Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0918150 | XP_013441931.1 | 93.305 | 478 | 8 | 1 | 1 | 478 | 1 | 454 | 0.0 | 912 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0918150 | sp|I3R584|GLNA2_HALMT | 30.736 | 462 | 277 | 9 | 20 | 473 | 13 | 439 | 6.66e-64 | 216 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0048950 | Msa0918150 | 0.800012 | 1.759335e-48 | -8.615850e-47 |
| Msa0643190 | Msa0918150 | 0.805253 | 1.459706e-49 | -8.615850e-47 |
| Msa0768670 | Msa0918150 | 0.801623 | 8.252636e-49 | -8.615850e-47 |
| Msa0768720 | Msa0918150 | 0.805715 | 1.167766e-49 | -8.615850e-47 |
| Msa0795210 | Msa0918150 | 0.802744 | 4.851404e-49 | -8.615850e-47 |
| Msa0814160 | Msa0918150 | 0.805042 | 1.615462e-49 | -8.615850e-47 |
| Msa0822410 | Msa0918150 | 0.808798 | 2.594451e-50 | -8.615850e-47 |
| Msa0150910 | Msa0918150 | 0.805516 | 1.285654e-49 | -8.615850e-47 |
| Msa0212550 | Msa0918150 | 0.800112 | 1.679097e-48 | -8.615850e-47 |
| Msa0484410 | Msa0918150 | 0.805918 | 1.058226e-49 | -8.615850e-47 |
| Msa0602050 | Msa0918150 | 0.809722 | 1.643857e-50 | -8.615850e-47 |
| Msa0869660 | Msa0918150 | 0.808441 | 3.092153e-50 | -8.615850e-47 |
| Msa0890240 | Msa0918150 | 0.826360 | 2.830666e-54 | -8.615850e-47 |
| Msa0913550 | Msa0918150 | 0.836800 | 7.566391e-57 | -8.615850e-47 |
| Msa0918150 | Msa0935440 | 0.805802 | 1.119793e-49 | -8.615850e-47 |
| Msa0918150 | Msa0951150 | 0.820697 | 5.981175e-53 | -8.615850e-47 |
| Msa0918150 | Msa0954980 | 0.859086 | 5.272755e-63 | -8.615850e-47 |
| Msa0918150 | Msa0972370 | 0.814695 | 1.351527e-51 | -8.615850e-47 |
| Msa0918150 | Msa0982560 | 0.804233 | 2.383678e-49 | -8.615850e-47 |
| Msa0918150 | Msa0987640 | 0.827103 | 1.882426e-54 | -8.615850e-47 |
| Msa0918150 | Msa0990490 | 0.927678 | 8.409582e-92 | -8.615850e-47 |
| Msa0918150 | Msa1021620 | 0.807332 | 5.323674e-50 | -8.615850e-47 |
| Msa0918150 | Msa1106680 | 0.800290 | 1.544758e-48 | -8.615850e-47 |
| Msa0918150 | Msa1269050 | 0.801664 | 8.093974e-49 | -8.615850e-47 |
| Msa0918150 | Msa1323030 | 0.814436 | 1.542479e-51 | -8.615850e-47 |
| Msa0918150 | Msa1368490 | 0.805930 | 1.052220e-49 | -8.615850e-47 |
| Msa0918150 | Msa1445900 | 0.816767 | 4.666978e-52 | -8.615850e-47 |
| Msa0918150 | Msa1459610 | 0.804127 | 2.507891e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0918150 | MtrunA17_Chr6g0471351 | 92.917 | 480 | 8 | 2 | 1 | 478 | 1 | 456 | 0.0 | 907 |
| Msa0918150 | MtrunA17_Chr1g0180151 | 83.333 | 462 | 53 | 1 | 17 | 478 | 218 | 655 | 0.0 | 807 |
| Msa0918150 | MtrunA17_Chr3g0091091 | 77.871 | 479 | 79 | 4 | 1 | 478 | 22 | 474 | 0.0 | 759 |
| Msa0918150 | MtrunA17_Chr1g0180001 | 76.360 | 478 | 84 | 4 | 1 | 478 | 1 | 449 | 0.0 | 733 |
| Msa0918150 | MtrunA17_Chr1g0180191 | 76.172 | 256 | 37 | 1 | 17 | 272 | 404 | 635 | 1.01e-135 | 405 |
| Msa0918150 | MtrunA17_Chr1g0180211 | 89.583 | 144 | 15 | 0 | 335 | 478 | 12 | 155 | 3.98e-90 | 271 |
| Msa0918150 | MtrunA17_Chr1g0179971 | 84.000 | 125 | 20 | 0 | 217 | 341 | 1 | 125 | 4.64e-72 | 225 |
| Msa0918150 | MtrunA17_Chr1g0179981 | 75.000 | 144 | 35 | 1 | 1 | 144 | 1 | 143 | 2.28e-69 | 218 |
| Msa0918150 | MtrunA17_Chr3g0091051 | 75.000 | 68 | 15 | 2 | 335 | 402 | 27 | 92 | 2.41e-29 | 110 |
| Msa0918150 | MtrunA17_Chr1g0180201 | 87.500 | 40 | 5 | 0 | 297 | 336 | 1 | 40 | 1.72e-16 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0918150 | AT3G53180.1 | 62.500 | 464 | 148 | 2 | 17 | 478 | 413 | 852 | 0.0 | 615 |
Find 100 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTCATCTTTGAGAATTT+TGG | 0.124972 | 6_2:-45082501 | None:intergenic |
| TACCTTTCGAATCGCCTTTA+TGG | 0.152682 | 6_2:-45086466 | None:intergenic |
| AAAGATTCTGAAAGTGATTT+TGG | 0.159408 | 6_2:-45086384 | None:intergenic |
| AACTTTGGGGAAAGAGTTTA+TGG | 0.177851 | 6_2:+45085716 | Msa0918150:CDS |
| TTTCATTTGTTCGTATATTA+TGG | 0.185780 | 6_2:+45081981 | Msa0918150:CDS |
| TCTCCAGCTGGTTCTGGTTT+AGG | 0.213117 | 6_2:+45082220 | Msa0918150:CDS |
| AAAATCACTTTCAGAATCTT+TGG | 0.244497 | 6_2:+45086386 | Msa0918150:CDS |
| CACCTGATTTATCTACTAAA+AGG | 0.251150 | 6_2:+45082266 | Msa0918150:CDS |
| GATGGATCTCCAGCTGGTTC+TGG | 0.267311 | 6_2:+45082214 | Msa0918150:CDS |
| AGGTCAATTTGAGCTGGTTT+TGG | 0.272216 | 6_2:+45084442 | Msa0918150:CDS |
| GAATGGCCGAAATGTATTTA+TGG | 0.277709 | 6_2:+45085662 | Msa0918150:CDS |
| ACATCATAGAAACGCTTTCT+AGG | 0.280632 | 6_2:-45082133 | None:intergenic |
| ATATTATGGGTTGATAATTC+AGG | 0.296465 | 6_2:+45081995 | Msa0918150:CDS |
| TACTTCTGCTTTACATTCAA+TGG | 0.297886 | 6_2:+45083918 | Msa0918150:CDS |
| GACTTTCTAGAGGAGTTTAT+TGG | 0.301629 | 6_2:+45086426 | Msa0918150:CDS |
| TTTACACACGTGAAACTGTT+AGG | 0.307448 | 6_2:+45084501 | Msa0918150:CDS |
| TTGTAGCACCACTTCCTATC+AGG | 0.316453 | 6_2:+45085775 | Msa0918150:CDS |
| TTTGAGTTTAAATCATTTGA+TGG | 0.321281 | 6_2:+45086060 | Msa0918150:CDS |
| ATAGCAGATAAGCCTAAGTA+TGG | 0.330191 | 6_2:-45086093 | None:intergenic |
