AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1257440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257440 MtrunA17_Chr4g0056061 98.885 538 6 0 1 538 1 538 0.0 1112
Msa1257440 MtrunA17_Chr5g0399311 83.299 479 76 1 22 496 34 512 0.0 852
Msa1257440 MtrunA17_Chr3g0143821 62.470 413 153 2 79 490 82 493 0.0 548
Msa1257440 MtrunA17_Chr5g0448581 57.206 451 178 4 68 506 68 515 0.0 538
Msa1257440 MtrunA17_Chr1g0160781 44.192 396 187 9 74 444 115 501 3.10e-107 331
Msa1257440 MtrunA17_Chr4g0043911 38.664 494 271 14 28 496 68 554 7.22e-103 320
Msa1257440 MtrunA17_Chr3g0077321 41.355 428 230 9 81 491 123 546 3.57e-101 316
Msa1257440 MtrunA17_Chr5g0417871 42.222 405 211 8 104 491 81 479 2.34e-98 306
Msa1257440 MtrunA17_Chr5g0426591 42.711 391 213 6 78 464 84 467 3.34e-97 305
Msa1257440 MtrunA17_Chr4g0042711 41.606 411 217 8 104 497 93 497 3.70e-97 304
Msa1257440 MtrunA17_Chr4g0008451 41.531 431 228 11 76 491 202 623 5.65e-97 307
Msa1257440 MtrunA17_Chr5g0436321 42.092 411 216 12 97 492 150 553 4.58e-95 300
Msa1257440 MtrunA17_Chr3g0132371 45.652 368 189 7 108 468 141 504 8.44e-95 299
Msa1257440 MtrunA17_Chr6g0455571 44.032 377 203 6 101 470 108 483 1.53e-93 295
Msa1257440 MtrunA17_Chr3g0123521 39.492 433 235 11 80 489 119 547 5.03e-92 292
Msa1257440 MtrunA17_Chr5g0424241 44.382 356 174 7 109 444 158 509 8.29e-92 292
Msa1257440 MtrunA17_Chr2g0284071 36.364 462 239 14 80 491 186 642 2.45e-91 293
Msa1257440 MtrunA17_Chr4g0061781 41.076 409 229 7 101 498 109 516 4.90e-91 288
Msa1257440 MtrunA17_Chr4g0070551 38.876 427 237 11 79 490 201 618 8.29e-91 291
Msa1257440 MtrunA17_Chr3g0129981 44.675 338 179 4 111 444 117 450 1.50e-90 287
Msa1257440 MtrunA17_Chr2g0307971 42.400 375 208 6 101 468 108 481 2.18e-89 284
Msa1257440 MtrunA17_Chr1g0204121 38.756 418 247 6 79 490 61 475 4.80e-87 278
Msa1257440 MtrunA17_Chr5g0412251 36.222 450 242 14 79 490 60 502 1.49e-80 260
Msa1257440 MtrunA17_Chr4g0075311 36.199 442 226 11 73 464 131 566 1.36e-79 260
Msa1257440 MtrunA17_Chr1g0204141 37.678 422 249 8 79 490 61 478 3.55e-79 257
Msa1257440 MtrunA17_Chr3g0087291 38.760 387 223 8 111 489 176 556 7.92e-77 252
Msa1257440 MtrunA17_Chr3g0132951 35.681 426 233 12 101 489 94 515 1.86e-75 248
Msa1257440 MtrunA17_Chr4g0010511 39.848 394 209 10 111 489 236 616 1.42e-72 243
Msa1257440 MtrunA17_Chr4g0003561 31.250 368 221 9 78 433 46 393 1.09e-50 179
Msa1257440 MtrunA17_Chr7g0220381 34.868 304 172 9 97 380 88 385 2.92e-45 169
Msa1257440 MtrunA17_Chr1g0146501 29.650 371 232 9 40 383 12 380 3.21e-42 160
Msa1257440 MtrunA17_Chr3g0127811 32.404 287 174 6 108 383 63 340 4.01e-40 151
Msa1257440 MtrunA17_Chr2g0298881 26.879 346 207 12 101 436 28 337 7.74e-27 112
Msa1257440 MtrunA17_Chr7g0240241 44.643 112 56 1 274 379 8 119 3.53e-24 98.2
Msa1257440 MtrunA17_Chr4g0002361 27.729 339 199 12 108 435 86 389 5.65e-24 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257440 AT4G16650.2 77.004 474 106 1 20 493 37 507 0.0 762
Msa1257440 AT4G16650.1 77.004 474 106 1 20 493 37 507 0.0 762
Msa1257440 AT1G76270.1 56.455 457 194 3 79 534 77 529 0.0 543
Msa1257440 AT1G20550.1 54.088 477 206 5 25 490 16 490 0.0 539
Msa1257440 AT4G38390.1 60.827 411 160 1 80 489 95 505 0.0 537
Msa1257440 AT1G14970.3 44.089 406 201 10 107 491 8 408 2.23e-108 330
Msa1257440 AT1G14970.2 44.089 406 201 10 107 491 34 434 5.13e-108 330
Msa1257440 AT2G01480.2 47.875 353 168 7 108 444 154 506 1.09e-106 330
Msa1257440 AT1G14970.1 44.089 406 201 10 107 491 154 554 2.63e-106 330
Msa1257440 AT2G01480.1 47.875 353 168 7 108 444 154 506 6.21e-106 329
Msa1257440 AT1G14020.1 42.356 399 217 6 104 490 87 484 4.57e-99 309
Msa1257440 AT1G35510.1 42.469 405 209 8 108 492 159 559 4.27e-98 308
Msa1257440 AT2G03280.1 42.462 398 215 7 104 488 84 480 5.07e-97 303
Msa1257440 AT5G64600.1 41.935 403 208 9 108 489 117 514 1.61e-96 303
Msa1257440 AT2G37980.1 38.990 495 258 17 35 497 141 623 1.16e-95 304
Msa1257440 AT1G22460.1 42.822 404 207 11 108 491 160 559 1.16e-95 302
Msa1257440 AT5G15740.1 43.501 377 205 6 101 470 99 474 4.40e-95 299
Msa1257440 AT3G54100.1 40.323 434 235 11 79 497 195 619 5.13e-94 300
Msa1257440 AT1G38065.2 43.514 370 190 8 108 460 26 393 1.86e-93 293
Msa1257440 AT1G38065.1 43.514 370 190 8 108 460 36 403 2.51e-93 293
Msa1257440 AT3G02250.1 43.236 377 206 6 101 470 99 474 2.89e-92 291
Msa1257440 AT1G38131.1 43.514 370 190 8 108 460 155 522 6.38e-92 293
Msa1257440 AT3G26370.1 40.441 408 215 10 105 490 155 556 9.54e-92 291
Msa1257440 AT2G03280.2 39.765 425 215 8 104 488 84 507 3.08e-91 289
Msa1257440 AT1G04910.1 41.860 387 217 5 79 460 61 444 1.58e-90 287
Msa1257440 AT5G35570.1 40.610 426 229 10 80 490 225 641 3.29e-90 290
Msa1257440 AT1G62330.1 38.614 404 199 9 109 464 222 624 2.35e-86 280
Msa1257440 AT1G11990.1 38.875 409 219 9 79 464 163 563 4.74e-84 272
Msa1257440 AT2G44500.1 40.674 386 218 6 111 489 180 561 3.34e-83 270
Msa1257440 AT5G01100.1 36.131 429 248 10 79 490 190 609 5.34e-82 268
Msa1257440 AT4G24530.1 36.345 476 257 16 55 490 48 517 6.15e-81 262
Msa1257440 AT1G29200.4 37.678 422 218 9 83 460 44 464 1.81e-79 258
Msa1257440 AT1G29200.1 37.678 422 218 9 83 460 44 464 1.81e-79 258
Msa1257440 AT1G29200.2 37.678 422 218 9 83 460 160 580 1.76e-78 258
Msa1257440 AT1G11990.2 35.650 446 219 10 79 464 148 585 1.78e-77 256
Msa1257440 AT1G29200.3 38.363 391 197 8 113 460 1 390 3.68e-76 247
Msa1257440 AT5G65470.1 34.956 452 245 14 79 489 59 502 7.95e-76 248
Msa1257440 AT3G07900.1 37.613 444 254 13 63 491 139 574 1.67e-75 249
Msa1257440 AT5G63390.1 37.824 386 229 7 111 489 167 548 9.41e-74 244
Msa1257440 AT1G52630.1 30.130 385 233 9 72 443 39 400 6.29e-50 178
Msa1257440 AT3G26370.2 41.395 215 114 4 105 309 155 367 1.00e-47 171
Msa1257440 AT3G30300.2 35.974 303 172 9 95 380 90 387 6.59e-47 174
Msa1257440 AT3G30300.1 35.974 303 172 9 95 380 90 387 6.59e-47 174
Msa1257440 AT2G44500.2 41.667 228 126 3 111 334 180 404 6.50e-45 164
Msa1257440 AT1G52630.2 30.120 332 199 7 124 443 2 312 7.06e-44 159
Msa1257440 AT3G03810.2 32.075 371 226 10 38 383 10 379 1.93e-43 164
Msa1257440 AT3G03810.1 32.075 371 226 10 38 383 10 379 1.93e-43 164
Msa1257440 AT3G21190.1 26.471 340 201 12 108 435 90 392 1.76e-23 103
Msa1257440 AT1G51630.1 24.706 340 207 11 108 435 91 393 1.10e-20 95.1

Find 184 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATGCGCCAATTGATATT+TGG 0.125119 8_2:-58074092 Msa1257440:CDS
ATGAACAAGAATGGGGATTT+TGG 0.208572 8_2:+58075023 None:intergenic
TGTATGTAACAGGCGATATA+TGG 0.223337 8_2:-58070567 Msa1257440:intron
TCACTCAATTCGTCTATAAA+TGG 0.225919 8_2:+58070353 None:intergenic
CGACTTCACCACACCCATTT+GGG 0.243600 8_2:+58074859 None:intergenic
