AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1215920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215920 MtrunA17_Chr4g0065291 97.118 798 23 0 1 798 47 844 0.0 1568
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215920 AT3G09850.1 43.905 804 378 19 14 798 32 781 2.66e-159 483

Find 200 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGCTCCATTCACGATTAT+TGG 0.140175 8_1:+77377081 Msa1215920:five_prime_UTR
AATGGATTTGCAAAATCTTT+AGG 0.181125 8_1:+77377546 Msa1215920:CDS
ATGGATTTGCAAAATCTTTA+GGG 0.233644 8_1:+77377547 Msa1215920:CDS
AAAGGAACGTGCTTCTTTAC+AGG 0.253397 8_1:-77378932 None:intergenic
TCCTCTTCCAATCGCAATTC+AGG 0.259203 8_1:+77377259 Msa1215920:CDS
GTGTCTTCTAGTAGAAATTC+AGG 0.268370 8_1:+77378515 Msa1215920:CDS
AGTCGTACCATGAATTCTTT+TGG 0.270768 8_1:-77379068 None:intergenic
TTTCTCGGTTTCCTCATTCT+TGG 0.273772 8_1:+77379017 Msa1215920:CDS
ACCAACTCTTGAAGAACTTT+TGG 0.277807 8_1:-77383296 None:intergenic
TTTCTAGCAGAAATGGTTCT+TGG 0.283239 8_1:-77378986 None:intergenic
TTTGTTGAAGGTTCAGGATT+AGG 0.287935 8_1:+77383502 Msa1215920:CDS
GAAATTGGAAAAGATTGTTT+TGG 0.294257 8_1:+77380708 Msa1215920:intron
AGACAGCAAGAACTTCAATT+TGG 0.300216 8_1:+77382851 Msa1215920:CDS
ATGGGATTTGTTGAAGGTTC+AGG 0.301295 8_1:+77383496 Msa1215920:CDS
GGTGGTTCAAATAACAAATC+TGG 0.308507 8_1:+77377489 Msa1215920:CDS
ATCAGGTCATCCAGAGTAAA+AGG 0.316507 8_1:-77378950 None:intergenic
CGGAGTAGCAGCCAAAGTTC+TGG 0.319995 8_1:+77381813 Msa1215920:CDS
AGAACCAACATCCTTCTTAA+AGG 0.321074 8_1:-77378444 None:intergenic
AACCAAGTGATTTCGGCCTT+TGG 0.328127 8_1:-77383204 None:intergenic
AAGGACGATGAATCTAAAAC+TGG 0.336724 8_1:-77378425 None:intergenic
TTTCGTGAACTTCAGTTGTT+AGG 0.336856 8_1:+77382719 Msa1215920:intron
GGATCTTCAACTTCAGGTAT+TGG 0.337942 8_1:+77383379 Msa1215920:CDS
GGATCTTCAACTTCAGGTAT+TGG 0.337942 8_1:+77383424 Msa1215920:CDS
GAAAAGCATACAAAGGGGTT+TGG 0.343492 8_1:+77383454 Msa1215920:CDS
GAGGTACACACTACTGGTTT+TGG 0.344696 8_1:+77383094 Msa1215920:CDS
ACACCCAAACCAAGTGATTT+CGG 0.348497 8_1:-77383211 None:intergenic
CAAGACGCCTCCAGGGAATA+TGG 0.351405 8_1:+77378878 Msa1215920:CDS
AAGGCCGAAATCACTTGGTT+TGG 0.353723 8_1:+77383207 Msa1215920:CDS
CTGCTCCATTGGGCGCTGTT+CGG 0.353983 8_1:+77383545 Msa1215920:CDS
CAGGTCTTTGCCTCCATGGT+TGG 0.354838 8_1:-77378913 None:intergenic
AGTTCTTTGGTGTCTTGCTC+TGG 0.357335 8_1:-77382874 None:intergenic
ATGCTTCTTTCTAGCAGAAA+TGG 0.362301 8_1:-77378993 None:intergenic
ATCACTGTTAAAAGTTATCT+AGG 0.363064 8_1:+77383710 Msa1215920:three_prime_UTR
CTACTAGAAGACACCTTTGA+TGG 0.365401 8_1:-77378506 None:intergenic
AGGTGGATTCTTATCCGATT+GGG 0.368932 8_1:+77377231 Msa1215920:CDS
CGTAAAGTGAAGGACAATAG+AGG 0.374143 8_1:+77382914 Msa1215920:CDS
AGGTCTTTGCCTCCATGGTT+GGG 0.375090 8_1:-77378912 None:intergenic
GAAGTCTCGCGTGGTGGGAT+TGG 0.375705 8_1:+77378152 Msa1215920:CDS
ACAACATCATCGATGCAAAA+TGG 0.376876 8_1:+77378762 Msa1215920:CDS
TCCACACTGTTCTGCTTTGA+AGG 0.386666 8_1:-77378275 None:intergenic
TGAGGTTGCAGAAGATTATC+TGG 0.387013 8_1:+77378721 Msa1215920:CDS
ACAAAAGGATCTTCAACTTC+AGG 0.387800 8_1:+77383373 Msa1215920:CDS
CTAGAAAGAAGCATGTTTCT+CGG 0.388329 8_1:+77379002 Msa1215920:CDS
TCTCTGCTGACTGAGTTCTT+TGG 0.389286 8_1:-77382887 None:intergenic
GTTACCAAAGTCACGAGGAT+TGG 0.390377 8_1:+77383567 Msa1215920:CDS
GAGCAATTATTTGATTCTGC+TGG 0.392126 8_1:-77378235 None:intergenic
ATTACATCTAAATTAACCTT+TGG 0.393075 8_1:-77383593 None:intergenic
TCATCTGACTCGTCCACAAC+AGG 0.393180 8_1:-77378794 None:intergenic
AAGTCTCGCGTGGTGGGATT+GGG 0.395645 8_1:+77378153 Msa1215920:CDS
CTCACCGACTTCTTGTTCAT+AGG 0.395763 8_1:-77382779 None:intergenic
TGATCTTGAGAAAATTAATT+CGG 0.397477 8_1:+77379741 Msa1215920:CDS
AGGCCGAAATCACTTGGTTT+GGG 0.399080 8_1:+77383208 Msa1215920:CDS
CGGCCTTTGGATAACCTCAA+TGG 0.399137 8_1:-77383191 None:intergenic
AAAGCCTCCAAAAGAATTCA+TGG 0.406585 8_1:+77379061 Msa1215920:CDS
TTTACAGGTCTTTGCCTCCA+TGG 0.407110 8_1:-77378917 None:intergenic
AGTAGAAGAGGAAGAGGTAG+AGG 0.409250 8_1:+77377124 Msa1215920:CDS
TCAGGGTTTCTTTCCATTGG+TGG 0.412402 8_1:+77378533 Msa1215920:CDS
ACCAATACTTGAAGAGCCTT+TGG 0.416078 8_1:-77383335 None:intergenic
GGTGAGGCTTTGGAGAAGTT+GGG 0.423356 8_1:+77378842 Msa1215920:CDS
ATTTGGGTTGCAGGTAGAAA+TGG 0.424728 8_1:+77377468 Msa1215920:intron
TTGCTTCCAATAATCGTGAA+TGG 0.425976 8_1:-77377087 None:intergenic
GGCCTTTGGATAACCTCAAT+GGG 0.431755 8_1:-77383190 None:intergenic
GGTGGAAGTAGAAGAGGAAG+AGG 0.434037 8_1:+77377118 Msa1215920:CDS
ATCAAAGATGATGGCAAAGA+TGG 0.434528 8_1:+77383477 Msa1215920:CDS
TTATTCTTCACCTGATGTAC+AGG 0.436427 8_1:+77377587 Msa1215920:CDS
TATCCCTTCAAGACGCCTCC+AGG 0.442079 8_1:+77378870 Msa1215920:CDS
GACTGATAGTGCAGATAAGA+AGG 0.443037 8_1:+77383039 Msa1215920:CDS
ACAAGGTATTACTGCTCCAT+TGG 0.445783 8_1:+77383534 Msa1215920:CDS
CGGTAGCTATGGTGAGGCTT+TGG 0.449089 8_1:+77378832 Msa1215920:CDS
ACCAAAGGCTCTTCAAGTAT+TGG 0.451271 8_1:+77383334 Msa1215920:CDS
TGGTGAGGCTTTGGAGAAGT+TGG 0.451946 8_1:+77378841 Msa1215920:CDS
TGCAAGTGGTAGACAGCGCC+TGG 0.452863 8_1:+77381975 Msa1215920:CDS
TTACCAAAGTCACGAGGATT+GGG 0.453100 8_1:+77383568 Msa1215920:CDS
AACACCAGCGGAAGCGGTAG+TGG 0.455366 8_1:+77377154 Msa1215920:CDS
TCTTCTGAGCAAGAAGTACT+TGG 0.456310 8_1:+77378641 Msa1215920:CDS
TGCAAACAAACCTGTACATC+AGG 0.459981 8_1:-77377597 None:intergenic
ATTCCCTGGAGGCGTCTTGA+AGG 0.463302 8_1:-77378874 None:intergenic
AATTCAGGGTTTCTTTCCAT+TGG 0.463398 8_1:+77378530 Msa1215920:CDS
AGATTCATCGTCCTTTAAGA+AGG 0.472400 8_1:+77378433 Msa1215920:CDS
GCAAAGATGGGATTTGTTGA+AGG 0.473979 8_1:+77383490 Msa1215920:CDS
TGGTAGACAGCGCCTGGAAA+AGG 0.475024 8_1:+77381981 Msa1215920:CDS
AGCAATTATTTGATTCTGCT+GGG 0.475436 8_1:-77378234 None:intergenic
ACCAAAAGTTCTTCAAGAGT+TGG 0.477228 8_1:+77383295 Msa1215920:CDS
ACTACCGCTTCCGCTGGTGT+TGG 0.478712 8_1:-77377152 None:intergenic
ATGGGAGGTGGAAGTAGAAG+AGG 0.479292 8_1:+77377112 Msa1215920:CDS
ATCCAAAGGCCGAAATCACT+TGG 0.483163 8_1:+77383202 Msa1215920:CDS
ACAAAAGGATCTTCAACTTC+AGG 0.485803 8_1:+77383418 Msa1215920:CDS
AAGGTGGATTCTTATCCGAT+TGG 0.487065 8_1:+77377230 Msa1215920:CDS
ACCTGAATTGCGATTGGAAG+AGG 0.489536 8_1:-77377260 None:intergenic
GATTATCTGGAAGGAGTTGG+TGG 0.493687 8_1:+77378734 Msa1215920:CDS
GGAGTAGCAGCCAAAGTTCT+GGG 0.494621 8_1:+77381814 Msa1215920:CDS
GATAGTTCTCATAGAGGACT+AGG 0.495640 8_1:+77378332 Msa1215920:CDS
GGATGACCTGATGCTCGAAA+AGG 0.498489 8_1:+77378961 Msa1215920:CDS
ATGGTCAGATTCAATGTAGC+AGG 0.505417 8_1:-77383822 None:intergenic
CAAGGTATTACTGCTCCATT+GGG 0.508666 8_1:+77383535 Msa1215920:CDS
TGGCAGGAGTTTATCAGTTG+CGG 0.511083 8_1:+77381793 Msa1215920:CDS
GAAATCACTTGGTTTGGGTG+TGG 0.511866 8_1:+77383213 Msa1215920:CDS
GTGGAATATACATACAGTTA+TGG 0.514442 8_1:+77378293 Msa1215920:CDS
AGAACCAACATTAGCAGAGC+TGG 0.514799 8_1:-77383068 None:intergenic
GCCAAAGTTCTGGGAAAAGA+AGG 0.519178 8_1:+77381823 Msa1215920:CDS
TTTCATCATGCCATATTCCC+TGG 0.521306 8_1:-77378888 None:intergenic
GTTTCCACTACCGCTTCCGC+TGG 0.522358 8_1:-77377158 None:intergenic
