AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0897650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0897650 MtrunA17_Chr6g0483461 97.286 737 20 0 1 737 1 737 0.0 1497
Msa0897650 MtrunA17_Chr8g0392531 72.948 743 191 6 1 737 1 739 0.0 1106
Msa0897650 MtrunA17_Chr8g0340751 65.932 499 166 3 13 508 24 521 0.0 720
Msa0897650 MtrunA17_Chr3g0140561 66.667 486 160 2 18 501 26 511 0.0 719
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0897650 AT1G17980.1 77.336 503 112 2 9 511 5 505 0.0 833
Msa0897650 AT4G32850.6 59.358 561 219 3 11 563 16 575 0.0 709
Msa0897650 AT4G32850.9 59.358 561 219 3 11 563 16 575 0.0 709
Msa0897650 AT4G32850.2 59.358 561 219 3 11 563 16 575 0.0 709
Msa0897650 AT4G32850.5 59.358 561 219 3 11 563 16 575 0.0 709
Msa0897650 AT4G32850.8 59.358 561 219 3 11 563 16 575 0.0 709
Msa0897650 AT4G32850.10 59.358 561 219 3 11 563 16 575 0.0 709
Msa0897650 AT4G32850.3 59.358 561 219 3 11 563 16 575 0.0 708
Msa0897650 AT4G32850.1 59.358 561 219 3 11 563 16 575 0.0 708
Msa0897650 AT4G32850.13 59.358 561 219 3 11 563 16 575 0.0 707
Msa0897650 AT4G32850.15 59.358 561 219 3 11 563 16 575 0.0 707
Msa0897650 AT4G32850.16 59.358 561 219 3 11 563 16 575 0.0 707
Msa0897650 AT4G32850.4 59.358 561 219 3 11 563 16 575 0.0 707
Msa0897650 AT4G32850.7 59.358 561 219 3 11 563 16 575 0.0 707
Msa0897650 AT4G32850.17 59.358 561 219 3 11 563 16 575 0.0 707
Msa0897650 AT4G32850.14 59.358 561 219 3 11 563 16 575 0.0 707
Msa0897650 AT4G32850.12 59.358 561 219 3 11 563 16 575 0.0 707
Msa0897650 AT4G32850.11 59.358 561 219 3 11 563 16 575 0.0 707
Msa0897650 AT2G25850.4 62.193 529 184 4 17 543 24 538 0.0 704
Msa0897650 AT2G25850.1 62.193 529 184 4 17 543 24 538 0.0 704
Msa0897650 AT2G25850.2 62.193 529 184 4 17 543 24 538 0.0 704
Msa0897650 AT2G25850.3 62.193 529 184 4 17 543 24 538 0.0 704
Msa0897650 AT2G25850.6 62.193 529 184 4 17 543 24 538 0.0 703
Msa0897650 AT2G25850.7 62.193 529 184 4 17 543 24 538 0.0 703
Msa0897650 AT2G25850.8 62.193 529 184 4 17 543 24 538 0.0 703
Msa0897650 AT2G25850.5 62.193 529 184 4 17 543 24 538 0.0 703
Msa0897650 AT2G25850.9 62.193 529 184 4 17 543 24 538 0.0 702
Msa0897650 AT1G17980.2 77.309 379 85 1 133 511 1 378 0.0 635
Msa0897650 AT3G06560.1 35.088 456 275 6 30 484 13 448 1.39e-83 275

Find 218 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCACCAATGTTACTTTA+TGG 0.121255 6_1:+89998670 Msa0897650:CDS
ATAACCATCACCTGAATATT+TGG 0.135587 6_1:-89997293 None:intergenic
TTGTTCGGAATTGCTGATTT+AGG 0.146492 6_1:+89994935 Msa0897650:five_prime_UTR
GTGATGAAATTCAAGTTTAA+TGG 0.194102 6_1:+89996819 Msa0897650:CDS
CATTAAGATTCATGAGGTTT+TGG 0.204551 6_1:+89997409 Msa0897650:CDS
AATAGTACAAAACTTCAAAT+TGG 0.207341 6_1:-89994976 None:intergenic
CTATCTCTGGGATTTCTTCT+AGG 0.236839 6_1:-89997767 None:intergenic
GATTACAGAGAAGAAGAAAA+AGG 0.267165 6_1:-89994710 None:intergenic
GCGTTTAGTTCCAAATATTC+AGG 0.278540 6_1:+89997283 Msa0897650:CDS
TCTTTAGTGTTAGATGTATC+AGG 0.279655 6_1:-89999262 None:intergenic
GTTGGTCCAGCCAATGAAAT+TGG 0.293988 6_1:-89995385 None:intergenic
TCAAATAGCCCTTGTAATTT+CGG 0.296713 6_1:+90000484 Msa0897650:CDS
TGTTCGGAATTGCTGATTTA+GGG 0.301156 6_1:+89994936 Msa0897650:five_prime_UTR
CTGCTGTAATGTCTATTTGT+AGG 0.303060 6_1:-89998332 None:intergenic
AACTGTTCACCTTCGTTTAC+CGG 0.308065 6_1:-89998716 None:intergenic
TTCCACCAATGTTACTTTAT+GGG 0.308885 6_1:+89998671 Msa0897650:CDS
AATCGAGACACCAACATATT+AGG 0.313637 6_1:-89997656 None:intergenic
AAAATTGTTACATAGATAAA+AGG 0.319123 6_1:-90001034 None:intergenic
TCAACTCATTCATTCTCTAA+TGG 0.319633 6_1:+89999496 Msa0897650:CDS
TCTTCCACTACCGCAAGATT+TGG 0.320954 6_1:-89999445 None:intergenic
TGAATCAGATTGTGAAGATT+TGG 0.322730 6_1:+89996264 Msa0897650:intron
TTACTCTGATTTCCCATTCC+AGG 0.330048 6_1:-89995334 None:intergenic
TGATGAGCTTCAACAAGATA+TGG 0.335890 6_1:+89999357 Msa0897650:CDS
ATAGTACAAAACTTCAAATT+GGG 0.337639 6_1:-89994975 None:intergenic
TGGGTTTAGGAGGATTTCTT+TGG 0.339547 6_1:+89996723 Msa0897650:intron
CAAGAACTAGTAGCACTAAA+AGG 0.342762 6_1:-89999097 None:intergenic
CCCAACCTTTCCATTGTCTA+AGG 0.343802 6_1:-89998368 None:intergenic
GCACAAAGCATGACTGGATT+TGG 0.345010 6_1:-89997707 None:intergenic
GGAAGATCAAGTTATTTCTA+AGG 0.348675 6_1:+89999462 Msa0897650:CDS
AGGTTGAACTTCACATCCTT+AGG 0.362242 6_1:+90000931 Msa0897650:intron
AGTAATGGAAAACAATGGTT+AGG 0.363093 6_1:+89995352 Msa0897650:CDS
ATACCAAGCTTCATATTTCC+TGG 0.368990 6_1:+89998842 Msa0897650:CDS
CTAAAAGGATTTCTATCTTC+AGG 0.371322 6_1:-89999082 None:intergenic
GAATCCCTTCGCCCTGCTAA+TGG 0.373468 6_1:-89996294 None:intergenic
TAGATTGAGAAGTACACTTA+TGG 0.374942 6_1:+89998596 Msa0897650:intron
CCATATTATTCACAGGTTGC+TGG 0.375050 6_1:+89997566 Msa0897650:intron
TTCCATTGTCTAAGGTCGTC+TGG 0.377225 6_1:-89998360 None:intergenic
AAAGGGTGCGAGCGATGATA+TGG 0.378794 6_1:-89994692 None:intergenic
TCGGTTGGTGAGATTCCTTC+TGG 0.381490 6_1:+89999190 Msa0897650:CDS
GGATAAGCAGGAGTAATTAT+AGG 0.382631 6_1:-89997803 None:intergenic
ATCTCTTGGACTATCGGTTT+GGG 0.383690 6_1:+89997742 Msa0897650:CDS
ATCTTCAGGAACAGTCCAAT+TGG 0.395282 6_1:-89999068 None:intergenic
CTTTCTCTTCCTTTCATCAT+CGG 0.398080 6_1:-89998987 None:intergenic
GATCTCTTGGACTATCGGTT+TGG 0.403460 6_1:+89997741 Msa0897650:CDS
GATAACTGAGCCAATTTCAT+TGG 0.408497 6_1:+89995375 Msa0897650:CDS
CAAACCTTGCCGAAATTACA+AGG 0.409886 6_1:-90000493 None:intergenic
AAAAGTTCGATAAAAGTTGA+TGG 0.411168 6_1:-90001086 None:intergenic
CATTAGATGATATCTATCTC+TGG 0.413765 6_1:-89997780 None:intergenic
GCATCAAGTTGTTTGTTATC+CGG 0.416100 6_1:-89999238 None:intergenic
ATCTTGCAGGTGCATGGTCC+TGG 0.416124 6_1:+89996568 Msa0897650:intron
GAGACGCGGATGTTCATTCC+AGG 0.418266 6_1:-89998800 None:intergenic
CACAGAAGAAGCCTCTTATC+AGG 0.419182 6_1:+90000250 Msa0897650:CDS
GTTCAGTACTTGCAAGGTGC+TGG 0.419977 6_1:+89995689 Msa0897650:intron
ATATCTTGTTGAAGCTCATC+AGG 0.420351 6_1:-89999355 None:intergenic
CATCTGTATCCCCTCCCAAT+TGG 0.420820 6_1:+89999053 Msa0897650:CDS
TTCTCACCGTTTACTTTAGA+CGG 0.421644 6_1:-89998884 None:intergenic
GGAGGCTAGCAAAGCTGATT+GGG 0.423680 6_1:+89998263 Msa0897650:CDS
GCAGCGTAAGCAAGGAGTTC+CGG 0.425189 6_1:+89998697 Msa0897650:CDS
TGGAGGCTAGCAAAGCTGAT+TGG 0.425422 6_1:+89998262 Msa0897650:CDS
GGAGGTAAAGCGGTTGTACC+TGG 0.435859 6_1:+89998962 Msa0897650:CDS
TCTGAAAATTCGCCAGGATA+CGG 0.436656 6_1:-89998635 None:intergenic
AGAAATCAAGTCAATGATAA+TGG 0.438511 6_1:+89999385 Msa0897650:CDS
AAATCCAAATCTTGCGGTAG+TGG 0.439944 6_1:+89999441 Msa0897650:CDS
TTCCTTTCATCATCGGCTCC+AGG 0.441662 6_1:-89998980 None:intergenic
GCTATTGAAGAAGGATCTCT+TGG 0.442160 6_1:+89997728 Msa0897650:CDS
ACCTTAGACAATGGAAAGGT+TGG 0.442976 6_1:+89998367 Msa0897650:CDS