GCTTAATATGTTCTCTCATT+TGG 0.246182 8_2:+58070230 None:intergenic
CCTGAAAATGCCAGCATATC+TGG 0.250790 8_2:+58071478 None:intergenic
CTTCTTTGCATTTGGTCTAA+TGG 0.257972 8_2:+58070532 None:intergenic
CTCGGGACACGCATGGTATA+TGG 0.258841 8_2:+58072235 None:intergenic
TAATTGGTTCATTAATTATC+TGG 0.271850 8_2:-58072320 Msa1257440:CDS
TTCATTTCCTCCGTTTATTT+CGG 0.275809 8_2:+58070274 None:intergenic
ATTAGATTTGGTTTGTTATT+CGG 0.295544 8_2:-58075287 Msa1257440:five_prime_UTR
TCAATTTAGATCCATGTATA+GGG 0.299524 8_2:-58070116 Msa1257440:three_prime_UTR
CTCAAGTCTTTAGAAGAAAA+AGG 0.303898 8_2:+58074968 None:intergenic
TACTTACCCCAGTTCTTTGT+TGG 0.313373 8_2:+58073224 None:intergenic
ATTGACCGCATGACCTTATC+TGG 0.317222 8_2:+58072268 None:intergenic
GCGCTAAGCTTCTTTGCATT+TGG 0.317689 8_2:+58070524 None:intergenic
CCACGCTTTCGTTCTCCGTC+AGG 0.330147 8_2:+58070960 None:intergenic
CGGCAAAGCAACTCAGTTAC+TGG 0.333215 8_2:-58069787 Msa1257440:three_prime_UTR
ATCTCCTTTGTATAGATGTT+GGG 0.341513 8_2:+58070801 None:intergenic
ATCGTCACCTGAATTAGATT+TGG 0.353653 8_2:-58075299 Msa1257440:five_prime_UTR
TCATGCGCCAATTGATATTT+GGG 0.356114 8_2:-58074091 Msa1257440:CDS
ACGACTTCACCACACCCATT+TGG 0.356500 8_2:+58074858 None:intergenic
GCTCTCCCATGAATCCTCTT+TGG 0.363004 8_2:+58070441 None:intergenic
TATGTTCTCTCATTTGGCTT+TGG 0.365917 8_2:+58070236 None:intergenic
TAACAAACCAAATCTAATTC+AGG 0.371361 8_2:+58075292 None:intergenic
TCGGGACACGCATGGTATAT+GGG 0.373647 8_2:+58072236 None:intergenic
AGCTTGGTGAAATCAGAAAA+AGG 0.385190 8_2:-58071420 Msa1257440:CDS
GAAGCTTAGCGCGCTGTTCA+TGG 0.386331 8_2:-58070513 Msa1257440:CDS
CCTTTCTCGAAAATGTATTC+CGG 0.393462 8_2:+58070474 None:intergenic
GGACTGAACCAACAAAGAAC+TGG 0.397018 8_2:-58073232 Msa1257440:CDS
CTCAATTTAGATCCATGTAT+AGG 0.397167 8_2:-58070117 Msa1257440:three_prime_UTR
TGGACGATTAGAGCTGGTTT+AGG 0.404354 8_2:-58069670 Msa1257440:three_prime_UTR
CTAAAACCCCATTGGAGAAT+GGG 0.407953 8_2:+58074926 None:intergenic
TTCACTGAACACACCTCAAA+TGG 0.408067 8_2:+58071805 None:intergenic
ATTGTGTTATGAACAAGAAT+GGG 0.409285 8_2:+58075015 None:intergenic
ACTTGATCAAGATAATATTC+AGG 0.409288 8_2:+58072202 None:intergenic
TATTGCACTTACTTTAGAAT+AGG 0.412673 8_2:+58075110 None:intergenic
TGAAATGAAGGTATGATAAG+TGG 0.412997 8_2:+58075159 None:intergenic
GGCGTGCCAAAGAGGATTCA+TGG 0.413721 8_2:-58070447 Msa1257440:CDS
TTTGGTCCCTTTCAAGTTGG+TGG 0.420304 8_2:-58070188 Msa1257440:three_prime_UTR
TGTGATTCCCAAATATCAAT+TGG 0.422550 8_2:+58074084 None:intergenic
GGAACTGACGCCGAAATAAA+CGG 0.425295 8_2:-58070284 Msa1257440:CDS
GAGAATTGCAAGAGCAACTT+TGG 0.426387 8_2:-58070206 Msa1257440:three_prime_UTR
TAGTTCATCATCAAGGTCAT+TGG 0.428900 8_2:+58071944 None:intergenic
CCCACTTCATGAGGAGTAAG+AGG 0.434476 8_2:+58070930 None:intergenic
GTTCATGGCGAGGCATGAAA+TGG 0.434734 8_2:-58070498 Msa1257440:CDS
TGATTTCATTCATTGCCAAT+TGG 0.435248 8_2:-58075260 Msa1257440:five_prime_UTR
AGAGGATTCATGGGAGAGCC+AGG 0.436961 8_2:-58070437 Msa1257440:CDS
GAAAATGAAACAAGACCAAT+TGG 0.438044 8_2:+58075245 None:intergenic
CATCTCCTTTGTATAGATGT+TGG 0.438548 8_2:+58070800 None:intergenic
AATTGTGTTATGAACAAGAA+TGG 0.439173 8_2:+58075014 None:intergenic
GTTATATAGCAGTCCATTTG+AGG 0.440662 8_2:-58071818 Msa1257440:intron
CACGCTTTCGTTCTCCGTCA+GGG 0.449075 8_2:+58070961 None:intergenic
ACATACCTGTATGTTGCATC+GGG 0.449719 8_2:-58070873 Msa1257440:CDS
AATAATGCCACCAACTTGAA+AGG 0.450326 8_2:+58070181 None:intergenic
CGTCCAGCTTTCATCTCTCC+TGG 0.453678 8_2:+58070419 None:intergenic
TTCATTGTGAGCTCAGCTAT+AGG 0.454563 8_2:-58070032 Msa1257440:intron
AACATGGCCAGGATTCTTGC+TGG 0.456728 8_2:-58070669 Msa1257440:CDS
TCTAAAACCCCATTGGAGAA+TGG 0.456883 8_2:+58074925 None:intergenic
CACATACCTGTATGTTGCAT+CGG 0.462028 8_2:-58070874 Msa1257440:CDS
GCATTTAGAAATCTGACAAT+AGG 0.464250 8_2:-58070305 Msa1257440:CDS
GAAATGAAGGTATGATAAGT+GGG 0.465770 8_2:+58075160 None:intergenic
ACGTTGTTTCTCATCTTGAA+TGG 0.468318 8_2:-58074709 Msa1257440:CDS
CAGGTTTGAGCCAGATATGC+TGG 0.469168 8_2:-58071488 Msa1257440:CDS
TATTCAGGATCTGATTTCCT+CGG 0.470623 8_2:+58072217 None:intergenic
AGATTTCTAAATGCGAGCTT+AGG 0.471285 8_2:+58070314 None:intergenic
ATACGCGAGCGCATGTCAAA+TGG 0.471651 8_2:-58073280 Msa1257440:CDS
AGATAAGGTCATGCGGTCAA+TGG 0.476341 8_2:-58072266 Msa1257440:CDS
TATAAATAATAATGAAATGA+AGG 0.476717 8_2:+58075147 None:intergenic
CCTTTGACCAGCAAGAATCC+TGG 0.479961 8_2:+58070662 None:intergenic
GTTGGTGGCATTATTAAACT+TGG 0.480356 8_2:-58070173 Msa1257440:three_prime_UTR
ACAATGCCCCATTCTCCAAT+GGG 0.481367 8_2:-58074933 Msa1257440:five_prime_UTR
CTACTACGGATGCAAAGAAA+GGG 0.482045 8_2:-58074049 Msa1257440:CDS
TTCTTCAAGTGCAACGATGA+TGG 0.486237 8_2:-58069822 Msa1257440:three_prime_UTR
TTCTCACAGACACAAGTGCT+TGG 0.492215 8_2:+58070377 None:intergenic
GTAATCAACAGCAGCTAGGC+GGG 0.492518 8_2:+58070737 None:intergenic
CGGGACACGCATGGTATATG+GGG 0.492983 8_2:+58072237 None:intergenic
TTCAAAATCTAAAACCCCAT+TGG 0.495443 8_2:+58074918 None:intergenic
ACTACTACGGATGCAAAGAA+AGG 0.497464 8_2:-58074050 Msa1257440:CDS
CACTTACTTTAGAATAGGAT+CGG 0.498801 8_2:+58075115 None:intergenic
ATTCAGGATCTGATTTCCTC+GGG 0.501133 8_2:+58072218 None:intergenic
AAAAGGTTTCAATTCTTCCT+CGG 0.501153 8_2:+58070773 None:intergenic
AATTGAGTGAAGATGGAATC+CGG 0.501267 8_2:-58070340 Msa1257440:CDS
ATAATGCCACCAACTTGAAA+GGG 0.502180 8_2:+58070182 None:intergenic
TGTAATGAGGATGCGAAAGA+TGG 0.508686 8_2:-58071847 Msa1257440:CDS
AACTTTGGTCCCTTTCAAGT+TGG 0.509880 8_2:-58070191 Msa1257440:three_prime_UTR
TTGTTATGGCTTGAACGGAT+TGG 0.510891 8_2:-58069735 Msa1257440:three_prime_UTR
GTATGTAACAGGCGATATAT+GGG 0.511833 8_2:-58070566 Msa1257440:intron
ATAGACGAATTGAGTGAAGA+TGG 0.512145 8_2:-58070347 Msa1257440:CDS
TAAATGCGAGCTTAGGTGGC+CGG 0.513190 8_2:+58070321 None:intergenic
ATTCCATGGTCGGTCATTTG+CGG 0.516284 8_2:-58074776 Msa1257440:CDS
GAGCCAGGAGAGATGAAAGC+TGG 0.520156 8_2:-58070422 Msa1257440:CDS
ACCCGTCGTCTCAAGAGTAT+TGG 0.523710 8_2:+58072175 None:intergenic
ACAACAACGGTAACATGGCC+AGG 0.529185 8_2:-58070680 Msa1257440:CDS
CGGGAAGAGAATGAAAGAAA+AGG 0.531327 8_2:+58070756 None:intergenic
GCTTATATCAATCTCGGCAA+TGG 0.532044 8_2:-58069690 Msa1257440:three_prime_UTR
TACAATGCCCCATTCTCCAA+TGG 0.533480 8_2:-58074934 Msa1257440:five_prime_UTR
TGTTAAAAGAGTTCCAGATA+AGG 0.534714 8_2:-58072281 Msa1257440:CDS
ACAAAACCAATACGACAACT+TGG 0.536194 8_2:-58071879 Msa1257440:CDS
TTGCTTATTGCCGCGAGCGG+AGG 0.537115 8_2:-58073253 Msa1257440:CDS
GGTTTGATGCTGCGAGCGCT+TGG 0.537934 8_2:-58070909 Msa1257440:CDS
CCAATTAACATCGAAAATGT+TGG 0.538007 8_2:+58072336 None:intergenic
TCCTCTTACTCCTCATGAAG+TGG 0.539526 8_2:-58070931 Msa1257440:CDS
CCTCTTACTCCTCATGAAGT+GGG 0.541378 8_2:-58070930 Msa1257440:CDS