AGATCCAACACCAGCGGAAG+CGG 0.523098 8_1:+77377148 Msa1215920:CDS
TGTCTTCTAGTAGAAATTCA+GGG 0.524061 8_1:+77378516 Msa1215920:CDS
GCCACCAGCTCTGCTAATGT+TGG 0.526599 8_1:+77383064 Msa1215920:CDS
GTGGTTCAAATAACAAATCT+GGG 0.527403 8_1:+77377490 Msa1215920:CDS
ATATAGGTACAGCGGTTGGC+AGG 0.527805 8_1:+77381777 Msa1215920:intron
ATGATGTGATAGTGCCACTT+GGG 0.528105 8_1:-77378379 None:intergenic
TTGTTAAAACGGGCGTCCAT+TGG 0.529238 8_1:-77383893 None:intergenic
AGTTCTTCCAGCGGTAGCTA+TGG 0.533008 8_1:+77378821 Msa1215920:CDS
GGAAGAGGAAGGACCCCAAT+CGG 0.535272 8_1:-77377245 None:intergenic
AGCCTCACCATAGCTACCGC+TGG 0.539111 8_1:-77378828 None:intergenic
GAGAGAACCTGAATTGCGAT+TGG 0.541049 8_1:-77377266 None:intergenic
AACCCGAAAACCCGTAAAAG+AGG 0.541769 8_1:+77377178 Msa1215920:CDS
TGGGATTCCACCATAACAAA+AGG 0.542965 8_1:-77378215 None:intergenic
ACCCGTAAAAGAGGTTCAGT+TGG 0.543592 8_1:+77377187 Msa1215920:CDS
GGATAGAAACTGTGATCAGA+TGG 0.543707 8_1:+77378472 Msa1215920:CDS
TTGCTCTTCTGAGTATGTGA+AGG 0.547065 8_1:-77379040 None:intergenic
CGCTGTCTACCACTTGCAGA+TGG 0.551619 8_1:-77381970 None:intergenic
GTTGTTAGGAGTTGATGAAG+AGG 0.552040 8_1:+77382733 Msa1215920:intron
TTGGGAGATAGTTCTCATAG+AGG 0.553009 8_1:+77378326 Msa1215920:CDS
ACCAGGAAGTCTCGCGTGGT+GGG 0.556174 8_1:+77378147 Msa1215920:intron
TTCCCTGGAGGCGTCTTGAA+GGG 0.557047 8_1:-77378873 None:intergenic
TCAAAGATGATGGCAAAGAT+GGG 0.557589 8_1:+77383478 Msa1215920:CDS
TCACGAGGATTGGGCGCCAA+AGG 0.557803 8_1:+77383577 Msa1215920:CDS
GCTACATTGAATCTGACCAT+TGG 0.558739 8_1:+77383825 Msa1215920:three_prime_UTR
TCGTCCTTTAAGAAGGATGT+TGG 0.562484 8_1:+77378440 Msa1215920:CDS
GAAGATTATCTGGAAGGAGT+TGG 0.566201 8_1:+77378731 Msa1215920:CDS
GGGTTTCGTCATGTTCAGCA+TGG 0.567965 8_1:-77378358 None:intergenic
GGGGTTTGGATCAAAGATGA+TGG 0.569434 8_1:+77383468 Msa1215920:CDS
ACACTGTTCTGCTTTGAAGG+AGG 0.570191 8_1:-77378272 None:intergenic
TACATGTCTTCCATAAAAGT+AGG 0.570422 8_1:-77383783 None:intergenic
GATGATGTGATAGTGCCACT+TGG 0.570624 8_1:-77378380 None:intergenic
CTACGTAGAGGAGAAGCATC+CGG 0.570924 8_1:+77377516 Msa1215920:CDS
GAGGCTTTGGAGAAGTTGGG+TGG 0.575721 8_1:+77378845 Msa1215920:CDS
TGGGTTGCAGGTAGAAATGG+TGG 0.583116 8_1:+77377471 Msa1215920:intron
GAAGGATGTTGGTTCTGATG+AGG 0.583286 8_1:+77378451 Msa1215920:CDS
GGAAGAAGACTTGCCATCAA+AGG 0.583887 8_1:+77378493 Msa1215920:CDS
ATGGGATACACTGAAGGAGG+GGG 0.584549 8_1:+77383136 Msa1215920:CDS
GTATAACTTAAGACCACCAA+TGG 0.584629 8_1:-77378546 None:intergenic
CCAGTGTCATTTGTATCAAG+CGG 0.586966 8_1:+77382968 Msa1215920:CDS
AAAATGGGATACACTGAAGG+AGG 0.587249 8_1:+77383133 Msa1215920:CDS
TTCCAGCGGTAGCTATGGTG+AGG 0.589555 8_1:+77378826 Msa1215920:CDS
ACAATAATACACAATCAGAA+AGG 0.589988 8_1:-77383627 None:intergenic
CTGACCATTGGATGAACTCG+TGG 0.592087 8_1:+77383837 Msa1215920:three_prime_UTR
GGTGGATTCTTATCCGATTG+GGG 0.594381 8_1:+77377232 Msa1215920:CDS
GGTGGGATTGGGAACAACAA+TGG 0.595350 8_1:+77378164 Msa1215920:CDS
AGGACGATGAATCTAAAACT+GGG 0.596269 8_1:-77378424 None:intergenic
AATGGGATACACTGAAGGAG+GGG 0.599358 8_1:+77383135 Msa1215920:CDS
GTATGTGAAGGCCAAGAATG+AGG 0.601158 8_1:-77379028 None:intergenic
ATTGGGAACAACAATGGAGA+TGG 0.602466 8_1:+77378170 Msa1215920:CDS
ATCCCTTCAAGACGCCTCCA+GGG 0.603215 8_1:+77378871 Msa1215920:CDS
TCTTCTGAAAAGCGTACCAA+AGG 0.603247 8_1:+77383319 Msa1215920:CDS
TTAAGTGTTGTGATCTTACG+TGG 0.605767 8_1:+77383653 Msa1215920:three_prime_UTR
ATTCCACCATAACAAAAGGT+TGG 0.605848 8_1:-77378211 None:intergenic
GCATTCTCGAGATTGCTCAC+AGG 0.613292 8_1:+77380762 Msa1215920:CDS
GCTAAAATGGGATACACTGA+AGG 0.615184 8_1:+77383130 Msa1215920:CDS
GTAAAGTGAAGGACAATAGA+GGG 0.616316 8_1:+77382915 Msa1215920:CDS
GAGCAATCTCGAGAATGCAT+AGG 0.616893 8_1:-77380757 None:intergenic
TCAGATTTGTGACAGTGATG+CGG 0.618979 8_1:+77381929 Msa1215920:intron
ATGAATATAGGTACAGCGGT+TGG 0.619713 8_1:+77381773 Msa1215920:intron
GCATGATGAAAGCCCAACCA+TGG 0.621804 8_1:+77378900 Msa1215920:CDS
GATCCAGCAAGGGACAGTAT+CGG 0.623134 8_1:+77383256 Msa1215920:CDS
GTTGCAGAAGATTATCTGGA+AGG 0.624706 8_1:+77378725 Msa1215920:CDS
ACATCGATGCCATCTGCAAG+TGG 0.624959 8_1:+77381961 Msa1215920:CDS
AGGTATGGCTCAGCCCATTG+AGG 0.628083 8_1:+77383177 Msa1215920:CDS
GAAAAGACATCTGATGAGGA+CGG 0.634225 8_1:+77378611 Msa1215920:CDS
AAATGGGATACACTGAAGGA+GGG 0.635043 8_1:+77383134 Msa1215920:CDS
GGAAACAAAATAAGAAAACT+CGG 0.636334 8_1:+77383759 Msa1215920:three_prime_UTR
ACTGATAGTGCAGATAAGAA+GGG 0.636835 8_1:+77383040 Msa1215920:CDS
TAACTTGTACAGTTTCTGAG+TGG 0.637836 8_1:-77382997 None:intergenic
TGATTCAGACATTGATGATG+AGG 0.638404 8_1:+77378703 Msa1215920:CDS
CATCTGACTCGTCCACAACA+GGG 0.642232 8_1:-77378793 None:intergenic
GGACGATGAATCTAAAACTG+GGG 0.648232 8_1:-77378423 None:intergenic
CAGAGACAGACGTAAAGTGA+AGG 0.648868 8_1:+77382904 Msa1215920:CDS
CAATGTTGATGATCCAGCAA+GGG 0.649862 8_1:+77383246 Msa1215920:CDS
TGATGTGATAGTGCCACTTG+GGG 0.655301 8_1:-77378378 None:intergenic
GCAATGTTGATGATCCAGCA+AGG 0.655723 8_1:+77383245 Msa1215920:CDS
CTCCATGAATATAGGTACAG+CGG 0.656226 8_1:+77381769 Msa1215920:intron
TGATACTGAAGCTGTACCAA+TGG 0.656890 8_1:+77383877 Msa1215920:three_prime_UTR
AACTCCACGAGTTCATCCAA+TGG 0.657396 8_1:-77383841 None:intergenic
CCGCTTGATACAAATGACAC+TGG 0.657929 8_1:-77382968 None:intergenic
ACCAACATTAGCAGAGCTGG+TGG 0.659686 8_1:-77383065 None:intergenic
GGATCCTATGAACAAGAAGT+CGG 0.662351 8_1:+77382775 Msa1215920:CDS
AGCCCATTGAGGTTATCCAA+AGG 0.665722 8_1:+77383188 Msa1215920:CDS
CATTGAAAAGACATCTGATG+AGG 0.669248 8_1:+77378607 Msa1215920:CDS
AGAGGAAGATCCAACACCAG+CGG 0.671243 8_1:+77377142 Msa1215920:CDS
GAATTGCGATTGGAAGAGGA+AGG 0.674217 8_1:-77377256 None:intergenic
CATCATGCCATATTCCCTGG+AGG 0.682222 8_1:-77378885 None:intergenic
GATGATGATAGTTCTTCCAG+CGG 0.696571 8_1:+77378812 Msa1215920:CDS
TCCTTCAAAGCAGAACAGTG+TGG 0.701697 8_1:+77378274 Msa1215920:CDS
GAACATGACGAAACCCCAAG+TGG 0.708926 8_1:+77378365 Msa1215920:CDS
ATATACCAGGAAGTCTCGCG+TGG 0.708931 8_1:+77378143 Msa1215920:intron
TGATGAAAGCCCAACCATGG+AGG 0.712996 8_1:+77378903 Msa1215920:CDS
ATGGTTGCTAGACCCTGTTG+TGG 0.719295 8_1:+77378781 Msa1215920:CDS
AAATCTGGGAGTCTACGTAG+AGG 0.732384 8_1:+77377504 Msa1215920:CDS
GTTCGGTTACCAAAGTCACG+AGG 0.738978 8_1:+77383562 Msa1215920:CDS
GGATTAGGTAGAGAATCACA+AGG 0.757337 8_1:+77383517 Msa1215920:CDS
TGGTCTTAAGTTATACACAG+AGG 0.760535 8_1:+77378553 Msa1215920:CDS
AGAGAGAGAATGCAACACCG+AGG 0.788547 8_1:+77379715 Msa1215920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG - chr8_1:77381553-77381572 None:intergenic 0.0%
!!! AAAAATTGATAATTTATATC+TGG + chr8_1:77377368-77377387 Msa1215920:intron 10.0%
!!! AAAATTGATAATTTATATCT+GGG + chr8_1:77377369-77377388 Msa1215920:intron 10.0%
!!! TTTGAGTATTTATTTTATTT+GGG + chr8_1:77377452-77377471 Msa1215920:intron 10.0%
!!! AATTAAAAGCATATAATTAA+GGG - chr8_1:77379131-77379150 None:intergenic 10.0%
!!! AAATTAAAAGCATATAATTA+AGG - chr8_1:77379132-77379151 None:intergenic 10.0%
