Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0990490 | XP_013441931.1 | 97.797 | 454 | 10 | 0 | 1 | 454 | 1 | 454 | 0.0 | 921 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0990490 | sp|Q86B00|GLNA1_DICDI | 31.180 | 449 | 283 | 10 | 8 | 436 | 37 | 479 | 3.10e-66 | 223 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0990490 | Q9SC91 | 97.797 | 454 | 10 | 0 | 1 | 454 | 1 | 454 | 0.0 | 921 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0022900 | Msa0990490 | 0.801453 | 8.942565e-49 | -8.615850e-47 |
| Msa0048950 | Msa0990490 | 0.800004 | 1.766148e-48 | -8.615850e-47 |
| Msa0059880 | Msa0990490 | 0.800326 | 1.518945e-48 | -8.615850e-47 |
| Msa0075560 | Msa0990490 | 0.803050 | 4.194238e-49 | -8.615850e-47 |
| Msa0118660 | Msa0990490 | 0.809023 | 2.322352e-50 | -8.615850e-47 |
| Msa0120050 | Msa0990490 | 0.803567 | 3.278404e-49 | -8.615850e-47 |
| Msa0643190 | Msa0990490 | 0.800518 | 1.388344e-48 | -8.615850e-47 |
| Msa0643840 | Msa0990490 | 0.821815 | 3.303466e-53 | -8.615850e-47 |
| Msa0667600 | Msa0990490 | 0.808434 | 3.103456e-50 | -8.615850e-47 |
| Msa0735280 | Msa0990490 | 0.806314 | 8.737599e-50 | -8.615850e-47 |
| Msa0768670 | Msa0990490 | 0.822386 | 2.435727e-53 | -8.615850e-47 |
| Msa0768720 | Msa0990490 | 0.815575 | 8.616297e-52 | -8.615850e-47 |
| Msa0777250 | Msa0990490 | 0.811647 | 6.305702e-51 | -8.615850e-47 |
| Msa0814160 | Msa0990490 | 0.825328 | 4.975762e-54 | -8.615850e-47 |
| Msa0814230 | Msa0990490 | 0.822154 | 2.756986e-53 | -8.615850e-47 |
| Msa0150910 | Msa0990490 | 0.810776 | 9.743327e-51 | -8.615850e-47 |
| Msa0163340 | Msa0990490 | 0.818569 | 1.830314e-52 | -8.615850e-47 |
| Msa0209060 | Msa0990490 | 0.800709 | 1.269099e-48 | -8.615850e-47 |
| Msa0374520 | Msa0990490 | 0.801677 | 8.042096e-49 | -8.615850e-47 |
| Msa0374650 | Msa0990490 | 0.815782 | 7.748124e-52 | -8.615850e-47 |
| Msa0987640 | Msa0990490 | 0.848360 | 6.441552e-60 | -8.615850e-47 |
| Msa0990490 | Msa1021620 | 0.833657 | 4.702315e-56 | -8.615850e-47 |
| Msa0990490 | Msa1061670 | 0.814909 | 1.211825e-51 | -8.615850e-47 |
| Msa0990490 | Msa1064930 | 0.800335 | 1.512314e-48 | -8.615850e-47 |
| Msa0990490 | Msa1106680 | 0.820294 | 7.400928e-53 | -8.615850e-47 |
| Msa0990490 | Msa1106960 | 0.814976 | 1.170718e-51 | -8.615850e-47 |
| Msa0990490 | Msa1149020 | 0.803977 | 2.694015e-49 | -8.615850e-47 |
| Msa0990490 | Msa1262810 | 0.804224 | 2.393578e-49 | -8.615850e-47 |
| Msa0990490 | Msa1269050 | 0.825023 | 5.876039e-54 | -8.615850e-47 |
| Msa0990490 | Msa1323030 | 0.810260 | 1.259365e-50 | -8.615850e-47 |
| Msa0990490 | Msa1323120 | 0.805778 | 1.132876e-49 | -8.615850e-47 |