TTTCTAAATGCGAGCTTAGG+TGG 0.543183 8_2:+58070317 None:intergenic
TTCGAGATCCATTCCATGGT+CGG 0.545811 8_2:-58074786 Msa1257440:CDS
GACTGAACCAACAAAGAACT+GGG 0.546290 8_2:-58073231 Msa1257440:CDS
GCCAATACTCTTGAGACGAC+GGG 0.549625 8_2:-58072176 Msa1257440:intron
CCAGGATTCTTGCTGGTCAA+AGG 0.549818 8_2:-58070662 Msa1257440:intron
ATGTGGGCTTATATCAATCT+CGG 0.550508 8_2:-58069696 Msa1257440:three_prime_UTR
TTGGTTCAGTCCTCCGCTCG+CGG 0.550953 8_2:+58073243 None:intergenic
GCACTTGGTTTGAGTCATGT+TGG 0.551582 8_2:+58069880 None:intergenic
CATATCTATAAACATTTGCA+AGG 0.551643 8_2:+58070068 None:intergenic
TCAAATGGACTGCTATATAA+CGG 0.554034 8_2:+58071820 None:intergenic
GCAAATGACCGACCATGGAA+TGG 0.559030 8_2:+58074778 None:intergenic
TACGTACTTTCCCCTATACA+TGG 0.559264 8_2:+58070105 None:intergenic
TGGCGAGGCATGAAATGGAC+CGG 0.559422 8_2:-58070493 Msa1257440:CDS
CGGCAATGGACGATTAGAGC+TGG 0.559423 8_2:-58069676 Msa1257440:three_prime_UTR
GATGATGGTCTCTATTTCAT+CGG 0.560662 8_2:-58069807 Msa1257440:three_prime_UTR
GTTAGAGTGAGTGTGGTTCG+TGG 0.562414 8_2:+58074826 None:intergenic
TCTCCTTTGTATAGATGTTG+GGG 0.562630 8_2:+58070802 None:intergenic
GAGCTCCAGCTTGCTGTAGG+TGG 0.563803 8_2:+58069851 None:intergenic
AAACCGCAAATGACCGACCA+TGG 0.565822 8_2:+58074773 None:intergenic
CAATATTCTAAATACTACTA+CGG 0.567932 8_2:-58074063 Msa1257440:CDS
TGTAGGTGGTATAATGCACT+TGG 0.570011 8_2:+58069865 None:intergenic
GCGTGCCAAAGAGGATTCAT+GGG 0.571444 8_2:-58070446 Msa1257440:CDS
CTGATGCTGTTGTTGTTGCA+CGG 0.572212 8_2:-58072571 Msa1257440:CDS
AATCTTGTTATATGCTGTGA+TGG 0.573882 8_2:-58070140 Msa1257440:three_prime_UTR
CCGCAGTTTCTTCTCTACAC+TGG 0.574458 8_2:-58074666 Msa1257440:intron
CAATGTAATCAACAGCAGCT+AGG 0.577338 8_2:+58070733 None:intergenic
AAGATCTCTGAGAGGCTGCA+TGG 0.577808 8_2:+58070827 None:intergenic
TTAGCGCGCTGTTCATGGCG+AGG 0.577856 8_2:-58070508 Msa1257440:CDS
TGCTAACAACAACGGTAACA+TGG 0.579524 8_2:-58070685 Msa1257440:CDS
GCGTCACATGAGGCTACATG+TGG 0.581233 8_2:-58069713 Msa1257440:three_prime_UTR
TGGAATGGATCTCGAACAGA+TGG 0.584319 8_2:+58074793 None:intergenic
TACTTGCTTATTGCCGCGAG+CGG 0.584367 8_2:-58073256 Msa1257440:CDS
GAAGAGCTCCAGCTTGCTGT+AGG 0.585222 8_2:+58069848 None:intergenic
GAACGGATTGGCGTCACATG+AGG 0.585749 8_2:-58069723 Msa1257440:three_prime_UTR
TTTGTGACAAAACCCCAAAT+GGG 0.586008 8_2:-58074872 Msa1257440:exon
AAGATGAGAAACAACGTGAC+CGG 0.587152 8_2:+58074715 None:intergenic
TTGTGTTATGAACAAGAATG+GGG 0.587821 8_2:+58075016 None:intergenic
GGAGAGATGAAAGCTGGACG+AGG 0.589299 8_2:-58070416 Msa1257440:CDS
TTATACCACCTACAGCAAGC+TGG 0.590274 8_2:-58069856 Msa1257440:three_prime_UTR
TGCCAATACTCTTGAGACGA+CGG 0.593501 8_2:-58072177 Msa1257440:CDS
TCTGTTCGAGATCCATTCCA+TGG 0.594173 8_2:-58074790 Msa1257440:CDS
AGCATCAAACCCACTTCATG+AGG 0.596281 8_2:+58070921 None:intergenic
TAAAACCCCATTGGAGAATG+GGG 0.597995 8_2:+58074927 None:intergenic
AAGCCATAACAAAACGACCT+TGG 0.599910 8_2:+58069746 None:intergenic
CAGAGAACTATGAATACGAA+AGG 0.603495 8_2:+58075223 None:intergenic
TGATTTCCTCGGGACACGCA+TGG 0.609508 8_2:+58072228 None:intergenic
ATACAGGATTTGAGCCCTGA+CGG 0.612438 8_2:-58070975 Msa1257440:intron
GACTTCACCACACCCATTTG+GGG 0.613598 8_2:+58074860 None:intergenic
AAATGAAGGTATGATAAGTG+GGG 0.614612 8_2:+58075161 None:intergenic
CACACTTGTTGTACCTGAGT+TGG 0.618209 8_2:-58072537 Msa1257440:CDS
ATACCTGTATGTTGCATCGG+GGG 0.619931 8_2:-58070871 Msa1257440:CDS
AAAGAATTATGATCCAACTC+AGG 0.620218 8_2:+58072524 None:intergenic
AAGGTAAAGGCGTGCCAAAG+AGG 0.620555 8_2:-58070455 Msa1257440:CDS
TTTCCCCAACATCTATACAA+AGG 0.622108 8_2:-58070805 Msa1257440:CDS
CAATTTAGATCCATGTATAG+GGG 0.626244 8_2:-58070115 Msa1257440:three_prime_UTR
CCTGACGGAGAACGAAAGCG+TGG 0.628749 8_2:-58070960 Msa1257440:CDS
GAGAATGGGGCATTGTAGTG+TGG 0.634336 8_2:+58074940 None:intergenic
GTATTTGTTGCTAACAACAA+CGG 0.634873 8_2:-58070693 Msa1257440:CDS
GACAAAACCCCAAATGGGTG+TGG 0.644598 8_2:-58074867 Msa1257440:exon
AAATGGGTGTGGTGAAGTCG+TGG 0.645174 8_2:-58074856 Msa1257440:CDS
TACAAAGGAGATGCTTGCCG+AGG 0.652331 8_2:-58070790 Msa1257440:CDS
CATATACCATGCGTGTCCCG+AGG 0.654449 8_2:-58072234 Msa1257440:CDS
TGTAATCAACAGCAGCTAGG+CGG 0.658178 8_2:+58070736 None:intergenic
ATATCTATAAACATTTGCAA+GGG 0.665419 8_2:+58070069 None:intergenic
AATGAAGGTATGATAAGTGG+GGG 0.670531 8_2:+58075162 None:intergenic
CGTCACATGAGGCTACATGT+GGG 0.672293 8_2:-58069712 Msa1257440:three_prime_UTR
CAACTCAGGTACAACAAGTG+TGG 0.676378 8_2:+58072538 None:intergenic
TACTACGGATGCAAAGAAAG+GGG 0.685798 8_2:-58074048 Msa1257440:CDS
TCAAAGCATGATAATTAACA+CGG 0.686663 8_2:+58071907 None:intergenic
CTGACGGAGAACGAAAGCGT+GGG 0.689450 8_2:-58070959 Msa1257440:CDS
GAGTTCCAGATAAGGTCATG+CGG 0.704682 8_2:-58072273 Msa1257440:CDS
CAATGCCCCATTCTCCAATG+GGG 0.710397 8_2:-58074932 Msa1257440:five_prime_UTR
GGGACACGCATGGTATATGG+GGG 0.711401 8_2:+58072238 None:intergenic
CATACCTGTATGTTGCATCG+GGG 0.711632 8_2:-58070872 Msa1257440:CDS
TTGGGGAAAAGATCTCTGAG+AGG 0.727453 8_2:+58070819 None:intergenic
ACTGACGCCGAAATAAACGG+AGG 0.750065 8_2:-58070281 Msa1257440:CDS
CCAGTGTAGAGAAGAAACTG+CGG 0.760750 8_2:+58074666 None:intergenic
ACTGAACCAACAAAGAACTG+GGG 0.763615 8_2:-58073230 Msa1257440:intron
ATGTGTGTACGAGATGACCA+AGG 0.776685 8_2:-58069763 Msa1257440:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAATAATAATGAAATGA+AGG + chr8_2:58069787-58069806 None:intergenic 10.0%
!! TAACATAATAATGAATAAAA+GGG + chr8_2:58070304-58070323 None:intergenic 10.0%
!! TATATATAACATAATTAGAA+AGG + chr8_2:58071425-58071444 None:intergenic 10.0%
!! AAATAAAACAAAGTATAAAA+TGG + chr8_2:58071537-58071556 None:intergenic 10.0%
!!! TTGTGTAAAAATATAATTTT+AGG - chr8_2:58073697-58073716 Msa1257440:intron 10.0%
!!! TTATATTAATTTTTCAAACA+AGG + chr8_2:58074310-58074329 None:intergenic 10.0%
!!! ATATAAATTTTGTTTGATAA+AGG - chr8_2:58074324-58074343 Msa1257440:intron 10.0%
!! GTAACATAATAATGAATAAA+AGG + chr8_2:58070305-58070324 None:intergenic 15.0%
!! CAATCAATATATAATTAGAA+AGG + chr8_2:58071393-58071412 None:intergenic 15.0%
!! AATATTAACAAATTGTCTAT+GGG + chr8_2:58071561-58071580 None:intergenic 15.0%
!!! ATAGACAATTTGTTAATATT+GGG - chr8_2:58071561-58071580 Msa1257440:intron 15.0%
!! GAAATAACATTACTTTAATT+TGG + chr8_2:58072304-58072323 None:intergenic 15.0%
!!! TTAAAGTAATGTTATTTCTA+TGG - chr8_2:58072306-58072325 Msa1257440:CDS 15.0%
!!! AATTTGCATATTGTTTTATA+CGG - chr8_2:58072447-58072466 Msa1257440:intron 15.0%
!! AGTTATAATGTATTACAAAA+AGG + chr8_2:58072532-58072551 None:intergenic 15.0%
!!! AAAAATATAATTTTAGGTGT+TGG - chr8_2:58073703-58073722 Msa1257440:intron 15.0%
!!! ATTAGATTTGGTTTGTTATT+CGG - chr8_2:58069644-58069663 Msa1257440:three_prime_UTR 20.0%