GGAGGAAGTGCTTGGCAGAC+TGG 0.444344 6_1:+89995745 Msa0897650:CDS
CGAGAAACCCTGTCTGAAAT+CGG 0.444510 6_1:+89999171 Msa0897650:CDS
GAATCAGATTGTGAAGATTT+GGG 0.444681 6_1:+89996265 Msa0897650:intron
TGATCTCCTGTATGCAAGAT+TGG 0.446198 6_1:+89996851 Msa0897650:CDS
AATGGTGCAGTCAGCTCAGC+AGG 0.448413 6_1:-90000201 None:intergenic
CTTCAGTGTCACCCGTATCC+TGG 0.448988 6_1:+89998623 Msa0897650:CDS
TGCGAGCGATGATATGGCTT+TGG 0.451794 6_1:-89994686 None:intergenic
ACATCTCTGGTTGCATGTCT+AGG 0.454924 6_1:-89996619 None:intergenic
TTTGTCACATCTTCCTCAGT+TGG 0.455777 6_1:-89995403 None:intergenic
TCTCCGCCAGTTGACATTGA+AGG 0.456885 6_1:+89998401 Msa0897650:CDS
GAAGGGATTCAATGAACAAC+TGG 0.460454 6_1:+89996307 Msa0897650:CDS
TTCATTCTCTAATGGAGGCT+TGG 0.460849 6_1:+89999504 Msa0897650:CDS
TCTGGGTCATCGAGATTGTT+CGG 0.463213 6_1:+89994920 Msa0897650:five_prime_UTR
GTTATCCGGCGCTGATCCAT+TGG 0.464992 6_1:-89999224 None:intergenic
TCAATAGCACAAAGCATGAC+TGG 0.467641 6_1:-89997713 None:intergenic
AAGGTGAACAGTTTGATATA+AGG 0.468519 6_1:+89998726 Msa0897650:CDS
GGTTGAACTTCACATCCTTA+GGG 0.468725 6_1:+90000932 Msa0897650:intron
TTCTTCTGTGGTACAGGAGC+AGG 0.468957 6_1:-90000237 None:intergenic
ACTGAGCCAATTTCATTGGC+TGG 0.469138 6_1:+89995379 Msa0897650:CDS
GTCAGCAGGAGGCAGTTGGT+AGG 0.469915 6_1:+89995723 Msa0897650:CDS
ACGGAAGGTCGAACGCCGCC+AGG 0.470088 6_1:-89998860 None:intergenic
TATTGTCCATACCTGATAAG+AGG 0.470151 6_1:-90000261 None:intergenic
CTGAAAATTCGCCAGGATAC+GGG 0.470204 6_1:-89998634 None:intergenic
AAAGACTCATGAACTTGAAA+AGG 0.470509 6_1:+89995423 Msa0897650:CDS
GAGTTCATGCAAGGATAAGC+AGG 0.471704 6_1:-89997815 None:intergenic
CTGATGAAGAAGAAAGGAAA+GGG 0.472712 6_1:-89994640 None:intergenic
GCCATCGAACATATCATGTC+TGG 0.476107 6_1:+89999298 Msa0897650:CDS
ATGCTTTGTGCTATTGAAGA+AGG 0.478933 6_1:+89997719 Msa0897650:CDS
TTTGGGTGAAAACCATTAGC+AGG 0.480623 6_1:+89996282 Msa0897650:CDS
ATAGACGAAGTTCAAAATCA+AGG 0.482214 6_1:+89998906 Msa0897650:CDS
GTTATACCTTCAATGTCAAC+TGG 0.483288 6_1:-89998407 None:intergenic
ATTATGCTTGAATTCTTCTA+CGG 0.483355 6_1:-89998753 None:intergenic
AGTTCAAAATCAAGGGTTGC+TGG 0.483650 6_1:+89998914 Msa0897650:CDS
GATGAGCTTCAACAAGATAT+GGG 0.483739 6_1:+89999358 Msa0897650:CDS
ATAAATCTGGCATTGCTTGT+TGG 0.485761 6_1:+89997602 Msa0897650:CDS
GTTGATGGGGATCCCTGGAA+TGG 0.486571 6_1:+89995321 Msa0897650:exon
TCCGTTCCGTCTAAAGTAAA+CGG 0.488834 6_1:+89998878 Msa0897650:CDS
AGAAGGATCTCTTGGACTAT+CGG 0.489165 6_1:+89997736 Msa0897650:CDS
AGAGGCTTCTTCTGTGGTAC+AGG 0.492107 6_1:-90000243 None:intergenic
GCGTACACTGCATGGAAACC+TGG 0.492579 6_1:+89998782 Msa0897650:CDS
ATTCTCTAATGGAGGCTTGG+AGG 0.492742 6_1:+89999507 Msa0897650:CDS
TACTCTGATTTCCCATTCCA+GGG 0.497352 6_1:-89995333 None:intergenic
TTGATGGGGATCCCTGGAAT+GGG 0.498382 6_1:+89995322 Msa0897650:exon
ATCACAGGGACATGAGCATC+AGG 0.501815 6_1:-89996801 None:intergenic
GTAATGGAAAACAATGGTTA+GGG 0.502287 6_1:+89995353 Msa0897650:CDS
GCAACATTATCATACATCTC+TGG 0.504699 6_1:-89996632 None:intergenic
GAATTGCTGATTTAGGGTTA+CGG 0.506545 6_1:+89994942 Msa0897650:five_prime_UTR
GGAGCCAAAAGTGAAAATCT+TGG 0.506962 6_1:-89996345 None:intergenic
CTCACCAACCGATTTCAGAC+AGG 0.507788 6_1:-89999179 None:intergenic
GATTTGTCTGAAAATTCGCC+AGG 0.508754 6_1:-89998641 None:intergenic
CCTTAGACAATGGAAAGGTT+GGG 0.509451 6_1:+89998368 Msa0897650:CDS
AAGGAAGAGAAAGCGATTGG+AGG 0.509694 6_1:+89998997 Msa0897650:CDS
GGGACATGAGCATCAGGCAC+AGG 0.513982 6_1:-89996795 None:intergenic
GTGGTATTTGTAGGCTATGG+AGG 0.514598 6_1:+89998245 Msa0897650:intron
TCTTCAGGAACAGTCCAATT+GGG 0.514758 6_1:-89999067 None:intergenic
TTTCACAAATTCATTCATCT+GGG 0.515789 6_1:+89994903 Msa0897650:five_prime_UTR
GTATGCAAGATTGGCATTGT+GGG 0.518685 6_1:+89996860 Msa0897650:CDS
TGAAAGGAAGAGAAAGCGAT+TGG 0.520091 6_1:+89998994 Msa0897650:CDS
TCAGCAGGAGGCAGTTGGTA+GGG 0.520612 6_1:+89995724 Msa0897650:CDS
ATTCAATGAACAACTGGTGC+AGG 0.523694 6_1:+89996313 Msa0897650:CDS
TGGAGGCTTGGAGGAGCTTG+AGG 0.528787 6_1:+89999516 Msa0897650:CDS
GATATGCTGATGAAGAAGAA+AGG 0.532179 6_1:-89994646 None:intergenic
CTCGGAATCTTGCAGGTGCA+TGG 0.532952 6_1:+89996562 Msa0897650:intron
ATGTAAACGCGTACACTGCA+TGG 0.533054 6_1:+89998774 Msa0897650:CDS
TGTATGCAAGATTGGCATTG+TGG 0.533196 6_1:+89996859 Msa0897650:CDS
AAAGCTTGATGCGCTTCATA+CGG 0.537157 6_1:-89999322 None:intergenic
ATTAGATGATATCTATCTCT+GGG 0.544096 6_1:-89997779 None:intergenic
TACCTGGAGCCGATGATGAA+AGG 0.544810 6_1:+89998978 Msa0897650:CDS
AGTGCTTGGCAGACTGGACC+AGG 0.546287 6_1:+89995751 Msa0897650:CDS
TAGACGAAGTTCAAAATCAA+GGG 0.546567 6_1:+89998907 Msa0897650:CDS
GGAATGGGAAATCAGAGTAA+TGG 0.546702 6_1:+89995337 Msa0897650:CDS
GAAATTACAAGGGCTATTTG+AGG 0.554389 6_1:-90000482 None:intergenic
ACAGAAGATGCTATCTGAGA+TGG 0.554931 6_1:+89996752 Msa0897650:CDS
TGAGAATATATATGTTTCAC+CGG 0.556670 6_1:+90001119 Msa0897650:three_prime_UTR
AGGGTATCTATATCCGCTCC+AGG 0.558973 6_1:-89996586 None:intergenic
GAGTATATACTCAGTGGCGA+TGG 0.559198 6_1:+89997684 Msa0897650:CDS
ACTCATTCATTCTCTAATGG+AGG 0.559459 6_1:+89999499 Msa0897650:CDS
GAAAACCATTAGCAGGGCGA+AGG 0.559917 6_1:+89996289 Msa0897650:CDS
TTAAACTTGAATTTCATCAC+AGG 0.560441 6_1:-89996816 None:intergenic
CCGCCAGGAAATATGAAGCT+TGG 0.561384 6_1:-89998845 None:intergenic
GAGAGTCAGCAGGAGGCAGT+TGG 0.561773 6_1:+89995719 Msa0897650:CDS
AACATATTAGGAAGTGCGTT+AGG 0.562376 6_1:-89997644 None:intergenic
ATGGGTCTGCAGCGTAAGCA+AGG 0.566647 6_1:+89998689 Msa0897650:CDS
GTTGGTAGGGAGGAAGTGCT+TGG 0.568515 6_1:+89995737 Msa0897650:CDS
ACAATGCCAATCTTGCATAC+AGG 0.568625 6_1:-89996857 None:intergenic
ATCCAGACGACCTTAGACAA+TGG 0.568936 6_1:+89998358 Msa0897650:CDS
GATATAGATACCCTTTGTGT+AGG 0.571052 6_1:+89996595 Msa0897650:CDS
GCAGGAGGCAGTTGGTAGGG+AGG 0.571174 6_1:+89995727 Msa0897650:CDS
CTCTTCAAATCCAAATCTTG+CGG 0.571460 6_1:+89999435 Msa0897650:CDS
TAACGCACTTCCTAATATGT+TGG 0.574662 6_1:+89997646 Msa0897650:CDS
CAGGAACAGTCCAATTGGGA+GGG 0.574896 6_1:-89999063 None:intergenic
TTCATTGGCTGGACCAACTG+AGG 0.578208 6_1:+89995390 Msa0897650:CDS
ACCGTTTACTTTAGACGGAA+CGG 0.578621 6_1:-89998879 None:intergenic
GACCCATAAAGTAACATTGG+TGG 0.579710 6_1:-89998673 None:intergenic
TTGGTTACACTTACACCAGA+AGG 0.580585 6_1:-89999205 None:intergenic
ATGTCTAGGTCCTACACAAA+GGG 0.581429 6_1:-89996605 None:intergenic
TAGTACAAAACTTCAAATTG+GGG 0.583507 6_1:-89994974 None:intergenic
TGGAGGATAATAATACCTCA+AGG 0.584688 6_1:+89999014 Msa0897650:CDS
GCTGATGAAGAAGAAAGGAA+AGG 0.585497 6_1:-89994641 None:intergenic
TCACCAACCGATTTCAGACA+GGG 0.590667 6_1:-89999178 None:intergenic
TTTACTTTAGACGGAACGGA+AGG 0.592044 6_1:-89998875 None:intergenic
AAACCCTGTCTGAAATCGGT+TGG 0.595123 6_1:+89999175 Msa0897650:CDS