| AAGGTACACATTAGATGATC+TGG | 0.339749 | 6_2:+45085605 | Msa0918150:intron |
| AAGTAACTTCACGAAGTATT+GGG | 0.344458 | 6_2:-45083900 | None:intergenic |
| ATAATTGCTGCTGGCATTGA+TGG | 0.344774 | 6_2:+45086114 | Msa0918150:CDS |
| TCTGATGAATCATCAAAGTA+TGG | 0.348059 | 6_2:+45085687 | Msa0918150:CDS |
| AAGTATGGAATATCAACTTT+GGG | 0.349113 | 6_2:+45085702 | Msa0918150:CDS |
| AAATGAAACATCAGTGTCTA+AGG | 0.359967 | 6_2:-45081966 | None:intergenic |
| ATTATCTTACCAACAGGTTC+AGG | 0.370199 | 6_2:-45086159 | None:intergenic |
| TGGTTTAGCATTTGTGAGTA+TGG | 0.370758 | 6_2:+45082174 | Msa0918150:CDS |
| TTCTCTTGAAGAGCGCAATA+AGG | 0.373996 | 6_2:+45083726 | Msa0918150:CDS |
| GGAGTGGTGCATACATGTTC+TGG | 0.374699 | 6_2:+45085965 | Msa0918150:CDS |
| TTCATTTGTTCGTATATTAT+GGG | 0.380054 | 6_2:+45081982 | Msa0918150:CDS |
| TATGATGTTGTTACTAAGAA+TGG | 0.399525 | 6_2:+45082148 | Msa0918150:CDS |
| AAAGTATGGAATATCAACTT+TGG | 0.401630 | 6_2:+45085701 | Msa0918150:CDS |
| ACTCTTCTTAAGGCGTCTCT+TGG | 0.413453 | 6_2:-45082476 | None:intergenic |
| CAGATGCCATAAATACATTT+CGG | 0.416064 | 6_2:-45085668 | None:intergenic |
| GTTGCATTACCGGCGGACTT+AGG | 0.422977 | 6_2:+45082962 | Msa0918150:CDS |
| ACATTAGATGATCTGGGTTC+TGG | 0.424644 | 6_2:+45085612 | Msa0918150:CDS |
| AATGGGAATTCCAGTAGAAC+AGG | 0.438731 | 6_2:+45083936 | Msa0918150:CDS |
| ATCTTTGGAAGCTCTTCATA+AGG | 0.440929 | 6_2:+45086401 | Msa0918150:CDS |
| ACTTCTGCTTTACATTCAAT+GGG | 0.441181 | 6_2:+45083919 | Msa0918150:CDS |
| GAAGTAACTTCACGAAGTAT+TGG | 0.442468 | 6_2:-45083901 | None:intergenic |
| ATCTACAACCTGGTCAAGCT+TGG | 0.445135 | 6_2:+45082444 | Msa0918150:CDS |
| TGTTCTGGGGAAATGAGAAT+AGG | 0.460898 | 6_2:+45085980 | Msa0918150:CDS |
| GTTCTGGGGAAATGAGAATA+GGG | 0.462403 | 6_2:+45085981 | Msa0918150:CDS |
| CAAGTTGCTGACTGCCATAA+AGG | 0.462856 | 6_2:+45086452 | Msa0918150:CDS |
| CTACTAAAAGGACAATTCCT+TGG | 0.465569 | 6_2:+45082278 | Msa0918150:CDS |
| GCTACAAAAGACAAAATAGA+AGG | 0.467923 | 6_2:-45085759 | None:intergenic |
| GGTTCTGGTTTAGGTTCAGT+TGG | 0.474402 | 6_2:+45082229 | Msa0918150:CDS |
| CTCTTCTTAAGGCGTCTCTT+GGG | 0.477664 | 6_2:-45082475 | None:intergenic |
| TTGGGGAAAGAGTTTATGGC+TGG | 0.480319 | 6_2:+45085720 | Msa0918150:CDS |
| GCAAAACCATCAGGAGTTCC+AGG | 0.481545 | 6_2:-45086030 | None:intergenic |
| TCTACAACCTGGTCAAGCTT+GGG | 0.485560 | 6_2:+45082445 | Msa0918150:CDS |
| TTGCAGTTACATGCAGAAGC+TGG | 0.487892 | 6_2:+45084416 | Msa0918150:intron |
| TCTCCTCCTGGAACTCCTGA+TGG | 0.488319 | 6_2:+45086024 | Msa0918150:CDS |
| TTGCGAGCTTCATCTCCTCC+TGG | 0.498368 | 6_2:+45086012 | Msa0918150:CDS |
| AAATTACTCGCAAAACCATC+AGG | 0.503241 | 6_2:-45086039 | None:intergenic |
| TACATTAAGCAGCTCAATAA+CGG | 0.504013 | 6_2:-45086796 | None:intergenic |
| TGGAAAAGGTCAATTTGAGC+TGG | 0.509856 | 6_2:+45084436 | Msa0918150:CDS |
| ATGCTGACGAGGAGCAGTAA+GGG | 0.511270 | 6_2:-45083864 | None:intergenic |
| AATGCTGACGAGGAGCAGTA+AGG | 0.514992 | 6_2:-45083865 | None:intergenic |
| ACAGGGAAGGGAAAGAAGAA+TGG | 0.516213 | 6_2:+45083824 | Msa0918150:intron |
| CAATATTCCCAAGCTTGACC+AGG | 0.521090 | 6_2:-45082452 | None:intergenic |
| TTACACACGTGAAACTGTTA+GGG | 0.524372 | 6_2:+45084502 | Msa0918150:CDS |
| GAGTGGTGCATACATGTTCT+GGG | 0.528128 | 6_2:+45085966 | Msa0918150:CDS |
| CTTTCACTTCCTGAACCTGT+TGG | 0.529336 | 6_2:+45086150 | Msa0918150:CDS |
| GTTGTTACTAAGAATGGTGT+TGG | 0.529371 | 6_2:+45082154 | Msa0918150:CDS |
| TTATCTGCTATAATTGCTGC+TGG | 0.535019 | 6_2:+45086105 | Msa0918150:CDS |
| GACTTCCAGGTACTGAATGC+AGG | 0.536088 | 6_2:+45083686 | Msa0918150:intron |
| CATCTAAGCTTGTGGCAGAA+TGG | 0.537152 | 6_2:+45085645 | Msa0918150:CDS |
| TTACATGCAGAAGCTGGAAA+AGG | 0.542608 | 6_2:+45084422 | Msa0918150:CDS |
| ATAGATAGCAGAAACCTGAT+AGG | 0.545554 | 6_2:-45085789 | None:intergenic |
| TATGCACCACTCCATGTGTT+CGG | 0.546842 | 6_2:-45085955 | None:intergenic |
| GAACCTAAACCAGAACCAGC+TGG | 0.546983 | 6_2:-45082223 | None:intergenic |
| TCTCAAAGATGAATTTGACT+TGG | 0.550516 | 6_2:+45082508 | Msa0918150:CDS |
| ATCGATTGCAGCCGAACACA+TGG | 0.554491 | 6_2:+45085944 | Msa0918150:CDS |
| AGCAGAAACCTGATAGGAAG+TGG | 0.556077 | 6_2:-45085783 | None:intergenic |
| AGGTACACATTAGATGATCT+GGG | 0.560991 | 6_2:+45085606 | Msa0918150:intron |
| GATTGAGTTGAGTAAAGCAG+TGG | 0.575460 | 6_2:+45081922 | Msa0918150:CDS |
| GTGGGCAAAGGCCGCTACAA+AGG | 0.577587 | 6_2:+45082922 | Msa0918150:intron |
| GGTTCTGCAAACCCATACTT+AGG | 0.580085 | 6_2:+45086081 | Msa0918150:CDS |
| AGGGCAATTGCTAGAAAACA+TGG | 0.595938 | 6_2:+45084521 | Msa0918150:CDS |
| TCATAAGGCTGACTTTCTAG+AGG | 0.604644 | 6_2:+45086416 | Msa0918150:CDS |
| TTGCAGCGACCTAAGTCCGC+CGG | 0.606316 | 6_2:-45082971 | None:intergenic |
| TAGCAGATAAGCCTAAGTAT+GGG | 0.608694 | 6_2:-45086092 | None:intergenic |
| AGTAACTTCACGAAGTATTG+GGG | 0.615657 | 6_2:-45083899 | None:intergenic |
| GCCATGTTCATCTAAGCTTG+TGG | 0.618097 | 6_2:+45085637 | Msa0918150:CDS |
| GGAGGAGATGAAGCTCGCAA+TGG | 0.620695 | 6_2:-45086009 | None:intergenic |