| Msa0990490 | Msa1368490 | 0.813358 | 2.665750e-51 | -8.615850e-47 |
| Msa0990490 | Msa1406840 | 0.803501 | 3.383145e-49 | -8.615850e-47 |
| Msa0990490 | Msa1445900 | 0.826369 | 2.818008e-54 | -8.615850e-47 |
| Msa0990490 | Msa1459610 | 0.822108 | 2.826079e-53 | -8.615850e-47 |
| Msa0253450 | Msa0990490 | 0.826426 | 2.731096e-54 | -8.615850e-47 |
| Msa0261400 | Msa0990490 | 0.804142 | 2.490062e-49 | -8.615850e-47 |
| Msa0281190 | Msa0990490 | 0.819190 | 1.322505e-52 | -8.615850e-47 |
| Msa0288540 | Msa0990490 | 0.800110 | 1.680725e-48 | -8.615850e-47 |
| Msa0299030 | Msa0990490 | 0.803764 | 2.983339e-49 | -8.615850e-47 |
| Msa0326770 | Msa0990490 | 0.817348 | 3.455474e-52 | -8.615850e-47 |
| Msa0535570 | Msa0990490 | 0.800074 | 1.709174e-48 | -8.615850e-47 |
| Msa0587920 | Msa0990490 | 0.812009 | 5.259538e-51 | -8.615850e-47 |
| Msa0591490 | Msa0990490 | 0.810968 | 8.853138e-51 | -8.615850e-47 |
| Msa0602050 | Msa0990490 | 0.817096 | 3.936936e-52 | -8.615850e-47 |
| Msa0854840 | Msa0990490 | 0.801766 | 7.713294e-49 | -8.615850e-47 |
| Msa0861730 | Msa0990490 | 0.800333 | 1.513903e-48 | -8.615850e-47 |
| Msa0869660 | Msa0990490 | 0.828351 | 9.437885e-55 | -8.615850e-47 |
| Msa0890240 | Msa0990490 | 0.844210 | 8.706086e-59 | -8.615850e-47 |
| Msa0896920 | Msa0990490 | 0.808093 | 3.668763e-50 | -8.615850e-47 |
| Msa0910830 | Msa0990490 | 0.813523 | 2.452272e-51 | -8.615850e-47 |
| Msa0913550 | Msa0990490 | 0.855120 | 7.806639e-62 | -8.615850e-47 |
| Msa0918150 | Msa0990490 | 0.927678 | 8.409582e-92 | -8.615850e-47 |
| Msa0935440 | Msa0990490 | 0.813493 | 2.489021e-51 | -8.615850e-47 |
| Msa0946010 | Msa0990490 | 0.813767 | 2.166148e-51 | -8.615850e-47 |
| Msa0951150 | Msa0990490 | 0.844141 | 9.083717e-59 | -8.615850e-47 |
| Msa0954980 | Msa0990490 | 0.869486 | 2.986170e-66 | -8.615850e-47 |
| Msa0960090 | Msa0990490 | 0.801572 | 8.454112e-49 | -8.615850e-47 |
| Msa0972370 | Msa0990490 | 0.818749 | 1.665868e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0990490 | MtrunA17_Chr6g0471351 | 97.368 | 456 | 10 | 1 | 1 | 454 | 1 | 456 | 0.0 | 916 |
| Msa0990490 | MtrunA17_Chr1g0180151 | 87.443 | 438 | 55 | 0 | 17 | 454 | 218 | 655 | 0.0 | 816 |
| Msa0990490 | MtrunA17_Chr3g0091091 | 81.758 | 455 | 80 | 3 | 1 | 454 | 22 | 474 | 0.0 | 769 |
| Msa0990490 | MtrunA17_Chr1g0180001 | 80.176 | 454 | 85 | 3 | 1 | 454 | 1 | 449 | 0.0 | 743 |
| Msa0990490 | MtrunA17_Chr1g0180191 | 84.483 | 232 | 36 | 0 | 17 | 248 | 404 | 635 | 1.28e-141 | 419 |
| Msa0990490 | MtrunA17_Chr1g0180211 | 88.889 | 144 | 16 | 0 | 311 | 454 | 12 | 155 | 2.04e-89 | 268 |
| Msa0990490 | MtrunA17_Chr1g0179971 | 84.000 | 125 | 20 | 0 | 193 | 317 | 1 | 125 | 2.49e-72 | 225 |