AATCAAGTCAATGATAATGG+TGG 0.599209 6_1:+89999388 Msa0897650:CDS
CTGTGTGTTCAGTACTTGCA+AGG 0.601170 6_1:+89995683 Msa0897650:intron
GAAGATGCTATCTGAGATGG+AGG 0.602586 6_1:+89996755 Msa0897650:CDS
CATGTCTAGGTCCTACACAA+AGG 0.605652 6_1:-89996606 None:intergenic
CTGATAAGAGGCTTCTTCTG+TGG 0.607608 6_1:-90000249 None:intergenic
TCTGGTGTAAGTGTAACCAA+TGG 0.607660 6_1:+89999208 Msa0897650:CDS
TGTAACCAATGGATCAGCGC+CGG 0.609814 6_1:+89999219 Msa0897650:CDS
TAGCCCTTGTAATTTCGGCA+AGG 0.612490 6_1:+90000489 Msa0897650:CDS
TTGGGTGAAAACCATTAGCA+GGG 0.613271 6_1:+89996283 Msa0897650:CDS
ACGCGATCAGAAGTGCAGAA+AGG 0.617609 6_1:-89994879 None:intergenic
GCAGACCCATAAAGTAACAT+TGG 0.618321 6_1:-89998676 None:intergenic
GACTCTGAAGTCAATAGCAT+GGG 0.619323 6_1:+89999136 Msa0897650:CDS
AGTCAATCTGAAAAGTCTCA+AGG 0.619425 6_1:+89998941 Msa0897650:CDS
CATAAAGTAACATTGGTGGA+AGG 0.620543 6_1:-89998669 None:intergenic
TGGATTGTATGAGAGTCAGC+AGG 0.620641 6_1:+89995709 Msa0897650:CDS
ACCAGACATGATATGTTCGA+TGG 0.623876 6_1:-89999299 None:intergenic
AAAACCATTAGCAGGGCGAA+GGG 0.624241 6_1:+89996290 Msa0897650:CDS
GCACAACATTAAGATTCATG+AGG 0.624305 6_1:+89997403 Msa0897650:CDS
GGACATGAGCATCAGGCACA+GGG 0.624494 6_1:-89996794 None:intergenic
TCAGGAACAGTCCAATTGGG+AGG 0.626432 6_1:-89999064 None:intergenic
AGGAACAGTCCAATTGGGAG+GGG 0.627087 6_1:-89999062 None:intergenic
GGAGGATAATAATACCTCAA+GGG 0.629854 6_1:+89999015 Msa0897650:CDS
TTATGTCAGATGAGTTCAAG+AGG 0.631066 6_1:+89997870 Msa0897650:CDS
GCAGGTGCATGGTCCTGGAG+CGG 0.634301 6_1:+89996573 Msa0897650:intron
CAGACCGTTCTCAGTCTCAA+CGG 0.637873 6_1:+89997236 Msa0897650:CDS
GGGAGGGGATACAGATGCAG+AGG 0.638680 6_1:-89999047 None:intergenic
AAACCTTGCCGAAATTACAA+GGG 0.640174 6_1:-90000492 None:intergenic
GCAGGACTTAGATATATCAC+AGG 0.640450 6_1:+89997187 Msa0897650:intron
TAAACTTGAATTTCATCACA+GGG 0.641698 6_1:-89996815 None:intergenic
TATGTCAGATGAGTTCAAGA+GGG 0.642723 6_1:+89997871 Msa0897650:CDS
GCAGGAATCCCACAAAACAA+TGG 0.650878 6_1:-90000219 None:intergenic
ATGAGCTTCAACAAGATATG+GGG 0.652530 6_1:+89999359 Msa0897650:CDS
GAAGTGCGTTAGGATAAAGC+TGG 0.655196 6_1:-89997634 None:intergenic
ACATCCGTTGAGACTGAGAA+CGG 0.658881 6_1:-89997240 None:intergenic
ATCAGAGTAATGGAAAACAA+TGG 0.661390 6_1:+89995347 Msa0897650:CDS
CAAGGAGTTCCGGTAAACGA+AGG 0.661487 6_1:+89998707 Msa0897650:CDS
TTGTAAGTAGAGTTCATGCA+AGG 0.665172 6_1:-89997824 None:intergenic
TGACTCTGAAGTCAATAGCA+TGG 0.665222 6_1:+89999135 Msa0897650:CDS
GACGACCTTAGACAATGGAA+AGG 0.674975 6_1:+89998363 Msa0897650:CDS
TCTTTAGAGTATATACTCAG+TGG 0.676098 6_1:+89997678 Msa0897650:CDS
ATACCTTCAATGTCAACTGG+CGG 0.676326 6_1:-89998404 None:intergenic
CACATCCTTAGGGAAAGCAG+TGG 0.680740 6_1:+90000942 Msa0897650:CDS
AGAGGACTTTGAAACCCTTG+AGG 0.681267 6_1:-89999029 None:intergenic
ATGTCAGATGAGTTCAAGAG+GGG 0.684064 6_1:+89997872 Msa0897650:CDS
AAAGTCTCAAGGAGGTAAAG+CGG 0.685654 6_1:+89998952 Msa0897650:CDS
ATTGTATGAGAGTCAGCAGG+AGG 0.695715 6_1:+89995712 Msa0897650:CDS
GAGGGGAACTGAAATATGCG+AGG 0.699663 6_1:+89997889 Msa0897650:CDS
CCAAGCTTCATATTTCCTGG+CGG 0.705009 6_1:+89998845 Msa0897650:CDS
CAATCTGAAAAGTCTCAAGG+AGG 0.729064 6_1:+89998944 Msa0897650:CDS
GACGTTTCACATGAGAGACG+CGG 0.736625 6_1:-89998814 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAATTAAATTAAAAATA+AGG - chr6_1:89994766-89994785 None:intergenic 0.0%
!!! TTGTTTTTATTTGAATTTAT+TGG + chr6_1:89995184-89995203 Msa0897650:five_prime_UTR 10.0%
!!! TAATTTTTTTTTCAATGATA+GGG - chr6_1:89995258-89995277 None:intergenic 10.0%
!!! ATAATTTTTTTTTCAATGAT+AGG - chr6_1:89995259-89995278 None:intergenic 10.0%
!!! ATAATAATAATGAACAATTT+TGG - chr6_1:89997511-89997530 None:intergenic 10.0%
!! TTTATAATGAATAAAAATCA+TGG - chr6_1:89998107-89998126 None:intergenic 10.0%
!!! ATATGAAGAATTTAAAATTA+AGG + chr6_1:90000622-90000641 Msa0897650:intron 10.0%
!!! TATGAAGAATTTAAAATTAA+GGG + chr6_1:90000623-90000642 Msa0897650:intron 10.0%
!! TTAAATTCTTTATATATCAA+TGG + chr6_1:90000793-90000812 Msa0897650:intron 10.0%
!!! TTTTTACGATAATAACAAAA+GGG - chr6_1:89995050-89995069 None:intergenic 15.0%
!!! AATTGTATTAATTTTGTTGA+TGG + chr6_1:89995306-89995325 Msa0897650:exon 15.0%
!!! ATTGTATTAATTTTGTTGAT+GGG + chr6_1:89995307-89995326 Msa0897650:exon 15.0%
!!! TTTTATTCTATCTTAGAAAT+AGG + chr6_1:89995805-89995824 Msa0897650:intron 15.0%
!! TTTATTCTATCTTAGAAATA+GGG + chr6_1:89995806-89995825 Msa0897650:intron 15.0%
!!! TGCAAAAATATTAATACTTT+TGG + chr6_1:89996906-89996925 Msa0897650:intron 15.0%
!!! GCAAAAATATTAATACTTTT+GGG + chr6_1:89996907-89996926 Msa0897650:intron 15.0%
!!! AATTTGTATGCTTAATTTTT+TGG + chr6_1:89997002-89997021 Msa0897650:intron 15.0%
!! GAAAAATCATTATTACTAAA+TGG - chr6_1:89997163-89997182 None:intergenic 15.0%
!! TATTGTCAATTAATTTATGT+AGG + chr6_1:89997965-89997984 Msa0897650:intron 15.0%
!!! TTTTAAAATGTTTTCGTAAA+AGG + chr6_1:89998028-89998047 Msa0897650:intron 15.0%
!! AAATAGTTATATATATGATG+AGG + chr6_1:89999615-89999634 Msa0897650:intron 15.0%
!!! TACTAATTTTTAATAACCAT+TGG + chr6_1:90000340-90000359 Msa0897650:intron 15.0%
!! ATTATGTTATAATATACCAA+TGG - chr6_1:90000359-90000378 None:intergenic 15.0%
!! CAAATATTTCTTTAAATCTA+AGG - chr6_1:90000568-90000587 None:intergenic 15.0%
!! CTTAGATTTAAAGAAATATT+TGG + chr6_1:90000566-90000585 Msa0897650:intron 15.0%
!!! ATGAAGAATTTAAAATTAAG+GGG + chr6_1:90000624-90000643 Msa0897650:intron 15.0%
!! AATCTAAATAACAACATTAA+AGG - chr6_1:90000874-90000893 None:intergenic 15.0%
!! AAAATTGTTACATAGATAAA+AGG - chr6_1:90001037-90001056 None:intergenic 15.0%
!!! TTTTATCTATGTAACAATTT+TGG + chr6_1:90001036-90001055 Msa0897650:three_prime_UTR 15.0%
!!! AAAATCTAATTTTATTTAGC+CGG - chr6_1:90001141-90001160 None:intergenic 15.0%
!!! TTTTTATTTTGAAGCTTTCA+AGG + chr6_1:89994821-89994840 Msa0897650:intron 20.0%
!! ATAGTACAAAACTTCAAATT+GGG - chr6_1:89994978-89994997 None:intergenic 20.0%
!! AATAGTACAAAACTTCAAAT+TGG - chr6_1:89994979-89994998 None:intergenic 20.0%
!!! CTTTTTACGATAATAACAAA+AGG - chr6_1:89995051-89995070 None:intergenic 20.0%
!!! TTGTATTAATTTTGTTGATG+GGG + chr6_1:89995308-89995327 Msa0897650:exon 20.0%
!! TGTAAGGAAAACAATAAAAA+TGG - chr6_1:89996532-89996551 None:intergenic 20.0%
!!! ATAAAATATGTGTTTTGTTC+TGG + chr6_1:89997102-89997121 Msa0897650:intron 20.0%
!!! ATTTATGTTAAGATTTTGTG+TGG + chr6_1:89997334-89997353 Msa0897650:intron 20.0%
!! CATGATTATATCAATATCAT+TGG - chr6_1:89997467-89997486 None:intergenic 20.0%
!!! ATTTTATTGATCTGATAGTT+TGG + chr6_1:89998081-89998100 Msa0897650:intron 20.0%
!! TTTGTTCTTATTGTGATATT+TGG + chr6_1:89998202-89998221 Msa0897650:intron 20.0%
!! TTGTTCTTATTGTGATATTT+GGG + chr6_1:89998203-89998222 Msa0897650:intron 20.0%