!!! TGTAATTGATGTGAATTTTT+TGG - chr8_2:58070803-58070822 Msa1257440:CDS 20.0%
!! CAATATTCTAAATACTACTA+CGG - chr8_2:58070868-58070887 Msa1257440:CDS 20.0%
!!! AATGAAAATGACTCAAATTT+TGG + chr8_2:58071027-58071046 None:intergenic 20.0%
!! CAATATTAACAAATTGTCTA+TGG + chr8_2:58071562-58071581 None:intergenic 20.0%
!!! CATAGACAATTTGTTAATAT+TGG - chr8_2:58071560-58071579 Msa1257440:intron 20.0%
!! ATGGATAAGTTTAATGTATA+TGG - chr8_2:58071798-58071817 Msa1257440:intron 20.0%
!! TATCAAATTATTATCGATGT+CGG + chr8_2:58072058-58072077 None:intergenic 20.0%
!! GATAAAATCACATAATTCAA+TGG - chr8_2:58072074-58072093 Msa1257440:intron 20.0%
!!! TAATTGGTTCATTAATTATC+TGG - chr8_2:58072611-58072630 Msa1257440:intron 20.0%
!! AAATTTAAATTCCATACACA+AGG + chr8_2:58073152-58073171 None:intergenic 20.0%
!!! TTAAATTTAACTTCCATCAA+AGG - chr8_2:58073164-58073183 Msa1257440:intron 20.0%
!! CATTATAATAGCAATATGTA+AGG - chr8_2:58073374-58073393 Msa1257440:intron 20.0%
!!! AGTAGTTTTTCAAAATAATC+TGG - chr8_2:58073809-58073828 Msa1257440:intron 20.0%
!!! ATATAACAAGATTTTCATCA+TGG + chr8_2:58074784-58074803 None:intergenic 20.0%
!! ATATCTATAAACATTTGCAA+GGG + chr8_2:58074865-58074884 None:intergenic 20.0%
! TAACAAACCAAATCTAATTC+AGG + chr8_2:58069642-58069661 None:intergenic 25.0%
!!! TATTGCACTTACTTTAGAAT+AGG + chr8_2:58069824-58069843 None:intergenic 25.0%
! ATTGTGTTATGAACAAGAAT+GGG + chr8_2:58069919-58069938 None:intergenic 25.0%
! AATTGTGTTATGAACAAGAA+TGG + chr8_2:58069920-58069939 None:intergenic 25.0%
! GAAAAAGGAATCTTGATTTA+GGG + chr8_2:58069951-58069970 None:intergenic 25.0%
! AGAAAAAGGAATCTTGATTT+AGG + chr8_2:58069952-58069971 None:intergenic 25.0%
!! ATTGATGAAGATTTTGTGTT+TGG - chr8_2:58070035-58070054 Msa1257440:three_prime_UTR 25.0%
! CATATAAGTGCTTATGTATA+AGG - chr8_2:58070388-58070407 Msa1257440:CDS 25.0%
! CATCAATTACACAACATATT+TGG + chr8_2:58070794-58070813 None:intergenic 25.0%
!!! ATTGATGTGAATTTTTTGGT+AGG - chr8_2:58070807-58070826 Msa1257440:CDS 25.0%
!! TTGTGTTTGCTAACTAAAAA+TGG - chr8_2:58070946-58070965 Msa1257440:CDS 25.0%
! AAAATCATACATACATGTCA+AGG + chr8_2:58070974-58070993 None:intergenic 25.0%
!! ATCAGTCTAAAATTACCATT+AGG + chr8_2:58071118-58071137 None:intergenic 25.0%
!!! GTAATTTTAGACTGATTTCA+AGG - chr8_2:58071122-58071141 Msa1257440:intron 25.0%
! AATAATATCTTCACTGCTTT+AGG - chr8_2:58071214-58071233 Msa1257440:intron 25.0%
! TATATATATTGCTTCAAAGC+CGG - chr8_2:58071439-58071458 Msa1257440:CDS 25.0%
! TTCTATCTCATTATGGTAAT+TGG - chr8_2:58071614-58071633 Msa1257440:intron 25.0%
! GATAAGTTTAATGTATATGG+AGG - chr8_2:58071801-58071820 Msa1257440:intron 25.0%
!! TTTTCTTGATTTCAATCAGT+AGG + chr8_2:58071844-58071863 None:intergenic 25.0%
!! TACTGATTGAAATCAAGAAA+AGG - chr8_2:58071843-58071862 Msa1257440:CDS 25.0%
! TCTTCAAAAACAACTGAAAA+AGG + chr8_2:58071901-58071920 None:intergenic 25.0%
! TGTCTTAATTAGATTACACT+AGG + chr8_2:58072244-58072263 None:intergenic 25.0%
!! AGTTGGATCATAATTCTTTT+TGG - chr8_2:58072411-58072430 Msa1257440:intron 25.0%
! ACTTGATCAAGATAATATTC+AGG + chr8_2:58072732-58072751 None:intergenic 25.0%
! TCAAAGCATGATAATTAACA+CGG + chr8_2:58073027-58073046 None:intergenic 25.0%
! TTGGTCAAAAAATTGTAATG+AGG - chr8_2:58073071-58073090 Msa1257440:intron 25.0%
! TCATGATCTATGATGATTTA+TGG - chr8_2:58073418-58073437 Msa1257440:intron 25.0%
!!! GGTAAAGAAATAACTAGTTT+TGG + chr8_2:58073901-58073920 None:intergenic 25.0%
! TCAATTTAGATCCATGTATA+GGG - chr8_2:58074815-58074834 Msa1257440:CDS 25.0%
! CATATCTATAAACATTTGCA+AGG + chr8_2:58074866-58074885 None:intergenic 25.0%
! TATTTAGTATTTAAGTCGTC+AGG + chr8_2:58074988-58075007 None:intergenic 25.0%
! GACGACTTAAATACTAAATA+TGG - chr8_2:58074988-58075007 Msa1257440:five_prime_UTR 25.0%
TGATTTCATTCATTGCCAAT+TGG - chr8_2:58069671-58069690 Msa1257440:three_prime_UTR 30.0%
GAAAATGAAACAAGACCAAT+TGG + chr8_2:58069689-58069708 None:intergenic 30.0%
! AAATGAAGGTATGATAAGTG+GGG + chr8_2:58069773-58069792 None:intergenic 30.0%
! GAAATGAAGGTATGATAAGT+GGG + chr8_2:58069774-58069793 None:intergenic 30.0%
! TGAAATGAAGGTATGATAAG+TGG + chr8_2:58069775-58069794 None:intergenic 30.0%
!! CACTTACTTTAGAATAGGAT+CGG + chr8_2:58069819-58069838 None:intergenic 30.0%
!! ATGGGGATTTTGGTATTTTT+TGG + chr8_2:58069901-58069920 None:intergenic 30.0%
TTGTGTTATGAACAAGAATG+GGG + chr8_2:58069918-58069937 None:intergenic 30.0%
! CTCAAGTCTTTAGAAGAAAA+AGG + chr8_2:58069966-58069985 None:intergenic 30.0%
! TTCAAAATCTAAAACCCCAT+TGG + chr8_2:58070016-58070035 None:intergenic 30.0%
! AACATAATGGCTTAAGGTTT+TGG - chr8_2:58070656-58070675 Msa1257440:intron 30.0%
! ACATAATGGCTTAAGGTTTT+GGG - chr8_2:58070657-58070676 Msa1257440:intron 30.0%
!!! ATGTGAATTTTTTGGTAGGA+TGG - chr8_2:58070811-58070830 Msa1257440:CDS 30.0%
TGTGATTCCCAAATATCAAT+TGG + chr8_2:58070850-58070869 None:intergenic 30.0%
!! ATGAAGCTTTATTTGCCTAA+TGG - chr8_2:58071100-58071119 Msa1257440:intron 30.0%
TTAGGATAGATTACATCAGT+AGG - chr8_2:58071232-58071251 Msa1257440:intron 30.0%
TGAGTTTAGATCATGTTAAG+GGG + chr8_2:58071330-58071349 None:intergenic 30.0%
CTGAGTTTAGATCATGTTAA+GGG + chr8_2:58071331-58071350 None:intergenic 30.0%
ACTGAGTTTAGATCATGTTA+AGG + chr8_2:58071332-58071351 None:intergenic 30.0%
TTAACATGATCTAAACTCAG+TGG - chr8_2:58071331-58071350 Msa1257440:intron 30.0%
! ATTTTCTCATAGCAGTGTAA+TGG + chr8_2:58071505-58071524 None:intergenic 30.0%
!! TGTCACTTTCTATCTCATTA+TGG - chr8_2:58071607-58071626 Msa1257440:intron 30.0%
AAAGAATTATGATCCAACTC+AGG + chr8_2:58072410-58072429 None:intergenic 30.0%
! GGATCATAATTCTTTTTGGA+AGG - chr8_2:58072415-58072434 Msa1257440:intron 30.0%
GAAGTCACTGTATTACAAAA+AGG + chr8_2:58072574-58072593 None:intergenic 30.0%
CCAATTAACATCGAAAATGT+TGG + chr8_2:58072598-58072617 None:intergenic 30.0%
! CCAACATTTTCGATGTTAAT+TGG - chr8_2:58072595-58072614 Msa1257440:intron 30.0%
TGTTAAAAGAGTTCCAGATA+AGG - chr8_2:58072650-58072669 Msa1257440:intron 30.0%
!! TCAGTTTTGATAACTCCTTT+TGG - chr8_2:58072889-58072908 Msa1257440:intron 30.0%
!! CAGATTTTTCGGTATTTTAC+AGG - chr8_2:58072931-58072950 Msa1257440:intron 30.0%
! GTTTTTGTAGTTCATCATCA+AGG + chr8_2:58072997-58073016 None:intergenic 30.0%
!! TCAAATGGACTGCTATATAA+CGG + chr8_2:58073114-58073133 None:intergenic 30.0%
TATAGGGATGAGATCATATA+TGG + chr8_2:58073242-58073261 None:intergenic 30.0%
GATAAAGGAGTTGTGAAAAT+GGG + chr8_2:58073294-58073313 None:intergenic 30.0%
TGATAAAGGAGTTGTGAAAA+TGG + chr8_2:58073295-58073314 None:intergenic 30.0%
TCAATTTCAGACAGTGATAA+AGG + chr8_2:58073309-58073328 None:intergenic 30.0%
GATCATGAGAATTCAAACAT+TGG + chr8_2:58073406-58073425 None:intergenic 30.0%
!!! GCATTTTCAGGTTGTTATTT+TGG - chr8_2:58073465-58073484 Msa1257440:intron 30.0%
