAAGACCGTATCA+TGG | - | chr5_2:8354851-8354870 | Msa0754660:intron | 40.0% | |
| ! | TCTTATTCCTGGCTTGAAGA+AGG | - | chr5_2:8354926-8354945 | Msa0754660:intron | 40.0% |
| GTTTCGATCCCATGTCTAAA+AGG | + | chr5_2:8355182-8355201 | None:intergenic | 40.0% | |
| !! | GATGACTCGGTTAGATAACT+CGG | - | chr5_2:8355343-8355362 | Msa0754660:intron | 40.0% |
| CGAGTTAATCCGAGTTAATC+CGG | + | chr5_2:8355399-8355418 | None:intergenic | 40.0% | |
| CGGATTAACTCGGATTAACT+CGG | - | chr5_2:8355397-8355416 | Msa0754660:intron | 40.0% | |
| CGGATTAACTCGGATTGAAT+CGG | - | chr5_2:8355407-8355426 | Msa0754660:intron | 40.0% | |
| CTCAATCAATCTTGACTCCT+TGG | + | chr5_2:8355710-8355729 | None:intergenic | 40.0% | |
| TGGACAAAAACGTGCTCATA+AGG | - | chr5_2:8356568-8356587 | Msa0754660:intron | 40.0% | |
| !! | AACTCTTTTGCTTTTGGCAC+TGG | + | chr5_2:8356596-8356615 | None:intergenic | 40.0% |
| ! | TCACTGTGATGGGAAGTTAA+AGG | + | chr5_2:8356948-8356967 | None:intergenic | 40.0% |
| ATACCAGCAATCACTGTGAT+GGG | + | chr5_2:8356958-8356977 | None:intergenic | 40.0% | |
| !! | TTAGGTTGATCGAGAGATGA+TGG | + | chr5_2:8357084-8357103 | None:intergenic | 40.0% |
| AATCCAACACAGCAAGAGAA+GGG | + | chr5_2:8357279-8357298 | None:intergenic | 40.0% | |
| TAATCCAACACAGCAAGAGA+AGG | + | chr5_2:8357280-8357299 | None:intergenic | 40.0% | |
| AAATGTACTGAGAGATGGAG+TGG | - | chr5_2:8357658-8357677 | Msa0754660:intron | 40.0% | |
| ! | TTTTGTTACAAGCCACCCTT+TGG | - | chr5_2:8357842-8357861 | Msa0754660:intron | 40.0% |
| ! | TGTCTTTTCGCAAAAGCTCA+TGG | - | chr5_2:8358164-8358183 | Msa0754660:intron | 40.0% |
| GTAAATTGTTGGAGTGGAAG+AGG | - | chr5_2:8358273-8358292 | Msa0754660:intron | 40.0% | |
| TTGGAGTGGAAGAGGAAATT+AGG | - | chr5_2:8358281-8358300 | Msa0754660:intron | 40.0% | |
| TGGAGTGGAAGAGGAAATTA+GGG | - | chr5_2:8358282-8358301 | Msa0754660:intron | 40.0% | |
| TTTGACCTATTACCCGTCAT+AGG | - | chr5_2:8358378-8358397 | Msa0754660:intron | 40.0% | |
| CTTAAATGTGAGCCTATGAC+GGG | + | chr5_2:8358393-8358412 | None:intergenic | 40.0% | |
| CCTTAAATGTGAGCCTATGA+CGG | + | chr5_2:8358394-8358413 | None:intergenic | 40.0% | |
| ! | ATAGGCTCACATTTAAGGTG+TGG | - | chr5_2:8358396-8358415 | Msa0754660:intron | 40.0% |
| ! | GTGTGGTCTGACCTTTTTAA+AGG | - | chr5_2:8358413-8358432 | Msa0754660:intron | 40.0% |
| ! | CCTTGTTTGATAAGAAGGCT+AGG | + | chr5_2:8358790-8358809 | None:intergenic | 40.0% |
| ! | CCTAGCCTTCTTATCAAACA+AGG | - | chr5_2:8358787-8358806 | Msa0754660:intron | 40.0% |
| AGCCTTCTTATCAAACAAGG+CGG | - | chr5_2:8358790-8358809 | Msa0754660:intron | 40.0% | |
| !! | GGTCGAGTTAGGCTTTAAAT+AGG | - | chr5_2:8358811-8358830 | Msa0754660:intron | 40.0% |