!! AATTCATATTGTTTCATTGA+GGG + chr6_1:89999646-89999665 Msa0897650:intron 20.0%
!! CTGAAATAAAACAATTGTTA+AGG - chr6_1:90000073-90000092 None:intergenic 20.0%
!! CATAATCTATATGAGTTTAA+TGG + chr6_1:90000373-90000392 Msa0897650:intron 20.0%
!!! ATGACTATGTAAAACTTTTT+GGG + chr6_1:90000452-90000471 Msa0897650:CDS 20.0%
!! AGATTAATCTTTGCTAAATT+TGG + chr6_1:90000889-90000908 Msa0897650:intron 20.0%
! ATTACAGAGAAGAAGAAAAA+GGG - chr6_1:89994712-89994731 None:intergenic 25.0%
! AAATAAGGAATGAAATCAGA+AGG - chr6_1:89994751-89994770 None:intergenic 25.0%
!! TTTTCACAAATTCATTCATC+TGG + chr6_1:89994902-89994921 Msa0897650:five_prime_UTR 25.0%
! TTTCACAAATTCATTCATCT+GGG + chr6_1:89994903-89994922 Msa0897650:five_prime_UTR 25.0%
! TAGTACAAAACTTCAAATTG+GGG - chr6_1:89994977-89994996 None:intergenic 25.0%
! ATAAACCGATATAGTTTCTA+GGG + chr6_1:89995848-89995867 Msa0897650:intron 25.0%
!! TTAAATCGTGTTGTTAATTG+TGG + chr6_1:89995933-89995952 Msa0897650:intron 25.0%
! AATCACTACAATCAGTATAT+CGG - chr6_1:89996164-89996183 None:intergenic 25.0%
! GGATATTACGAAATGTATAT+AGG - chr6_1:89996511-89996530 None:intergenic 25.0%
!! TCCTTACAAAATTTTTCACT+CGG + chr6_1:89996544-89996563 Msa0897650:intron 25.0%
!! ACTGTTATTGTCATTTACAT+TGG + chr6_1:89996703-89996722 Msa0897650:intron 25.0%
!! CTGTTATTGTCATTTACATT+GGG + chr6_1:89996704-89996723 Msa0897650:intron 25.0%
! TAAACTTGAATTTCATCACA+GGG - chr6_1:89996818-89996837 None:intergenic 25.0%
! TTAAACTTGAATTTCATCAC+AGG - chr6_1:89996819-89996838 None:intergenic 25.0%
!! GTGATGAAATTCAAGTTTAA+TGG + chr6_1:89996819-89996838 Msa0897650:CDS 25.0%
! TTTGCATAGAAAACTTACTT+CGG - chr6_1:89996892-89996911 None:intergenic 25.0%
!! AATAATGATTTTTCATGTGC+AGG + chr6_1:89997169-89997188 Msa0897650:intron 25.0%
!! ATTAAGATTCATGAGGTTTT+GGG + chr6_1:89997410-89997429 Msa0897650:CDS 25.0%
! ATTGATATAATCATGCATGA+TGG + chr6_1:89997472-89997491 Msa0897650:intron 25.0%
! ATTAGATGATATCTATCTCT+GGG - chr6_1:89997782-89997801 None:intergenic 25.0%
!! GTCTTAAAAATGTGTTCTTT+TGG + chr6_1:89997929-89997948 Msa0897650:intron 25.0%
! GAAGCAGTAACATTAATAAA+TGG + chr6_1:89997987-89998006 Msa0897650:intron 25.0%
! TTGCTTAAATTTGATGTTTG+TGG + chr6_1:89998226-89998245 Msa0897650:intron 25.0%
! TCTTGTAAGCTTCAAAAAAT+GGG - chr6_1:89998308-89998327 None:intergenic 25.0%
! TTCTTGTAAGCTTCAAAAAA+TGG - chr6_1:89998309-89998328 None:intergenic 25.0%
! TGATTCACGATTTGAAAAAT+AGG + chr6_1:89998547-89998566 Msa0897650:intron 25.0%
! ATTATGCTTGAATTCTTCTA+CGG - chr6_1:89998756-89998775 None:intergenic 25.0%
! AGAAATCAAGTCAATGATAA+TGG + chr6_1:89999385-89999404 Msa0897650:CDS 25.0%
! TTGAGGTTAATCTCTTATTA+TGG + chr6_1:89999533-89999552 Msa0897650:intron 25.0%
! GAATTCATATTGTTTCATTG+AGG + chr6_1:89999645-89999664 Msa0897650:intron 25.0%
!!! TTGCATTTATTTTGTCACTT+AGG + chr6_1:89999675-89999694 Msa0897650:intron 25.0%
!! TCTTATTTGAGTTTATCTAC+TGG - chr6_1:89999921-89999940 None:intergenic 25.0%
!!! ATAGTGGATCAATTGATTTT+TGG + chr6_1:90000308-90000327 Msa0897650:intron 25.0%
!! GATGACTATGTAAAACTTTT+TGG + chr6_1:90000451-90000470 Msa0897650:CDS 25.0%
!! TGACTATGTAAAACTTTTTG+GGG + chr6_1:90000453-90000472 Msa0897650:CDS 25.0%
!!! TCATATTTTAACCCTTTACA+AGG - chr6_1:90000608-90000627 None:intergenic 25.0%
!! AAGAATTTAAAATTAAGGGG+TGG + chr6_1:90000627-90000646 Msa0897650:intron 25.0%
!! ATGACTGTGTAAAACTTTTT+GGG - chr6_1:90000739-90000758 None:intergenic 25.0%
! TAATCTTTGCTAAATTTGGT+TGG + chr6_1:90000893-90000912 Msa0897650:intron 25.0%
!!! ATAAAAGTTGATGGCTTTTT+AGG - chr6_1:90001080-90001099 None:intergenic 25.0%
! AAAAGTTCGATAAAAGTTGA+TGG - chr6_1:90001089-90001108 None:intergenic 25.0%
! TGAGAATATATATGTTTCAC+CGG + chr6_1:90001119-90001138 Msa0897650:three_prime_UTR 25.0%
GATTACAGAGAAGAAGAAAA+AGG - chr6_1:89994713-89994732 None:intergenic 30.0%
TCGTAAAAAGTTCATAGCTT+TGG + chr6_1:89995061-89995080 Msa0897650:five_prime_UTR 30.0%
!! AAAAAGTTCATAGCTTTGGA+AGG + chr6_1:89995065-89995084 Msa0897650:five_prime_UTR 30.0%
! ATCAGAGTAATGGAAAACAA+TGG + chr6_1:89995347-89995366 Msa0897650:CDS 30.0%
! AGTAATGGAAAACAATGGTT+AGG + chr6_1:89995352-89995371 Msa0897650:CDS 30.0%
! GTAATGGAAAACAATGGTTA+GGG + chr6_1:89995353-89995372 Msa0897650:CDS 30.0%
AAAGACTCATGAACTTGAAA+AGG + chr6_1:89995423-89995442 Msa0897650:CDS 30.0%
ATTGCATCAACAACTAAACA+AGG - chr6_1:89995781-89995800 None:intergenic 30.0%
GATAAACCGATATAGTTTCT+AGG + chr6_1:89995847-89995866 Msa0897650:intron 30.0%
! TTCTAAATAAAAGCGCATCA+CGG + chr6_1:89996024-89996043 Msa0897650:intron 30.0%
TGAATCAGATTGTGAAGATT+TGG + chr6_1:89996264-89996283 Msa0897650:intron 30.0%
GAATCAGATTGTGAAGATTT+GGG + chr6_1:89996265-89996284 Msa0897650:intron 30.0%
! AATGCCAAGATTTTCACTTT+TGG + chr6_1:89996341-89996360 Msa0897650:CDS 30.0%
! TCCGAGTGAAAAATTTTGTA+AGG - chr6_1:89996548-89996567 None:intergenic 30.0%
! TTGTCATTTACATTGGGTTT+AGG + chr6_1:89996710-89996729 Msa0897650:intron 30.0%
TTGCATAGAAAACTTACTTC+GGG - chr6_1:89996891-89996910 None:intergenic 30.0%
ATAACCATCACCTGAATATT+TGG - chr6_1:89997296-89997315 None:intergenic 30.0%
! CATTAAGATTCATGAGGTTT+TGG + chr6_1:89997409-89997428 Msa0897650:CDS 30.0%
ATATGGCAAAAAGATGCTTT+AGG - chr6_1:89997552-89997571 None:intergenic 30.0%
! CTTTTTGCCATATTATTCAC+AGG + chr6_1:89997559-89997578 Msa0897650:intron 30.0%
!! TCTTTAGAGTATATACTCAG+TGG + chr6_1:89997678-89997697 Msa0897650:CDS 30.0%
CATTAGATGATATCTATCTC+TGG - chr6_1:89997783-89997802 None:intergenic 30.0%
TTGATGTTTGTGGTATTTGT+AGG + chr6_1:89998236-89998255 Msa0897650:intron 30.0%
TAAGCTTCAAAAAATGGGTA+CGG - chr6_1:89998303-89998322 None:intergenic 30.0%
CAATCTACAAGATTCAAACA+AGG - chr6_1:89998583-89998602 None:intergenic 30.0%
! TAGATTGAGAAGTACACTTA+TGG + chr6_1:89998596-89998615 Msa0897650:intron 30.0%
!! TTCCACCAATGTTACTTTAT+GGG + chr6_1:89998671-89998690 Msa0897650:CDS 30.0%
AAGGTGAACAGTTTGATATA+AGG + chr6_1:89998726-89998745 Msa0897650:CDS 30.0%
ATAGACGAAGTTCAAAATCA+AGG + chr6_1:89998906-89998925 Msa0897650:CDS 30.0%
TAGACGAAGTTCAAAATCAA+GGG + chr6_1:89998907-89998926 Msa0897650:CDS 30.0%
CTAAAAGGATTTCTATCTTC+AGG - chr6_1:89999085-89999104 None:intergenic 30.0%
TCTTTAGTGTTAGATGTATC+AGG - chr6_1:89999265-89999284 None:intergenic 30.0%
!! AATCAAGTCAATGATAATGG+TGG + chr6_1:89999388-89999407 Msa0897650:CDS 30.0%
!! GGAAGATCAAGTTATTTCTA+AGG + chr6_1:89999462-89999481 Msa0897650:CDS 30.0%
TCAACTCATTCATTCTCTAA+TGG + chr6_1:89999496-89999515 Msa0897650:CDS 30.0%
CTCTTATTATGGCTTATACT+TGG + chr6_1:89999544-89999563 Msa0897650:intron 30.0%
TTCTGTTTGGATAAAACACT+TGG + chr6_1:89999698-89999717 Msa0897650:intron 30.0%
TCTGTTTGGATAAAACACTT+GGG + chr6_1:89999699-89999718 Msa0897650:intron 30.0%