!! TAAAATACAAATAAATCAAT+GGG - chr8_1:77380124-77380143 None:intergenic 10.0%
!! ATAAAATACAAATAAATCAA+TGG - chr8_1:77380125-77380144 None:intergenic 10.0%
!! TTCAAAAAAATAATATATTG+TGG + chr8_1:77381152-77381171 Msa1215920:intron 10.0%
!! ATTAAATTTAGATTTCTAAT+TGG + chr8_1:77381357-77381376 Msa1215920:intron 10.0%
!!! AAAATAATTTTCAGTTTATT+TGG - chr8_1:77382562-77382581 None:intergenic 10.0%
!!! GTTTGAGTATTTATTTTATT+TGG + chr8_1:77377451-77377470 Msa1215920:intron 15.0%
!!! TATAACTTTAAGCATTTTTA+AGG + chr8_1:77377641-77377660 Msa1215920:intron 15.0%
!! TAATTAATGATATTAATGCA+AGG - chr8_1:77379250-77379269 None:intergenic 15.0%
!! AATCCAAAAAAATAAAGTTA+GGG - chr8_1:77380685-77380704 None:intergenic 15.0%
!!! ATATATCATTTTGTAATCAA+CGG - chr8_1:77380978-77380997 None:intergenic 15.0%
!!! TTGAAAATCAATTTTTGAAT+TGG - chr8_1:77381423-77381442 None:intergenic 15.0%
!! TTAAATAGATGAATATCATA+AGG - chr8_1:77381689-77381708 None:intergenic 15.0%
!!! TGATTGTAGTTTTTTAATTA+TGG + chr8_1:77383738-77383757 Msa1215920:three_prime_UTR 15.0%
!! TATAATTAAGGGAATAACAT+TGG - chr8_1:77379120-77379139 None:intergenic 20.0%
!!! TTTTAAATCCCTTGATTATT+TGG + chr8_1:77379279-77379298 Msa1215920:intron 20.0%
!!! CATGAAATATTAACTTGAAA+TGG + chr8_1:77379540-77379559 Msa1215920:intron 20.0%
!!! AGTGAATGAATTTTAGATAT+TGG + chr8_1:77379573-77379592 Msa1215920:intron 20.0%
!! TGATCTTGAGAAAATTAATT+CGG + chr8_1:77379741-77379760 Msa1215920:CDS 20.0%
!! AACACAGAAATAACTATATT+TGG - chr8_1:77379781-77379800 None:intergenic 20.0%
!! GGATTAAAAAGGAAATATAT+AGG - chr8_1:77380024-77380043 None:intergenic 20.0%
!! GAATCCAAAAAAATAAAGTT+AGG - chr8_1:77380686-77380705 None:intergenic 20.0%
!!! TTTTTTTGGATTCTAGAAAT+TGG + chr8_1:77380693-77380712 Msa1215920:intron 20.0%
!!! TTTGAAATAGCAATACTTTT+TGG - chr8_1:77380818-77380837 None:intergenic 20.0%
!! GATTACAAAATGATATATTG+CGG + chr8_1:77380980-77380999 Msa1215920:intron 20.0%
!!! TGAGTTTTACAAATAGAAAA+AGG - chr8_1:77381181-77381200 None:intergenic 20.0%
!! ACAATCAATTCTTTGAATAA+GGG - chr8_1:77381863-77381882 None:intergenic 20.0%
!! AACAATCAATTCTTTGAATA+AGG - chr8_1:77381864-77381883 None:intergenic 20.0%
!!! ATAAATGTTTTGAAGTTTCA+AGG - chr8_1:77382158-77382177 None:intergenic 20.0%
!!! TTTAGAGATTATTTCTTTAG+AGG - chr8_1:77382644-77382663 None:intergenic 20.0%
!! ATTACATCTAAATTAACCTT+TGG - chr8_1:77383596-77383615 None:intergenic 20.0%
!!! TTGTTTTTGTCTTTCAACAA+TGG - chr8_1:77377059-77377078 None:intergenic 25.0%
!! ATTTGTGTTTTTCTATGCTT+TGG + chr8_1:77377429-77377448 Msa1215920:intron 25.0%
!!! ATTTATTTTATTTGGGTTGC+AGG + chr8_1:77377459-77377478 Msa1215920:intron 25.0%
!! AATGGATTTGCAAAATCTTT+AGG + chr8_1:77377546-77377565 Msa1215920:CDS 25.0%
! ATGGATTTGCAAAATCTTTA+GGG + chr8_1:77377547-77377566 Msa1215920:CDS 25.0%
!!! TTAAGCATTTTTAAGGTTGT+AGG + chr8_1:77377648-77377667 Msa1215920:intron 25.0%
! TTTGCATCAACAAATTTAGA+TGG - chr8_1:77377688-77377707 None:intergenic 25.0%
! GTAACATTATATATGATCTG+TGG - chr8_1:77377730-77377749 None:intergenic 25.0%
!!! ATCCATCAACATAGTTTTAT+AGG + chr8_1:77378026-77378045 Msa1215920:intron 25.0%
! ATCCTATAAAACTATGTTGA+TGG - chr8_1:77378031-77378050 None:intergenic 25.0%
!!! AGTTATGGTGATTTTGTTTT+GGG + chr8_1:77378308-77378327 Msa1215920:CDS 25.0%
!!! TGCTTTAGAAGTTTAAAATG+TGG - chr8_1:77379188-77379207 None:intergenic 25.0%
!!! GCATTGATTTTTTCAGTTAA+AGG + chr8_1:77379205-77379224 Msa1215920:intron 25.0%
!! TTTTCAGTTAAAGGATGATA+TGG + chr8_1:77379214-77379233 Msa1215920:intron 25.0%
!! ATCAAGGGATTTAAAACTTT+GGG - chr8_1:77379275-77379294 None:intergenic 25.0%
!! AATCAAGGGATTTAAAACTT+TGG - chr8_1:77379276-77379295 None:intergenic 25.0%
!!! TATACATAGATTCAAGTTGA+TGG + chr8_1:77379481-77379500 Msa1215920:intron 25.0%
! TTGAGAAAATTAATTCGGTA+AGG + chr8_1:77379746-77379765 Msa1215920:intron 25.0%
!!! ATATAGTTATTTCTGTGTTC+TGG + chr8_1:77379782-77379801 Msa1215920:intron 25.0%
! GAAAGATAAATAGAGAGAAA+GGG - chr8_1:77379842-77379861 None:intergenic 25.0%
! TGAAAGATAAATAGAGAGAA+AGG - chr8_1:77379843-77379862 None:intergenic 25.0%
! TAACTTCTTGTATCAAAATG+TGG + chr8_1:77379911-77379930 Msa1215920:intron 25.0%
! CACACATAAATCAGAAAAAA+AGG - chr8_1:77379939-77379958 None:intergenic 25.0%
! AATATATAGGTAACAGGATT+AGG - chr8_1:77380011-77380030 None:intergenic 25.0%
! AAAGGAAATATATAGGTAAC+AGG - chr8_1:77380017-77380036 None:intergenic 25.0%
! GAACTTATATGGGATTAAAA+AGG - chr8_1:77380035-77380054 None:intergenic 25.0%
! TAACAAAATTCAGATTGATG+AGG - chr8_1:77380573-77380592 None:intergenic 25.0%
! GAAATACGTGATTCAATATA+AGG - chr8_1:77380603-77380622 None:intergenic 25.0%
! TATTGAATCACGTATTTCTT+TGG + chr8_1:77380605-77380624 Msa1215920:intron 25.0%
! CAAAAAAATAAAGTTAGGGT+GGG - chr8_1:77380681-77380700 None:intergenic 25.0%
!! GAAATTGGAAAAGATTGTTT+TGG + chr8_1:77380708-77380727 Msa1215920:intron 25.0%
! AACAATCAAATGCTAACATT+TGG - chr8_1:77381481-77381500 None:intergenic 25.0%
! TTAGCATTTGATTGTTATGT+TGG + chr8_1:77381485-77381504 Msa1215920:intron 25.0%
! ATTTAACTCCTTTAAACTCT+TGG + chr8_1:77381583-77381602 Msa1215920:intron 25.0%
! TTTAACTCCTTTAAACTCTT+GGG + chr8_1:77381584-77381603 Msa1215920:intron 25.0%
! TGCAAATTTAATATCTAGTC+TGG + chr8_1:77381896-77381915 Msa1215920:intron 25.0%
! TGATTGTTCAATTTAACCAT+TGG + chr8_1:77382188-77382207 Msa1215920:intron 25.0%
! GATTGTTCAATTTAACCATT+GGG + chr8_1:77382189-77382208 Msa1215920:intron 25.0%
!!! AGTTTTGAATAAATACCCAA+TGG - chr8_1:77382207-77382226 None:intergenic 25.0%
! TGATTGAAAATTTGTAAACC+CGG - chr8_1:77382259-77382278 None:intergenic 25.0%
! TTAAAAAGAATCACTTCATG+TGG + chr8_1:77382530-77382549 Msa1215920:intron 25.0%
! TGAGAAAGAAAAATGCTAAA+AGG + chr8_1:77382819-77382838 Msa1215920:CDS 25.0%
! TTCAAAAATGATGGCTAAAA+TGG + chr8_1:77383117-77383136 Msa1215920:CDS 25.0%
! TCAAAAATGATGGCTAAAAT+GGG + chr8_1:77383118-77383137 Msa1215920:CDS 25.0%
!!! TCTTTTGAAAAGCATACAAA+AGG + chr8_1:77383358-77383377 Msa1215920:CDS 25.0%
!!! TTCTTTTGAAAAGCATACAA+AGG + chr8_1:77383357-77383376 Msa1215920:CDS 25.0%
!!! TCTTTTGAAAAGCATACAAA+GGG + chr8_1:77383358-77383377 Msa1215920:CDS 25.0%
! ACAATAATACACAATCAGAA+AGG - chr8_1:77383630-77383649 None:intergenic 25.0%
!!! ATTTTTAGACAGTCTTTCTA+CGG - chr8_1:77383692-77383711 None:intergenic 25.0%
! ATCACTGTTAAAAGTTATCT+AGG + chr8_1:77383710-77383729 Msa1215920:three_prime_UTR 25.0%
! GGAAACAAAATAAGAAAACT+CGG + chr8_1:77383759-77383778 Msa1215920:three_prime_UTR 25.0%
! TTTTTGTCTTTCAACAATGG+CGG - chr8_1:77377056-77377075 None:intergenic 30.0%
ACGATTATTGGAAGCAAAAA+TGG + chr8_1:77377093-77377112 Msa1215920:exon 30.0%
CGATTATTGGAAGCAAAAAT+GGG + chr8_1:77377094-77377113 Msa1215920:exon 30.0%
GTGGTTCAAATAACAAATCT+GGG + chr8_1:77377490-77377509 Msa1215920:CDS 30.0%
!!! TGCAAATCCATTTTTAGAAC+CGG - chr8_1:77377538-77377557 None:intergenic 30.0%
! TTTAAGGTTGTAGGTGAAAA+TGG + chr8_1:77377657-77377676 Msa1215920:intron 30.0%
TAAAAGACGACACAAACTAT+CGG + chr8_1:77377778-77377797 Msa1215920:intron 30.0%