| Msa0990490 | MtrunA17_Chr1g0179981 | 76.761 | 142 | 32 | 1 | 1 | 142 | 1 | 141 | 5.83e-70 | 218 |
| Msa0990490 | MtrunA17_Chr3g0091051 | 75.000 | 68 | 15 | 2 | 311 | 378 | 27 | 92 | 1.89e-29 | 110 |
| Msa0990490 | MtrunA17_Chr1g0180201 | 87.500 | 40 | 5 | 0 | 273 | 312 | 1 | 40 | 1.60e-16 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0990490 | AT3G53180.1 | 65.682 | 440 | 149 | 1 | 17 | 454 | 413 | 852 | 0.0 | 625 |
Find 97 sgRNAs with CRISPR-Local
Find 448 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTCATCTTTGAGAATTT+TGG | 0.124972 | 6_4:+52093611 | None:intergenic |
| TACCTTTCGAATCGCCTTTA+TGG | 0.152682 | 6_4:+52087532 | None:intergenic |
| AAAGATTCTGAAAGTGATTT+TGG | 0.159408 | 6_4:+52087614 | None:intergenic |
| TTTCATTTGTTCGTATATTA+TGG | 0.185780 | 6_4:-52094131 | Msa0990490:CDS |
| AACTTTGGGAAAAGAGTTTA+TGG | 0.207112 | 6_4:-52088282 | Msa0990490:CDS |
| TCTCCAGCTGGTTCTGGTTT+AGG | 0.213117 | 6_4:-52093892 | Msa0990490:CDS |
| AAAATCACTTTCAGAATCTT+TGG | 0.244497 | 6_4:-52087612 | Msa0990490:CDS |
| CACCTGATTTATCTACTAAA+AGG | 0.245924 | 6_4:-52093846 | Msa0990490:CDS |
| GATGGATCTCCAGCTGGTTC+TGG | 0.267311 | 6_4:-52093898 | Msa0990490:CDS |
| AGGTCAATTTGAGCTGGTTT+TGG | 0.272216 | 6_4:-52090118 | Msa0990490:CDS |
| TTGTGGCACCACTTCCTATC+AGG | 0.276679 | 6_4:-52088223 | Msa0990490:intron |
| GAATGGCCGAAATGTATTTA+TGG | 0.277709 | 6_4:-52088336 | Msa0990490:CDS |
| ACATCATAGAAACGCTTTCT+AGG | 0.280632 | 6_4:+52093979 | None:intergenic |
| ATATTATGGGTTGATAATTC+AGG | 0.296465 | 6_4:-52094117 | Msa0990490:CDS |
| TACTTCTGCTTTACATTCAA+TGG | 0.297886 | 6_4:-52090632 | Msa0990490:CDS |
| GACTTTCTAGAGGAGTTTAT+TGG | 0.301629 | 6_4:-52087572 | Msa0990490:CDS |
| TTTACACACGTGAAACTGTT+AGG | 0.307448 | 6_4:-52090059 | Msa0990490:CDS |
| TTTGAGTTTAAATCATTTGA+TGG | 0.321281 | 6_4:-52087938 | Msa0990490:CDS |
| ATAGCAGATAAGCCTAAGTA+TGG | 0.330191 | 6_4:+52087905 | None:intergenic |
| AAGGTACACATTAGATGATC+TGG | 0.342188 | 6_4:-52088393 | Msa0990490:CDS |
| AAGTAACTTCACGAAGTATT+GGG | 0.344458 | 6_4:+52090650 | None:intergenic |
| TCTGATGAATCATCAAAGTA+TGG | 0.348059 | 6_4:-52088311 | Msa0990490:CDS |
| AAATGAAACATCAGTGTCTA+AGG | 0.359967 | 6_4:+52094146 | None:intergenic |
| ATAATTGCTGCTGGCATTGA+TGG | 0.367852 | 6_4:-52087884 | Msa0990490:CDS |
| ATTATCTTACCAACAGGTTC+AGG | 0.370199 | 6_4:+52087839 | None:intergenic |
| TGGTTTAGCATTTGTGAGTA+TGG | 0.370758 | 6_4:-52093938 | Msa0990490:CDS |
| TTCTCTTGAAGAGCGCAATA+AGG | 0.373996 | 6_4:-52090824 | Msa0990490:intron |
| GGAGTGGTGCATACATGTTC+TGG | 0.374699 | 6_4:-52088033 | Msa0990490:CDS |
| TTCATTTGTTCGTATATTAT+GGG | 0.380054 | 6_4:-52094130 | Msa0990490:CDS |