TTCAGGATAACTAATGAACA+CGG - chr6_1:89999819-89999838 None:intergenic 30.0%
ATTAGTTATCCTGAAGAGTA+TGG + chr6_1:89999824-89999843 Msa0897650:intron 30.0%
AACTTATTTCCATACTCTTC+AGG - chr6_1:89999836-89999855 None:intergenic 30.0%
TAACATTGTACTTGTCATAG+TGG + chr6_1:90000292-90000311 Msa0897650:intron 30.0%
TATATAACAAAGCAGCACTA+TGG - chr6_1:90000429-90000448 None:intergenic 30.0%
TCAAATAGCCCTTGTAATTT+CGG + chr6_1:90000484-90000503 Msa0897650:CDS 30.0%
! GAATGTGTTTTTCTTATCGA+GGG - chr6_1:90000526-90000545 None:intergenic 30.0%
! CACATTCCACATTGTAATTT+TGG + chr6_1:90000539-90000558 Msa0897650:intron 30.0%
AGGAATCCAAAATTACAATG+TGG - chr6_1:90000548-90000567 None:intergenic 30.0%
! TGACTGTGTAAAACTTTTTG+GGG - chr6_1:90000738-90000757 None:intergenic 30.0%
! GATGACTGTGTAAAACTTTT+TGG - chr6_1:90000740-90000759 None:intergenic 30.0%
! TTGAGATATTTTATCAGTGC+AGG + chr6_1:90000766-90000785 Msa0897650:intron 30.0%
TATTAGAAGTTGCTCCATTA+TGG + chr6_1:90000817-90000836 Msa0897650:intron 30.0%
GAATGAATTGCTATCCATAA+TGG - chr6_1:90000834-90000853 None:intergenic 30.0%
!!! GTTGGTTGAATCTTATTTTC+AGG + chr6_1:90000911-90000930 Msa0897650:intron 30.0%
!! CTATGTAACAATTTTGGTGA+AGG + chr6_1:90001042-90001061 Msa0897650:three_prime_UTR 30.0%
CTGATGAAGAAGAAAGGAAA+GGG - chr6_1:89994643-89994662 None:intergenic 35.0%
GATATGCTGATGAAGAAGAA+AGG - chr6_1:89994649-89994668 None:intergenic 35.0%
AAGGAATGAAATCAGAAGGT+AGG - chr6_1:89994747-89994766 None:intergenic 35.0%
!! TTGTTCGGAATTGCTGATTT+AGG + chr6_1:89994935-89994954 Msa0897650:five_prime_UTR 35.0%
!! TGTTCGGAATTGCTGATTTA+GGG + chr6_1:89994936-89994955 Msa0897650:five_prime_UTR 35.0%
!! GAATTGCTGATTTAGGGTTA+CGG + chr6_1:89994942-89994961 Msa0897650:five_prime_UTR 35.0%
GATAACTGAGCCAATTTCAT+TGG + chr6_1:89995375-89995394 Msa0897650:CDS 35.0%
!!! GTGTTATTTTGTGCTGACTT+CGG + chr6_1:89995657-89995676 Msa0897650:intron 35.0%
CTATCTTAGAAATAGGGAGT+AGG + chr6_1:89995812-89995831 Msa0897650:intron 35.0%
TCTGACCCTAGAAACTATAT+CGG - chr6_1:89995856-89995875 None:intergenic 35.0%
!! AGTTTCTAGGGTCAGAAAAT+TGG + chr6_1:89995860-89995879 Msa0897650:intron 35.0%
! GTGTTGTTAATTGTGGATCA+TGG + chr6_1:89995940-89995959 Msa0897650:intron 35.0%
TGTGGATCATGGAAAATAGA+TGG + chr6_1:89995951-89995970 Msa0897650:intron 35.0%
!!! TTTTCACTTTTGGCTCCTAT+CGG + chr6_1:89996351-89996370 Msa0897650:CDS 35.0%
GTACACAAACGAGAAAGATT+TGG - chr6_1:89996404-89996423 None:intergenic 35.0%
TGACGAATCACTATGAAACT+AGG + chr6_1:89996450-89996469 Msa0897650:intron 35.0%
GATATAGATACCCTTTGTGT+AGG + chr6_1:89996595-89996614 Msa0897650:CDS 35.0%
GCAACATTATCATACATCTC+TGG - chr6_1:89996635-89996654 None:intergenic 35.0%
TCATTTACATTGGGTTTAGG+AGG + chr6_1:89996713-89996732 Msa0897650:intron 35.0%
! GCGTTTAGTTCCAAATATTC+AGG + chr6_1:89997283-89997302 Msa0897650:CDS 35.0%
AGTTCCAAATATTCAGGTGA+TGG + chr6_1:89997289-89997308 Msa0897650:intron 35.0%
GCACAACATTAAGATTCATG+AGG + chr6_1:89997403-89997422 Msa0897650:CDS 35.0%
! TTTTCTGGGTGGTATAAATC+TGG + chr6_1:89997589-89997608 Msa0897650:CDS 35.0%
ATAAATCTGGCATTGCTTGT+TGG + chr6_1:89997602-89997621 Msa0897650:CDS 35.0%
! AACATATTAGGAAGTGCGTT+AGG - chr6_1:89997647-89997666 None:intergenic 35.0%
TAACGCACTTCCTAATATGT+TGG + chr6_1:89997646-89997665 Msa0897650:CDS 35.0%
AATCGAGACACCAACATATT+AGG - chr6_1:89997659-89997678 None:intergenic 35.0%
! ATGCTTTGTGCTATTGAAGA+AGG + chr6_1:89997719-89997738 Msa0897650:CDS 35.0%
GGATAAGCAGGAGTAATTAT+AGG - chr6_1:89997806-89997825 None:intergenic 35.0%
TTGTAAGTAGAGTTCATGCA+AGG - chr6_1:89997827-89997846 None:intergenic 35.0%
TTATGTCAGATGAGTTCAAG+AGG + chr6_1:89997870-89997889 Msa0897650:CDS 35.0%
TATGTCAGATGAGTTCAAGA+GGG + chr6_1:89997871-89997890 Msa0897650:CDS 35.0%
CGAGGTATGATATGATATGT+TGG + chr6_1:89997907-89997926 Msa0897650:intron 35.0%
TATTTCCACCTAGTGAGATA+AGG + chr6_1:89998151-89998170 Msa0897650:intron 35.0%
TTTGTGGTATTTGTAGGCTA+TGG + chr6_1:89998242-89998261 Msa0897650:intron 35.0%
CTGCTGTAATGTCTATTTGT+AGG - chr6_1:89998335-89998354 None:intergenic 35.0%
GTTATACCTTCAATGTCAAC+TGG - chr6_1:89998410-89998429 None:intergenic 35.0%
CATAAAGTAACATTGGTGGA+AGG - chr6_1:89998672-89998691 None:intergenic 35.0%
!! CTTCCACCAATGTTACTTTA+TGG + chr6_1:89998670-89998689 Msa0897650:CDS 35.0%
ATACCAAGCTTCATATTTCC+TGG + chr6_1:89998842-89998861 Msa0897650:CDS 35.0%
TTCTCACCGTTTACTTTAGA+CGG - chr6_1:89998887-89998906 None:intergenic 35.0%
AGTCAATCTGAAAAGTCTCA+AGG + chr6_1:89998941-89998960 Msa0897650:CDS 35.0%
CTTTCTCTTCCTTTCATCAT+CGG - chr6_1:89998990-89999009 None:intergenic 35.0%
TGGAGGATAATAATACCTCA+AGG + chr6_1:89999014-89999033 Msa0897650:CDS 35.0%
GGAGGATAATAATACCTCAA+GGG + chr6_1:89999015-89999034 Msa0897650:CDS 35.0%
CAAGAACTAGTAGCACTAAA+AGG - chr6_1:89999100-89999119 None:intergenic 35.0%
!! GCATCAAGTTGTTTGTTATC+CGG - chr6_1:89999241-89999260 None:intergenic 35.0%
ATATCTTGTTGAAGCTCATC+AGG - chr6_1:89999358-89999377 None:intergenic 35.0%
TGATGAGCTTCAACAAGATA+TGG + chr6_1:89999357-89999376 Msa0897650:CDS 35.0%
GATGAGCTTCAACAAGATAT+GGG + chr6_1:89999358-89999377 Msa0897650:CDS 35.0%
ATGAGCTTCAACAAGATATG+GGG + chr6_1:89999359-89999378 Msa0897650:CDS 35.0%
CTCTTCAAATCCAAATCTTG+CGG + chr6_1:89999435-89999454 Msa0897650:CDS 35.0%
ACTCATTCATTCTCTAATGG+AGG + chr6_1:89999499-89999518 Msa0897650:CDS 35.0%
! TTTGTCACTTAGGTTCTGTT+TGG + chr6_1:89999685-89999704 Msa0897650:intron 35.0%
CTGTTTGGATAAAACACTTG+GGG + chr6_1:89999700-89999719 Msa0897650:intron 35.0%
TCTTGGATTAAGGGATTGAT+TGG - chr6_1:89999948-89999967 None:intergenic 35.0%
GTTTGTGTGTCTTGGATTAA+GGG - chr6_1:89999957-89999976 None:intergenic 35.0%
TGTTTGTGTGTCTTGGATTA+AGG - chr6_1:89999958-89999977 None:intergenic 35.0%
! AATCATCGCTCTAAATGTGA+AGG - chr6_1:90000015-90000034 None:intergenic 35.0%
TATTGTCCATACCTGATAAG+AGG - chr6_1:90000264-90000283 None:intergenic 35.0%
GCACTATGGTCATATATGAT+TGG - chr6_1:90000415-90000434 None:intergenic 35.0%
GAAATTACAAGGGCTATTTG+AGG - chr6_1:90000485-90000504 None:intergenic 35.0%
AAACCTTGCCGAAATTACAA+GGG - chr6_1:90000495-90000514 None:intergenic 35.0%
! GGAATGTGTTTTTCTTATCG+AGG - chr6_1:90000527-90000546 None:intergenic 35.0%
AAGAAATATTTGGCCGAAGT+CGG + chr6_1:90000576-90000595 Msa0897650:intron 35.0%
TCAAATAGCCCCTGTAATTT+GGG - chr6_1:90000707-90000726 None:intergenic 35.0%
GCTGATGAAGAAGAAAGGAA+AGG - chr6_1:89994644-89994663 None:intergenic 40.0%
TACTCTGATTTCCCATTCCA+GGG - chr6_1:89995336-89995355 None:intergenic 40.0%
TTACTCTGATTTCCCATTCC+AGG - chr6_1:89995337-89995356 None:intergenic 40.0%
GGAATGGGAAATCAGAGTAA+TGG + chr6_1:89995337-89995356 Msa0897650:CDS 40.0%