| TGCCATAAAGGCGATTCGAA+AGG | 0.620766 | 6_2:+45086464 | Msa0918150:CDS |
| AGCAACATCAAATGCTGACG+AGG | 0.632071 | 6_2:-45083875 | None:intergenic |
| TGATCATTACTCGAAGAACA+AGG | 0.636530 | 6_2:+45086751 | Msa0918150:CDS |
| TGCTGACGAGGAGCAGTAAG+GGG | 0.638683 | 6_2:-45083863 | None:intergenic |
| AGTGGAAGATGTTGAACTTG+TGG | 0.645822 | 6_2:+45081940 | Msa0918150:CDS |
| CTGGCATTGATGGTTTACGT+AGG | 0.652558 | 6_2:+45086124 | Msa0918150:CDS |
| GCCACAAGCTTAGATGAACA+TGG | 0.656206 | 6_2:-45085638 | None:intergenic |
| TGTTGTTGTTGCATTACCGG+CGG | 0.657889 | 6_2:+45082955 | Msa0918150:CDS |
| TTGCAGCCGAACACATGGAG+TGG | 0.664649 | 6_2:+45085949 | Msa0918150:CDS |
| GGTGATCTGAATCTACAACC+TGG | 0.678554 | 6_2:+45082434 | Msa0918150:CDS |
| AGTATGGAATATCAACTTTG+GGG | 0.682104 | 6_2:+45085703 | Msa0918150:CDS |
| CTGGGGAAATGAGAATAGGG+AGG | 0.701363 | 6_2:+45085984 | Msa0918150:CDS |
| AAACCATCAGGAGTTCCAGG+AGG | 0.759604 | 6_2:-45086027 | None:intergenic |
| AGTGGTGCATACATGTTCTG+GGG | 0.763007 | 6_2:+45085967 | Msa0918150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATCCTTTTTAAAAA+TGG | + | chr6_2:45083020-45083039 | Msa0918150:intron | 10.0% |
| !!! | AAAAAATCCTTTTTAAAAAT+GGG | + | chr6_2:45083021-45083040 | Msa0918150:intron | 10.0% |
| !!! | TTTATTCTAAAGATTTAAAA+TGG | - | chr6_2:45084249-45084268 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATTCAGAAAAT+GGG | - | chr6_2:45084351-45084370 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAATTCAGAAAA+TGG | - | chr6_2:45084352-45084371 | None:intergenic | 10.0% |
| !!! | ATTTTCATTTCAATTTTTTT+TGG | + | chr6_2:45084786-45084805 | Msa0918150:intron | 10.0% |
| !! | ATATTTATATACTTTGAATT+TGG | - | chr6_2:45084863-45084882 | None:intergenic | 10.0% |
| !!! | GCAAATTTTTAAAATTTTAA+TGG | + | chr6_2:45084922-45084941 | Msa0918150:intron | 10.0% |
| !! | AACTATAAAGTGATAAATAA+GGG | - | chr6_2:45082044-45082063 | None:intergenic | 15.0% |
| !! | AAACTATAAAGTGATAAATA+AGG | - | chr6_2:45082045-45082064 | None:intergenic | 15.0% |
| !! | TGTAATTAATCAAAATTTCT+AGG | - | chr6_2:45082762-45082781 | None:intergenic | 15.0% |
| !!! | AAAAATCCTTTTTAAAAATG+GGG | + | chr6_2:45083022-45083041 | Msa0918150:intron | 15.0% |
| !! | AATATACACAAAAATTAGAT+TGG | + | chr6_2:45083264-45083283 | Msa0918150:intron | 15.0% |
| !! | TTATATAGAGAGAAAAATAA+CGG | + | chr6_2:45083549-45083568 | Msa0918150:intron | 15.0% |
| !!! | TATATATTTTATACTTGCAA+TGG | - | chr6_2:45084594-45084613 | None:intergenic | 15.0% |
| !!! | TGAAAAAGTTTTTAAATATG+TGG | + | chr6_2:45084630-45084649 | Msa0918150:intron | 15.0% |
| !!! | TTGTGAATTTTGAAAAATAT+AGG | + | chr6_2:45084952-45084971 | Msa0918150:intron | 15.0% |
| !!! | TGTGAATTTTGAAAAATATA+GGG | + | chr6_2:45084953-45084972 | Msa0918150:intron | 15.0% |
| !!! | TGATGTAATGTAATTTTATA+GGG | - | chr6_2:45085187-45085206 | None:intergenic | 15.0% |
| !!! | TTGATGTAATGTAATTTTAT+AGG | - | chr6_2:45085188-45085207 | None:intergenic | 15.0% |
| !!! | TTTAATAATTTCAAGTGTTT+TGG | + | chr6_2:45085262-45085281 | Msa0918150:intron | 15.0% |
| !! | AAAAAACAAGCATATAATTT+AGG | - | chr6_2:45085828-45085847 | None:intergenic | 15.0% |
| !!! | AATATTTTTTACAAAAGCAT+AGG | - | chr6_2:45086291-45086310 | None:intergenic | 15.0% |
| !! | GTTTCATTAAAAGATAATAA+GGG | - | chr6_2:45086668-45086687 | None:intergenic | 15.0% |
| !! | AGTTTCATTAAAAGATAATA+AGG | - | chr6_2:45086669-45086688 | None:intergenic | 15.0% |
| !! | TTTCATTTGTTCGTATATTA+TGG | + | chr6_2:45081981-45082000 | Msa0918150:CDS | 20.0% |
| !! | TTCATTTGTTCGTATATTAT+GGG | + | chr6_2:45081982-45082001 | Msa0918150:CDS | 20.0% |
| !!! | CTATATTAGTATATGTTTTG+AGG | + | chr6_2:45082083-45082102 | Msa0918150:intron | 20.0% |
| !! | TCAGAATTAAAAGTAATTGA+AGG | - | chr6_2:45082314-45082333 | None:intergenic | 20.0% |
| !!! | AAATTCATCTTTGAGAATTT+TGG | - | chr6_2:45082504-45082523 | None:intergenic | 20.0% |
| !! | CAATTGTTAATTACTTTCAA+AGG | + | chr6_2:45082629-45082648 | Msa0918150:intron | 20.0% |
| !! | AAGGTTAATAGATATACTAT+AGG | + | chr6_2:45082648-45082667 | Msa0918150:intron | 20.0% |
| !!! | AACTTTATTTCCTTCTAATT+TGG | + | chr6_2:45082697-45082716 | Msa0918150:intron | 20.0% |
| !! | AATCAATTGAAAAATCAAAG+TGG | + | chr6_2:45083497-45083516 | Msa0918150:intron | 20.0% |
| !!! | TAGATTGTTATTTCGAAAAT+TGG | + | chr6_2:45083620-45083639 | Msa0918150:intron | 20.0% |
| !! | GAAAAATGTAAATGTTTGTT+TGG | - | chr6_2:45084295-45084314 | None:intergenic | 20.0% |
| !! | TATGCAAAATTTGAAAATTG+AGG | + | chr6_2:45084890-45084909 | Msa0918150:intron | 20.0% |
| !! | ATGCAAAATTTGAAAATTGA+GGG | + | chr6_2:45084891-45084910 | Msa0918150:intron | 20.0% |
| !!! | CAGTTTCTTAAGTTTTAATT+AGG | + | chr6_2:45085046-45085065 | Msa0918150:intron | 20.0% |
| !! | CATTGTTTCGATTATAAATT+TGG | - | chr6_2:45085138-45085157 | None:intergenic | 20.0% |
| !! | TATTATTTCCAAAGATCAAT+AGG | - | chr6_2:45085296-45085315 | None:intergenic | 20.0% |
| !!! | ATTGATCTTTGGAAATAATA+CGG | + | chr6_2:45085296-45085315 | Msa0918150:intron | 20.0% |