| ! | ATTACATGTCCTCTAGAGGT+GGG | + | chr5_2:8358874-8358893 | None:intergenic | 40.0% |
| ! | AATTACATGTCCTCTAGAGG+TGG | + | chr5_2:8358875-8358894 | None:intergenic | 40.0% |
| ! | ACCTCTAGAGGACATGTAAT+TGG | - | chr5_2:8358874-8358893 | Msa0754660:intron | 40.0% |
| ACCAATTACATGTCCTCTAG+AGG | + | chr5_2:8358878-8358897 | None:intergenic | 40.0% | |
| TGGCTAAAACGACACTCATT+TGG | - | chr5_2:8359259-8359278 | Msa0754660:intron | 40.0% | |
| GACACTCATTTGGAAACAGA+GGG | - | chr5_2:8359269-8359288 | Msa0754660:intron | 40.0% | |
| ! | CGACATATAATTTGAGACGG+AGG | - | chr5_2:8359600-8359619 | Msa0754660:intron | 40.0% |
| ! | ATATAATTTGAGACGGAGGG+AGG | - | chr5_2:8359604-8359623 | Msa0754660:intron | 40.0% |
| GTTCATTGCCAACCCTTAAA+AGG | + | chr5_2:8359728-8359747 | None:intergenic | 40.0% | |
| ACAACGAAAAACCCAGAGAA+AGG | + | chr5_2:8360131-8360150 | None:intergenic | 40.0% | |
| ! | TCTGGGTTTTTCGTTGTGTT+TGG | - | chr5_2:8360134-8360153 | Msa0754660:intron | 40.0% |
| ! | ACTGATGGCGTATGAATTCA+CGG | - | chr5_2:8360391-8360410 | Msa0754660:intron | 40.0% |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | chr5_2:8360599-8360618 | None:intergenic | 40.0% | |
| ATGCATAGTACTGTCACTCA+CGG | - | chr5_2:8360741-8360760 | Msa0754660:intron | 40.0% | |
| CCGAACTCGAGCTTAAAAAA+AGG | - | chr5_2:8360924-8360943 | Msa0754660:intron | 40.0% | |
| CGACTCGATAAGAATTAGCT+CGG | + | chr5_2:8360979-8360998 | None:intergenic | 40.0% | |
| CGTAACATGAACATGTAGTC+CGG | - | chr5_2:8361351-8361370 | Msa0754660:CDS | 40.0% | |
| GTGGTGTTTGAGTATCAGAT+TGG | - | chr5_2:8361437-8361456 | Msa0754660:intron | 40.0% | |
| GCTCCTAATTATTTGTGGTG+TGG | - | chr5_2:8361487-8361506 | Msa0754660:intron | 40.0% | |
| TCATCAAGACCGTATCATGG+CGG | - | chr5_2:8354854-8354873 | Msa0754660:intron | 45.0% | |
| TCTTTCTCTCCGCCATGATA+CGG | + | chr5_2:8354866-8354885 | None:intergenic | 45.0% | |
| ACTCTAGCTGCTCTTATTCC+TGG | - | chr5_2:8354915-8354934 | Msa0754660:intron | 45.0% | |
| CAACATACCTTCTTCAAGCC+AGG | + | chr5_2:8354936-8354955 | None:intergenic | 45.0% | |
| ATGGGATCGAAACTACCGTT+TGG | - | chr5_2:8355189-8355208 | Msa0754660:intron | 45.0% | |
| ! | CATAGTTTTCAGACTCGGCT+CGG | - | chr5_2:8355229-8355248 | Msa0754660:intron | 45.0% |
| CGGTCAAAACCGGTAAAAAC+CGG | + | chr5_2:8355832-8355851 | None:intergenic | 45.0% | |
| GCAGTTAACTCGGTCAAACT+CGG | + | chr5_2:8355852-8355871 | None:intergenic | 45.0% | |
| GTTTGACCGAGTTAACTGCA+TGG | - | chr5_2:8355853-8355872 | Msa0754660:intron | 45.0% | |
| GTTCGAGCCAACATTTGGAT+CGG | + | chr5_2:8355879-8355898 | None:intergenic | 45.0% | |