TTTGTCACATCTTCCTCAGT+TGG - chr6_1:89995406-89995425 None:intergenic 40.0%
ACAACTAAACAAGGTCAACC+TGG - chr6_1:89995772-89995791 None:intergenic 40.0%
CGGAGATGTTCAATGAAGAT+TGG - chr6_1:89996144-89996163 None:intergenic 40.0%
TTTGGGTGAAAACCATTAGC+AGG + chr6_1:89996282-89996301 Msa0897650:CDS 40.0%
TTGGGTGAAAACCATTAGCA+GGG + chr6_1:89996283-89996302 Msa0897650:CDS 40.0%
GAAGGGATTCAATGAACAAC+TGG + chr6_1:89996307-89996326 Msa0897650:CDS 40.0%
ATTCAATGAACAACTGGTGC+AGG + chr6_1:89996313-89996332 Msa0897650:CDS 40.0%
GGAGCCAAAAGTGAAAATCT+TGG - chr6_1:89996348-89996367 None:intergenic 40.0%
TGTACAGACACTCTGTTGAA+AGG + chr6_1:89996419-89996438 Msa0897650:intron 40.0%
! TTTTTCACTCGGAATCTTGC+AGG + chr6_1:89996555-89996574 Msa0897650:intron 40.0%
ATGTCTAGGTCCTACACAAA+GGG - chr6_1:89996608-89996627 None:intergenic 40.0%
TGGGTTTAGGAGGATTTCTT+TGG + chr6_1:89996723-89996742 Msa0897650:intron 40.0%
ACAGAAGATGCTATCTGAGA+TGG + chr6_1:89996752-89996771 Msa0897650:CDS 40.0%
TGATCTCCTGTATGCAAGAT+TGG + chr6_1:89996851-89996870 Msa0897650:CDS 40.0%
ACAATGCCAATCTTGCATAC+AGG - chr6_1:89996860-89996879 None:intergenic 40.0%
TGTATGCAAGATTGGCATTG+TGG + chr6_1:89996859-89996878 Msa0897650:CDS 40.0%
GTATGCAAGATTGGCATTGT+GGG + chr6_1:89996860-89996879 Msa0897650:CDS 40.0%
TCGGAAGCAGATACAAAGAA+AGG - chr6_1:89996965-89996984 None:intergenic 40.0%
TTCTTGTCCACACAACTCTT+CGG - chr6_1:89996984-89997003 None:intergenic 40.0%
GCAGGACTTAGATATATCAC+AGG + chr6_1:89997187-89997206 Msa0897650:intron 40.0%
CCAGCAACCTGTGAATAATA+TGG - chr6_1:89997569-89997588 None:intergenic 40.0%
CCATATTATTCACAGGTTGC+TGG + chr6_1:89997566-89997585 Msa0897650:intron 40.0%
TCAATAGCACAAAGCATGAC+TGG - chr6_1:89997716-89997735 None:intergenic 40.0%
GCTATTGAAGAAGGATCTCT+TGG + chr6_1:89997728-89997747 Msa0897650:CDS 40.0%
AGAAGGATCTCTTGGACTAT+CGG + chr6_1:89997736-89997755 Msa0897650:CDS 40.0%
!! ATCTCTTGGACTATCGGTTT+GGG + chr6_1:89997742-89997761 Msa0897650:CDS 40.0%
!! CTATCTCTGGGATTTCTTCT+AGG - chr6_1:89997770-89997789 None:intergenic 40.0%
ATGTCAGATGAGTTCAAGAG+GGG + chr6_1:89997872-89997891 Msa0897650:CDS 40.0%
CAACCAAACCTTATCTCACT+AGG - chr6_1:89998162-89998181 None:intergenic 40.0%
ACCTTAGACAATGGAAAGGT+TGG + chr6_1:89998367-89998386 Msa0897650:CDS 40.0%
CCTTAGACAATGGAAAGGTT+GGG + chr6_1:89998368-89998387 Msa0897650:CDS 40.0%
ATACCTTCAATGTCAACTGG+CGG - chr6_1:89998407-89998426 None:intergenic 40.0%
GATTTGTCTGAAAATTCGCC+AGG - chr6_1:89998644-89998663 None:intergenic 40.0%
GACCCATAAAGTAACATTGG+TGG - chr6_1:89998676-89998695 None:intergenic 40.0%
GCAGACCCATAAAGTAACAT+TGG - chr6_1:89998679-89998698 None:intergenic 40.0%
AACTGTTCACCTTCGTTTAC+CGG - chr6_1:89998719-89998738 None:intergenic 40.0%
TTTACTTTAGACGGAACGGA+AGG - chr6_1:89998878-89998897 None:intergenic 40.0%
! TCCGTTCCGTCTAAAGTAAA+CGG + chr6_1:89998878-89998897 Msa0897650:CDS 40.0%
ACCGTTTACTTTAGACGGAA+CGG - chr6_1:89998882-89998901 None:intergenic 40.0%
AGTTCAAAATCAAGGGTTGC+TGG + chr6_1:89998914-89998933 Msa0897650:CDS 40.0%
CAATCTGAAAAGTCTCAAGG+AGG + chr6_1:89998944-89998963 Msa0897650:CDS 40.0%
AAAGTCTCAAGGAGGTAAAG+CGG + chr6_1:89998952-89998971 Msa0897650:CDS 40.0%
TGAAAGGAAGAGAAAGCGAT+TGG + chr6_1:89998994-89999013 Msa0897650:CDS 40.0%
TCTTCAGGAACAGTCCAATT+GGG - chr6_1:89999070-89999089 None:intergenic 40.0%
ATCTTCAGGAACAGTCCAAT+TGG - chr6_1:89999071-89999090 None:intergenic 40.0%
!! TGACTCTGAAGTCAATAGCA+TGG + chr6_1:89999135-89999154 Msa0897650:CDS 40.0%
!! GACTCTGAAGTCAATAGCAT+GGG + chr6_1:89999136-89999155 Msa0897650:CDS 40.0%
TTGGTTACACTTACACCAGA+AGG - chr6_1:89999208-89999227 None:intergenic 40.0%
TCTGGTGTAAGTGTAACCAA+TGG + chr6_1:89999208-89999227 Msa0897650:CDS 40.0%
ACCAGACATGATATGTTCGA+TGG - chr6_1:89999302-89999321 None:intergenic 40.0%
AAAGCTTGATGCGCTTCATA+CGG - chr6_1:89999325-89999344 None:intergenic 40.0%
AAATCCAAATCTTGCGGTAG+TGG + chr6_1:89999441-89999460 Msa0897650:CDS 40.0%
TTCATTCTCTAATGGAGGCT+TGG + chr6_1:89999504-89999523 Msa0897650:CDS 40.0%
ATGCAGTTGTTTGTGTGTCT+TGG - chr6_1:89999965-89999984 None:intergenic 40.0%
!! TGACTGCACCATTGTTTTGT+GGG + chr6_1:90000211-90000230 Msa0897650:CDS 40.0%
AAGAAGCCTCTTATCAGGTA+TGG + chr6_1:90000255-90000274 Msa0897650:intron 40.0%
CAAACCTTGCCGAAATTACA+AGG - chr6_1:90000496-90000515 None:intergenic 40.0%
!! TACAAGGCTTTTTCCGACTT+CGG - chr6_1:90000592-90000611 None:intergenic 40.0%
! AGTCGGAAAAAGCCTTGTAA+AGG + chr6_1:90000593-90000612 Msa0897650:intron 40.0%
! GTCGGAAAAAGCCTTGTAAA+GGG + chr6_1:90000594-90000613 Msa0897650:intron 40.0%
AAATTAAGGGGTGGAATCTG+TGG + chr6_1:90000636-90000655 Msa0897650:intron 40.0%
CTCAAATAGCCCCTGTAATT+TGG - chr6_1:90000708-90000727 None:intergenic 40.0%
CAAATTACAGGGGCTATTTG+AGG + chr6_1:90000706-90000725 Msa0897650:intron 40.0%
AGGTTGAACTTCACATCCTT+AGG + chr6_1:90000931-90000950 Msa0897650:intron 40.0%
GGTTGAACTTCACATCCTTA+GGG + chr6_1:90000932-90000951 Msa0897650:intron 40.0%
! TTTTTCCACTGCTTTCCCTA+AGG - chr6_1:90000950-90000969 None:intergenic 40.0%
!!! AGTTGATGGCTTTTTAGGAC+AGG - chr6_1:90001075-90001094 None:intergenic 40.0%
TCTGGGTCATCGAGATTGTT+CGG + chr6_1:89994920-89994939 Msa0897650:five_prime_UTR 45.0%
!! ATTTTGTTGATGGGGATCCC+TGG + chr6_1:89995316-89995335 Msa0897650:exon 45.0%
ACTGAGCCAATTTCATTGGC+TGG + chr6_1:89995379-89995398 Msa0897650:CDS 45.0%
GTTGGTCCAGCCAATGAAAT+TGG - chr6_1:89995388-89995407 None:intergenic 45.0%
CAATGTGTTAGCGTCGTGTT+TGG - chr6_1:89995516-89995535 None:intergenic 45.0%
GTTAGTGTCGTGTCATGTGT+TGG + chr6_1:89995585-89995604 Msa0897650:intron 45.0%
! GCACTGACACTTCTTATCGA+AGG - chr6_1:89995623-89995642 None:intergenic 45.0%
CTGTGTGTTCAGTACTTGCA+AGG + chr6_1:89995683-89995702 Msa0897650:intron 45.0%
TGGATTGTATGAGAGTCAGC+AGG + chr6_1:89995709-89995728 Msa0897650:CDS 45.0%
ATTGTATGAGAGTCAGCAGG+AGG + chr6_1:89995712-89995731 Msa0897650:CDS 45.0%
TTCAAATTTCGCTGCGCTTC+AGG + chr6_1:89996062-89996081 Msa0897650:intron 45.0%
AAAACCATTAGCAGGGCGAA+GGG + chr6_1:89996290-89996309 Msa0897650:CDS 45.0%
CATGTCTAGGTCCTACACAA+AGG - chr6_1:89996609-89996628 None:intergenic 45.0%
ACATCTCTGGTTGCATGTCT+AGG - chr6_1:89996622-89996641 None:intergenic 45.0%
! GAAGATGCTATCTGAGATGG+AGG + chr6_1:89996755-89996774 Msa0897650:CDS 45.0%
ACATCCGTTGAGACTGAGAA+CGG - chr6_1:89997243-89997262 None:intergenic 45.0%
!!! TTCACAGGTTGCTGGTTTTC+TGG + chr6_1:89997574-89997593 Msa0897650:intron 45.0%
!!! TCACAGGTTGCTGGTTTTCT+GGG + chr6_1:89997575-89997594 Msa0897650:intron 45.0%
GAAGTGCGTTAGGATAAAGC+TGG - chr6_1:89997637-89997656 None:intergenic 45.0%
GAGTATATACTCAGTGGCGA+TGG + chr6_1:89997684-89997703 Msa0897650:CDS 45.0%
GCACAAAGCATGACTGGATT+TGG - chr6_1:89997710-89997729 None:intergenic 45.0%