!!! TTTTCAGGTTGTTATTTTGG+TGG - chr8_2:58073468-58073487 Msa1257440:intron 30.0%
!!! TTTCAGGTTGTTATTTTGGT+GGG - chr8_2:58073469-58073488 Msa1257440:intron 30.0%
! GTTTTGTCAGTAGAAATCAT+AGG + chr8_2:58073565-58073584 None:intergenic 30.0%
TATTGTCAGTGGAAATGATA+TGG + chr8_2:58073587-58073606 None:intergenic 30.0%
TGTATTATTGCAAGAGGTAA+TGG + chr8_2:58073941-58073960 None:intergenic 30.0%
ATTACCTCTTGCAATAATAC+AGG - chr8_2:58073940-58073959 Msa1257440:intron 30.0%
AAATCCTGTATTATTGCAAG+AGG + chr8_2:58073947-58073966 None:intergenic 30.0%
ATCTCCTTTGTATAGATGTT+GGG + chr8_2:58074133-58074152 None:intergenic 30.0%
AAAAGGTTTCAATTCTTCCT+CGG + chr8_2:58074161-58074180 None:intergenic 30.0%
! GTATTTGTTGCTAACAACAA+CGG - chr8_2:58074238-58074257 Msa1257440:intron 30.0%
GATTTCTTCTTGTATGTAAC+AGG - chr8_2:58074354-58074373 Msa1257440:intron 30.0%
!! TACATTTTCGAGAAAGGTAA+AGG - chr8_2:58074463-58074482 Msa1257440:intron 30.0%
TCACTCAATTCGTCTATAAA+TGG + chr8_2:58074581-58074600 None:intergenic 30.0%
TTCATTTCCTCCGTTTATTT+CGG + chr8_2:58074660-58074679 None:intergenic 30.0%
GCTTAATATGTTCTCTCATT+TGG + chr8_2:58074704-58074723 None:intergenic 30.0%
! AATCTTGTTATATGCTGTGA+TGG - chr8_2:58074791-58074810 Msa1257440:CDS 30.0%
CTCAATTTAGATCCATGTAT+AGG - chr8_2:58074814-58074833 Msa1257440:CDS 30.0%
CAATTTAGATCCATGTATAG+GGG - chr8_2:58074816-58074835 Msa1257440:CDS 30.0%
CAGAGAACTATGAATACGAA+AGG + chr8_2:58069711-58069730 None:intergenic 35.0%
! AATGAAGGTATGATAAGTGG+GGG + chr8_2:58069772-58069791 None:intergenic 35.0%
! ATGAACAAGAATGGGGATTT+TGG + chr8_2:58069911-58069930 None:intergenic 35.0%
! TTTTGTGACAAAACCCCAAA+TGG - chr8_2:58070058-58070077 Msa1257440:three_prime_UTR 35.0%
TTTGTGACAAAACCCCAAAT+GGG - chr8_2:58070059-58070078 Msa1257440:three_prime_UTR 35.0%
! ATTTGCGGTTTCATGCTTTT+CGG - chr8_2:58070170-58070189 Msa1257440:three_prime_UTR 35.0%
! GGTCTCATTTCTCTTTTAAC+CGG - chr8_2:58070197-58070216 Msa1257440:three_prime_UTR 35.0%
!! ACGTTGTTTCTCATCTTGAA+TGG - chr8_2:58070222-58070241 Msa1257440:exon 35.0%
!! TGCTTTTTGTATTGCCAATG+TGG - chr8_2:58070336-58070355 Msa1257440:CDS 35.0%
ATTCCTATTGTAGACCACAT+TGG + chr8_2:58070353-58070372 None:intergenic 35.0%
CTTATTTCCATAAGTGCTAC+AGG + chr8_2:58070473-58070492 None:intergenic 35.0%
GAGAAGACTCACAAACATAA+TGG - chr8_2:58070643-58070662 Msa1257440:intron 35.0%
CTCACAAACATAATGGCTTA+AGG - chr8_2:58070650-58070669 Msa1257440:intron 35.0%
!!! TAAGGTTTTGGGTAAAGATG+TGG - chr8_2:58070668-58070687 Msa1257440:CDS 35.0%
TGGTGTACAATTCACTTGTA+TGG - chr8_2:58070688-58070707 Msa1257440:CDS 35.0%
ATTCACTTGTATGGTTGCTT+TGG - chr8_2:58070697-58070716 Msa1257440:CDS 35.0%
! TTCACTTGTATGGTTGCTTT+GGG - chr8_2:58070698-58070717 Msa1257440:CDS 35.0%
AAACTTATCTACTGACGACT+GGG + chr8_2:58070759-58070778 None:intergenic 35.0%
TAAACTTATCTACTGACGAC+TGG + chr8_2:58070760-58070779 None:intergenic 35.0%
ATCATGCGCCAATTGATATT+TGG - chr8_2:58070839-58070858 Msa1257440:CDS 35.0%
TCATGCGCCAATTGATATTT+GGG - chr8_2:58070840-58070859 Msa1257440:CDS 35.0%
AAAAACAGCACATAGCAACA+TGG + chr8_2:58071162-58071181 None:intergenic 35.0%
!! GATTTTTAATTACACCGTCG+TGG - chr8_2:58071775-58071794 Msa1257440:intron 35.0%
TTAAACTTATCCATCCACGA+CGG + chr8_2:58071792-58071811 None:intergenic 35.0%
!!! AGTTGTTTTTGAAGAATGCG+AGG - chr8_2:58071906-58071925 Msa1257440:CDS 35.0%
!! CTAGTTCTATCGATATCATC+AGG + chr8_2:58071959-58071978 None:intergenic 35.0%
TGGAATCATATGTGTCATGT+CGG - chr8_2:58072094-58072113 Msa1257440:intron 35.0%
CACTAGGCTCTATTAACAAT+AGG + chr8_2:58072228-58072247 None:intergenic 35.0%
!! ATTCTTTTTGGAAGGATGAC+AGG - chr8_2:58072423-58072442 Msa1257440:intron 35.0%
TATTCAGGATCTGATTTCCT+CGG + chr8_2:58072717-58072736 None:intergenic 35.0%
!!! CTCCTTTTGGAATTCAATTG+TGG - chr8_2:58072902-58072921 Msa1257440:intron 35.0%
CACCACAATTGAATTCCAAA+AGG + chr8_2:58072907-58072926 None:intergenic 35.0%
!!! CTTTTGGAATTCAATTGTGG+TGG - chr8_2:58072905-58072924 Msa1257440:intron 35.0%
! TGTGGTGGTAACAGATTTTT+CGG - chr8_2:58072920-58072939 Msa1257440:intron 35.0%
TAGTTCATCATCAAGGTCAT+TGG + chr8_2:58072990-58073009 None:intergenic 35.0%
ACAAAACCAATACGACAACT+TGG - chr8_2:58073052-58073071 Msa1257440:intron 35.0%
! TTTTGACCAAGTTGTCGTAT+TGG + chr8_2:58073061-58073080 None:intergenic 35.0%
GTTATATAGCAGTCCATTTG+AGG - chr8_2:58073113-58073132 Msa1257440:intron 35.0%
TGGACAACATGTATGTCATA+AGG + chr8_2:58073222-58073241 None:intergenic 35.0%
! GATCTCATCCCTATATCTTT+TGG - chr8_2:58073247-58073266 Msa1257440:CDS 35.0%
CAGACACACCAAAAGATATA+GGG + chr8_2:58073258-58073277 None:intergenic 35.0%
TCTATGATGATTTATGGCAC+AGG - chr8_2:58073424-58073443 Msa1257440:intron 35.0%
!!! TTCAGGTTGTTATTTTGGTG+GGG - chr8_2:58073470-58073489 Msa1257440:intron 35.0%
GAAAAAGAAAGACAAGAGCT+TGG - chr8_2:58073495-58073514 Msa1257440:intron 35.0%
! AGCTTGGTGAAATCAGAAAA+AGG - chr8_2:58073511-58073530 Msa1257440:intron 35.0%
TTGGTGAAATCAGAAAAAGG+TGG - chr8_2:58073514-58073533 Msa1257440:intron 35.0%
! TCATAGGATTGTAGTCTTAC+AGG + chr8_2:58073549-58073568 None:intergenic 35.0%
AAAGGAGAAACTATTGTCAG+TGG + chr8_2:58073598-58073617 None:intergenic 35.0%
! TTTCTCCTTTTATCACCCAT+GGG - chr8_2:58073608-58073627 Msa1257440:intron 35.0%
AATAGATCCTTGAACAAGTC+AGG + chr8_2:58073642-58073661 None:intergenic 35.0%
!!! GGTGTTGGTTTTATAAGTAG+AGG - chr8_2:58073718-58073737 Msa1257440:intron 35.0%
ATGGCTCATTCACTTGATAT+TGG + chr8_2:58073922-58073941 None:intergenic 35.0%
TTTCCCCAACATCTATACAA+AGG - chr8_2:58074126-58074145 Msa1257440:intron 35.0%
TCTCCTTTGTATAGATGTTG+GGG + chr8_2:58074132-58074151 None:intergenic 35.0%
CATCTCCTTTGTATAGATGT+TGG + chr8_2:58074134-58074153 None:intergenic 35.0%
TGTATGTAACAGGCGATATA+TGG - chr8_2:58074364-58074383 Msa1257440:intron 35.0%
GTATGTAACAGGCGATATAT+GGG - chr8_2:58074365-58074384 Msa1257440:intron 35.0%
CTTCTTTGCATTTGGTCTAA+TGG + chr8_2:58074402-58074421 None:intergenic 35.0%
CCTTTCTCGAAAATGTATTC+CGG + chr8_2:58074460-58074479 None:intergenic 35.0%
ATAGACGAATTGAGTGAAGA+TGG - chr8_2:58074584-58074603 Msa1257440:intron 35.0%
AATTGAGTGAAGATGGAATC+CGG - chr8_2:58074591-58074610 Msa1257440:intron 35.0%
! TATGTTCTCTCATTTGGCTT+TGG + chr8_2:58074698-58074717 None:intergenic 35.0%
ATAATGCCACCAACTTGAAA+GGG + chr8_2:58074752-58074771 None:intergenic 35.0%
AATAATGCCACCAACTTGAA+AGG + chr8_2:58074753-58074772 None:intergenic 35.0%
!! GTTGGTGGCATTATTAAACT+TGG - chr8_2:58074758-58074777 Msa1257440:CDS 35.0%
! TGGGAGAATACTCAATTTTG+TGG + chr8_2:58074938-58074957 None:intergenic 35.0%
TCAGGTAATCCGTTACTAAA+CGG + chr8_2:58074970-58074989 None:intergenic 35.0%
! GATGATGGTCTCTATTTCAT+CGG - chr8_2:58075124-58075143 Msa1257440:five_prime_UTR 35.0%