| !!! | ATTTTTTTTTTCCAACATCA+TGG | + | chr6_2:45085471-45085490 | Msa0918150:intron | 20.0% |
| !! | ATGTGAGATTGATAAAATTA+CGG | - | chr6_2:45085504-45085523 | None:intergenic | 20.0% |
| !!! | TTAACTTTTGTGCTATATAA+AGG | - | chr6_2:45085547-45085566 | None:intergenic | 20.0% |
| !!! | TTTGAGTTTAAATCATTTGA+TGG | + | chr6_2:45086060-45086079 | Msa0918150:CDS | 20.0% |
| !! | GTCATCATAAAATAAAACTT+AGG | - | chr6_2:45086548-45086567 | None:intergenic | 20.0% |
| !!! | ATATTATGGGTTGATAATTC+AGG | + | chr6_2:45081995-45082014 | Msa0918150:CDS | 25.0% |
| ! | TATGATGTTGTTACTAAGAA+TGG | + | chr6_2:45082148-45082167 | Msa0918150:CDS | 25.0% |
| ! | CAACTTTGTTCCATAATTAT+AGG | + | chr6_2:45082387-45082406 | Msa0918150:intron | 25.0% |
| !! | AAGCAAGATGAAATTGTTTT+AGG | + | chr6_2:45082413-45082432 | Msa0918150:CDS | 25.0% |
| ! | TAGAAGGAAATAAAGTTATG+TGG | - | chr6_2:45082694-45082713 | None:intergenic | 25.0% |
| ! | ATTTACACATCCAAATTAGA+AGG | - | chr6_2:45082710-45082729 | None:intergenic | 25.0% |
| !! | GAACTCACACATTTTAAATA+TGG | + | chr6_2:45083131-45083150 | Msa0918150:intron | 25.0% |
| !! | ACATTTTAAATATGGAGAAG+TGG | + | chr6_2:45083139-45083158 | Msa0918150:intron | 25.0% |
| !! | CATTTTAAATATGGAGAAGT+GGG | + | chr6_2:45083140-45083159 | Msa0918150:intron | 25.0% |
| !! | ATTTTAAATATGGAGAAGTG+GGG | + | chr6_2:45083141-45083160 | Msa0918150:intron | 25.0% |
| ! | ATTGAAAAATCAAAGTGGAA+TGG | + | chr6_2:45083502-45083521 | Msa0918150:intron | 25.0% |
| ! | GCTATTTGAAAAACAAAACT+TGG | - | chr6_2:45083646-45083665 | None:intergenic | 25.0% |
| ! | TCTTCATGTTTATGAGTAAT+TGG | - | chr6_2:45083793-45083812 | None:intergenic | 25.0% |
| !! | TTAATTTTTACCTGTTCTAC+TGG | - | chr6_2:45083949-45083968 | None:intergenic | 25.0% |
| ! | AGTAGAACAGGTAAAAATTA+AGG | + | chr6_2:45083948-45083967 | Msa0918150:intron | 25.0% |
| !!! | AAATTAAGGAGTTTTGAACT+TGG | + | chr6_2:45083962-45083981 | Msa0918150:intron | 25.0% |
| ! | AATAAATTCTGCATCTAGAA+TGG | - | chr6_2:45084196-45084215 | None:intergenic | 25.0% |
| !!! | AAAATGGATTTTGACATGTT+TGG | - | chr6_2:45084233-45084252 | None:intergenic | 25.0% |
| ! | CTATACAATGAATGCAAAAT+TGG | - | chr6_2:45085012-45085031 | None:intergenic | 25.0% |
| ! | ATTCATTGTATAGACAATGA+AGG | + | chr6_2:45085019-45085038 | Msa0918150:intron | 25.0% |
| ! | ATAAACTACCTATTGATCTT+TGG | + | chr6_2:45085285-45085304 | Msa0918150:intron | 25.0% |
| ! | GAATATATAAAGTGCATGTT+TGG | + | chr6_2:45085394-45085413 | Msa0918150:intron | 25.0% |
| !! | CAGTGACTTACATTAATTTT+GGG | + | chr6_2:45085441-45085460 | Msa0918150:intron | 25.0% |
| ! | AAAGTATGGAATATCAACTT+TGG | + | chr6_2:45085701-45085720 | Msa0918150:CDS | 25.0% |
| ! | AAGTATGGAATATCAACTTT+GGG | + | chr6_2:45085702-45085721 | Msa0918150:CDS | 25.0% |
| ! | ATATAATTTAGGAGAATGAG+TGG | - | chr6_2:45085817-45085836 | None:intergenic | 25.0% |
| ! | GTTTATATTATCTTACCAAC+AGG | - | chr6_2:45086168-45086187 | None:intergenic | 25.0% |
| ! | CAATCATACAAATAAGCAAA+GGG | - | chr6_2:45086252-45086271 | None:intergenic | 25.0% |
| ! | ACAATCATACAAATAAGCAA+AGG | - | chr6_2:45086253-45086272 | None:intergenic | 25.0% |
| !! | ATGATTGTTGCACAATATTT+TGG | + | chr6_2:45086265-45086284 | Msa0918150:intron | 25.0% |
| !!! | AAAGATTCTGAAAGTGATTT+TGG | - | chr6_2:45086387-45086406 | None:intergenic | 25.0% |
| ! | AAAATCACTTTCAGAATCTT+TGG | + | chr6_2:45086386-45086405 | Msa0918150:CDS | 25.0% |
| ! | CATTAAAAGATAATAAGGGA+TGG | - | chr6_2:45086664-45086683 | None:intergenic | 25.0% |
| AAATGAAACATCAGTGTCTA+AGG | - | chr6_2:45081969-45081988 | None:intergenic | 30.0% | |
| !!! | TATGGTGATGACTTCTTTTT+TGG | + | chr6_2:45082192-45082211 | Msa0918150:CDS | 30.0% |
| CACCTGATTTATCTACTAAA+AGG | + | chr6_2:45082266-45082285 | Msa0918150:CDS | 30.0% | |
| ! | GTCCTTTTAGTAGATAAATC+AGG | - | chr6_2:45082271-45082290 | None:intergenic | 30.0% |
| TTGAAGGAATTTGTATACCA+AGG | - | chr6_2:45082298-45082317 | None:intergenic | 30.0% | |
| !! | AATTTTGGAGACTCTTCTTA+AGG | - | chr6_2:45082489-45082508 | None:intergenic | 30.0% |
| TCTCAAAGATGAATTTGACT+TGG | + | chr6_2:45082508-45082527 | Msa0918150:CDS | 30.0% | |
| !! | AAGATGAATTTGACTTGGTA+TGG | + | chr6_2:45082513-45082532 | Msa0918150:intron | 30.0% |
| ! | TTGTCTAAATTTGGTTCAGT+AGG | - | chr6_2:45082569-45082588 | None:intergenic | 30.0% |
| ATCCAAATTCGTGTTAATGT+TGG | + | chr6_2:45082781-45082800 | Msa0918150:intron | 30.0% | |
| !!! | AAAGTACAACCCCTTTTTTT+TGG | + | chr6_2:45082838-45082857 | Msa0918150:intron | 30.0% |
| AAAAACAAGTTCCTTTGTAG+CGG | - | chr6_2:45082936-45082955 | None:intergenic | 30.0% | |
| !!! | TTTTGTTGTTGTTGCATTAC+CGG | + | chr6_2:45082952-45082971 | Msa0918150:CDS | 30.0% |
| !! | TTTTCTTTCAAGTAGCTTAG+TGG | + | chr6_2:45083105-45083124 | Msa0918150:intron | 30.0% |
| ! | TTTTAAATATGGAGAAGTGG+GGG | + | chr6_2:45083142-45083161 | Msa0918150:intron | 30.0% |
| ATATTGCATATTATATGCGG+TGG | - | chr6_2:45083189-45083208 | None:intergenic | 30.0% | |