! GATCTCTTGGACTATCGGTT+TGG + chr6_1:89997741-89997760 Msa0897650:CDS 45.0%
GAGTTCATGCAAGGATAAGC+AGG - chr6_1:89997818-89997837 None:intergenic 45.0%
CCAAACCTTATCTCACTAGG+TGG - chr6_1:89998159-89998178 None:intergenic 45.0%
CCACCTAGTGAGATAAGGTT+TGG + chr6_1:89998156-89998175 Msa0897650:intron 45.0%
GTGGTATTTGTAGGCTATGG+AGG + chr6_1:89998245-89998264 Msa0897650:intron 45.0%
ATCCAGACGACCTTAGACAA+TGG + chr6_1:89998358-89998377 Msa0897650:CDS 45.0%
! TTCCATTGTCTAAGGTCGTC+TGG - chr6_1:89998363-89998382 None:intergenic 45.0%
GACGACCTTAGACAATGGAA+AGG + chr6_1:89998363-89998382 Msa0897650:CDS 45.0%
CCCAACCTTTCCATTGTCTA+AGG - chr6_1:89998371-89998390 None:intergenic 45.0%
ATGTAAACGCGTACACTGCA+TGG + chr6_1:89998774-89998793 Msa0897650:CDS 45.0%
CCAAGCTTCATATTTCCTGG+CGG + chr6_1:89998845-89998864 Msa0897650:CDS 45.0%
AAGGAAGAGAAAGCGATTGG+AGG + chr6_1:89998997-89999016 Msa0897650:CDS 45.0%
!! AGAGGACTTTGAAACCCTTG+AGG - chr6_1:89999032-89999051 None:intergenic 45.0%
! CGAGAAACCCTGTCTGAAAT+CGG + chr6_1:89999171-89999190 Msa0897650:CDS 45.0%
! AAACCCTGTCTGAAATCGGT+TGG + chr6_1:89999175-89999194 Msa0897650:CDS 45.0%
! TCACCAACCGATTTCAGACA+GGG - chr6_1:89999181-89999200 None:intergenic 45.0%
GCCATCGAACATATCATGTC+TGG + chr6_1:89999298-89999317 Msa0897650:CDS 45.0%
TCTTCCACTACCGCAAGATT+TGG - chr6_1:89999448-89999467 None:intergenic 45.0%
ATTCTCTAATGGAGGCTTGG+AGG + chr6_1:89999507-89999526 Msa0897650:CDS 45.0%
CACTTGTCTGAGAGAGCTTA+TGG - chr6_1:89999892-89999911 None:intergenic 45.0%
!! CTGACTGCACCATTGTTTTG+TGG + chr6_1:90000210-90000229 Msa0897650:CDS 45.0%
GCAGGAATCCCACAAAACAA+TGG - chr6_1:90000222-90000241 None:intergenic 45.0%
CTGATAAGAGGCTTCTTCTG+TGG - chr6_1:90000252-90000271 None:intergenic 45.0%
CACAGAAGAAGCCTCTTATC+AGG + chr6_1:90000250-90000269 Msa0897650:CDS 45.0%
TAGCCCTTGTAATTTCGGCA+AGG + chr6_1:90000489-90000508 Msa0897650:CDS 45.0%
AATAGCCCCTGTAATTTGGG+CGG - chr6_1:90000704-90000723 None:intergenic 45.0%
TGCGAGCGATGATATGGCTT+TGG - chr6_1:89994689-89994708 None:intergenic 50.0%
! AAAGGGTGCGAGCGATGATA+TGG - chr6_1:89994695-89994714 None:intergenic 50.0%
! ACGCGATCAGAAGTGCAGAA+AGG - chr6_1:89994882-89994901 None:intergenic 50.0%
TTGATGGGGATCCCTGGAAT+GGG + chr6_1:89995322-89995341 Msa0897650:exon 50.0%
! TTCATTGGCTGGACCAACTG+AGG + chr6_1:89995390-89995409 Msa0897650:CDS 50.0%
GTTCAGTACTTGCAAGGTGC+TGG + chr6_1:89995689-89995708 Msa0897650:intron 50.0%
GAAAACCATTAGCAGGGCGA+AGG + chr6_1:89996289-89996308 Msa0897650:CDS 50.0%
!!! ACTTTTGGCTCCTATCGGCT+AGG + chr6_1:89996356-89996375 Msa0897650:CDS 50.0%
!!! CTTTTGGCTCCTATCGGCTA+GGG + chr6_1:89996357-89996376 Msa0897650:CDS 50.0%
!!! TTTTGGCTCCTATCGGCTAG+GGG + chr6_1:89996358-89996377 Msa0897650:CDS 50.0%
! AGGGTATCTATATCCGCTCC+AGG - chr6_1:89996589-89996608 None:intergenic 50.0%
ATCACAGGGACATGAGCATC+AGG - chr6_1:89996804-89996823 None:intergenic 50.0%
TCTGCTTCCGAAGAGTTGTG+TGG + chr6_1:89996974-89996993 Msa0897650:intron 50.0%
CAGACCGTTCTCAGTCTCAA+CGG + chr6_1:89997236-89997255 Msa0897650:CDS 50.0%
GAGGGGAACTGAAATATGCG+AGG + chr6_1:89997889-89997908 Msa0897650:CDS 50.0%
TGGAGGCTAGCAAAGCTGAT+TGG + chr6_1:89998262-89998281 Msa0897650:CDS 50.0%
GGAGGCTAGCAAAGCTGATT+GGG + chr6_1:89998263-89998282 Msa0897650:CDS 50.0%
TCTCCGCCAGTTGACATTGA+AGG + chr6_1:89998401-89998420 Msa0897650:CDS 50.0%
CAAGGAGTTCCGGTAAACGA+AGG + chr6_1:89998707-89998726 Msa0897650:CDS 50.0%
GACGTTTCACATGAGAGACG+CGG - chr6_1:89998817-89998836 None:intergenic 50.0%
CCGCCAGGAAATATGAAGCT+TGG - chr6_1:89998848-89998867 None:intergenic 50.0%
TACCTGGAGCCGATGATGAA+AGG + chr6_1:89998978-89998997 Msa0897650:CDS 50.0%
!! TTCCTTTCATCATCGGCTCC+AGG - chr6_1:89998983-89999002 None:intergenic 50.0%
CATCTGTATCCCCTCCCAAT+TGG + chr6_1:89999053-89999072 Msa0897650:CDS 50.0%
AGGAACAGTCCAATTGGGAG+GGG - chr6_1:89999065-89999084 None:intergenic 50.0%
CAGGAACAGTCCAATTGGGA+GGG - chr6_1:89999066-89999085 None:intergenic 50.0%
TCAGGAACAGTCCAATTGGG+AGG - chr6_1:89999067-89999086 None:intergenic 50.0%
! CTCACCAACCGATTTCAGAC+AGG - chr6_1:89999182-89999201 None:intergenic 50.0%
!! TCGGTTGGTGAGATTCCTTC+TGG + chr6_1:89999190-89999209 Msa0897650:CDS 50.0%
TGTAACCAATGGATCAGCGC+CGG + chr6_1:89999219-89999238 Msa0897650:CDS 50.0%
TTCTTCTGTGGTACAGGAGC+AGG - chr6_1:90000240-90000259 None:intergenic 50.0%
AGAGGCTTCTTCTGTGGTAC+AGG - chr6_1:90000246-90000265 None:intergenic 50.0%
AGACCTCCGCCCAAATTACA+GGG + chr6_1:90000695-90000714 Msa0897650:intron 50.0%
CACATCCTTAGGGAAAGCAG+TGG + chr6_1:90000942-90000961 Msa0897650:CDS 50.0%
! GTTGATGGGGATCCCTGGAA+TGG + chr6_1:89995321-89995340 Msa0897650:exon 55.0%
! TCAGCAGGAGGCAGTTGGTA+GGG + chr6_1:89995724-89995743 Msa0897650:CDS 55.0%
!! GTTGGTAGGGAGGAAGTGCT+TGG + chr6_1:89995737-89995756 Msa0897650:CDS 55.0%
GAATCCCTTCGCCCTGCTAA+TGG - chr6_1:89996297-89996316 None:intergenic 55.0%
CTCGGAATCTTGCAGGTGCA+TGG + chr6_1:89996562-89996581 Msa0897650:intron 55.0%
ATCTTGCAGGTGCATGGTCC+TGG + chr6_1:89996568-89996587 Msa0897650:intron 55.0%
GGACATGAGCATCAGGCACA+GGG - chr6_1:89996797-89996816 None:intergenic 55.0%
!!! AGGTTTTGGGCAAAGCGTCG+TGG + chr6_1:89997423-89997442 Msa0897650:CDS 55.0%
!!! CAGGTTGCTGGTTTTCTGGG+TGG + chr6_1:89997578-89997597 Msa0897650:intron 55.0%
ATGGGTCTGCAGCGTAAGCA+AGG + chr6_1:89998689-89998708 Msa0897650:CDS 55.0%
GCAGCGTAAGCAAGGAGTTC+CGG + chr6_1:89998697-89998716 Msa0897650:CDS 55.0%
GCGTACACTGCATGGAAACC+TGG + chr6_1:89998782-89998801 Msa0897650:CDS 55.0%
GAGACGCGGATGTTCATTCC+AGG - chr6_1:89998803-89998822 None:intergenic 55.0%
GGAGGTAAAGCGGTTGTACC+TGG + chr6_1:89998962-89998981 Msa0897650:CDS 55.0%
!! GTTATCCGGCGCTGATCCAT+TGG - chr6_1:89999227-89999246 None:intergenic 55.0%
AATGGTGCAGTCAGCTCAGC+AGG - chr6_1:90000204-90000223 None:intergenic 55.0%
CAGACCTCCGCCCAAATTAC+AGG + chr6_1:90000694-90000713 Msa0897650:intron 55.0%
GACCTCCGCCCAAATTACAG+GGG + chr6_1:90000696-90000715 Msa0897650:intron 55.0%
GAGAGTCAGCAGGAGGCAGT+TGG + chr6_1:89995719-89995738 Msa0897650:CDS 60.0%
GTCAGCAGGAGGCAGTTGGT+AGG + chr6_1:89995723-89995742 Msa0897650:CDS 60.0%
!! GGAGGAAGTGCTTGGCAGAC+TGG + chr6_1:89995745-89995764 Msa0897650:CDS 60.0%
AGTGCTTGGCAGACTGGACC+AGG + chr6_1:89995751-89995770 Msa0897650:CDS 60.0%
! GCTCCTATCGGCTAGGGGTA+CGG + chr6_1:89996363-89996382 Msa0897650:intron 60.0%
GGGACATGAGCATCAGGCAC+AGG - chr6_1:89996798-89996817 None:intergenic 60.0%
GGGAGGGGATACAGATGCAG+AGG - chr6_1:89999050-89999069 None:intergenic 60.0%
TGGAGGCTTGGAGGAGCTTG+AGG + chr6_1:89999516-89999535 Msa0897650:CDS 60.0%
AGCCCCTGTAATTTGGGCGG+AGG - chr6_1:90000701-90000720 None:intergenic 60.0%