| !! | ATCCAAATGTTGGCTCGAAC+CGG | - | chr5_2:8355879-8355898 | Msa0754660:intron | 45.0% |
| !! | ATTAATAACTCGGCTCGGAC+CGG | + | chr5_2:8355942-8355961 | None:intergenic | 45.0% |
| ACGGACAAGACTTCAGTCAT+AGG | - | chr5_2:8356354-8356373 | Msa0754660:intron | 45.0% | |
| CGCAGCTAAGTTACAAGTCA+TGG | - | chr5_2:8356478-8356497 | Msa0754660:intron | 45.0% | |
| TAATGAAGATCTCCTCCACG+TGG | - | chr5_2:8356533-8356552 | Msa0754660:intron | 45.0% | |
| !! | AAATTTTGGCATCCACGTGG+AGG | + | chr5_2:8356548-8356567 | None:intergenic | 45.0% |
| !! | CCAAAATTTTGGCATCCACG+TGG | + | chr5_2:8356551-8356570 | None:intergenic | 45.0% |
| ! | CCACGTGGATGCCAAAATTT+TGG | - | chr5_2:8356548-8356567 | Msa0754660:intron | 45.0% |
| AATAGCAGCGTCCTAGCTAT+TGG | - | chr5_2:8356666-8356685 | Msa0754660:intron | 45.0% | |
| ATAGCAGCGTCCTAGCTATT+GGG | - | chr5_2:8356667-8356686 | Msa0754660:intron | 45.0% | |
| GGATAGAATCCCCAATAGCT+AGG | + | chr5_2:8356680-8356699 | None:intergenic | 45.0% | |
| GATACCAGCAATCACTGTGA+TGG | + | chr5_2:8356959-8356978 | None:intergenic | 45.0% | |
| AGCACCGTTGACAGTAATGT+TGG | + | chr5_2:8357415-8357434 | None:intergenic | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | + | chr5_2:8357857-8357876 | None:intergenic | 45.0% | |
| TGTTACAAGACACCCTTTGG+TGG | - | chr5_2:8358054-8358073 | Msa0754660:intron | 45.0% | |
| !! | GGGAAAAAAATGGGCTAGAC+CGG | - | chr5_2:8358302-8358321 | Msa0754660:intron | 45.0% |
| !! | GGAAAAAAATGGGCTAGACC+GGG | - | chr5_2:8358303-8358322 | Msa0754660:intron | 45.0% |
| CCGTCATAGGCTCACATTTA+AGG | - | chr5_2:8358391-8358410 | Msa0754660:intron | 45.0% | |
| GTCGACCTGATGTGCTTAAT+AGG | - | chr5_2:8358704-8358723 | Msa0754660:intron | 45.0% | |
| !! | GACCGCCTTGTTTGATAAGA+AGG | + | chr5_2:8358795-8358814 | None:intergenic | 45.0% |
| CGACACTCATTTGGAAACAG+AGG | - | chr5_2:8359268-8359287 | Msa0754660:intron | 45.0% | |
| TTGTATTGTAGGCCCTTGTC+TGG | - | chr5_2:8359340-8359359 | Msa0754660:intron | 45.0% | |
| CTAGGTCAAGTACCAGACAA+GGG | + | chr5_2:8359355-8359374 | None:intergenic | 45.0% | |
| ACTAGGTCAAGTACCAGACA+AGG | + | chr5_2:8359356-8359375 | None:intergenic | 45.0% | |
| ! | TTTCCTCTAGAGATGGGACT+AGG | + | chr5_2:8359373-8359392 | None:intergenic | 45.0% |
| AACTCTCAACCGACAACCTA+AGG | + | chr5_2:8359701-8359720 | None:intergenic | 45.0% | |
| ! | TATGCATAGTTCGGCTCGTT+TGG | - | chr5_2:8359874-8359893 | Msa0754660:intron | 45.0% |
| AGTAGCTACTAGTCCCACAT+CGG | - | chr5_2:8360454-8360473 | Msa0754660:intron | 45.0% | |
| CACTGCTATCTATGCCAATG+AGG | + | chr5_2:8361420-8361439 | None:intergenic | 45.0% | |