!! TCGTTTTGTTATGGCTTGAA+CGG - chr8_2:58075191-58075210 Msa1257440:five_prime_UTR 35.0%
ATGTGGGCTTATATCAATCT+CGG - chr8_2:58075235-58075254 Msa1257440:five_prime_UTR 35.0%
TAAAACCCCATTGGAGAATG+GGG + chr8_2:58070007-58070026 None:intergenic 40.0%
CTAAAACCCCATTGGAGAAT+GGG + chr8_2:58070008-58070027 None:intergenic 40.0%
! TCTAAAACCCCATTGGAGAA+TGG + chr8_2:58070009-58070028 None:intergenic 40.0%
!!! TTTTGGTGTTAGAGTGAGTG+TGG + chr8_2:58070115-58070134 None:intergenic 40.0%
! TCTCGAACAGATGGCATTTT+TGG + chr8_2:58070132-58070151 None:intergenic 40.0%
! TTTGCGGTTTCATGCTTTTC+GGG - chr8_2:58070171-58070190 Msa1257440:three_prime_UTR 40.0%
AAGATGAGAAACAACGTGAC+CGG + chr8_2:58070219-58070238 None:intergenic 40.0%
TTGCCAATGTGGTCTACAAT+AGG - chr8_2:58070347-58070366 Msa1257440:CDS 40.0%
! GTGCTACAGGATAGCTTTTA+TGG + chr8_2:58070460-58070479 None:intergenic 40.0%
AAGCTATCCTGTAGCACTTA+TGG - chr8_2:58070463-58070482 Msa1257440:CDS 40.0%
CCTAGAGAATCATCCACATT+GGG + chr8_2:58070724-58070743 None:intergenic 40.0%
ACTACTACGGATGCAAAGAA+AGG - chr8_2:58070881-58070900 Msa1257440:CDS 40.0%
CTACTACGGATGCAAAGAAA+GGG - chr8_2:58070882-58070901 Msa1257440:CDS 40.0%
TACTACGGATGCAAAGAAAG+GGG - chr8_2:58070883-58070902 Msa1257440:CDS 40.0%
TAGCAACATGGAGACTTAGA+AGG + chr8_2:58071150-58071169 None:intergenic 40.0%
ACTAGAGACAGATGCAAATC+TGG - chr8_2:58071258-58071277 Msa1257440:intron 40.0%
GTTTAGATCATGTTAAGGGG+AGG + chr8_2:58071327-58071346 None:intergenic 40.0%
TAGTGTGACCTTGTTGAAAG+AGG - chr8_2:58071464-58071483 Msa1257440:CDS 40.0%
CATGAAAGCCTCTTTCAACA+AGG + chr8_2:58071475-58071494 None:intergenic 40.0%
CTTGTTGAAAGAGGCTTTCA+TGG - chr8_2:58071473-58071492 Msa1257440:CDS 40.0%
! TCATAGCAGTGTAATGGAAG+GGG + chr8_2:58071499-58071518 None:intergenic 40.0%
! CTCATAGCAGTGTAATGGAA+GGG + chr8_2:58071500-58071519 None:intergenic 40.0%
! TCTCATAGCAGTGTAATGGA+AGG + chr8_2:58071501-58071520 None:intergenic 40.0%
GACTGAACCAACAAAGAACT+GGG - chr8_2:58071700-58071719 Msa1257440:intron 40.0%
ACTGAACCAACAAAGAACTG+GGG - chr8_2:58071701-58071720 Msa1257440:intron 40.0%
TACTTACCCCAGTTCTTTGT+TGG + chr8_2:58071710-58071729 None:intergenic 40.0%
AACAAAGAACTGGGGTAAGT+AGG - chr8_2:58071709-58071728 Msa1257440:intron 40.0%
TTTAATTACACCGTCGTGGA+TGG - chr8_2:58071779-58071798 Msa1257440:intron 40.0%
AATGCGAGGCTAGATTGATT+AGG - chr8_2:58071920-58071939 Msa1257440:CDS 40.0%
! ATATGTGTCATGTCGGTGTT+GGG - chr8_2:58072101-58072120 Msa1257440:intron 40.0%
TATGAAGCAAGGACACTCTA+TGG + chr8_2:58072138-58072157 None:intergenic 40.0%
! ATAGAGTGTCCTTGCTTCAT+AGG - chr8_2:58072137-58072156 Msa1257440:intron 40.0%
ATTCAGGATCTGATTTCCTC+GGG + chr8_2:58072716-58072735 None:intergenic 40.0%
ACTAGGTGTTTCATCATGAC+AGG + chr8_2:58072857-58072876 None:intergenic 40.0%
ATGATGAAACACCTAGTAGC+TGG - chr8_2:58072860-58072879 Msa1257440:intron 40.0%
ACTGACATTAACCAGCTACT+AGG + chr8_2:58072874-58072893 None:intergenic 40.0%
TGTAATGAGGATGCGAAAGA+TGG - chr8_2:58073084-58073103 Msa1257440:intron 40.0%
TTCACTGAACACACCTCAAA+TGG + chr8_2:58073129-58073148 None:intergenic 40.0%
TGTTCAGTGAACCTTGTGTA+TGG - chr8_2:58073138-58073157 Msa1257440:intron 40.0%
AACTTCCATCAAAGGCAAAG+TGG - chr8_2:58073172-58073191 Msa1257440:intron 40.0%
CCAGACACACCAAAAGATAT+AGG + chr8_2:58073259-58073278 None:intergenic 40.0%
!! CCTATATCTTTTGGTGTGTC+TGG - chr8_2:58073256-58073275 Msa1257440:CDS 40.0%
!!! TCAGGTTGTTATTTTGGTGG+GGG - chr8_2:58073471-58073490 Msa1257440:intron 40.0%
! GTTTCTCCTTTTATCACCCA+TGG - chr8_2:58073607-58073626 Msa1257440:intron 40.0%
! TTCTCCTTTTATCACCCATG+GGG - chr8_2:58073609-58073628 Msa1257440:intron 40.0%
!! CAGTAATCCTGACTTGTTCA+AGG - chr8_2:58073632-58073651 Msa1257440:intron 40.0%
CACATACCTGTATGTTGCAT+CGG - chr8_2:58074057-58074076 Msa1257440:CDS 40.0%
ACATACCTGTATGTTGCATC+GGG - chr8_2:58074058-58074077 Msa1257440:CDS 40.0%
CGGGAAGAGAATGAAAGAAA+AGG + chr8_2:58074178-58074197 None:intergenic 40.0%
CAATGTAATCAACAGCAGCT+AGG + chr8_2:58074201-58074220 None:intergenic 40.0%
TGCTAACAACAACGGTAACA+TGG - chr8_2:58074246-58074265 Msa1257440:intron 40.0%
!! CCGGAATACATTTTCGAGAA+AGG - chr8_2:58074457-58074476 Msa1257440:intron 40.0%
GAGAATTGCAAGAGCAACTT+TGG - chr8_2:58074725-58074744 Msa1257440:CDS 40.0%
! AACTTTGGTCCCTTTCAAGT+TGG - chr8_2:58074740-58074759 Msa1257440:CDS 40.0%
TACGTACTTTCCCCTATACA+TGG + chr8_2:58074829-58074848 None:intergenic 40.0%
TTCATTGTGAGCTCAGCTAT+AGG - chr8_2:58074899-58074918 Msa1257440:five_prime_UTR 40.0%
TACTAAACGGGAAACAACGT+GGG + chr8_2:58074957-58074976 None:intergenic 40.0%
TTACTAAACGGGAAACAACG+TGG + chr8_2:58074958-58074977 None:intergenic 40.0%
! CGTTGTTTCCCGTTTAGTAA+CGG - chr8_2:58074958-58074977 Msa1257440:five_prime_UTR 40.0%
CAGGTAATCCGTTACTAAAC+GGG + chr8_2:58074969-58074988 None:intergenic 40.0%
TGTAGGTGGTATAATGCACT+TGG + chr8_2:58075069-58075088 None:intergenic 40.0%
TTCTTCAAGTGCAACGATGA+TGG - chr8_2:58075109-58075128 Msa1257440:five_prime_UTR 40.0%
!! TGACCAAGGTCGTTTTGTTA+TGG - chr8_2:58075182-58075201 Msa1257440:five_prime_UTR 40.0%
AAGCCATAACAAAACGACCT+TGG + chr8_2:58075188-58075207 None:intergenic 40.0%
TTGTTATGGCTTGAACGGAT+TGG - chr8_2:58075196-58075215 Msa1257440:five_prime_UTR 40.0%
GCTTATATCAATCTCGGCAA+TGG - chr8_2:58075241-58075260 Msa1257440:five_prime_UTR 40.0%
TGGGGGAAGAAACACAATGT+TGG + chr8_2:58069755-58069774 None:intergenic 45.0%
TACAATGCCCCATTCTCCAA+TGG - chr8_2:58069997-58070016 Msa1257440:intron 45.0%
ACAATGCCCCATTCTCCAAT+GGG - chr8_2:58069998-58070017 Msa1257440:intron 45.0%
TGGAATGGATCTCGAACAGA+TGG + chr8_2:58070141-58070160 None:intergenic 45.0%
TCTGTTCGAGATCCATTCCA+TGG - chr8_2:58070141-58070160 Msa1257440:three_prime_UTR 45.0%
TTCGAGATCCATTCCATGGT+CGG - chr8_2:58070145-58070164 Msa1257440:three_prime_UTR 45.0%
ATTCCATGGTCGGTCATTTG+CGG - chr8_2:58070155-58070174 Msa1257440:three_prime_UTR 45.0%
!!! GGTTTCATGCTTTTCGGGTT+GGG - chr8_2:58070176-58070195 Msa1257440:three_prime_UTR 45.0%
CCAGTGTAGAGAAGAAACTG+CGG + chr8_2:58070268-58070287 None:intergenic 45.0%
!! TGTTCAACCTCCACTTTTCC+AGG + chr8_2:58070613-58070632 None:intergenic 45.0%
CCCAATGTGGATGATTCTCT+AGG - chr8_2:58070721-58070740 Msa1257440:CDS 45.0%
GCCTAGAGAATCATCCACAT+TGG + chr8_2:58070725-58070744 None:intergenic 45.0%
ACAGATGCAAATCTGGCATG+AGG - chr8_2:58071265-58071284 Msa1257440:intron 45.0%
TGTTAAGGGGAGGTAATGAG+TGG + chr8_2:58071317-58071336 None:intergenic 45.0%
TCAACAAGGTCACACTAGTC+CGG + chr8_2:58071461-58071480 None:intergenic 45.0%
GGACTGAACCAACAAAGAAC+TGG - chr8_2:58071699-58071718 Msa1257440:intron 45.0%
TGTCATCTGTTCTCACTCAC+TGG - chr8_2:58071749-58071768 Msa1257440:intron 45.0%
TAGTTGCTGCCTATGAAGCA+TGG - chr8_2:58071997-58072016 Msa1257440:intron 45.0%