| GGGATATTGCATATTATATG+CGG | - | chr6_2:45083192-45083211 | None:intergenic | 30.0% | |
| !! | ACGTCAAAAGTATCTCAAAA+AGG | + | chr6_2:45083325-45083344 | Msa0918150:intron | 30.0% |
| ! | AAAGTATCTCAAAAAGGTGT+TGG | + | chr6_2:45083331-45083350 | Msa0918150:intron | 30.0% |
| !! | AAGTATCTCAAAAAGGTGTT+GGG | + | chr6_2:45083332-45083351 | Msa0918150:intron | 30.0% |
| AGAAAAATAACGGTAACTCA+TGG | + | chr6_2:45083559-45083578 | Msa0918150:intron | 30.0% | |
| ! | AAGTAACTTCACGAAGTATT+GGG | - | chr6_2:45083903-45083922 | None:intergenic | 30.0% |
| TACTTCTGCTTTACATTCAA+TGG | + | chr6_2:45083918-45083937 | Msa0918150:CDS | 30.0% | |
| ACTTCTGCTTTACATTCAAT+GGG | + | chr6_2:45083919-45083938 | Msa0918150:CDS | 30.0% | |
| ! | AATCGATGATTTTGCAAGAT+TGG | + | chr6_2:45084054-45084073 | Msa0918150:intron | 30.0% |
| !!! | TGATTTTGCAAGATTGGTTT+TGG | + | chr6_2:45084060-45084079 | Msa0918150:intron | 30.0% |
| !!! | TGTTTGGTTCTACTTTTGTA+GGG | - | chr6_2:45084279-45084298 | None:intergenic | 30.0% |
| !!! | TTGTTTGGTTCTACTTTTGT+AGG | - | chr6_2:45084280-45084299 | None:intergenic | 30.0% |
| !! | AACTTTTGGGAAGGATTTTT+TGG | - | chr6_2:45084317-45084336 | None:intergenic | 30.0% |
| TTAAATATGTGGCTATGATG+TGG | + | chr6_2:45084641-45084660 | Msa0918150:intron | 30.0% | |
| !!! | GCTTTTTTGGTAAACAAAGA+TGG | + | chr6_2:45084705-45084724 | Msa0918150:intron | 30.0% |
| !!! | GATCTAGTGTGTTTTGATAA+AGG | - | chr6_2:45085217-45085236 | None:intergenic | 30.0% |
| AACTCCATACAGGTAAATTT+GGG | - | chr6_2:45085355-45085374 | None:intergenic | 30.0% | |
| AAACTCCATACAGGTAAATT+TGG | - | chr6_2:45085356-45085375 | None:intergenic | 30.0% | |
| TTATAAGCTAAACTCCATAC+AGG | - | chr6_2:45085365-45085384 | None:intergenic | 30.0% | |
| ! | GCAGTGACTTACATTAATTT+TGG | + | chr6_2:45085440-45085459 | Msa0918150:intron | 30.0% |
| !!! | TTTTTTTTCCAACATCATGG+TGG | + | chr6_2:45085474-45085493 | Msa0918150:intron | 30.0% |
| CAGATGCCATAAATACATTT+CGG | - | chr6_2:45085671-45085690 | None:intergenic | 30.0% | |
| TCTGATGAATCATCAAAGTA+TGG | + | chr6_2:45085687-45085706 | Msa0918150:CDS | 30.0% | |
| AGTATGGAATATCAACTTTG+GGG | + | chr6_2:45085703-45085722 | Msa0918150:CDS | 30.0% | |
| GCTACAAAAGACAAAATAGA+AGG | - | chr6_2:45085762-45085781 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTTGATCCAGAAAG+TGG | + | chr6_2:45085842-45085861 | Msa0918150:intron | 30.0% |
| ! | TTTTTCTTGATCCAGAAAGT+GGG | + | chr6_2:45085843-45085862 | Msa0918150:intron | 30.0% |
| GGGACATCAAGAATTTATTT+CGG | + | chr6_2:45085863-45085882 | Msa0918150:intron | 30.0% | |
| CGAAATCAAAATATTAGTCG+TGG | + | chr6_2:45086572-45086591 | Msa0918150:intron | 30.0% | |
| TAAAAGATAATAAGGGATGG+TGG | - | chr6_2:45086661-45086680 | None:intergenic | 30.0% | |
| AAGCTTCAAAGTTAGTTGAT+TGG | - | chr6_2:45086703-45086722 | None:intergenic | 30.0% | |
| ! | TTGATGTTATTTATGTTGCC+AGG | + | chr6_2:45086721-45086740 | Msa0918150:intron | 30.0% |
| !! | GTGCTGTGAAATTTTGTTTC+AGG | + | chr6_2:45082105-45082124 | Msa0918150:intron | 35.0% |
| ACATCATAGAAACGCTTTCT+AGG | - | chr6_2:45082136-45082155 | None:intergenic | 35.0% | |
| GTTGTTACTAAGAATGGTGT+TGG | + | chr6_2:45082154-45082173 | Msa0918150:CDS | 35.0% | |
| TGGTTTAGCATTTGTGAGTA+TGG | + | chr6_2:45082174-45082193 | Msa0918150:CDS | 35.0% | |
| !!! | GTGATGACTTCTTTTTTGGA+TGG | + | chr6_2:45082196-45082215 | Msa0918150:CDS | 35.0% |
| CTACTAAAAGGACAATTCCT+TGG | + | chr6_2:45082278-45082297 | Msa0918150:CDS | 35.0% | |
| CTTGCTTGCTCCTATAATTA+TGG | - | chr6_2:45082400-45082419 | None:intergenic | 35.0% | |
| TCGCGAAAGTTGTCTAAATT+TGG | - | chr6_2:45082578-45082597 | None:intergenic | 35.0% | |
| CACCAACATTAACACGAATT+TGG | - | chr6_2:45082786-45082805 | None:intergenic | 35.0% | |
| CAAATTCGTGTTAATGTTGG+TGG | + | chr6_2:45082784-45082803 | Msa0918150:intron | 35.0% | |
| CACAAACGACCAAAAAAAAG+GGG | - | chr6_2:45082850-45082869 | None:intergenic | 35.0% | |
| CCACAAACGACCAAAAAAAA+GGG | - | chr6_2:45082851-45082870 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTGGTCGTTTGTGG+CGG | + | chr6_2:45082851-45082870 | Msa0918150:intron | 35.0% |
| !!! | GTGTTAGTTGCTTTGGTTTT+TGG | - | chr6_2:45082878-45082897 | None:intergenic | 35.0% |
| AAAACCAAAGCAACTAACAC+TGG | + | chr6_2:45082878-45082897 | Msa0918150:intron | 35.0% | |
| ACACAAAAATTAGATTGGCG+AGG | + | chr6_2:45083269-45083288 | Msa0918150:intron | 35.0% | |
| AAAAATTAGATTGGCGAGGA+CGG | + | chr6_2:45083273-45083292 | Msa0918150:intron | 35.0% | |
| TTTCTCTCTAAGCAACATTG+TGG | - | chr6_2:45083451-45083470 | None:intergenic | 35.0% | |
| ! | ACAATGTTGCTTAGAGAGAA+AGG | + | chr6_2:45083450-45083469 | Msa0918150:intron | 35.0% |
| ATGAAGAAAACCAACCATAC+AGG | + | chr6_2:45083806-45083825 | Msa0918150:intron | 35.0% | |
| TGAAGAAAACCAACCATACA+GGG | + | chr6_2:45083807-45083826 | Msa0918150:intron | 35.0% | |
| !! | AGTAACTTCACGAAGTATTG+GGG | - | chr6_2:45083902-45083921 | None:intergenic | 35.0% |