| CTCATTGGCATAGATAGCAG+TGG | - | chr5_2:8361418-8361437 | Msa0754660:intron | 45.0% | |
| !!! | TTATATAAATATTTTTTGTT+CGG | - | chr5_2:8355017-8355036 | Msa0754660:intron | 5.0% |
| !! | CATATATATATATATATATA+TGG | + | chr5_2:8358027-8358046 | None:intergenic | 5.0% |
| !! | CATATATATATATATATATA+TGG | - | chr5_2:8358027-8358046 | Msa0754660:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTAAAC+AGG | - | chr5_2:8360160-8360179 | Msa0754660:intron | 5.0% |
| !! | AAATAAAATATATTAAAGAA+AGG | + | chr5_2:8361662-8361681 | None:intergenic | 5.0% |
| !!! | TCTTTAATATATTTTATTTT+TGG | - | chr5_2:8361663-8361682 | Msa0754660:five_prime_UTR | 5.0% |
| ATGACTGAACCGGAACCACT+CGG | - | chr5_2:8355321-8355340 | Msa0754660:intron | 50.0% | |
| ATCTAACCGAGTCATCCGAG+TGG | + | chr5_2:8355339-8355358 | None:intergenic | 50.0% | |
| CTCGGATTGAATCGGTGACT+CGG | - | chr5_2:8355415-8355434 | Msa0754660:intron | 50.0% | |
| ACCGGTAAAAACCGGTGACT+CGG | + | chr5_2:8355824-8355843 | None:intergenic | 50.0% | |
| CGGTCAAACTCGGTCAAAAC+CGG | + | chr5_2:8355842-8355861 | None:intergenic | 50.0% | |
| GATCGGCCATGCAGTTAACT+CGG | + | chr5_2:8355862-8355881 | None:intergenic | 50.0% | |
| TGCATGGCCGATCCAAATGT+TGG | - | chr5_2:8355869-8355888 | Msa0754660:intron | 50.0% | |
| TAGCAGCGTCCTAGCTATTG+GGG | - | chr5_2:8356668-8356687 | Msa0754660:intron | 50.0% | |
| CTTCCCATCACAGTGATTGC+TGG | - | chr5_2:8356952-8356971 | Msa0754660:intron | 50.0% | |
| TGTTACAAGCCACCCTTTGG+TGG | - | chr5_2:8357845-8357864 | Msa0754660:intron | 50.0% | |
| AGGCTTTGCAAAGTTCGACC+CGG | + | chr5_2:8358324-8358343 | None:intergenic | 50.0% | |
| !! | GTGAGCCTATGACGGGTAAT+AGG | + | chr5_2:8358386-8358405 | None:intergenic | 50.0% |
| TCAAACAAGGCGGTCGAGTT+AGG | - | chr5_2:8358800-8358819 | Msa0754660:intron | 50.0% | |
| TGACCTAGTCCCATCTCTAG+AGG | - | chr5_2:8359367-8359386 | Msa0754660:CDS | 50.0% | |
| GTTAGGTTCAACTCGGTTGG+AGG | + | chr5_2:8360869-8360888 | None:intergenic | 50.0% | |
| CTCGTTAGGTTCAACTCGGT+TGG | + | chr5_2:8360872-8360891 | None:intergenic | 50.0% | |
| ! | TCGGCTCGTTAGGTTCAACT+CGG | + | chr5_2:8360876-8360895 | None:intergenic | 50.0% |
| AGTTGACGAACAGCTCGACT+CGG | + | chr5_2:8360895-8360914 | None:intergenic | 50.0% | |
| GTACTGGGTCACTGGGTCAA+TGG | - | chr5_2:8355269-8355288 | Msa0754660:intron | 55.0% | |
| TGGGTCAATGGTCGAACCAC+TGG | - | chr5_2:8355281-8355300 | Msa0754660:intron | 55.0% | |
| GGGTCAATGGTCGAACCACT+GGG | - | chr5_2:8355282-8355301 | Msa0754660:intron | 55.0% | |
| GTCGAACCGCATGACTGAAC+CGG | - | chr5_2:8355311-8355330 | Msa0754660:intron | 55.0% | |
| GTGGTTCCGGTTCAGTCATG+CGG | + | chr5_2:8355320-8355339 | None:intergenic | 55.0% | |