CTGCCTATGAAGCATGGATA+CGG - chr8_2:58072003-58072022 Msa1257440:intron 45.0%
TGTCCGTATCCATGCTTCAT+AGG + chr8_2:58072009-58072028 None:intergenic 45.0%
CATATGTGTCATGTCGGTGT+TGG - chr8_2:58072100-58072119 Msa1257440:intron 45.0%
GCAAGGACACTCTATGGATT+AGG + chr8_2:58072132-58072151 None:intergenic 45.0%
! CTGATGCTGTTGTTGTTGCA+CGG - chr8_2:58072360-58072379 Msa1257440:intron 45.0%
CAACTCAGGTACAACAAGTG+TGG + chr8_2:58072396-58072415 None:intergenic 45.0%
!! CACACTTGTTGTACCTGAGT+TGG - chr8_2:58072394-58072413 Msa1257440:intron 45.0%
GAGTTCCAGATAAGGTCATG+CGG - chr8_2:58072658-58072677 Msa1257440:intron 45.0%
ATTGACCGCATGACCTTATC+TGG + chr8_2:58072666-58072685 None:intergenic 45.0%
AGATAAGGTCATGCGGTCAA+TGG - chr8_2:58072665-58072684 Msa1257440:intron 45.0%
TGCCAATACTCTTGAGACGA+CGG - chr8_2:58072754-58072773 Msa1257440:intron 45.0%
TCACACCACTTTGCCTTTGA+TGG + chr8_2:58073180-58073199 None:intergenic 45.0%
CCTGAAAATGCCAGCATATC+TGG + chr8_2:58073456-58073475 None:intergenic 45.0%
! CCAGATATGCTGGCATTTTC+AGG - chr8_2:58073453-58073472 Msa1257440:intron 45.0%
ATACAGGATTTGAGCCCTGA+CGG - chr8_2:58073956-58073975 Msa1257440:intron 45.0%
TCCTCTTACTCCTCATGAAG+TGG - chr8_2:58074000-58074019 Msa1257440:intron 45.0%
CCTCTTACTCCTCATGAAGT+GGG - chr8_2:58074001-58074020 Msa1257440:intron 45.0%
AGCATCAAACCCACTTCATG+AGG + chr8_2:58074013-58074032 None:intergenic 45.0%
CATACCTGTATGTTGCATCG+GGG - chr8_2:58074059-58074078 Msa1257440:CDS 45.0%
ATACCTGTATGTTGCATCGG+GGG - chr8_2:58074060-58074079 Msa1257440:CDS 45.0%
GTTGCATCGGGGGAAATATA+CGG - chr8_2:58074070-58074089 Msa1257440:CDS 45.0%
TTGGGGAAAAGATCTCTGAG+AGG + chr8_2:58074115-58074134 None:intergenic 45.0%
TGTAATCAACAGCAGCTAGG+CGG + chr8_2:58074198-58074217 None:intergenic 45.0%
GCGCTAAGCTTCTTTGCATT+TGG + chr8_2:58074410-58074429 None:intergenic 45.0%
TTCTCACAGACACAAGTGCT+TGG + chr8_2:58074557-58074576 None:intergenic 45.0%
GGAACTGACGCCGAAATAAA+CGG - chr8_2:58074647-58074666 Msa1257440:intron 45.0%
!! TTTGGTCCCTTTCAAGTTGG+TGG - chr8_2:58074743-58074762 Msa1257440:CDS 45.0%
! GTGAGTGCTGTCATGAATTG+AGG + chr8_2:58075025-58075044 None:intergenic 45.0%
! GCACTTGGTTTGAGTCATGT+TGG + chr8_2:58075054-58075073 None:intergenic 45.0%
TTATACCACCTACAGCAAGC+TGG - chr8_2:58075075-58075094 Msa1257440:five_prime_UTR 45.0%
ATGTGTGTACGAGATGACCA+AGG - chr8_2:58075168-58075187 Msa1257440:five_prime_UTR 45.0%
! TGGACGATTAGAGCTGGTTT+AGG - chr8_2:58075261-58075280 Msa1257440:five_prime_UTR 45.0%
!! GAGAATGGGGCATTGTAGTG+TGG + chr8_2:58069994-58070013 None:intergenic 50.0%
CAATGCCCCATTCTCCAATG+GGG - chr8_2:58069999-58070018 Msa1257440:intron 50.0%
GACAAAACCCCAAATGGGTG+TGG - chr8_2:58070064-58070083 Msa1257440:three_prime_UTR 50.0%
GACTTCACCACACCCATTTG+GGG + chr8_2:58070074-58070093 None:intergenic 50.0%
CGACTTCACCACACCCATTT+GGG + chr8_2:58070075-58070094 None:intergenic 50.0%
ACGACTTCACCACACCCATT+TGG + chr8_2:58070076-58070095 None:intergenic 50.0%
AAATGGGTGTGGTGAAGTCG+TGG - chr8_2:58070075-58070094 Msa1257440:three_prime_UTR 50.0%
GTTAGAGTGAGTGTGGTTCG+TGG + chr8_2:58070108-58070127 None:intergenic 50.0%
GCAAATGACCGACCATGGAA+TGG + chr8_2:58070156-58070175 None:intergenic 50.0%
AAACCGCAAATGACCGACCA+TGG + chr8_2:58070161-58070180 None:intergenic 50.0%
!!! CGGTTTCATGCTTTTCGGGT+TGG - chr8_2:58070175-58070194 Msa1257440:three_prime_UTR 50.0%
CCGCAGTTTCTTCTCTACAC+TGG - chr8_2:58070265-58070284 Msa1257440:CDS 50.0%
!! TCCACTTTTCCAGGCAACGT+GGG + chr8_2:58070604-58070623 None:intergenic 50.0%
ATACGCGAGCGCATGTCAAA+TGG - chr8_2:58071651-58071670 Msa1257440:intron 50.0%
TACTTGCTTATTGCCGCGAG+CGG - chr8_2:58071675-58071694 Msa1257440:intron 50.0%
TGAAGCATGGATACGGACAC+CGG - chr8_2:58072010-58072029 Msa1257440:intron 50.0%
ACGCAGCAACCTATGAAGCA+AGG + chr8_2:58072149-58072168 None:intergenic 50.0%
TCGGGACACGCATGGTATAT+GGG + chr8_2:58072698-58072717 None:intergenic 50.0%
GCCAATACTCTTGAGACGAC+GGG - chr8_2:58072755-58072774 Msa1257440:intron 50.0%
! ACCCGTCGTCTCAAGAGTAT+TGG + chr8_2:58072759-58072778 None:intergenic 50.0%
TACTCTTGAGACGACGGGTA+AGG - chr8_2:58072760-58072779 Msa1257440:intron 50.0%
CAGGTTTGAGCCAGATATGC+TGG - chr8_2:58073443-58073462 Msa1257440:intron 50.0%
ACTGCCCCATGGGTGATAAA+AGG + chr8_2:58073616-58073635 None:intergenic 50.0%
AGTCAGGATTACTGCCCCAT+GGG + chr8_2:58073626-58073645 None:intergenic 50.0%
AAGTCAGGATTACTGCCCCA+TGG + chr8_2:58073627-58073646 None:intergenic 50.0%
CCCACTTCATGAGGAGTAAG+AGG + chr8_2:58074004-58074023 None:intergenic 50.0%
TTTCCCCCGATGCAACATAC+AGG + chr8_2:58074066-58074085 None:intergenic 50.0%
CATCGGGGGAAATATACGGT+GGG - chr8_2:58074074-58074093 Msa1257440:CDS 50.0%
ATCGGGGGAAATATACGGTG+GGG - chr8_2:58074075-58074094 Msa1257440:CDS 50.0%
! AAGATCTCTGAGAGGCTGCA+TGG + chr8_2:58074107-58074126 None:intergenic 50.0%
TACAAAGGAGATGCTTGCCG+AGG - chr8_2:58074141-58074160 Msa1257440:intron 50.0%
GTAATCAACAGCAGCTAGGC+GGG + chr8_2:58074197-58074216 None:intergenic 50.0%
ACAACAACGGTAACATGGCC+AGG - chr8_2:58074251-58074270 Msa1257440:intron 50.0%
AACATGGCCAGGATTCTTGC+TGG - chr8_2:58074262-58074281 Msa1257440:intron 50.0%
CCTTTGACCAGCAAGAATCC+TGG + chr8_2:58074272-58074291 None:intergenic 50.0%
CCAGGATTCTTGCTGGTCAA+AGG - chr8_2:58074269-58074288 Msa1257440:intron 50.0%
GTTCATGGCGAGGCATGAAA+TGG - chr8_2:58074433-58074452 Msa1257440:intron 50.0%
! AAGGTAAAGGCGTGCCAAAG+AGG - chr8_2:58074476-58074495 Msa1257440:intron 50.0%
GCGTGCCAAAGAGGATTCAT+GGG - chr8_2:58074485-58074504 Msa1257440:intron 50.0%
GCTCTCCCATGAATCCTCTT+TGG + chr8_2:58074493-58074512 None:intergenic 50.0%
TAAATGCGAGCTTAGGTGGC+CGG + chr8_2:58074613-58074632 None:intergenic 50.0%
ACTGACGCCGAAATAAACGG+AGG - chr8_2:58074650-58074669 Msa1257440:intron 50.0%
CGGCAAAGCAACTCAGTTAC+TGG - chr8_2:58075144-58075163 Msa1257440:five_prime_UTR 50.0%
CGTCACATGAGGCTACATGT+GGG - chr8_2:58075219-58075238 Msa1257440:five_prime_UTR 50.0%
GTTAGAAGTCCCACGTTGCC+TGG - chr8_2:58070592-58070611 Msa1257440:intron 55.0%
TCCCACGTTGCCTGGAAAAG+TGG - chr8_2:58070600-58070619 Msa1257440:intron 55.0%
!! CTCCACTTTTCCAGGCAACG+TGG + chr8_2:58070605-58070624 None:intergenic 55.0%
CACGTTGCCTGGAAAAGTGG+AGG - chr8_2:58070603-58070622 Msa1257440:intron 55.0%
! TGGTTGCTTTGGGCCCAATG+TGG - chr8_2:58070708-58070727 Msa1257440:CDS 55.0%
TACTGACGACTGGGTCACGA+GGG + chr8_2:58070750-58070769 None:intergenic 55.0%
TACGGACACCGGACATGACA+CGG - chr8_2:58072021-58072040 Msa1257440:intron 55.0%
GTCAGTGTCCGTGTCATGTC+CGG + chr8_2:58072032-58072051 None:intergenic 55.0%
GGGACACGCATGGTATATGG+GGG + chr8_2:58072696-58072715 None:intergenic 55.0%
CGGGACACGCATGGTATATG+GGG + chr8_2:58072697-58072716 None:intergenic 55.0%