| GAAGTAACTTCACGAAGTAT+TGG | - | chr6_2:45083904-45083923 | None:intergenic | 35.0% | |
| TGAACTTGGTCAATTGCAAA+TGG | + | chr6_2:45083976-45083995 | Msa0918150:intron | 35.0% | |
| TGTATGACAATGACTTTGTG+TGG | + | chr6_2:45084001-45084020 | Msa0918150:intron | 35.0% | |
| TTTACACACGTGAAACTGTT+AGG | + | chr6_2:45084501-45084520 | Msa0918150:CDS | 35.0% | |
| TTACACACGTGAAACTGTTA+GGG | + | chr6_2:45084502-45084521 | Msa0918150:CDS | 35.0% | |
| !!! | ACAGAAGCAACATGCTTTTT+TGG | + | chr6_2:45084692-45084711 | Msa0918150:intron | 35.0% |
| GAGAGTTCTCACGATAAATT+TGG | - | chr6_2:45085116-45085135 | None:intergenic | 35.0% | |
| ! | GGATGTTGTTTACTTACAAG+AGG | + | chr6_2:45085317-45085336 | Msa0918150:intron | 35.0% |
| ACTCCATACAGGTAAATTTG+GGG | - | chr6_2:45085354-45085373 | None:intergenic | 35.0% | |
| AAAGTGCATGTTTGGATGAA+TGG | + | chr6_2:45085402-45085421 | Msa0918150:intron | 35.0% | |
| ATCAATCTCACATCTCAAAG+TGG | + | chr6_2:45085511-45085530 | Msa0918150:intron | 35.0% | |
| !! | GTGTTTTGTTGCACTATTGA+AGG | + | chr6_2:45085586-45085605 | Msa0918150:intron | 35.0% |
| AAGGTACACATTAGATGATC+TGG | + | chr6_2:45085605-45085624 | Msa0918150:intron | 35.0% | |
| AGGTACACATTAGATGATCT+GGG | + | chr6_2:45085606-45085625 | Msa0918150:intron | 35.0% | |
| GAATGGCCGAAATGTATTTA+TGG | + | chr6_2:45085662-45085681 | Msa0918150:CDS | 35.0% | |
| ! | AACTTTGGGGAAAGAGTTTA+TGG | + | chr6_2:45085716-45085735 | Msa0918150:CDS | 35.0% |
| ATAGATAGCAGAAACCTGAT+AGG | - | chr6_2:45085792-45085811 | None:intergenic | 35.0% | |
| AAATTACTCGCAAAACCATC+AGG | - | chr6_2:45086042-45086061 | None:intergenic | 35.0% | |
| TAGCAGATAAGCCTAAGTAT+GGG | - | chr6_2:45086095-45086114 | None:intergenic | 35.0% | |
| ATAGCAGATAAGCCTAAGTA+TGG | - | chr6_2:45086096-45086115 | None:intergenic | 35.0% | |
| TTATCTGCTATAATTGCTGC+TGG | + | chr6_2:45086105-45086124 | Msa0918150:CDS | 35.0% | |
| ATTATCTTACCAACAGGTTC+AGG | - | chr6_2:45086162-45086181 | None:intergenic | 35.0% | |
| !!! | CTCTGAAGTTTTTCTGGATT+TGG | - | chr6_2:45086360-45086379 | None:intergenic | 35.0% |
| !!! | GGTAATCTCTGAAGTTTTTC+TGG | - | chr6_2:45086366-45086385 | None:intergenic | 35.0% |
| ! | ATCTTTGGAAGCTCTTCATA+AGG | + | chr6_2:45086401-45086420 | Msa0918150:CDS | 35.0% |
| ! | GACTTTCTAGAGGAGTTTAT+TGG | + | chr6_2:45086426-45086445 | Msa0918150:CDS | 35.0% |
| AGTAATGATCAATTTCAGCC+TGG | - | chr6_2:45086742-45086761 | None:intergenic | 35.0% | |
| TGATCATTACTCGAAGAACA+AGG | + | chr6_2:45086751-45086770 | Msa0918150:CDS | 35.0% | |
| !! | GATTGAGTTGAGTAAAGCAG+TGG | + | chr6_2:45081922-45081941 | Msa0918150:CDS | 40.0% |
| AGTGGAAGATGTTGAACTTG+TGG | + | chr6_2:45081940-45081959 | Msa0918150:CDS | 40.0% | |
| !!! | CCCTTTTTTTTGGTCGTTTG+TGG | + | chr6_2:45082848-45082867 | Msa0918150:intron | 40.0% |
| GCCACAAACGACCAAAAAAA+AGG | - | chr6_2:45082852-45082871 | None:intergenic | 40.0% | |
| CAAACCAGTGTTAGTTGCTT+TGG | - | chr6_2:45082885-45082904 | None:intergenic | 40.0% | |
| GTTTGTGTACCATGCTTTAC+TGG | + | chr6_2:45082900-45082919 | Msa0918150:intron | 40.0% | |
| !! | CAGCGTCCCCATTTTTAAAA+AGG | - | chr6_2:45083031-45083050 | None:intergenic | 40.0% |
| CATATTATATGCGGTGGTTG+AGG | - | chr6_2:45083183-45083202 | None:intergenic | 40.0% | |
| ATATCCCTAGCTAAACTCAC+AGG | + | chr6_2:45083205-45083224 | Msa0918150:intron | 40.0% | |
| TATCCCTAGCTAAACTCACA+GGG | + | chr6_2:45083206-45083225 | Msa0918150:intron | 40.0% | |
| CAAGATGCTTTACTCTCTGT+TGG | - | chr6_2:45083390-45083409 | None:intergenic | 40.0% | |
| !! | TTAACTTGTTGTCGACTTCC+AGG | + | chr6_2:45083673-45083692 | Msa0918150:intron | 40.0% |
| ! | TTCTCTTGAAGAGCGCAATA+AGG | + | chr6_2:45083726-45083745 | Msa0918150:CDS | 40.0% |
| ! | TTGAAGAGCGCAATAAGGTA+TGG | + | chr6_2:45083731-45083750 | Msa0918150:intron | 40.0% |
| AAAACCAACCATACAGGGAA+GGG | + | chr6_2:45083812-45083831 | Msa0918150:intron | 40.0% | |
| AATGGGAATTCCAGTAGAAC+AGG | + | chr6_2:45083936-45083955 | Msa0918150:CDS | 40.0% | |
| ATTCAGAAAATGGGCCACAA+GGG | - | chr6_2:45084342-45084361 | None:intergenic | 40.0% | |
| AATTCAGAAAATGGGCCACA+AGG | - | chr6_2:45084343-45084362 | None:intergenic | 40.0% | |
| TTACATGCAGAAGCTGGAAA+AGG | + | chr6_2:45084422-45084441 | Msa0918150:CDS | 40.0% | |
| TGGAAAAGGTCAATTTGAGC+TGG | + | chr6_2:45084436-45084455 | Msa0918150:CDS | 40.0% | |
| !! | AGGTCAATTTGAGCTGGTTT+TGG | + | chr6_2:45084442-45084461 | Msa0918150:CDS | 40.0% |
| !!! | GGTCAATTTGAGCTGGTTTT+GGG | + | chr6_2:45084443-45084462 | Msa0918150:CDS | 40.0% |
| AGGGCAATTGCTAGAAAACA+TGG | + | chr6_2:45084521-45084540 | Msa0918150:CDS | 40.0% | |
| ! | GCATGTTGCTTCTGTAGTTT+AGG | - | chr6_2:45084687-45084706 | None:intergenic | 40.0% |
| ! | ACAATGCCTAAGAGTGTGTT+TGG | + | chr6_2:45084743-45084762 | Msa0918150:intron | 40.0% |
| ACACCCCAAATTTACCTGTA+TGG | + | chr6_2:45085348-45085367 | Msa0918150:intron | 40.0% | |
| ACATTAGATGATCTGGGTTC+TGG | + | chr6_2:45085612-45085631 | Msa0918150:CDS | 40.0% | |