TCTGCTAAATATCTTCCTTT+AGG - chr8_1:77377974-77377993 None:intergenic 30.0%
! TCAGAGTAACTTGCATTTAT+CGG + chr8_1:77378119-77378138 Msa1215920:intron 30.0%
AGCAATTATTTGATTCTGCT+GGG - chr8_1:77378237-77378256 None:intergenic 30.0%
GTGGAATATACATACAGTTA+TGG + chr8_1:77378293-77378312 Msa1215920:CDS 30.0%
!! CAGTTATGGTGATTTTGTTT+TGG + chr8_1:77378307-77378326 Msa1215920:CDS 30.0%
TGTCTTCTAGTAGAAATTCA+GGG + chr8_1:77378516-77378535 Msa1215920:CDS 30.0%
TAACATTGGATCTTTGACAT+AGG - chr8_1:77379106-77379125 None:intergenic 30.0%
! TCAAGGGATTTAAAACTTTG+GGG - chr8_1:77379274-77379293 None:intergenic 30.0%
GCATTTATCTATTATCCTAG+TGG + chr8_1:77379370-77379389 Msa1215920:intron 30.0%
ACAATCTGACATAAGATTTG+TGG - chr8_1:77379418-77379437 None:intergenic 30.0%
AAGGGTAGACAAAAGAAAAT+GGG - chr8_1:77379824-77379843 None:intergenic 30.0%
AAAGGGTAGACAAAAGAAAA+TGG - chr8_1:77379825-77379844 None:intergenic 30.0%
!! AAGGTCTTGTTATTGTAGTA+AGG + chr8_1:77380068-77380087 Msa1215920:intron 30.0%
GATTTGGGTACATACATTTA+TGG + chr8_1:77380170-77380189 Msa1215920:intron 30.0%
ATTACATATACAGTCGTTGT+AGG + chr8_1:77380217-77380236 Msa1215920:intron 30.0%
ATAAGAAACTACCAACATTC+AGG + chr8_1:77380347-77380366 Msa1215920:intron 30.0%
TAAGAAACTACCAACATTCA+GGG + chr8_1:77380348-77380367 Msa1215920:intron 30.0%
GTTTAATAAACCCTGAATGT+TGG - chr8_1:77380361-77380380 None:intergenic 30.0%
!!! CTTCGTTGCATTTTTTAATC+TGG - chr8_1:77380413-77380432 None:intergenic 30.0%
CAGATTAAAAAATGCAACGA+AGG + chr8_1:77380411-77380430 Msa1215920:intron 30.0%
AAAAAGTAGAAGATGAGGAT+CGG - chr8_1:77380523-77380542 None:intergenic 30.0%
CCAAAAAAATAAAGTTAGGG+TGG - chr8_1:77380682-77380701 None:intergenic 30.0%
!!! CCACCCTAACTTTATTTTTT+TGG + chr8_1:77380679-77380698 Msa1215920:intron 30.0%
!!! ATTGGAAAAGATTGTTTTGG+AGG + chr8_1:77380711-77380730 Msa1215920:CDS 30.0%
!! ACTTTTTGGCCATACTATTT+GGG - chr8_1:77380804-77380823 None:intergenic 30.0%
!! TACTTTTTGGCCATACTATT+TGG - chr8_1:77380805-77380824 None:intergenic 30.0%
! GCTTCTGTTCTATTTTCTTA+AGG + chr8_1:77380870-77380889 Msa1215920:intron 30.0%
TGGTTCAAAATTATTATGCC+TGG - chr8_1:77381403-77381422 None:intergenic 30.0%
AAAAGGAGTTAAAAGATCCA+GGG - chr8_1:77381537-77381556 None:intergenic 30.0%
AAAAAGGAGTTAAAAGATCC+AGG - chr8_1:77381538-77381557 None:intergenic 30.0%
TAATCAATTAGGAATGCAGT+TGG - chr8_1:77381661-77381680 None:intergenic 30.0%
ACTGCATTCCTAATTGATTA+TGG + chr8_1:77381661-77381680 Msa1215920:intron 30.0%
CTGCATTCCTAATTGATTAT+GGG + chr8_1:77381662-77381681 Msa1215920:intron 30.0%
ATAAGGTCCCATAATCAATT+AGG - chr8_1:77381672-77381691 None:intergenic 30.0%
TAATATCTAGTCTGGATTTG+TGG + chr8_1:77381904-77381923 Msa1215920:intron 30.0%
! TTGAATTTATGCTTTTCCTC+CGG + chr8_1:77382060-77382079 Msa1215920:intron 30.0%
! TTTGAAGTTTCAAGGACATT+GGG - chr8_1:77382150-77382169 None:intergenic 30.0%
!!! TTTTGAAGTTTCAAGGACAT+TGG - chr8_1:77382151-77382170 None:intergenic 30.0%
!!! TGGTTTTGGTTCAAAAATGA+TGG + chr8_1:77383108-77383127 Msa1215920:CDS 30.0%
!! TCTTTTGAAAAGCACACAAA+AGG + chr8_1:77383403-77383422 Msa1215920:CDS 30.0%
!! CTTTTGAAAAGCATACAAAG+GGG + chr8_1:77383449-77383468 Msa1215920:CDS 30.0%
TACATGTCTTCCATAAAAGT+AGG - chr8_1:77383786-77383805 None:intergenic 30.0%
TTGCTTCCAATAATCGTGAA+TGG - chr8_1:77377090-77377109 None:intergenic 35.0%
TTATTGGAAGCAAAAATGGG+AGG + chr8_1:77377097-77377116 Msa1215920:exon 35.0%
! TACCAACTGAACCTCTTTTA+CGG - chr8_1:77377192-77377211 None:intergenic 35.0%
! GGCTAATGATTTTGCTTCAT+GGG + chr8_1:77377390-77377409 Msa1215920:intron 35.0%
GGTGGTTCAAATAACAAATC+TGG + chr8_1:77377489-77377508 Msa1215920:CDS 35.0%
TTATTCTTCACCTGATGTAC+AGG + chr8_1:77377587-77377606 Msa1215920:CDS 35.0%
CATGCACATACATATCCTAA+AGG + chr8_1:77377956-77377975 Msa1215920:intron 35.0%
TGCATTTATCGGTATATACC+AGG + chr8_1:77378130-77378149 Msa1215920:intron 35.0%
ATTCCACCATAACAAAAGGT+TGG - chr8_1:77378214-77378233 None:intergenic 35.0%
GAGCAATTATTTGATTCTGC+TGG - chr8_1:77378238-77378257 None:intergenic 35.0%
! AGGACGATGAATCTAAAACT+GGG - chr8_1:77378427-77378446 None:intergenic 35.0%
! AAGGACGATGAATCTAAAAC+TGG - chr8_1:77378428-77378447 None:intergenic 35.0%
! AGATTCATCGTCCTTTAAGA+AGG + chr8_1:77378433-77378452 Msa1215920:CDS 35.0%
AGAACCAACATCCTTCTTAA+AGG - chr8_1:77378447-77378466 None:intergenic 35.0%
GTGTCTTCTAGTAGAAATTC+AGG + chr8_1:77378515-77378534 Msa1215920:CDS 35.0%
AATTCAGGGTTTCTTTCCAT+TGG + chr8_1:77378530-77378549 Msa1215920:CDS 35.0%
GTATAACTTAAGACCACCAA+TGG - chr8_1:77378549-77378568 None:intergenic 35.0%
! TGGTCTTAAGTTATACACAG+AGG + chr8_1:77378553-77378572 Msa1215920:CDS 35.0%
CATTGAAAAGACATCTGATG+AGG + chr8_1:77378607-77378626 Msa1215920:CDS 35.0%
!! TGATTCAGACATTGATGATG+AGG + chr8_1:77378703-77378722 Msa1215920:CDS 35.0%
ACAACATCATCGATGCAAAA+TGG + chr8_1:77378762-77378781 Msa1215920:CDS 35.0%
! TTTCTAGCAGAAATGGTTCT+TGG - chr8_1:77378989-77379008 None:intergenic 35.0%
! ATGCTTCTTTCTAGCAGAAA+TGG - chr8_1:77378996-77379015 None:intergenic 35.0%
! CTAGAAAGAAGCATGTTTCT+CGG + chr8_1:77379002-77379021 Msa1215920:CDS 35.0%
AAAGCCTCCAAAAGAATTCA+TGG + chr8_1:77379061-77379080 Msa1215920:CDS 35.0%
! AGTCGTACCATGAATTCTTT+TGG - chr8_1:77379071-77379090 None:intergenic 35.0%
TATTAATGCAAGGATCTTCG+TGG - chr8_1:77379240-77379259 None:intergenic 35.0%
AAATCCCTTGATTATTTGGC+TGG + chr8_1:77379283-77379302 Msa1215920:intron 35.0%
CTATTATCCTAGTGGTTTGA+TGG + chr8_1:77379378-77379397 Msa1215920:intron 35.0%
ATATGTGTCAGCAAAATGAG+TGG - chr8_1:77379642-77379661 None:intergenic 35.0%
! TTTTCTCAAGATCAACACCT+CGG - chr8_1:77379735-77379754 None:intergenic 35.0%
TCGAGTCAGAGAACTTATAT+GGG - chr8_1:77380045-77380064 None:intergenic 35.0%
ATCGAGTCAGAGAACTTATA+TGG - chr8_1:77380046-77380065 None:intergenic 35.0%
GGAAGTTGTGTGATTAGATT+AGG + chr8_1:77380089-77380108 Msa1215920:intron 35.0%
TTTATATCTCTGATGACCCT+TGG + chr8_1:77380140-77380159 Msa1215920:intron 35.0%
TGCACAAAAAGTAGAAGATG+AGG - chr8_1:77380528-77380547 None:intergenic 35.0%
AGATTGATGAGGAGCAAAAA+TGG - chr8_1:77380562-77380581 None:intergenic 35.0%
TACACAAGGTAAACAGAAGT+CGG - chr8_1:77380847-77380866 None:intergenic 35.0%
TCTCAGTTCTCCATGAATAT+AGG + chr8_1:77381761-77381780 Msa1215920:intron 35.0%
! TGAATTTATGCTTTTCCTCC+GGG + chr8_1:77382061-77382080 Msa1215920:intron 35.0%
AGGAAAAATGAGTGGAAGAT+GGG - chr8_1:77382117-77382136 None:intergenic 35.0%
TAGGAAAAATGAGTGGAAGA+TGG - chr8_1:77382118-77382137 None:intergenic 35.0%
TTGAAGTTTCAAGGACATTG+GGG - chr8_1:77382149-77382168 None:intergenic 35.0%
!! AACTGCTATTTCAAAGACTC+CGG + chr8_1:77382237-77382256 Msa1215920:intron 35.0%
GAGAAAATACGTGTCAAAAG+AGG + chr8_1:77382493-77382512 Msa1215920:intron 35.0%
AAAATACGTGTCAAAAGAGG+AGG + chr8_1:77382496-77382515 Msa1215920:intron 35.0%
TTAGTTCAACCCGTAACAAA+CGG + chr8_1:77382686-77382705 Msa1215920:intron 35.0%
TTTCGTGAACTTCAGTTGTT+AGG + chr8_1:77382719-77382738 Msa1215920:intron 35.0%
!! GGAAGTTGATTTTTCTGTCA+TGG + chr8_1:77382754-77382773 Msa1215920:CDS 35.0%