| AAAGTATGGAATATCAACTT+TGG | 0.394810 | 6_4:-52088297 | Msa0990490:CDS |
| TATGATGTTGTTACTAAGAA+TGG | 0.399525 | 6_4:-52093964 | Msa0990490:CDS |
| ACTCTTCTTAAGGCCTCTCT+TGG | 0.399840 | 6_4:+52093636 | None:intergenic |
| CAGATGCCATAAATACATTT+CGG | 0.416064 | 6_4:+52088330 | None:intergenic |
| ACATTAGATGATCTGGGTTC+TGG | 0.424644 | 6_4:-52088386 | Msa0990490:CDS |
| AAGTATGGAATATCAACTTT+GGG | 0.428984 | 6_4:-52088296 | Msa0990490:CDS |
| AATGGGAATTCCAGTAGAAC+AGG | 0.438731 | 6_4:-52090614 | Msa0990490:intron |
| ATCTTTGGAAGCTCTTCATA+AGG | 0.440929 | 6_4:-52087597 | Msa0990490:CDS |
| ACTTCTGCTTTACATTCAAT+GGG | 0.441181 | 6_4:-52090631 | Msa0990490:CDS |
| GAAGTAACTTCACGAAGTAT+TGG | 0.442468 | 6_4:+52090649 | None:intergenic |
| ATCTACAACCTGGTCAAGCT+TGG | 0.445135 | 6_4:-52093668 | Msa0990490:CDS |
| CTACTAAAAGGATAATTCCT+TGG | 0.451512 | 6_4:-52093834 | Msa0990490:intron |
| GCCACAAAAGACAAAATAGA+AGG | 0.456760 | 6_4:+52088239 | None:intergenic |
| TGTTCTGGGGAAATGAGAAT+AGG | 0.460898 | 6_4:-52088018 | Msa0990490:CDS |
| GTTCTGGGGAAATGAGAATA+GGG | 0.462403 | 6_4:-52088017 | Msa0990490:CDS |
| CAAGTTGCTGACTGCCATAA+AGG | 0.462856 | 6_4:-52087546 | Msa0990490:CDS |
| GGTTCTGGTTTAGGTTCAGT+TGG | 0.474402 | 6_4:-52093883 | Msa0990490:CDS |
| TTGGGAAAAGAGTTTATGGC+TGG | 0.478023 | 6_4:-52088278 | Msa0990490:CDS |
| GCAAAACCATCAGGAGTTCC+AGG | 0.481545 | 6_4:+52087968 | None:intergenic |
| TCTACAACCTGGTCAAGCTT+GGG | 0.485560 | 6_4:-52093667 | Msa0990490:CDS |
| CAGCTCAATAACGGTGTATG+AGG | 0.487181 | 6_4:+52087211 | None:intergenic |
| TTGCAGTTACATGCAGAAGC+TGG | 0.487892 | 6_4:-52090144 | Msa0990490:intron |
| TCTCCTCCTGGAACTCCTGA+TGG | 0.488319 | 6_4:-52087974 | Msa0990490:CDS |
| GACATTAAGCAGCTCAATAA+CGG | 0.488426 | 6_4:+52087202 | None:intergenic |
| TTGCGAGCTTCATCTCCTCC+TGG | 0.498368 | 6_4:-52087986 | Msa0990490:CDS |
| AACTTCCAGGTATTGAATGC+AGG | 0.501261 | 6_4:-52090864 | Msa0990490:intron |
| AAATTACTCGCAAAACCATC+AGG | 0.503241 | 6_4:+52087959 | None:intergenic |
| CTCTTCTTAAGGCCTCTCTT+GGG | 0.505757 | 6_4:+52093637 | None:intergenic |
| TGGAAAAGGTCAATTTGAGC+TGG | 0.509856 | 6_4:-52090124 | Msa0990490:CDS |
| ATGCTGACGAGGAGCAGTAA+GGG | 0.511270 | 6_4:+52090686 | None:intergenic |
| AATGCTGACGAGGAGCAGTA+AGG | 0.514992 | 6_4:+52090685 | None:intergenic |
| CAATATTCCCAAGCTTGACC+AGG | 0.521090 | 6_4:+52093660 | None:intergenic |
| ACAGGGAAGGGAAAGAAGAA+TGG | 0.521401 | 6_4:-52090726 | Msa0990490:intron |
| TTACACACGTGAAACTGTTA+GGG | 0.524372 | 6_4:-52090058 | Msa0990490:CDS |
| GAGTGGTGCATACATGTTCT+GGG | 0.528128 | 6_4:-52088032 | Msa0990490:CDS |
| CTTTCACTTCCTGAACCTGT+TGG | 0.529336 | 6_4:-52087848 | Msa0990490:intron |