| ATTCTTGATGTCCCACTTTC+TGG | - | chr6_2:45085857-45085876 | None:intergenic | 40.0% | |
| !! | TGTTCTGGGGAAATGAGAAT+AGG | + | chr6_2:45085980-45085999 | Msa0918150:CDS | 40.0% |
| !! | GTTCTGGGGAAATGAGAATA+GGG | + | chr6_2:45085981-45086000 | Msa0918150:CDS | 40.0% |
| ! | ATAATTGCTGCTGGCATTGA+TGG | + | chr6_2:45086114-45086133 | Msa0918150:CDS | 40.0% |
| ! | TCATAAGGCTGACTTTCTAG+AGG | + | chr6_2:45086416-45086435 | Msa0918150:CDS | 40.0% |
| TACCTTTCGAATCGCCTTTA+TGG | - | chr6_2:45086469-45086488 | None:intergenic | 40.0% | |
| ACGACTGATATTTGTGACTG+TGG | - | chr6_2:45086500-45086519 | None:intergenic | 40.0% | |
| CAGTCACAAATATCAGTCGT+AGG | + | chr6_2:45086500-45086519 | Msa0918150:intron | 40.0% | |
| ! | TTTTTGGATGGATCTCCAGC+TGG | + | chr6_2:45082208-45082227 | Msa0918150:CDS | 45.0% |
| !! | GGTTCTGGTTTAGGTTCAGT+TGG | + | chr6_2:45082229-45082248 | Msa0918150:CDS | 45.0% |
| GGTGATCTGAATCTACAACC+TGG | + | chr6_2:45082434-45082453 | Msa0918150:CDS | 45.0% | |
| ATCTACAACCTGGTCAAGCT+TGG | + | chr6_2:45082444-45082463 | Msa0918150:CDS | 45.0% | |
| TCTACAACCTGGTCAAGCTT+GGG | + | chr6_2:45082445-45082464 | Msa0918150:CDS | 45.0% | |
| CAATATTCCCAAGCTTGACC+AGG | - | chr6_2:45082455-45082474 | None:intergenic | 45.0% | |
| ! | CTCTTCTTAAGGCGTCTCTT+GGG | - | chr6_2:45082478-45082497 | None:intergenic | 45.0% |
| ! | ACTCTTCTTAAGGCGTCTCT+TGG | - | chr6_2:45082479-45082498 | None:intergenic | 45.0% |
| ACTTGGTATGGTGCACAACT+TGG | + | chr6_2:45082525-45082544 | Msa0918150:intron | 45.0% | |
| AAGGGGTTGTACTTTGCGAT+AGG | - | chr6_2:45082833-45082852 | None:intergenic | 45.0% | |
| TGTGTACCATGCTTTACTGG+TGG | + | chr6_2:45082903-45082922 | Msa0918150:intron | 45.0% | |
| GTGTACCATGCTTTACTGGT+GGG | + | chr6_2:45082904-45082923 | Msa0918150:intron | 45.0% | |
| ! | TGTTGTTGTTGCATTACCGG+CGG | + | chr6_2:45082955-45082974 | Msa0918150:CDS | 45.0% |
| CATCCCTGTGAGTTTAGCTA+GGG | - | chr6_2:45083212-45083231 | None:intergenic | 45.0% | |
| ACATCCCTGTGAGTTTAGCT+AGG | - | chr6_2:45083213-45083232 | None:intergenic | 45.0% | |
| CAAATCCTGCATTCAGTACC+TGG | - | chr6_2:45083694-45083713 | None:intergenic | 45.0% | |
| GAAAACCAACCATACAGGGA+AGG | + | chr6_2:45083811-45083830 | Msa0918150:intron | 45.0% | |
| TCTTCTTTCCCTTCCCTGTA+TGG | - | chr6_2:45083823-45083842 | None:intergenic | 45.0% | |
| ACAGGGAAGGGAAAGAAGAA+TGG | + | chr6_2:45083824-45083843 | Msa0918150:intron | 45.0% | |
| AGCAACATCAAATGCTGACG+AGG | - | chr6_2:45083878-45083897 | None:intergenic | 45.0% | |
| !! | ACAAGGGACAACTTTTGGGA+AGG | - | chr6_2:45084326-45084345 | None:intergenic | 45.0% |
| TTCCCAAAAGTTGTCCCTTG+TGG | + | chr6_2:45084325-45084344 | Msa0918150:intron | 45.0% | |
| TTGCAGTTACATGCAGAAGC+TGG | + | chr6_2:45084416-45084435 | Msa0918150:intron | 45.0% | |
| !!! | TGAGCTGGTTTTGGGACATA+TGG | + | chr6_2:45084451-45084470 | Msa0918150:CDS | 45.0% |
| TCCAAAGTACGTACCAAGAG+TGG | + | chr6_2:45084562-45084581 | Msa0918150:intron | 45.0% | |
| GCAATGGATATTGCCACTCT+TGG | - | chr6_2:45084578-45084597 | None:intergenic | 45.0% | |
| ! | TGCCTAAGAGTGTGTTTGGA+TGG | + | chr6_2:45084747-45084766 | Msa0918150:intron | 45.0% |
| ! | GCCTAAGAGTGTGTTTGGAT+GGG | + | chr6_2:45084748-45084767 | Msa0918150:intron | 45.0% |
| TCCCATCCAAACACACTCTT+AGG | - | chr6_2:45084752-45084771 | None:intergenic | 45.0% | |
| GCCATGTTCATCTAAGCTTG+TGG | + | chr6_2:45085637-45085656 | Msa0918150:CDS | 45.0% | |
| GCCACAAGCTTAGATGAACA+TGG | - | chr6_2:45085641-45085660 | None:intergenic | 45.0% | |
| CATCTAAGCTTGTGGCAGAA+TGG | + | chr6_2:45085645-45085664 | Msa0918150:CDS | 45.0% | |
| TTGGGGAAAGAGTTTATGGC+TGG | + | chr6_2:45085720-45085739 | Msa0918150:CDS | 45.0% | |
| TTGTAGCACCACTTCCTATC+AGG | + | chr6_2:45085775-45085794 | Msa0918150:CDS | 45.0% | |
| AGCAGAAACCTGATAGGAAG+TGG | - | chr6_2:45085786-45085805 | None:intergenic | 45.0% | |
| TATGCACCACTCCATGTGTT+CGG | - | chr6_2:45085958-45085977 | None:intergenic | 45.0% | |
| GAGTGGTGCATACATGTTCT+GGG | + | chr6_2:45085966-45085985 | Msa0918150:CDS | 45.0% | |
| AGTGGTGCATACATGTTCTG+GGG | + | chr6_2:45085967-45085986 | Msa0918150:CDS | 45.0% | |
| GGTTCTGCAAACCCATACTT+AGG | + | chr6_2:45086081-45086100 | Msa0918150:CDS | 45.0% | |
| !! | CTGGCATTGATGGTTTACGT+AGG | + | chr6_2:45086124-45086143 | Msa0918150:CDS | 45.0% |
| CTTTCACTTCCTGAACCTGT+TGG | + | chr6_2:45086150-45086169 | Msa0918150:CDS | 45.0% | |
| ! | CAAGTTGCTGACTGCCATAA+AGG | + | chr6_2:45086452-45086471 | Msa0918150:CDS | 45.0% |
| TGCCATAAAGGCGATTCGAA+AGG | + | chr6_2:45086464-45086483 | Msa0918150:CDS | 45.0% | |
| TCAGTCGTAGGATGAAGACT+AGG | + | chr6_2:45086512-45086531 | Msa0918150:intron | 45.0% | |
| !!! | CAAATTTTTAAAATTTTAAT+GGG | + | chr6_2:45084923-45084942 | Msa0918150:intron | 5.0% |
| !! | TCTCCAGCTGGTTCTGGTTT+AGG | + | chr6_2:45082220-45082239 | Msa0918150:CDS | 50.0% |
| GAACCTAAACCAGAACCAGC+TGG | - | chr6_2:45082226-45082245 | None:intergenic | 50.0% | |