AGACAGCAAGAACTTCAATT+TGG + chr8_1:77382851-77382870 Msa1215920:CDS 35.0%
GTAAAGTGAAGGACAATAGA+GGG + chr8_1:77382915-77382934 Msa1215920:CDS 35.0%
! TAACTTGTACAGTTTCTGAG+TGG - chr8_1:77383000-77383019 None:intergenic 35.0%
! ACTGATAGTGCAGATAAGAA+GGG + chr8_1:77383040-77383059 Msa1215920:CDS 35.0%
!!! TGCTAATGTTGGTTCTTTTG+AGG + chr8_1:77383075-77383094 Msa1215920:CDS 35.0%
ACCAAAAGTTCTTCAAGAGT+TGG + chr8_1:77383295-77383314 Msa1215920:CDS 35.0%
! ACCAACTCTTGAAGAACTTT+TGG - chr8_1:77383299-77383318 None:intergenic 35.0%
ACAAAAGGATCTTCAACTTC+AGG + chr8_1:77383373-77383392 Msa1215920:CDS 35.0%
ACAAAAGGATCTTCAACTTC+AGG + chr8_1:77383373-77383392 Msa1215920:CDS 35.0%
! ATCAAAGATGATGGCAAAGA+TGG + chr8_1:77383477-77383496 Msa1215920:CDS 35.0%
! TCAAAGATGATGGCAAAGAT+GGG + chr8_1:77383478-77383497 Msa1215920:CDS 35.0%
TTTGTTGAAGGTTCAGGATT+AGG + chr8_1:77383502-77383521 Msa1215920:CDS 35.0%
! TTAAGTGTTGTGATCTTACG+TGG + chr8_1:77383653-77383672 Msa1215920:three_prime_UTR 35.0%
!! AAAACTCGGTCCTACTTTTA+TGG + chr8_1:77383773-77383792 Msa1215920:three_prime_UTR 35.0%
! AACCTCTTTTACGGGTTTTC+GGG - chr8_1:77377183-77377202 None:intergenic 40.0%
! GAACCTCTTTTACGGGTTTT+CGG - chr8_1:77377184-77377203 None:intergenic 40.0%
! ACCAACTGAACCTCTTTTAC+GGG - chr8_1:77377191-77377210 None:intergenic 40.0%
! AAGGTGGATTCTTATCCGAT+TGG + chr8_1:77377230-77377249 Msa1215920:CDS 40.0%
! AGGTGGATTCTTATCCGATT+GGG + chr8_1:77377231-77377250 Msa1215920:CDS 40.0%
! GGGCTAATGATTTTGCTTCA+TGG + chr8_1:77377389-77377408 Msa1215920:intron 40.0%
!! ATTTGGGTTGCAGGTAGAAA+TGG + chr8_1:77377468-77377487 Msa1215920:intron 40.0%
!! GAAGCATCCGGTTCTAAAAA+TGG + chr8_1:77377528-77377547 Msa1215920:CDS 40.0%
TGCAAACAAACCTGTACATC+AGG - chr8_1:77377600-77377619 None:intergenic 40.0%
GTGTGTGCTTAAATGTTCGA+AGG - chr8_1:77377752-77377771 None:intergenic 40.0%
ATGTTGTGTCGTGTCTTTGT+CGG + chr8_1:77377821-77377840 Msa1215920:intron 40.0%
CTGAAAGATGCTTACTCACA+AGG + chr8_1:77377854-77377873 Msa1215920:intron 40.0%
ATTGGGAACAACAATGGAGA+TGG + chr8_1:77378170-77378189 Msa1215920:CDS 40.0%
TGGGATTCCACCATAACAAA+AGG - chr8_1:77378218-77378237 None:intergenic 40.0%
TTGGGAGATAGTTCTCATAG+AGG + chr8_1:77378326-77378345 Msa1215920:CDS 40.0%
GATAGTTCTCATAGAGGACT+AGG + chr8_1:77378332-77378351 Msa1215920:CDS 40.0%
!! ATGATGTGATAGTGCCACTT+GGG - chr8_1:77378382-77378401 None:intergenic 40.0%
! GGACGATGAATCTAAAACTG+GGG - chr8_1:77378426-77378445 None:intergenic 40.0%
! TCGTCCTTTAAGAAGGATGT+TGG + chr8_1:77378440-77378459 Msa1215920:CDS 40.0%
GGATAGAAACTGTGATCAGA+TGG + chr8_1:77378472-77378491 Msa1215920:CDS 40.0%
CTACTAGAAGACACCTTTGA+TGG - chr8_1:77378509-77378528 None:intergenic 40.0%
GAAAAGACATCTGATGAGGA+CGG + chr8_1:77378611-77378630 Msa1215920:CDS 40.0%
!! TCTTCTGAGCAAGAAGTACT+TGG + chr8_1:77378641-77378660 Msa1215920:CDS 40.0%
TGAGGTTGCAGAAGATTATC+TGG + chr8_1:77378721-77378740 Msa1215920:CDS 40.0%
GTTGCAGAAGATTATCTGGA+AGG + chr8_1:77378725-77378744 Msa1215920:CDS 40.0%
GAAGATTATCTGGAAGGAGT+TGG + chr8_1:77378731-77378750 Msa1215920:CDS 40.0%
GATGATGATAGTTCTTCCAG+CGG + chr8_1:77378812-77378831 Msa1215920:CDS 40.0%
TTTCATCATGCCATATTCCC+TGG - chr8_1:77378891-77378910 None:intergenic 40.0%
AAAGGAACGTGCTTCTTTAC+AGG - chr8_1:77378935-77378954 None:intergenic 40.0%
ATCAGGTCATCCAGAGTAAA+AGG - chr8_1:77378953-77378972 None:intergenic 40.0%
TTTCTCGGTTTCCTCATTCT+TGG + chr8_1:77379017-77379036 Msa1215920:CDS 40.0%
TTGCTCTTCTGAGTATGTGA+AGG - chr8_1:77379043-77379062 None:intergenic 40.0%
! CGTACCATGAATTCTTTTGG+AGG - chr8_1:77379068-77379087 None:intergenic 40.0%
CATTGGATCTTTGACATAGG+TGG - chr8_1:77379103-77379122 None:intergenic 40.0%
CCATCCAGCCAAATAATCAA+GGG - chr8_1:77379290-77379309 None:intergenic 40.0%
ACCATCCAGCCAAATAATCA+AGG - chr8_1:77379291-77379310 None:intergenic 40.0%
TGCTGACACATATTCTGTAC+AGG + chr8_1:77379649-77379668 Msa1215920:intron 40.0%
! AAGTTCTCTGACTCGATGAA+AGG + chr8_1:77380049-77380068 Msa1215920:intron 40.0%
TGGGTACATACATTTATGGC+AGG + chr8_1:77380174-77380193 Msa1215920:intron 40.0%
ACATATACAGTCGTTGTAGG+AGG + chr8_1:77380220-77380239 Msa1215920:intron 40.0%
! TTCCTTTTGATGCCTCTCAA+AGG - chr8_1:77380252-77380271 None:intergenic 40.0%
ACTCATTCTAATCATGGGAG+TGG - chr8_1:77380498-77380517 None:intergenic 40.0%
CGGACACTCATTCTAATCAT+GGG - chr8_1:77380503-77380522 None:intergenic 40.0%
TCGGACACTCATTCTAATCA+TGG - chr8_1:77380504-77380523 None:intergenic 40.0%
GTTACCATGCTTGACTCATT+TGG + chr8_1:77380649-77380668 Msa1215920:intron 40.0%
AACTCCAAATGAGTCAAGCA+TGG - chr8_1:77380656-77380675 None:intergenic 40.0%
! CCATACTATTTGGGACAGAA+AGG - chr8_1:77380795-77380814 None:intergenic 40.0%
CCTTTCTGTCCCAAATAGTA+TGG + chr8_1:77380792-77380811 Msa1215920:intron 40.0%
CTTCTGTTTACCTTGTGTAC+TGG + chr8_1:77380848-77380867 Msa1215920:intron 40.0%
!! TTAGTCTGGTGGTATTGACT+TGG + chr8_1:77381020-77381039 Msa1215920:intron 40.0%
!! GGATCTTAACCCATTGACTT+GGG + chr8_1:77381052-77381071 Msa1215920:intron 40.0%
! ATTCTCTCCGGTGCTAATTT+GGG + chr8_1:77381112-77381131 Msa1215920:intron 40.0%
! TTGGTATTTTCTTCCATGCC+AGG + chr8_1:77381504-77381523 Msa1215920:intron 40.0%
GATGCAACCCAAGAGTTTAA+AGG - chr8_1:77381594-77381613 None:intergenic 40.0%
TAGAACTGCACTGCTACAAT+GGG - chr8_1:77381628-77381647 None:intergenic 40.0%
TTAGAACTGCACTGCTACAA+TGG - chr8_1:77381629-77381648 None:intergenic 40.0%
GGAGAACTGAGATCATTACA+GGG - chr8_1:77381753-77381772 None:intergenic 40.0%
TGGAGAACTGAGATCATTAC+AGG - chr8_1:77381754-77381773 None:intergenic 40.0%
CTCCATGAATATAGGTACAG+CGG + chr8_1:77381769-77381788 Msa1215920:intron 40.0%
AACCGCTGTACCTATATTCA+TGG - chr8_1:77381774-77381793 None:intergenic 40.0%
ATGAATATAGGTACAGCGGT+TGG + chr8_1:77381773-77381792 Msa1215920:intron 40.0%
! ACCTTCTTTTCCCAGAACTT+TGG - chr8_1:77381827-77381846 None:intergenic 40.0%
TCAGATTTGTGACAGTGATG+CGG + chr8_1:77381929-77381948 Msa1215920:intron 40.0%
! CACAGAATAGAACCTTTTCC+AGG - chr8_1:77381996-77382015 None:intergenic 40.0%
CTGGAAAAGGTTCTATTCTG+TGG + chr8_1:77381994-77382013 Msa1215920:intron 40.0%
GGAAGAGTAGGAAAAATGAG+TGG - chr8_1:77382125-77382144 None:intergenic 40.0%
!! ACTGCTATTTCAAAGACTCC+GGG + chr8_1:77382238-77382257 Msa1215920:intron 40.0%
! TTTTTACAGCAGAGACTGAG+AGG + chr8_1:77382292-77382311 Msa1215920:intron 40.0%
! TAGTCAGAGTCCGTTTGTTA+CGG - chr8_1:77382699-77382718 None:intergenic 40.0%
!! GTTGTTAGGAGTTGATGAAG+AGG + chr8_1:77382733-77382752 Msa1215920:intron 40.0%
GGATCCTATGAACAAGAAGT+CGG + chr8_1:77382775-77382794 Msa1215920:CDS 40.0%
CGTAAAGTGAAGGACAATAG+AGG + chr8_1:77382914-77382933 Msa1215920:CDS 40.0%
!! CCAGTGTCATTTGTATCAAG+CGG + chr8_1:77382968-77382987 Msa1215920:CDS 40.0%
! GACTGATAGTGCAGATAAGA+AGG + chr8_1:77383039-77383058 Msa1215920:CDS 40.0%
!!! TCTTTTGAGGTACACACTAC+TGG + chr8_1:77383088-77383107 Msa1215920:CDS 40.0%
GCTAAAATGGGATACACTGA+AGG + chr8_1:77383130-77383149 Msa1215920:CDS 40.0%
AAAATGGGATACACTGAAGG+AGG + chr8_1:77383133-77383152 Msa1215920:CDS 40.0%