CTCGGGACACGCATGGTATA+TGG + chr8_2:58072699-58072718 None:intergenic 55.0%
CATATACCATGCGTGTCCCG+AGG - chr8_2:58072697-58072716 Msa1257440:intron 55.0%
TGATTTCCTCGGGACACGCA+TGG + chr8_2:58072706-58072725 None:intergenic 55.0%
CACGCTTTCGTTCTCCGTCA+GGG + chr8_2:58073973-58073992 None:intergenic 55.0%
! CTGACGGAGAACGAAAGCGT+GGG - chr8_2:58073972-58073991 Msa1257440:intron 55.0%
GCATCGGGGGAAATATACGG+TGG - chr8_2:58074073-58074092 Msa1257440:CDS 55.0%
GAAGCTTAGCGCGCTGTTCA+TGG - chr8_2:58074418-58074437 Msa1257440:intron 55.0%
TGGCGAGGCATGAAATGGAC+CGG - chr8_2:58074438-58074457 Msa1257440:intron 55.0%
GGCGTGCCAAAGAGGATTCA+TGG - chr8_2:58074484-58074503 Msa1257440:intron 55.0%
AGAGGATTCATGGGAGAGCC+AGG - chr8_2:58074494-58074513 Msa1257440:intron 55.0%
GAGCCAGGAGAGATGAAAGC+TGG - chr8_2:58074509-58074528 Msa1257440:intron 55.0%
CGTCCAGCTTTCATCTCTCC+TGG + chr8_2:58074515-58074534 None:intergenic 55.0%
GGAGAGATGAAAGCTGGACG+AGG - chr8_2:58074515-58074534 Msa1257440:intron 55.0%
!! GAAGAGCTCCAGCTTGCTGT+AGG + chr8_2:58075086-58075105 None:intergenic 55.0%
!! GAACGGATTGGCGTCACATG+AGG - chr8_2:58075208-58075227 Msa1257440:five_prime_UTR 55.0%
GCGTCACATGAGGCTACATG+TGG - chr8_2:58075218-58075237 Msa1257440:five_prime_UTR 55.0%
CGGCAATGGACGATTAGAGC+TGG - chr8_2:58075255-58075274 Msa1257440:five_prime_UTR 55.0%
ACTGACGACTGGGTCACGAG+GGG + chr8_2:58070749-58070768 None:intergenic 60.0%
CTACTGACGACTGGGTCACG+AGG + chr8_2:58070751-58070770 None:intergenic 60.0%
TTGCTTATTGCCGCGAGCGG+AGG - chr8_2:58071678-58071697 Msa1257440:intron 60.0%
TTGGTTCAGTCCTCCGCTCG+CGG + chr8_2:58071691-58071710 None:intergenic 60.0%
CCACGCTTTCGTTCTCCGTC+AGG + chr8_2:58073974-58073993 None:intergenic 60.0%
CCTGACGGAGAACGAAAGCG+TGG - chr8_2:58073971-58073990 Msa1257440:intron 60.0%
GGTTTGATGCTGCGAGCGCT+TGG - chr8_2:58074022-58074041 Msa1257440:intron 60.0%
TTAGCGCGCTGTTCATGGCG+AGG - chr8_2:58074423-58074442 Msa1257440:intron 60.0%
!! GAGCTCCAGCTTGCTGTAGG+TGG + chr8_2:58075083-58075102 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 58069633 58075320 58069633 ID=Msa1257440;Name=Msa1257440
chr8_2 mRNA 58069633 58075320 58069633 ID=Msa1257440-mRNA-1;Parent=Msa1257440;Name=Msa1257440-mRNA-1;_AED=0.08;_eAED=0.08;_QI=444|1|1|1|0.88|0.8|10|482|538
chr8_2 exon 58069633 58069915 58069633 ID=Msa1257440-mRNA-1:exon:17964;Parent=Msa1257440-mRNA-1
chr8_2 exon 58070033 58070577 58070033 ID=Msa1257440-mRNA-1:exon:17963;Parent=Msa1257440-mRNA-1
chr8_2 exon 58070663 58070991 58070663 ID=Msa1257440-mRNA-1:exon:17962;Parent=Msa1257440-mRNA-1
chr8_2 exon 58071405 58071507 58071405 ID=Msa1257440-mRNA-1:exon:17961;Parent=Msa1257440-mRNA-1
chr8_2 exon 58071819 58072000 58071819 ID=Msa1257440-mRNA-1:exon:17960;Parent=Msa1257440-mRNA-1
chr8_2 exon 58072177 58072366 58072177 ID=Msa1257440-mRNA-1:exon:17959;Parent=Msa1257440-mRNA-1
chr8_2 exon 58072509 58072597 58072509 ID=Msa1257440-mRNA-1:exon:17958;Parent=Msa1257440-mRNA-1
chr8_2 exon 58073231 58073307 58073231 ID=Msa1257440-mRNA-1:exon:17957;Parent=Msa1257440-mRNA-1
chr8_2 exon 58074034 58074124 58074034 ID=Msa1257440-mRNA-1:exon:17956;Parent=Msa1257440-mRNA-1
chr8_2 exon 58074667 58075320 58074667 ID=Msa1257440-mRNA-1:exon:17955;Parent=Msa1257440-mRNA-1
chr8_2 five_prime_UTR 58074877 58075320 58074877 ID=Msa1257440-mRNA-1:five_prime_utr;Parent=Msa1257440-mRNA-1
chr8_2 CDS 58074667 58074876 58074667 ID=Msa1257440-mRNA-1:cds;Parent=Msa1257440-mRNA-1
chr8_2 CDS 58074034 58074124 58074034 ID=Msa1257440-mRNA-1:cds;Parent=Msa1257440-mRNA-1
chr8_2 CDS 58073231 58073307 58073231 ID=Msa1257440-mRNA-1:cds;Parent=Msa1257440-mRNA-1
chr8_2 CDS 58072509 58072597 58072509 ID=Msa1257440-mRNA-1:cds;Parent=Msa1257440-mRNA-1
chr8_2 CDS 58072177 58072366 58072177 ID=Msa1257440-mRNA-1:cds;Parent=Msa1257440-mRNA-1
chr8_2 CDS 58071819 58072000 58071819 ID=Msa1257440-mRNA-1:cds;Parent=Msa1257440-mRNA-1
chr8_2 CDS 58071405 58071507 58071405 ID=Msa1257440-mRNA-1:cds;Parent=Msa1257440-mRNA-1
chr8_2 CDS 58070663 58070991 58070663 ID=Msa1257440-mRNA-1:cds;Parent=Msa1257440-mRNA-1
chr8_2 CDS 58070232 58070577 58070232 ID=Msa1257440-mRNA-1:cds;Parent=Msa1257440-mRNA-1
chr8_2 three_prime_UTR 58070033 58070231 58070033 ID=Msa1257440-mRNA-1:three_prime_utr;Parent=Msa1257440-mRNA-1
chr8_2 three_prime_UTR 58069633 58069915 58069633 ID=Msa1257440-mRNA-1:three_prime_utr;Parent=Msa1257440-mRNA-1
Gene Sequence

>Msa1257440

ATGGGTGTGGTGAAGTCGTGGTTGTTATCCACGAACCACACTCACTCTAACACCAAAAATGCCATCTGTTCGAGATCCATTCCATGGTCGGTCATTTGCGGTTTCATGCTTTTCGGGTTGGGTCTCATTTCTCTTTTAACCGGTCACGTTGTTTCTCATCTTGAATGGTACTCTCAACGATTCGTTCACCGCAGTTTCTTCTCTACACTGGATGGAAATGATCATGCGCCAATTGATATTTGGGAATCACAATATTCTAAATACTACTACGGATGCAAAGAAAGGGGACGTCATTTTTATCCTGCTATACGCGAGCGCATGTCAAATGGCTACTTGCTTATTGCCGCGAGCGGAGGACTGAACCAACAAAGAACTGGGATAACTGATGCTGTTGTTGTTGCACGGATTCTTAATGCCACACTTGTTGTACCTGAGTTGGATCATAATTCTTTTTGGAAGGATGACAGTGACTTCGCCAACATTTTCGATGTTAATTGGTTCATTAATTATCTGGCAAAAGATGTTACTATTGTTAAAAGAGTTCCAGATAAGGTCATGCGGTCAATGGATAAACCCCCATATACCATGCGTGTCCCGAGGAAATCAGATCCTGAATATTATCTTGATCAAGTTTTGCCAATACTCTTGAGACGACGGGTTCTACAATTGACGAAGTTTGACTATAGACTTGCCAATGACCTTGATGATGAACTACAAAAACTACGTTGCCGTGTTAATTATCATGCTTTGAGATTTACAAAACCAATACGACAACTTGGTCAAAAAATTGTAATGAGGATGCGAAAGATGGCAAACCGTTATATAGCAGTCCATTTGAGGTTTGAGCCAGATATGCTGGCATTTTCAGGTTGTTATTTTGGTGGGGGTGAAAAAGAAAGACAAGAGCTTGGTGAAATCAGAAAAAGGTGGACAACATTGCCTGATTTGAGCCCTGACGGAGAACGAAAGCGTGGGAAATGTCCTCTTACTCCTCATGAAGTGGGTTTGATGCTGCGAGCGCTTGGTTATACAAATGACACATACCTGTATGTTGCATCGGGGGAAATATACGGTGGGGATGAAACCATGCAGCCTCTCAGAGATCTTTTCCCCAACATCTATACAAAGGAGATGCTTGCCGAGGAAGAATTGAAACCTTTTCTTTCATTCTCTTCCCGCCTAGCTGCTGTTGATTACATTGTTTGTGATGAAAGTAATGTATTTGTTGCTAACAACAACGGTAACATGGCCAGGATTCTTGCTGGTCAAAGGCGATATATGGGTCACAAGAGAACCATTAGACCAAATGCAAAGAAGCTTAGCGCGCTGTTCATGGCGAGGCATGAAATGGACCGGAATACATTTTCGAGAAAGGTAAAGGCGTGCCAAAGAGGATTCATGGGAGAGCCAGGAGAGATGAAAGCTGGACGAGGAGAGTTTCATGAATATCCAAGCACTTGTGTCTGTGAGAAACCATTTATAGACGAATTGAGTGAAGATGGAATCCGGCCACCTAAGCTCGCATTTAGAAATCTGACAATAGGAACTGACGCCGAAATAAACGGAGGAAATGAAGAAAGTTTTGAGCTACCAAAGCCAAATGAGAGAACATATTAA
Protein sequence

>Msa1257440

MGVVKSWLLSTNHTHSNTKNAICSRSIPWSVICGFMLFGLGLISLLTGHVVSHLEWYSQRFVHRSFFSTLDGNDHAPIDIWESQYSKYYYGCKERGRHFYPAIRERMSNGYLLIAASGGLNQQRTGITDAVVVARILNATLVVPELDHNSFWKDDSDFANIFDVNWFINYLAKDVTIVKRVPDKVMRSMDKPPYTMRVPRKSDPEYYLDQVLPILLRRRVLQLTKFDYRLANDLDDELQKLRCRVNYHALRFTKPIRQLGQKIVMRMRKMANRYIAVHLRFEPDMLAFSGCYFGGGEKERQELGEIRKRWTTLPDLSPDGERKRGKCPLTPHEVGLMLRALGYTNDTYLYVASGEIYGGDETMQPLRDLFPNIYTKEMLAEEELKPFLSFSSRLAAVDYIVCDESNVFVANNNGNMARILAGQRRYMGHKRTIRPNAKKLSALFMARHEMDRNTFSRKVKACQRGFMGEPGEMKAGRGEFHEYPSTCVCEKPFIDELSEDGIRPPKLAFRNLTIGTDAEINGGNEESFELPKPNERTY*