| CTTTGCCCACCAGTAAAGCA+TGG | - | chr6_2:45082912-45082931 | None:intergenic | 50.0% | |
| ! | CATGCTTTACTGGTGGGCAA+AGG | + | chr6_2:45082910-45082929 | Msa0918150:intron | 50.0% |
| GGTGGTTGAGGTTCGAACTT+TGG | - | chr6_2:45083171-45083190 | None:intergenic | 50.0% | |
| !! | GACTTCCAGGTACTGAATGC+AGG | + | chr6_2:45083686-45083705 | Msa0918150:intron | 50.0% |
| CTTTCCCTTCCCTGTATGGT+TGG | - | chr6_2:45083819-45083838 | None:intergenic | 50.0% | |
| ATGCTGACGAGGAGCAGTAA+GGG | - | chr6_2:45083867-45083886 | None:intergenic | 50.0% | |
| AATGCTGACGAGGAGCAGTA+AGG | - | chr6_2:45083868-45083887 | None:intergenic | 50.0% | |
| ! | GGCCACAAGGGACAACTTTT+GGG | - | chr6_2:45084330-45084349 | None:intergenic | 50.0% |
| GCCACTCTTGGTACGTACTT+TGG | - | chr6_2:45084566-45084585 | None:intergenic | 50.0% | |
| ACGGTGAACCACCATGATGT+TGG | - | chr6_2:45085485-45085504 | None:intergenic | 50.0% | |
| ATCGATTGCAGCCGAACACA+TGG | + | chr6_2:45085944-45085963 | Msa0918150:CDS | 50.0% | |
| GGAGTGGTGCATACATGTTC+TGG | + | chr6_2:45085965-45085984 | Msa0918150:CDS | 50.0% | |
| CTGGGGAAATGAGAATAGGG+AGG | + | chr6_2:45085984-45086003 | Msa0918150:CDS | 50.0% | |
| AAACCATCAGGAGTTCCAGG+AGG | - | chr6_2:45086030-45086049 | None:intergenic | 50.0% | |
| GCAAAACCATCAGGAGTTCC+AGG | - | chr6_2:45086033-45086052 | None:intergenic | 50.0% | |
| ! | GATGGATCTCCAGCTGGTTC+TGG | + | chr6_2:45082214-45082233 | Msa0918150:CDS | 55.0% |
| ! | GTTGCATTACCGGCGGACTT+AGG | + | chr6_2:45082962-45082981 | Msa0918150:CDS | 55.0% |
| TGCTGACGAGGAGCAGTAAG+GGG | - | chr6_2:45083866-45083885 | None:intergenic | 55.0% | |
| ! | GGGCCACAAGGGACAACTTT+TGG | - | chr6_2:45084331-45084350 | None:intergenic | 55.0% |
| TTGCAGCCGAACACATGGAG+TGG | + | chr6_2:45085949-45085968 | Msa0918150:CDS | 55.0% | |
| GGAGGAGATGAAGCTCGCAA+TGG | - | chr6_2:45086012-45086031 | None:intergenic | 55.0% | |
| TTGCGAGCTTCATCTCCTCC+TGG | + | chr6_2:45086012-45086031 | Msa0918150:CDS | 55.0% | |
| TCTCCTCCTGGAACTCCTGA+TGG | + | chr6_2:45086024-45086043 | Msa0918150:CDS | 55.0% | |
| GTGGGCAAAGGCCGCTACAA+AGG | + | chr6_2:45082922-45082941 | Msa0918150:intron | 60.0% | |
| TTGCAGCGACCTAAGTCCGC+CGG | - | chr6_2:45082974-45082993 | None:intergenic | 60.0% | |
| GCGGACTTAGGTCGCTGCAA+AGG | + | chr6_2:45082974-45082993 | Msa0918150:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 45081914 | 45086805 | 45081914 | ID=Msa0918150;Name=Msa0918150 |
| chr6_2 | mRNA | 45081914 | 45086805 | 45081914 | ID=Msa0918150-mRNA-1;Parent=Msa0918150;Name=Msa0918150-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.5|0.36|0.90|1|1|11|0|478 |
| chr6_2 | exon | 45081914 | 45082033 | 45081914 | ID=Msa0918150-mRNA-1:exon:7069;Parent=Msa0918150-mRNA-1 |
| chr6_2 | exon | 45082127 | 45082299 | 45082127 | ID=Msa0918150-mRNA-1:exon:7070;Parent=Msa0918150-mRNA-1 |
| chr6_2 | exon | 45082409 | 45082529 | 45082409 | ID=Msa0918150-mRNA-1:exon:7071;Parent=Msa0918150-mRNA-1 |
| chr6_2 | exon | 45082932 | 45083003 | 45082932 | ID=Msa0918150-mRNA-1:exon:7072;Parent=Msa0918150-mRNA-1 |
| chr6_2 | exon | 45083695 | 45083747 | 45083695 | ID=Msa0918150-mRNA-1:exon:7073;Parent=Msa0918150-mRNA-1 |
| chr6_2 | exon | 45083828 | 45083957 | 45083828 | ID=Msa0918150-mRNA-1:exon:7074;Parent=Msa0918150-mRNA-1 |
| chr6_2 | exon | 45084422 | 45084567 | 45084422 | ID=Msa0918150-mRNA-1:exon:7075;Parent=Msa0918150-mRNA-1 |
| chr6_2 | exon | 45085608 | 45085796 | 45085608 | ID=Msa0918150-mRNA-1:exon:7076;Parent=Msa0918150-mRNA-1 |
| chr6_2 | exon | 45085939 | 45086171 | 45085939 | ID=Msa0918150-mRNA-1:exon:7077;Parent=Msa0918150-mRNA-1 |
| chr6_2 | exon | 45086349 | 45086485 | 45086349 | ID=Msa0918150-mRNA-1:exon:7078;Parent=Msa0918150-mRNA-1 |
| chr6_2 | exon | 45086743 | 45086805 | 45086743 | ID=Msa0918150-mRNA-1:exon:7079;Parent=Msa0918150-mRNA-1 |
| chr6_2 | CDS | 45081914 | 45082033 | 45081914 | ID=Msa0918150-mRNA-1:cds;Parent=Msa0918150-mRNA-1 |
| chr6_2 | CDS | 45082127 | 45082299 | 45082127 | ID=Msa0918150-mRNA-1:cds;Parent=Msa0918150-mRNA-1 |
| chr6_2 | CDS | 45082409 | 45082529 | 45082409 | ID=Msa0918150-mRNA-1:cds;Parent=Msa0918150-mRNA-1 |
| chr6_2 | CDS | 45082932 | 45083003 | 45082932 | ID=Msa0918150-mRNA-1:cds;Parent=Msa0918150-mRNA-1 |
| chr6_2 | CDS | 45083695 | 45083747 | 45083695 | ID=Msa0918150-mRNA-1:cds;Parent=Msa0918150-mRNA-1 |
| chr6_2 | CDS | 45083828 | 45083957 | 45083828 | ID=Msa0918150-mRNA-1:cds;Parent=Msa0918150-mRNA-1 |
| chr6_2 | CDS | 45084422 | 45084567 | 45084422 | ID=Msa0918150-mRNA-1:cds;Parent=Msa0918150-mRNA-1 |
| chr6_2 | CDS | 45085608 | 45085796 | 45085608 | ID=Msa0918150-mRNA-1:cds;Parent=Msa0918150-mRNA-1 |
| chr6_2 | CDS | 45085939 | 45086171 | 45085939 | ID=Msa0918150-mRNA-1:cds;Parent=Msa0918150-mRNA-1 |
| chr6_2 | CDS | 45086349 | 45086485 | 45086349 | ID=Msa0918150-mRNA-1:cds;Parent=Msa0918150-mRNA-1 |
| chr6_2 | CDS | 45086743 | 45086805 | 45086743 | ID=Msa0918150-mRNA-1:cds;Parent=Msa0918150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