AAATGGGATACACTGAAGGA+GGG + chr8_1:77383134-77383153 Msa1215920:CDS 40.0%
ACACCCAAACCAAGTGATTT+CGG - chr8_1:77383214-77383233 None:intergenic 40.0%
!! CAATGTTGATGATCCAGCAA+GGG + chr8_1:77383246-77383265 Msa1215920:CDS 40.0%
! TCTTCTGAAAAGCGTACCAA+AGG + chr8_1:77383319-77383338 Msa1215920:CDS 40.0%
ACCAAAGGCTCTTCAAGTAT+TGG + chr8_1:77383334-77383353 Msa1215920:CDS 40.0%
ACCAATACTTGAAGAGCCTT+TGG - chr8_1:77383338-77383357 None:intergenic 40.0%
GGATCTTCAACTTCAGGTAT+TGG + chr8_1:77383379-77383398 Msa1215920:CDS 40.0%
GGATCTTCAACTTCAGGTAT+TGG + chr8_1:77383379-77383398 Msa1215920:CDS 40.0%
! GAAAAGCATACAAAGGGGTT+TGG + chr8_1:77383454-77383473 Msa1215920:CDS 40.0%
!! GCAAAGATGGGATTTGTTGA+AGG + chr8_1:77383490-77383509 Msa1215920:CDS 40.0%
!! ATGGGATTTGTTGAAGGTTC+AGG + chr8_1:77383496-77383515 Msa1215920:CDS 40.0%
GGATTAGGTAGAGAATCACA+AGG + chr8_1:77383517-77383536 Msa1215920:CDS 40.0%
! ACAAGGTATTACTGCTCCAT+TGG + chr8_1:77383534-77383553 Msa1215920:CDS 40.0%
! CAAGGTATTACTGCTCCATT+GGG + chr8_1:77383535-77383554 Msa1215920:CDS 40.0%
TTACCAAAGTCACGAGGATT+GGG + chr8_1:77383568-77383587 Msa1215920:CDS 40.0%
ATGGTCAGATTCAATGTAGC+AGG - chr8_1:77383825-77383844 None:intergenic 40.0%
GCTACATTGAATCTGACCAT+TGG + chr8_1:77383825-77383844 Msa1215920:three_prime_UTR 40.0%
TGATACTGAAGCTGTACCAA+TGG + chr8_1:77383877-77383896 Msa1215920:three_prime_UTR 40.0%
CTCGCTCCATTCACGATTAT+TGG + chr8_1:77377081-77377100 Msa1215920:five_prime_UTR 45.0%
TTGGAAGCAAAAATGGGAGG+TGG + chr8_1:77377100-77377119 Msa1215920:exon 45.0%
AGTAGAAGAGGAAGAGGTAG+AGG + chr8_1:77377124-77377143 Msa1215920:CDS 45.0%
AACCCGAAAACCCGTAAAAG+AGG + chr8_1:77377178-77377197 Msa1215920:CDS 45.0%
ACCCGTAAAAGAGGTTCAGT+TGG + chr8_1:77377187-77377206 Msa1215920:CDS 45.0%
!!! AGAGAAGCACTTTTCGTCGA+AGG + chr8_1:77377211-77377230 Msa1215920:CDS 45.0%
! GGTGGATTCTTATCCGATTG+GGG + chr8_1:77377232-77377251 Msa1215920:CDS 45.0%
GAATTGCGATTGGAAGAGGA+AGG - chr8_1:77377259-77377278 None:intergenic 45.0%
TCCTCTTCCAATCGCAATTC+AGG + chr8_1:77377259-77377278 Msa1215920:CDS 45.0%
ACCTGAATTGCGATTGGAAG+AGG - chr8_1:77377263-77377282 None:intergenic 45.0%
GAGAGAACCTGAATTGCGAT+TGG - chr8_1:77377269-77377288 None:intergenic 45.0%
AAATCTGGGAGTCTACGTAG+AGG + chr8_1:77377504-77377523 Msa1215920:CDS 45.0%
!! ACACTGTTCTGCTTTGAAGG+AGG - chr8_1:77378275-77378294 None:intergenic 45.0%
TCCTTCAAAGCAGAACAGTG+TGG + chr8_1:77378274-77378293 Msa1215920:CDS 45.0%
TCCACACTGTTCTGCTTTGA+AGG - chr8_1:77378278-77378297 None:intergenic 45.0%
!! TGATGTGATAGTGCCACTTG+GGG - chr8_1:77378381-77378400 None:intergenic 45.0%
! GATGATGTGATAGTGCCACT+TGG - chr8_1:77378383-77378402 None:intergenic 45.0%
!! GAAGGATGTTGGTTCTGATG+AGG + chr8_1:77378451-77378470 Msa1215920:CDS 45.0%
GGAAGAAGACTTGCCATCAA+AGG + chr8_1:77378493-77378512 Msa1215920:CDS 45.0%
TCAGGGTTTCTTTCCATTGG+TGG + chr8_1:77378533-77378552 Msa1215920:CDS 45.0%
GATTATCTGGAAGGAGTTGG+TGG + chr8_1:77378734-77378753 Msa1215920:CDS 45.0%
TTTACAGGTCTTTGCCTCCA+TGG - chr8_1:77378920-77378939 None:intergenic 45.0%
! GAAGCACGTTCCTTTTACTC+TGG + chr8_1:77378940-77378959 Msa1215920:CDS 45.0%
!! TTGGATCCTTTTCGAGCATC+AGG - chr8_1:77378970-77378989 None:intergenic 45.0%
GTATGTGAAGGCCAAGAATG+AGG - chr8_1:77379031-77379050 None:intergenic 45.0%
CCCTTGATTATTTGGCTGGA+TGG + chr8_1:77379287-77379306 Msa1215920:intron 45.0%
GCTGGATGGTTGAAATAGCA+GGG + chr8_1:77379301-77379320 Msa1215920:intron 45.0%
ATAGCAGGGCTGGAAAAAAC+TGG + chr8_1:77379315-77379334 Msa1215920:intron 45.0%
AGCTCATCCATCAAACCACT+AGG - chr8_1:77379388-77379407 None:intergenic 45.0%
GTGTCAGCAAAATGAGTGGT+TGG - chr8_1:77379638-77379657 None:intergenic 45.0%
! ACAAGCTTTTCGCGAACATC+TGG + chr8_1:77379976-77379995 Msa1215920:intron 45.0%
!! TGCCTTTGAGAGGCATCAAA+AGG + chr8_1:77380247-77380266 Msa1215920:intron 45.0%
GAGCAATCTCGAGAATGCAT+AGG - chr8_1:77380760-77380779 None:intergenic 45.0%
AGAACAGAAGCCAGTACACA+AGG - chr8_1:77380861-77380880 None:intergenic 45.0%
!! TAACCCATTGACTTGGGTCT+TGG + chr8_1:77381058-77381077 Msa1215920:intron 45.0%
!! AACCCATTGACTTGGGTCTT+GGG + chr8_1:77381059-77381078 Msa1215920:intron 45.0%
! GATTCTCTCCGGTGCTAATT+TGG + chr8_1:77381111-77381130 Msa1215920:intron 45.0%
GCCTGGTTGTGAAAGAAACA+GGG - chr8_1:77381386-77381405 None:intergenic 45.0%
TGCCTGGTTGTGAAAGAAAC+AGG - chr8_1:77381387-77381406 None:intergenic 45.0%
AAGATCCAGGGTTCAAATCC+TGG - chr8_1:77381525-77381544 None:intergenic 45.0%
AGAACTGCACTGCTACAATG+GGG - chr8_1:77381627-77381646 None:intergenic 45.0%
TGGCAGGAGTTTATCAGTTG+CGG + chr8_1:77381793-77381812 Msa1215920:CDS 45.0%
!! GCCAAAGTTCTGGGAAAAGA+AGG + chr8_1:77381823-77381842 Msa1215920:CDS 45.0%
AAGTTTCAAGGACATTGGGG+TGG - chr8_1:77382146-77382165 None:intergenic 45.0%
! AGTCAGAGTCCGTTTGTTAC+GGG - chr8_1:77382698-77382717 None:intergenic 45.0%
!! CTCACCGACTTCTTGTTCAT+AGG - chr8_1:77382782-77382801 None:intergenic 45.0%
!! AGTTCTTTGGTGTCTTGCTC+TGG - chr8_1:77382877-77382896 None:intergenic 45.0%
! TCTCTGCTGACTGAGTTCTT+TGG - chr8_1:77382890-77382909 None:intergenic 45.0%
CAGAGACAGACGTAAAGTGA+AGG + chr8_1:77382904-77382923 Msa1215920:CDS 45.0%
CCGCTTGATACAAATGACAC+TGG - chr8_1:77382971-77382990 None:intergenic 45.0%
AGAACCAACATTAGCAGAGC+TGG - chr8_1:77383071-77383090 None:intergenic 45.0%
!!! GAGGTACACACTACTGGTTT+TGG + chr8_1:77383094-77383113 Msa1215920:CDS 45.0%
AATGGGATACACTGAAGGAG+GGG + chr8_1:77383135-77383154 Msa1215920:CDS 45.0%
GGATTGGGGAAAAATGGTCA+AGG + chr8_1:77383157-77383176 Msa1215920:CDS 45.0%
GGGGAAAAATGGTCAAGGTA+TGG + chr8_1:77383162-77383181 Msa1215920:CDS 45.0%
AGCCCATTGAGGTTATCCAA+AGG + chr8_1:77383188-77383207 Msa1215920:CDS 45.0%
GGCCTTTGGATAACCTCAAT+GGG - chr8_1:77383193-77383212 None:intergenic 45.0%
ATCCAAAGGCCGAAATCACT+TGG + chr8_1:77383202-77383221 Msa1215920:CDS 45.0%
AACCAAGTGATTTCGGCCTT+TGG - chr8_1:77383207-77383226 None:intergenic 45.0%
AAGGCCGAAATCACTTGGTT+TGG + chr8_1:77383207-77383226 Msa1215920:CDS 45.0%
AGGCCGAAATCACTTGGTTT+GGG + chr8_1:77383208-77383227 Msa1215920:CDS 45.0%
!! GAAATCACTTGGTTTGGGTG+TGG + chr8_1:77383213-77383232 Msa1215920:CDS 45.0%
!! GCAATGTTGATGATCCAGCA+AGG + chr8_1:77383245-77383264 Msa1215920:CDS 45.0%
GGGGTTTGGATCAAAGATGA+TGG + chr8_1:77383468-77383487 Msa1215920:CDS 45.0%
GTTACCAAAGTCACGAGGAT+TGG + chr8_1:77383567-77383586 Msa1215920:CDS 45.0%
AACTCCACGAGTTCATCCAA+TGG - chr8_1:77383844-77383863 None:intergenic 45.0%
!!! ATTAAATAAAGTTTTTATAT+TGG + chr8_1:77381293-77381312 Msa1215920:intron 5.0%
!!! TTAAAAAAGTTATTTTTATT+AGG + chr8_1:77382582-77382601 Msa1215920:intron 5.0%
ATGGGAGGTGGAAGTAGAAG+AGG + chr8_1:77377112-77377131 Msa1215920:CDS 50.0%
GGTGGAAGTAGAAGAGGAAG+AGG + chr8_1:77377118-77377137 Msa1215920:CDS 50.0%
AGAGGAAGATCCAACACCAG+CGG + chr8_1:77377142-77377161 Msa1215920:CDS 50.0%
!! GAAGCACTTTTCGTCGAAGG+TGG + chr8_1:77377214-77377233 Msa1215920:CDS 50.0%
TGGGTTGCAGGTAGAAATGG+TGG + chr8_1:77377471-77377490 Msa1215920:intron 50.0%