| GTTGTTACTAAGAATGGTGT+TGG | 0.529371 | 6_4:-52093958 | Msa0990490:CDS |
| TTATCTGCTATAATTGCTGC+TGG | 0.535019 | 6_4:-52087893 | Msa0990490:CDS |
| CATCTAAGCTTGTGGCAGAA+TGG | 0.537152 | 6_4:-52088353 | Msa0990490:CDS |
| TTACATGCAGAAGCTGGAAA+AGG | 0.542608 | 6_4:-52090138 | Msa0990490:CDS |
| ATAGATAGCAGAAACCTGAT+AGG | 0.545554 | 6_4:+52088209 | None:intergenic |
| TATGCACCACTCCATGTGTT+CGG | 0.546842 | 6_4:+52088043 | None:intergenic |
| GAACCTAAACCAGAACCAGC+TGG | 0.546983 | 6_4:+52093889 | None:intergenic |
| AGGTACACATTAGATGATCT+GGG | 0.547418 | 6_4:-52088392 | Msa0990490:CDS |
| TCTCAAAGATGAATTTGACT+TGG | 0.550516 | 6_4:-52093604 | Msa0990490:intron |
| ATCGATTGCAGCCGAACACA+TGG | 0.554491 | 6_4:-52088054 | Msa0990490:CDS |
| AGCAGAAACCTGATAGGAAG+TGG | 0.556077 | 6_4:+52088215 | None:intergenic |
| GATTGAGTTGAGTAAAGCAG+TGG | 0.575460 | 6_4:-52094190 | Msa0990490:CDS |
| GGTTCTGCAAACCCATACTT+AGG | 0.580085 | 6_4:-52087917 | Msa0990490:CDS |
| AGGGCAATTGCTAGAAAACA+TGG | 0.595938 | 6_4:-52090039 | Msa0990490:CDS |
| TCATAAGGCTGACTTTCTAG+AGG | 0.604644 | 6_4:-52087582 | Msa0990490:CDS |
| TAGCAGATAAGCCTAAGTAT+GGG | 0.608694 | 6_4:+52087906 | None:intergenic |
| AGTAACTTCACGAAGTATTG+GGG | 0.615657 | 6_4:+52090651 | None:intergenic |
| GCCATGTTCATCTAAGCTTG+TGG | 0.618097 | 6_4:-52088361 | Msa0990490:CDS |
| GGAGGAGATGAAGCTCGCAA+TGG | 0.620695 | 6_4:+52087989 | None:intergenic |
| TGCCATAAAGGCGATTCGAA+AGG | 0.620766 | 6_4:-52087534 | Msa0990490:intron |
| AGCAACATCAAATGCTGACG+AGG | 0.632071 | 6_4:+52090675 | None:intergenic |
| TTGGGAATATTGCCCAAGAG+AGG | 0.634167 | 6_4:-52093649 | Msa0990490:CDS |
| TGCTGACGAGGAGCAGTAAG+GGG | 0.638683 | 6_4:+52090687 | None:intergenic |
| AGTGGAAGATGTTGAACTTG+TGG | 0.645822 | 6_4:-52094172 | Msa0990490:CDS |
| TGATCACTACTCGAAGAACA+AGG | 0.646466 | 6_4:-52087247 | Msa0990490:CDS |
| GCCACAAGCTTAGATGAACA+TGG | 0.656206 | 6_4:+52088360 | None:intergenic |
| TTGCAGCCGAACACATGGAG+TGG | 0.664649 | 6_4:-52088049 | Msa0990490:CDS |
| CTGGCATTGATGGTCTACGT+AGG | 0.670844 | 6_4:-52087874 | Msa0990490:CDS |
| GGTGATCTGAATCTACAACC+TGG | 0.678554 | 6_4:-52093678 | Msa0990490:CDS |
| CTGGGGAAATGAGAATAGGG+AGG | 0.701363 | 6_4:-52088014 | Msa0990490:CDS |
| AAACCATCAGGAGTTCCAGG+AGG | 0.759604 | 6_4:+52087971 | None:intergenic |
| AGTGGTGCATACATGTTCTG+GGG | 0.763007 | 6_4:-52088031 | Msa0990490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAAATTATAATTTTTTT+AGG | + | chr6_4:52089080-52089099 | None:intergenic | 0.0% |
| !!! | TTTATAAATTTTAATTTTTT+TGG | + | chr6_4:52089744-52089763 | None:intergenic | 0.0% |