!! GCAGGAGGCAGTTGGTAGGG+AGG + chr6_1:89995727-89995746 Msa0897650:CDS 65.0%
GCTCCGTACCCCTAGCCGAT+AGG - chr6_1:89996369-89996388 None:intergenic 65.0%
GCAGGTGCATGGTCCTGGAG+CGG + chr6_1:89996573-89996592 Msa0897650:intron 65.0%
ACGGAAGGTCGAACGCCGCC+AGG - chr6_1:89998863-89998882 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 89994638 90001181 89994638 ID=Msa0897650;Name=Msa0897650
chr6_1 mRNA 89994638 90001181 89994638 ID=Msa0897650-mRNA-1;Parent=Msa0897650;Name=Msa0897650-mRNA-1;_AED=0.11;_eAED=0.11;_QI=579|0.84|0.92|0.92|0.92|0.85|14|186|784
chr6_1 exon 89994638 89994726 89994638 ID=Msa0897650-mRNA-1:exon:15306;Parent=Msa0897650-mRNA-1
chr6_1 exon 89994835 89995444 89994835 ID=Msa0897650-mRNA-1:exon:15307;Parent=Msa0897650-mRNA-1
chr6_1 exon 89995695 89995772 89995695 ID=Msa0897650-mRNA-1:exon:15308;Parent=Msa0897650-mRNA-1
chr6_1 exon 89996272 89996379 89996272 ID=Msa0897650-mRNA-1:exon:15309;Parent=Msa0897650-mRNA-1
chr6_1 exon 89996577 89996639 89996577 ID=Msa0897650-mRNA-1:exon:15310;Parent=Msa0897650-mRNA-1
chr6_1 exon 89996732 89996893 89996732 ID=Msa0897650-mRNA-1:exon:15311;Parent=Msa0897650-mRNA-1
chr6_1 exon 89997191 89997304 89997191 ID=Msa0897650-mRNA-1:exon:15312;Parent=Msa0897650-mRNA-1
chr6_1 exon 89997396 89997458 89997396 ID=Msa0897650-mRNA-1:exon:15313;Parent=Msa0897650-mRNA-1
chr6_1 exon 89997581 89997910 89997581 ID=Msa0897650-mRNA-1:exon:15314;Parent=Msa0897650-mRNA-1
chr6_1 exon 89998258 89998422 89998258 ID=Msa0897650-mRNA-1:exon:15315;Parent=Msa0897650-mRNA-1
chr6_1 exon 89998599 89999537 89998599 ID=Msa0897650-mRNA-1:exon:15316;Parent=Msa0897650-mRNA-1
chr6_1 exon 90000201 90000271 90000201 ID=Msa0897650-mRNA-1:exon:15317;Parent=Msa0897650-mRNA-1
chr6_1 exon 90000432 90000510 90000432 ID=Msa0897650-mRNA-1:exon:15318;Parent=Msa0897650-mRNA-1
chr6_1 exon 90000933 90001181 90000933 ID=Msa0897650-mRNA-1:exon:15319;Parent=Msa0897650-mRNA-1
chr6_1 five_prime_UTR 89994638 89994726 89994638 ID=Msa0897650-mRNA-1:five_prime_utr;Parent=Msa0897650-mRNA-1
chr6_1 five_prime_UTR 89994835 89995324 89994835 ID=Msa0897650-mRNA-1:five_prime_utr;Parent=Msa0897650-mRNA-1
chr6_1 CDS 89995325 89995444 89995325 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 CDS 89995695 89995772 89995695 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 CDS 89996272 89996379 89996272 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 CDS 89996577 89996639 89996577 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 CDS 89996732 89996893 89996732 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 CDS 89997191 89997304 89997191 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 CDS 89997396 89997458 89997396 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 CDS 89997581 89997910 89997581 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 CDS 89998258 89998422 89998258 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 CDS 89998599 89999537 89998599 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 CDS 90000201 90000271 90000201 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 CDS 90000432 90000510 90000432 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 CDS 90000933 90000995 90000933 ID=Msa0897650-mRNA-1:cds;Parent=Msa0897650-mRNA-1
chr6_1 three_prime_UTR 90000996 90001181 90000996 ID=Msa0897650-mRNA-1:three_prime_utr;Parent=Msa0897650-mRNA-1
Gene Sequence

>Msa0897650

ATGGGGATCCCTGGAATGGGAAATCAGAGTAATGGAAAACAATGGTTAGGGATAACTGAGCCAATTTCATTGGCTGGACCAACTGAGGAAGATGTGACAAAGACTCATGAACTTGAAAAGTACTTGCAAGGTGCTGGATTGTATGAGAGTCAGCAGGAGGCAGTTGGTAGGGAGGAAGTGCTTGGCAGACTGGACCAGATTGTGAAGATTTGGGTGAAAACCATTAGCAGGGCGAAGGGATTCAATGAACAACTGGTGCAGGAAGCAAATGCCAAGATTTTCACTTTTGGCTCCTATCGGCTAGGGGTGCATGGTCCTGGAGCGGATATAGATACCCTTTGTGTAGGACCTAGACATGCAACCAGAGATGAGGATTTCTTTGGTGAGCTACAGAAGATGCTATCTGAGATGGAGGAAGTAACTGAATTGCACCCTGTGCCTGATGCTCATGTCCCTGTGATGAAATTCAAGTTTAATGGAGTTTCTGTTGATCTCCTGTATGCAAGATTGGCATTGTGGGTTATTCCCGAAGACTTAGATATATCACAGGAATCAATATTACAAAATGTAGATGAACAGACCGTTCTCAGTCTCAACGGATGTAGAGTAACTGATCAAGTCTTGCGTTTAGTTCCAAATATTCAGAATTTTCGCACAACATTAAGATTCATGAGGTTTTGGGCAAAGCGTCGTGGTGTTTATTCAAATGTTGCTGGTTTTCTGGGTGGTATAAATCTGGCATTGCTTGTTGGTCGAATATGCCAGCTTTATCCTAACGCACTTCCTAATATGTTGGTGTCTCGATTCTTTAGAGTATATACTCAGTGGCGATGGCCAAATCCAGTCATGCTTTGTGCTATTGAAGAAGGATCTCTTGGACTATCGGTTTGGGATCCTAGAAGAAATCCCAGAGATAGATATCATCTAATGCCTATAATTACTCCTGCTTATCCTTGCATGAACTCTACTTACAATGTGACAACAAGTACACTGCGTATTATGTCAGATGAGTTCAAGAGGGGAACTGAAATATGCGAGGCTATGGAGGCTAGCAAAGCTGATTGGGATACTCTTTTTGAGCCGTACCCATTTTTTGAAGCTTACAAGAATTACCTACAAATAGACATTACAGCAGAGAATCCAGACGACCTTAGACAATGGAAAGGTTGGGTTGAGTCTCGTCTCCGCCAGTTGACATTGAAGATTGAGAAGTACACTTATGGTATGCTTCAGTGTCACCCGTATCCTGGCGAATTTTCAGACAAATCTAGATCCTTCCACCAATGTTACTTTATGGGTCTGCAGCGTAAGCAAGGAGTTCCGGTAAACGAAGGTGAACAGTTTGATATAAGGCAAACCGTAGAAGAATTCAAGCATAATGTAAACGCGTACACTGCATGGAAACCTGGAATGAACATCCGCGTCTCTCATGTGAAACGTCGTAACATACCAAGCTTCATATTTCCTGGCGGCGTTCGACCTTCCGTTCCGTCTAAAGTAAACGGTGAGAATAGACGAAGTTCAAAATCAAGGGTTGCTGGTCAAAGTCAATCTGAAAAGTCTCAAGGAGGTAAAGCGGTTGTACCTGGAGCCGATGATGAAAGGAAGAGAAAGCGATTGGAGGATAATAATACCTCAAGGGTTTCAAAGTCCTCTGCATCTGTATCCCCTCCCAATTGGACTGTTCCTGAAGATAGAAATCCTTTTAGTGCTACTAGTTCTTGTTCTATGAAATTTGATGACTCTGAAGTCAATAGCATGGGTGATCAAAAGATCGAGAAACCCTGTCTGAAATCGGTTGGTGAGATTCCTTCTGGTGTAAGTGTAACCAATGGATCAGCGCCGGATAACAAACAACTTGATGCTCCTGATACATCTAACACTAAAGAAGAAGAACGAATAGCCATCGAACATATCATGTCTGGTCCGTATGAAGCGCATCAAGCTTTGACAGAAGAACCTGATGAGCTTCAACAAGATATGGGGTATAGAAATCAAGTCAATGATAATGGTGGAAGTGTGAAAAGCAACAACTTTGACTCTTCAAATCCAAATCTTGCGGTAGTGGAAGATCAAGTTATTTCTAAGGAGACAGTATGTTCAACTCATTCATTCTCTAATGGAGGCTTGGAGGAGCTTGAGCCTGCTGAGCTGACTGCACCATTGTTTTGTGGGATTCCTGCTCCTGTACCACAGAAGAAGCCTCTTATCAGTGCTGCTTTGTTATATATCGATGACTATGTAAAACTTTTTGGGGTTAATACCTCAAATAGCCCTTGTAATTTCGGCAAGGTTGAACTTCACATCCTTAGGGAAAGCAGTGGAAAAAAGCACTTAAGAGACTTCAAAGCTTAA
Protein sequence

>Msa0897650

MGIPGMGNQSNGKQWLGITEPISLAGPTEEDVTKTHELEKYLQGAGLYESQQEAVGREEVLGRLDQIVKIWVKTISRAKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELQKMLSEMEEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQNVDEQTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINLALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHLMPIITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKADWDTLFEPYPFFEAYKNYLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSFHQCYFMGLQRKQGVPVNEGEQFDIRQTVEEFKHNVNAYTAWKPGMNIRVSHVKRRNIPSFIFPGGVRPSVPSKVNGENRRSSKSRVAGQSQSEKSQGGKAVVPGADDERKRKRLEDNNTSRVSKSSASVSPPNWTVPEDRNPFSATSSCSMKFDDSEVNSMGDQKIEKPCLKSVGEIPSGVSVTNGSAPDNKQLDAPDTSNTKEEERIAIEHIMSGPYEAHQALTEEPDELQQDMGYRNQVNDNGGSVKSNNFDSSNPNLAVVEDQVISKETVCSTHSFSNGGLEELEPAELTAPLFCGIPAPVPQKKPLISAALLYIDDYVKLFGVNTSNSPCNFGKVELHILRESSGKKHLRDFKA*