!! CTACGTAGAGGAGAAGCATC+CGG + chr8_1:77377516-77377535 Msa1215920:CDS 50.0%
ATATACCAGGAAGTCTCGCG+TGG + chr8_1:77378143-77378162 Msa1215920:intron 50.0%
GGTGGGATTGGGAACAACAA+TGG + chr8_1:77378164-77378183 Msa1215920:CDS 50.0%
! GCTGCGCCAACCTTTTGTTA+TGG + chr8_1:77378205-77378224 Msa1215920:CDS 50.0%
!! GCGCCAACCTTTTGTTATGG+TGG + chr8_1:77378208-77378227 Msa1215920:CDS 50.0%
GGGTTTCGTCATGTTCAGCA+TGG - chr8_1:77378361-77378380 None:intergenic 50.0%
GAACATGACGAAACCCCAAG+TGG + chr8_1:77378365-77378384 Msa1215920:CDS 50.0%
ATGGTTGCTAGACCCTGTTG+TGG + chr8_1:77378781-77378800 Msa1215920:CDS 50.0%
! CATCTGACTCGTCCACAACA+GGG - chr8_1:77378796-77378815 None:intergenic 50.0%
! TCATCTGACTCGTCCACAAC+AGG - chr8_1:77378797-77378816 None:intergenic 50.0%
AGTTCTTCCAGCGGTAGCTA+TGG + chr8_1:77378821-77378840 Msa1215920:CDS 50.0%
!! TGGTGAGGCTTTGGAGAAGT+TGG + chr8_1:77378841-77378860 Msa1215920:CDS 50.0%
!! GGTGAGGCTTTGGAGAAGTT+GGG + chr8_1:77378842-77378861 Msa1215920:CDS 50.0%
CATCATGCCATATTCCCTGG+AGG - chr8_1:77378888-77378907 None:intergenic 50.0%
GCATGATGAAAGCCCAACCA+TGG + chr8_1:77378900-77378919 Msa1215920:CDS 50.0%
TGATGAAAGCCCAACCATGG+AGG + chr8_1:77378903-77378922 Msa1215920:CDS 50.0%
AGGTCTTTGCCTCCATGGTT+GGG - chr8_1:77378915-77378934 None:intergenic 50.0%
GGATGACCTGATGCTCGAAA+AGG + chr8_1:77378961-77378980 Msa1215920:CDS 50.0%
GGCTGGATGGTTGAAATAGC+AGG + chr8_1:77379300-77379319 Msa1215920:intron 50.0%
GATGGTTGAAATAGCAGGGC+TGG + chr8_1:77379305-77379324 Msa1215920:intron 50.0%
ACTGTGTGTGAGCATGAGCA+GGG - chr8_1:77379607-77379626 None:intergenic 50.0%
TACTGTGTGTGAGCATGAGC+AGG - chr8_1:77379608-77379627 None:intergenic 50.0%
GCTCATGCTCACACACAGTA+TGG + chr8_1:77379608-77379627 Msa1215920:intron 50.0%
AGAGAGAGAATGCAACACCG+AGG + chr8_1:77379715-77379734 Msa1215920:CDS 50.0%
TCTGATGACCCTTGGAGTGT+GGG + chr8_1:77380148-77380167 Msa1215920:intron 50.0%
ACCCTTGGAGTGTGGGATTT+GGG + chr8_1:77380155-77380174 Msa1215920:intron 50.0%
ACCCAAATCCCACACTCCAA+GGG - chr8_1:77380159-77380178 None:intergenic 50.0%
TACCCAAATCCCACACTCCA+AGG - chr8_1:77380160-77380179 None:intergenic 50.0%
! AGGAGGCATATGCCTTTGAG+AGG + chr8_1:77380237-77380256 Msa1215920:intron 50.0%
GCATTCTCGAGATTGCTCAC+AGG + chr8_1:77380762-77380781 Msa1215920:CDS 50.0%
ATTGCGGATACCAACCCACT+TGG + chr8_1:77380996-77381015 Msa1215920:intron 50.0%
TTGCGGATACCAACCCACTT+GGG + chr8_1:77380997-77381016 Msa1215920:intron 50.0%
ACCACCAGACTAACCCAAGT+GGG - chr8_1:77381013-77381032 None:intergenic 50.0%
TACCACCAGACTAACCCAAG+TGG - chr8_1:77381014-77381033 None:intergenic 50.0%
!! GTCTGGTGGTATTGACTTGG+TGG + chr8_1:77381023-77381042 Msa1215920:intron 50.0%
CTCCCAAGACCCAAGTCAAT+GGG - chr8_1:77381064-77381083 None:intergenic 50.0%
ACTCCCAAGACCCAAGTCAA+TGG - chr8_1:77381065-77381084 None:intergenic 50.0%
GAATCGAACCTGAGACCTTG+AGG - chr8_1:77381096-77381115 None:intergenic 50.0%
GTCTCAGGTTCGATTCTCTC+CGG + chr8_1:77381100-77381119 Msa1215920:intron 50.0%
! TCTCCGGTGCTAATTTGGGT+GGG + chr8_1:77381116-77381135 Msa1215920:intron 50.0%
TAGCCCACCCAAATTAGCAC+CGG - chr8_1:77381122-77381141 None:intergenic 50.0%
! GCCCTGTTTCTTTCACAACC+AGG + chr8_1:77381382-77381401 Msa1215920:intron 50.0%
ATATAGGTACAGCGGTTGGC+AGG + chr8_1:77381777-77381796 Msa1215920:intron 50.0%
GGAGTAGCAGCCAAAGTTCT+GGG + chr8_1:77381814-77381833 Msa1215920:CDS 50.0%
ACATCGATGCCATCTGCAAG+TGG + chr8_1:77381961-77381980 Msa1215920:CDS 50.0%
TCAAGGGCAGTGATGAAACC+CGG - chr8_1:77382082-77382101 None:intergenic 50.0%
ACTGCCCTTGAGATACAGAG+TGG + chr8_1:77382091-77382110 Msa1215920:intron 50.0%
TGGGCCACTCTGTATCTCAA+GGG - chr8_1:77382098-77382117 None:intergenic 50.0%
ATGGGCCACTCTGTATCTCA+AGG - chr8_1:77382099-77382118 None:intergenic 50.0%
ACCAACATTAGCAGAGCTGG+TGG - chr8_1:77383068-77383087 None:intergenic 50.0%
ATGGGATACACTGAAGGAGG+GGG + chr8_1:77383136-77383155 Msa1215920:CDS 50.0%
ATACACTGAAGGAGGGGGAT+TGG + chr8_1:77383141-77383160 Msa1215920:CDS 50.0%
TACACTGAAGGAGGGGGATT+GGG + chr8_1:77383142-77383161 Msa1215920:CDS 50.0%
CGGCCTTTGGATAACCTCAA+TGG - chr8_1:77383194-77383213 None:intergenic 50.0%
GATCCAGCAAGGGACAGTAT+CGG + chr8_1:77383256-77383275 Msa1215920:CDS 50.0%
GTTCGGTTACCAAAGTCACG+AGG + chr8_1:77383562-77383581 Msa1215920:CDS 50.0%
CTGACCATTGGATGAACTCG+TGG + chr8_1:77383837-77383856 Msa1215920:three_prime_UTR 50.0%
AGATCCAACACCAGCGGAAG+CGG + chr8_1:77377148-77377167 Msa1215920:CDS 55.0%
GGAAGAGGAAGGACCCCAAT+CGG - chr8_1:77377248-77377267 None:intergenic 55.0%
! AAGTCTCGCGTGGTGGGATT+GGG + chr8_1:77378153-77378172 Msa1215920:CDS 55.0%
TTCCAGCGGTAGCTATGGTG+AGG + chr8_1:77378826-77378845 Msa1215920:CDS 55.0%
CGGTAGCTATGGTGAGGCTT+TGG + chr8_1:77378832-77378851 Msa1215920:CDS 55.0%
!! GAGGCTTTGGAGAAGTTGGG+TGG + chr8_1:77378845-77378864 Msa1215920:CDS 55.0%
TATCCCTTCAAGACGCCTCC+AGG + chr8_1:77378870-77378889 Msa1215920:CDS 55.0%
ATCCCTTCAAGACGCCTCCA+GGG + chr8_1:77378871-77378890 Msa1215920:CDS 55.0%
!! TTCCCTGGAGGCGTCTTGAA+GGG - chr8_1:77378876-77378895 None:intergenic 55.0%
!! ATTCCCTGGAGGCGTCTTGA+AGG - chr8_1:77378877-77378896 None:intergenic 55.0%
CAAGACGCCTCCAGGGAATA+TGG + chr8_1:77378878-77378897 Msa1215920:CDS 55.0%
CAGGTCTTTGCCTCCATGGT+TGG - chr8_1:77378916-77378935 None:intergenic 55.0%
CTGTGTGTGAGCATGAGCAG+GGG - chr8_1:77379606-77379625 None:intergenic 55.0%
CTCTGATGACCCTTGGAGTG+TGG + chr8_1:77380147-77380166 Msa1215920:intron 55.0%
GACCCTTGGAGTGTGGGATT+TGG + chr8_1:77380154-77380173 Msa1215920:intron 55.0%
CCAGACTAACCCAAGTGGGT+TGG - chr8_1:77381009-77381028 None:intergenic 55.0%
!! CCAACCCACTTGGGTTAGTC+TGG + chr8_1:77381006-77381025 Msa1215920:intron 55.0%
!! ACCCACTTGGGTTAGTCTGG+TGG + chr8_1:77381009-77381028 Msa1215920:intron 55.0%
TCGAACCTGAGACCTTGAGG+AGG - chr8_1:77381093-77381112 None:intergenic 55.0%
! CTCTCCGGTGCTAATTTGGG+TGG + chr8_1:77381115-77381134 Msa1215920:intron 55.0%
CCAGGGTTCAAATCCTGGCA+TGG - chr8_1:77381520-77381539 None:intergenic 55.0%
CCATGCCAGGATTTGAACCC+TGG + chr8_1:77381517-77381536 Msa1215920:intron 55.0%
TGCACTGCTACAATGGGGTG+GGG - chr8_1:77381622-77381641 None:intergenic 55.0%
CTGCACTGCTACAATGGGGT+GGG - chr8_1:77381623-77381642 None:intergenic 55.0%
ACTGCACTGCTACAATGGGG+TGG - chr8_1:77381624-77381643 None:intergenic 55.0%
! CAACCTGTTCTGAGCAGCGT+TGG + chr8_1:77381727-77381746 Msa1215920:intron 55.0%
CGGAGTAGCAGCCAAAGTTC+TGG + chr8_1:77381813-77381832 Msa1215920:CDS 55.0%
CGCTGTCTACCACTTGCAGA+TGG - chr8_1:77381973-77381992 None:intergenic 55.0%
TGGTAGACAGCGCCTGGAAA+AGG + chr8_1:77381981-77382000 Msa1215920:CDS 55.0%
GGACATTGGGGTGGAAGAGT+AGG - chr8_1:77382137-77382156 None:intergenic 55.0%
GCCACCAGCTCTGCTAATGT+TGG + chr8_1:77383064-77383083 Msa1215920:CDS 55.0%
ACACTGAAGGAGGGGGATTG+GGG + chr8_1:77383143-77383162 Msa1215920:CDS 55.0%
GGAGGGGGATTGGGGAAAAA+TGG + chr8_1:77383151-77383170 Msa1215920:CDS 55.0%
AGGTATGGCTCAGCCCATTG+AGG + chr8_1:77383177-77383196 Msa1215920:CDS 55.0%