| AACCGGTCTGACCCATGACT+CGG | - | chr5_2:8355798-8355817 | Msa0754660:intron | 55.0% | |
| !!! | GCCGAGTCACCGGTTTTTAC+CGG | - | chr5_2:8355820-8355839 | Msa0754660:intron | 55.0% |
| !! | AGCCGGTTCGAGCCAACATT+TGG | + | chr5_2:8355884-8355903 | None:intergenic | 55.0% |
| CCAACACAGCAAGAGAAGGG+AGG | + | chr5_2:8357276-8357295 | None:intergenic | 55.0% | |
| ! | CCTCCCTTCTCTTGCTGTGT+TGG | - | chr5_2:8357273-8357292 | Msa0754660:intron | 55.0% |
| !! | ACTCGGCTCGGTCATCGACT+CGG | - | chr5_2:8355241-8355260 | Msa0754660:intron | 60.0% |
| TGGTCGAACCACTGGGTCGT+TGG | - | chr5_2:8355289-8355308 | Msa0754660:intron | 60.0% | |
| CCGAGTCATCCGAGTGGTTC+CGG | + | chr5_2:8355333-8355352 | None:intergenic | 60.0% | |
| CCGGAACCACTCGGATGACT+CGG | - | chr5_2:8355330-8355349 | Msa0754660:intron | 60.0% | |
| GTTAGGTGTCAGGCCCTCGT+TGG | - | chr5_2:8358833-8358852 | Msa0754660:intron | 60.0% | |
| CAGGTCAAGCCGTCCAACGA+GGG | + | chr5_2:8358849-8358868 | None:intergenic | 60.0% | |
| TGACCTGGTCCCACCTCTAG+AGG | - | chr5_2:8358862-8358881 | Msa0754660:intron | 60.0% | |
| ! | TGTCCTCTAGAGGTGGGACC+AGG | + | chr5_2:8358868-8358887 | None:intergenic | 60.0% |
| !! | ACAGCTCGACTCGGCTCGTT+AGG | + | chr5_2:8360886-8360905 | None:intergenic | 60.0% |
| !! | ATCGACTCGGCGGGGGTACT+GGG | - | chr5_2:8355254-8355273 | Msa0754660:intron | 65.0% |
| CGGTTCGACCAACGACCCAG+TGG | + | chr5_2:8355300-8355319 | None:intergenic | 65.0% | |
| GGCCGAGTCATGGGTCAGAC+CGG | + | chr5_2:8355803-8355822 | None:intergenic | 65.0% | |
| ! | CGGTGACTCGGCCGAGTCAT+GGG | + | chr5_2:8355812-8355831 | None:intergenic | 65.0% |
| ! | CCATGACTCGGCCGAGTCAC+CGG | - | chr5_2:8355810-8355829 | Msa0754660:intron | 65.0% |
| ! | GCTCGAACCGGCTTACCCAC+CGG | - | chr5_2:8355891-8355910 | Msa0754660:intron | 65.0% |
| CCGTGAACCGGTGGGTAAGC+CGG | + | chr5_2:8355901-8355920 | None:intergenic | 65.0% | |
| !! | CCGGCTTACCCACCGGTTCA+CGG | - | chr5_2:8355898-8355917 | Msa0754660:intron | 65.0% |
| !! | ATAACTCGGCTCGGACCGGC+CGG | + | chr5_2:8355938-8355957 | None:intergenic | 65.0% |
| GGTGTCAGGCCCTCGTTGGA+CGG | - | chr5_2:8358837-8358856 | Msa0754660:intron | 65.0% | |
| CCAGGTCAAGCCGTCCAACG+AGG | + | chr5_2:8358850-8358869 | None:intergenic | 65.0% | |
| CCTCGTTGGACGGCTTGACC+TGG | - | chr5_2:8358847-8358866 | Msa0754660:intron | 65.0% | |
| !! | CGGCTCGGTCATCGACTCGG+CGG | - | chr5_2:8355244-8355263 | Msa0754660:intron | 70.0% |
| !! | GGCTCGGTCATCGACTCGGC+GGG | - | chr5_2:8355245-8355264 | Msa0754660:intron | 70.0% |
| !! | GCTCGGTCATCGACTCGGCG+GGG | - | chr5_2:8355246-8355265 | Msa0754660:intron | 70.0% |