| !!! | TTATTATTTTTTATTTTTTT+TGG | - | chr6_4:52091913-52091932 | Msa0990490:intron | 0.0% |
| !! | TAATTGGTTAATAAATTTAT+TGG | + | chr6_4:52088132-52088151 | None:intergenic | 10.0% |
| !!! | AGATTACTTTTATTTTATTA+CGG | + | chr6_4:52088346-52088365 | None:intergenic | 10.0% |
| !!! | AATTTTTTGTAATTTTATTG+GGG | + | chr6_4:52088963-52088982 | None:intergenic | 10.0% |
| !!! | GTAATTTTTTGTAATTTTAT+TGG | + | chr6_4:52088965-52088984 | None:intergenic | 10.0% |
| !!! | ATAATTTTGAAATATTTTAG+GGG | + | chr6_4:52088995-52089014 | None:intergenic | 10.0% |
| !!! | AATTTTAGAAATTTACAAAT+TGG | - | chr6_4:52089028-52089047 | Msa0990490:intron | 10.0% |
| !! | AAATTTGAAAATTGAAATTA+GGG | + | chr6_4:52089055-52089074 | None:intergenic | 10.0% |
| !!! | AATTTTTGAAAAAAAATTGA+GGG | + | chr6_4:52089655-52089674 | None:intergenic | 10.0% |
| !!! | TAATTTTTGAAAAAAAATTG+AGG | + | chr6_4:52089656-52089675 | None:intergenic | 10.0% |
| !!! | TTTATTCTAAAGATTTAAAA+TGG | + | chr6_4:52091110-52091129 | None:intergenic | 10.0% |
| !!! | ATTTTCATTTCAATTTTTTT+TGG | - | chr6_4:52091639-52091658 | Msa0990490:intron | 10.0% |
| !! | ATATTTATATACTTTGAATT+TGG | + | chr6_4:52091716-52091735 | None:intergenic | 10.0% |
| !!! | GCAAATTTTTAAAATATTAA+TGG | - | chr6_4:52091775-52091794 | Msa0990490:intron | 10.0% |
| !! | TGTAATTAATCAAAATTTCT+AGG | + | chr6_4:52088064-52088083 | None:intergenic | 15.0% |
| !! | GATTAATTATGTTCAATAAT+TGG | + | chr6_4:52088148-52088167 | None:intergenic | 15.0% |
| !! | TCTTAGTTTATCAAAATAAA+TGG | + | chr6_4:52088588-52088607 | None:intergenic | 15.0% |
| !!! | ATTTATTTTGATAAACTAAG+AGG | - | chr6_4:52088587-52088606 | Msa0990490:intron | 15.0% |
| !!! | TTGTAAATTTCTAAAATTGA+GGG | + | chr6_4:52089026-52089045 | None:intergenic | 15.0% |
| !!! | TTTGTAAATTTCTAAAATTG+AGG | + | chr6_4:52089027-52089046 | None:intergenic | 15.0% |
| !! | AATTTGAAAATTGAAATTAG+GGG | + | chr6_4:52089054-52089073 | None:intergenic | 15.0% |
| !! | CAAATTTGAAAATTGAAATT+AGG | + | chr6_4:52089056-52089075 | None:intergenic | 15.0% |
| !!! | CTAATTTCAATTTTCAAATT+TGG | - | chr6_4:52089054-52089073 | Msa0990490:intron | 15.0% |
| !!! | TTTAAAGAATTTAGAATTCT+AGG | + | chr6_4:52089199-52089218 | None:intergenic | 15.0% |
| !!! | AATTTGAAGAATTTTCAAAA+TGG | - | chr6_4:52088802-52088821 | Msa0990490:intron | 15.0% |
| !!! | GATTTTTAGGAAATTTATTT+GGG | + | chr6_4:52089622-52089641 | None:intergenic | 15.0% |
| !!! | ATTTTTGAAAAAAAATTGAG+GGG | + | chr6_4:52089654-52089673 | None:intergenic | 15.0% |
| !!! | TAAAATTCAAAAATTTTGAG+AGG | + | chr6_4:52089687-52089706 | None:intergenic | 15.0% |
| !! | AAATATGAAAATTGGAATTA+GGG | + | chr6_4:52089719-52089738 | None:intergenic | 15.0% |