! GTACCGATACTGTCCCTTGC+TGG - chr8_1:77383262-77383281 None:intergenic 55.0%
ACTACCGCTTCCGCTGGTGT+TGG - chr8_1:77377155-77377174 None:intergenic 60.0%
AACACCAGCGGAAGCGGTAG+TGG + chr8_1:77377154-77377173 Msa1215920:CDS 60.0%
GTTTCCACTACCGCTTCCGC+TGG - chr8_1:77377161-77377180 None:intergenic 60.0%
TACCAGGAAGTCTCGCGTGG+TGG + chr8_1:77378146-77378165 Msa1215920:intron 60.0%
ACCAGGAAGTCTCGCGTGGT+GGG + chr8_1:77378147-77378166 Msa1215920:intron 60.0%
! GAAGTCTCGCGTGGTGGGAT+TGG + chr8_1:77378152-77378171 Msa1215920:CDS 60.0%
AGCCTCACCATAGCTACCGC+TGG - chr8_1:77378831-77378850 None:intergenic 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG + chr8_1:77381078-77381097 Msa1215920:intron 60.0%
GTGCTCCTCCTCAAGGTCTC+AGG + chr8_1:77381085-77381104 Msa1215920:intron 60.0%
TGCTACAATGGGGTGGGGGT+GGG - chr8_1:77381617-77381636 None:intergenic 60.0%
GCACTGCTACAATGGGGTGG+GGG - chr8_1:77381621-77381640 None:intergenic 60.0%
TGCAAGTGGTAGACAGCGCC+TGG + chr8_1:77381975-77381994 Msa1215920:CDS 60.0%
AGGGCAGTGATGAAACCCGG+AGG - chr8_1:77382079-77382098 None:intergenic 60.0%
! CTGCTCCATTGGGCGCTGTT+CGG + chr8_1:77383545-77383564 Msa1215920:CDS 60.0%
GGTAACCGAACAGCGCCCAA+TGG - chr8_1:77383553-77383572 None:intergenic 60.0%
GCGCCCAATCCTCGTGACTT+TGG - chr8_1:77383574-77383593 None:intergenic 60.0%
TCACGAGGATTGGGCGCCAA+AGG + chr8_1:77383577-77383596 Msa1215920:CDS 60.0%
TCCCACCACGCGAGACTTCC+TGG - chr8_1:77378151-77378170 None:intergenic 65.0%
GCTACAATGGGGTGGGGGTG+GGG - chr8_1:77381616-77381635 None:intergenic 65.0%
CTGCTACAATGGGGTGGGGG+TGG - chr8_1:77381618-77381637 None:intergenic 65.0%
GGGCCAACGCTGCTCAGAAC+AGG - chr8_1:77381733-77381752 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 77377052 77383904 77377052 ID=Msa1215920;Name=Msa1215920
chr8_1 mRNA 77377052 77383904 77377052 ID=Msa1215920-mRNA-1;Parent=Msa1215920;Name=Msa1215920-mRNA-1;_AED=0.03;_eAED=0.03;_QI=60|1|1|1|1|1|8|301|798
chr8_1 exon 77377052 77377280 77377052 ID=Msa1215920-mRNA-1:exon:26688;Parent=Msa1215920-mRNA-1
chr8_1 exon 77377481 77377608 77377481 ID=Msa1215920-mRNA-1:exon:26689;Parent=Msa1215920-mRNA-1
chr8_1 exon 77378152 77379082 77378152 ID=Msa1215920-mRNA-1:exon:26690;Parent=Msa1215920-mRNA-1
chr8_1 exon 77379671 77379762 77379671 ID=Msa1215920-mRNA-1:exon:26691;Parent=Msa1215920-mRNA-1
chr8_1 exon 77380709 77380783 77380709 ID=Msa1215920-mRNA-1:exon:26692;Parent=Msa1215920-mRNA-1
chr8_1 exon 77381783 77381844 77381783 ID=Msa1215920-mRNA-1:exon:26693;Parent=Msa1215920-mRNA-1
chr8_1 exon 77381933 77382002 77381933 ID=Msa1215920-mRNA-1:exon:26694;Parent=Msa1215920-mRNA-1
chr8_1 exon 77382734 77383904 77382734 ID=Msa1215920-mRNA-1:exon:26695;Parent=Msa1215920-mRNA-1
chr8_1 five_prime_UTR 77377052 77377111 77377052 ID=Msa1215920-mRNA-1:five_prime_utr;Parent=Msa1215920-mRNA-1
chr8_1 CDS 77377112 77377280 77377112 ID=Msa1215920-mRNA-1:cds;Parent=Msa1215920-mRNA-1
chr8_1 CDS 77377481 77377608 77377481 ID=Msa1215920-mRNA-1:cds;Parent=Msa1215920-mRNA-1
chr8_1 CDS 77378152 77379082 77378152 ID=Msa1215920-mRNA-1:cds;Parent=Msa1215920-mRNA-1
chr8_1 CDS 77379671 77379762 77379671 ID=Msa1215920-mRNA-1:cds;Parent=Msa1215920-mRNA-1
chr8_1 CDS 77380709 77380783 77380709 ID=Msa1215920-mRNA-1:cds;Parent=Msa1215920-mRNA-1
chr8_1 CDS 77381783 77381844 77381783 ID=Msa1215920-mRNA-1:cds;Parent=Msa1215920-mRNA-1
chr8_1 CDS 77381933 77382002 77381933 ID=Msa1215920-mRNA-1:cds;Parent=Msa1215920-mRNA-1
chr8_1 CDS 77382734 77383603 77382734 ID=Msa1215920-mRNA-1:cds;Parent=Msa1215920-mRNA-1
chr8_1 three_prime_UTR 77383604 77383904 77383604 ID=Msa1215920-mRNA-1:three_prime_utr;Parent=Msa1215920-mRNA-1
Gene Sequence

>Msa1215920

ATGGGAGGTGGAAGTAGAAGAGGAAGAGGTAGAGGAAGATCCAACACCAGCGGAAGCGGTAGTGGAAACCCGAAAACCCGTAAAAGAGGTTCAGTTGGTAGAGAAGCACTTTTCGTCGAAGGTGGATTCTTATCCGATTGGGGTCCTTCCTCTTCCAATCGCAATTCAGGTAGAAATGGTGGTTCAAATAACAAATCTGGGAGTCTACGTAGAGGAGAAGCATCCGGTTCTAAAAATGGATTTGCAAAATCTTTAGGGACTACTATTGCATTCAATTATTCTTCACCTGATGTACAGGAAGTCTCGCGTGGTGGGATTGGGAACAACAATGGAGATGGTAATTTAAATAAGCTGCGCCAACCTTTTGTTATGGTGGAATCCCAGCAGAATCAAATAATTGCTCATGAAGATCAAACACCTCCTTCAAAGCAGAACAGTGTGGAATATACATACAGTTATGGTGATTTTGTTTTGGGAGATAGTTCTCATAGAGGACTAGGTTTCCATGCTGAACATGACGAAACCCCAAGTGGCACTATCACATCATCAGAACAGATGCTACAATCAACCCCAGTTTTAGATTCATCGTCCTTTAAGAAGGATGTTGGTTCTGATGAGGATAGAAACTGTGATCAGATGGAAGAAGACTTGCCATCAAAGGTGTCTTCTAGTAGAAATTCAGGGTTTCTTTCCATTGGTGGTCTTAAGTTATACACAGAGGACATCTCAGATATTGAAAGTGAAGAAAATTACATTGAAAAGACATCTGATGAGGACGGCTCTGCGTCTTCTGAGCAAGAAGTACTTGGATCATCTGAAAGCGATTATTCTGAAGACACATCTGACAGTGATTCAGACATTGATGATGAGGTTGCAGAAGATTATCTGGAAGGAGTTGGTGGTAGTGACAACATCATCGATGCAAAATGGTTGCTAGACCCTGTTGTGGACGAGTCAGATGATGATAGTTCTTCCAGCGGTAGCTATGGTGAGGCTTTGGAGAAGTTGGGTGGTATATCCCTTCAAGACGCCTCCAGGGAATATGGCATGATGAAAGCCCAACCATGGAGGCAAAGACCTGTAAAGAAGCACGTTCCTTTTACTCTGGATGACCTGATGCTCGAAAAGGATCCAAGAACCATTTCTGCTAGAAAGAAGCATGTTTCTCGGTTTCCTCATTCTTGGCCTTCACATACTCAGAAGAGCAAAGCCTCCAAAAGAATTCATGGTGAAAAAAAGAAACTTCGTAAAGAAAGAATTGCTGTCAAGCGTAGAGAGAGAATGCAACACCGAGGTGTTGATCTTGAGAAAATTAATTCGAAATTGGAAAAGATTGTTTTGGAGGACGTAGACATGTACTCTTTTCAGCCTATGCATTCTCGAGATTGCTCACAGGTACAGCGGTTGGCAGGAGTTTATCAGTTGCGGAGTAGCAGCCAAAGTTCTGGGAAAAGAAGATTTGTGACAGTGATGCGGACACATTCTACATCGATGCCATCTGCAAGTGGTAGACAGCGCCTGGAAAAGTTGTTAGGAGTTGATGAAGAGGAAGTTGATTTTTCTGTCATGGATCCTATGAACAAGAAGTCGGTGAGTGAAGACAGAAGAAGACTGAGAAAGAAAAATGCTAAAAGGAATGATTTTAGACAGCAAGAACTTCAATTTGGCCAGAGCAAGACACCAAAGAACTCAGTCAGCAGAGACAGACGTAAAGTGAAGGACAATAGAGGGAGCGAACAAAAGAGTTCATATGCTAATCAGCCAGTGTCATTTGTATCAAGCGGCACAATCCACTCAGAAACTGTACAAGTTATTGCTGTTGATTCTGAAGAGACTGATAGTGCAGATAAGAAGGGTGCCACCAGCTCTGCTAATGTTGGTTCTTTTGAGGTACACACTACTGGTTTTGGTTCAAAAATGATGGCTAAAATGGGATACACTGAAGGAGGGGGATTGGGGAAAAATGGTCAAGGTATGGCTCAGCCCATTGAGGTTATCCAAAGGCCGAAATCACTTGGTTTGGGTGTGGAATTCTCTAGCAATGTTGATGATCCAGCAAGGGACAGTATCGGTACTTCTAAAAAGCATACCAAAAGTTCTTCAAGAGTTGGTTCTTCTGAAAAGCGTACCAAAGGCTCTTCAAGTATTGGTTCTTTTGAAAAGCATACAAAAGGATCTTCAACTTCAGGTATTGGTTCTTTTGAAAAGCACACAAAAGGATCTTCAACTTCAGGTATTGGTTCTTTTGAAAAGCATACAAAGGGGTTTGGATCAAAGATGATGGCAAAGATGGGATTTGTTGAAGGTTCAGGATTAGGTAGAGAATCACAAGGTATTACTGCTCCATTGGGCGCTGTTCGGTTACCAAAGTCACGAGGATTGGGCGCCAAAGGTTAA

Protein sequence

>Msa1215920

MGGGSRRGRGRGRSNTSGSGSGNPKTRKRGSVGREALFVEGGFLSDWGPSSSNRNSGRNGGSNNKSGSLRRGEASGSKNGFAKSLGTTIAFNYSSPDVQEVSRGGIGNNNGDGNLNKLRQPFVMVESQQNQIIAHEDQTPPSKQNSVEYTYSYGDFVLGDSSHRGLGFHAEHDETPSGTITSSEQMLQSTPVLDSSSFKKDVGSDEDRNCDQMEEDLPSKVSSSRNSGFLSIGGLKLYTEDISDIESEENYIEKTSDEDGSASSEQEVLGSSESDYSEDTSDSDSDIDDEVAEDYLEGVGGSDNIIDAKWLLDPVVDESDDDSSSSGSYGEALEKLGGISLQDASREYGMMKAQPWRQRPVKKHVPFTLDDLMLEKDPRTISARKKHVSRFPHSWPSHTQKSKASKRIHGEKKKLRKERIAVKRRERMQHRGVDLEKINSKLEKIVLEDVDMYSFQPMHSRDCSQVQRLAGVYQLRSSSQSSGKRRFVTVMRTHSTSMPSASGRQRLEKLLGVDEEEVDFSVMDPMNKKSVSEDRRRLRKKNAKRNDFRQQELQFGQSKTPKNSVSRDRRKVKDNRGSEQKSSYANQPVSFVSSGTIHSETVQVIAVDSEETDSADKKGATSSANVGSFEVHTTGFGSKMMAKMGYTEGGGLGKNGQGMAQPIEVIQRPKSLGLGVEFSSNVDDPARDSIGTSKKHTKSSSRVGSSEKRTKGSSSIGSFEKHTKGSSTSGIGSFEKHTKGSSTSGIGSFEKHTKGFGSKMMAKMGFVEGSGLGRESQGITAPLGAVRLPKSRGLGAKG*