| !! | CTCGGTCATCGACTCGGCGG+GGG | - | chr5_2:8355247-8355266 | Msa0754660:intron | 70.0% |
| !! | CATCGACTCGGCGGGGGTAC+TGG | - | chr5_2:8355253-8355272 | Msa0754660:intron | 70.0% |
| !! | GGCGGGGGTACTGGGTCACT+GGG | - | chr5_2:8355262-8355281 | Msa0754660:intron | 70.0% |
| ! | CCGGTGACTCGGCCGAGTCA+TGG | + | chr5_2:8355813-8355832 | None:intergenic | 70.0% |
| CGGTCGGACCGTGAACCGGT+GGG | + | chr5_2:8355909-8355928 | None:intergenic | 70.0% | |
| !! | CCACCGGTTCACGGTCCGAC+CGG | - | chr5_2:8355907-8355926 | Msa0754660:intron | 70.0% |
| GGACCGGTCGGACCGTGAAC+CGG | + | chr5_2:8355913-8355932 | None:intergenic | 70.0% | |
| !! | CGGCGGGGGTACTGGGTCAC+TGG | - | chr5_2:8355261-8355280 | Msa0754660:intron | 75.0% |
| CCGGTCGGACCGTGAACCGG+TGG | + | chr5_2:8355910-8355929 | None:intergenic | 75.0% | |
| CACGGTCCGACCGGTCCGAC+CGG | - | chr5_2:8355916-8355935 | Msa0754660:intron | 75.0% | |
| ! | GTCCGACCGGTCCGACCGGC+CGG | - | chr5_2:8355920-8355939 | Msa0754660:intron | 80.0% |
| ! | GACCGGCCGGTCGGACCGGT+CGG | + | chr5_2:8355925-8355944 | None:intergenic | 80.0% |
| ! | CTCGGACCGGCCGGTCGGAC+CGG | + | chr5_2:8355929-8355948 | None:intergenic | 80.0% |
| !!! | CTCGGCTCGGACCGGCCGGT+CGG | + | chr5_2:8355934-8355953 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 8354226 | 8361693 | 8354226 | ID=Msa0754660;Name=Msa0754660 |
| chr5_2 | mRNA | 8354226 | 8361693 | 8354226 | ID=Msa0754660-mRNA-1;Parent=Msa0754660;Name=Msa0754660-mRNA-1;_AED=0.12;_eAED=0.12;_QI=100|0.66|0.75|1|0.66|1|4|338|266 |
| chr5_2 | exon | 8354226 | 8354641 | 8354226 | ID=Msa0754660-mRNA-1:exon:3800;Parent=Msa0754660-mRNA-1 |
| chr5_2 | exon | 8359341 | 8359565 | 8359341 | ID=Msa0754660-mRNA-1:exon:3799;Parent=Msa0754660-mRNA-1 |
| chr5_2 | exon | 8360972 | 8361412 | 8360972 | ID=Msa0754660-mRNA-1:exon:3798;Parent=Msa0754660-mRNA-1 |
| chr5_2 | exon | 8361537 | 8361693 | 8361537 | ID=Msa0754660-mRNA-1:exon:3797;Parent=Msa0754660-mRNA-1 |
| chr5_2 | five_prime_UTR | 8361594 | 8361693 | 8361594 | ID=Msa0754660-mRNA-1:five_prime_utr;Parent=Msa0754660-mRNA-1 |
| chr5_2 | CDS | 8361537 | 8361593 | 8361537 | ID=Msa0754660-mRNA-1:cds;Parent=Msa0754660-mRNA-1 |
| chr5_2 | CDS | 8360972 | 8361412 | 8360972 | ID=Msa0754660-mRNA-1:cds;Parent=Msa0754660-mRNA-1 |
| chr5_2 | CDS | 8359341 | 8359565 | 8359341 | ID=Msa0754660-mRNA-1:cds;Parent=Msa0754660-mRNA-1 |
| chr5_2 | CDS | 8354564 | 8354641 | 8354564 | ID=Msa0754660-mRNA-1:cds;Parent=Msa0754660-mRNA-1 |
| chr5_2 | three_prime_UTR | 8354226 | 8354563 | 8354226 | ID=Msa0754660-mRNA-1:three_prime_utr;Parent=Msa0754660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