| !!! | ATGAATTTTGAACAATATTT+GGG | + | chr6_4:52089960-52089979 | None:intergenic | 15.0% |
| !!! | TATGAATTTTGAACAATATT+TGG | + | chr6_4:52089961-52089980 | None:intergenic | 15.0% |
| !!! | ATGAATTTTGAACAATATTT+GGG | + | chr6_4:52089960-52089979 | None:intergenic | 15.0% |
| !!! | TATGAATTTTGAACAATATT+TGG | + | chr6_4:52089961-52089980 | None:intergenic | 15.0% |
| !!! | ATGAATTTTGAACAATATTT+GGG | + | chr6_4:52089960-52089979 | None:intergenic | 15.0% |
| !!! | TATGAATTTTGAACAATATT+TGG | + | chr6_4:52089961-52089980 | None:intergenic | 15.0% |
| !!! | TATATATTTTATACTTGCAA+TGG | + | chr6_4:52091447-52091466 | None:intergenic | 15.0% |
| !!! | TGAAAAAGTTTTTAAATATG+TGG | - | chr6_4:52091483-52091502 | Msa0990490:intron | 15.0% |
| !!! | TTGTGAATTTTGAAAAATAT+AGG | - | chr6_4:52091805-52091824 | Msa0990490:intron | 15.0% |
| !!! | TGTGAATTTTGAAAAATATA+GGG | - | chr6_4:52091806-52091825 | Msa0990490:intron | 15.0% |
| !!! | TGATGTAATGTAATTTTATA+GGG | + | chr6_4:52092516-52092535 | None:intergenic | 15.0% |
| !!! | TTGATGTAATGTAATTTTAT+AGG | + | chr6_4:52092517-52092536 | None:intergenic | 15.0% |
| !!! | ATTTAATAATTTCAAGTGTT+TGG | - | chr6_4:52092698-52092717 | Msa0990490:intron | 15.0% |
| !! | ATAAATTACTTATTGATCTT+TGG | - | chr6_4:52092721-52092740 | Msa0990490:intron | 15.0% |
| !! | AAAAAACAAGCATATAATTT+AGG | + | chr6_4:52093243-52093262 | None:intergenic | 15.0% |
| !!! | AATATTTTTTACAAAAGCAT+AGG | + | chr6_4:52093706-52093725 | None:intergenic | 15.0% |
| !! | GTTTCATTAAAAGATAATAA+GGG | + | chr6_4:52094083-52094102 | None:intergenic | 15.0% |
| !! | AGTTTCATTAAAAGATAATA+AGG | + | chr6_4:52094084-52094103 | None:intergenic | 15.0% |
| !! | TTTCATTTGTTCGTATATTA+TGG | - | chr6_4:52087282-52087301 | Msa0990490:intron | 20.0% |
| !! | TTCATTTGTTCGTATATTAT+GGG | - | chr6_4:52087283-52087302 | Msa0990490:intron | 20.0% |
| !! | AACTATAAAGTGATAAACAA+GGG | + | chr6_4:52087345-52087364 | None:intergenic | 20.0% |
| !! | AAACTATAAAGTGATAAACA+AGG | + | chr6_4:52087346-52087365 | None:intergenic | 20.0% |
| !!! | CTATATTAGTATATGTTTTG+AGG | - | chr6_4:52087384-52087403 | Msa0990490:intron | 20.0% |
| !! | CAGAATTAAAAGTAATTGAA+GGG | + | chr6_4:52087614-52087633 | None:intergenic | 20.0% |
| !! | TCAGAATTAAAAGTAATTGA+AGG | + | chr6_4:52087615-52087634 | None:intergenic | 20.0% |
| !!! | AAATTCATCTTTGAGAATTT+TGG | + | chr6_4:52087805-52087824 | None:intergenic | 20.0% |
| !! | CAATTGTTAATTACTTTCAA+TGG | - | chr6_4:52087930-52087949 | Msa0990490:CDS | 20.0% |
| !!! | AACTTTATTTCCTTCTAATT+TGG | - | chr6_4:52087998-52088017 | Msa0990490:CDS | 20.0% |
| !!! | TAGTTTTTGTAAATTTGTGA+GGG | + | chr6_4:52088219-52088238 | None:intergenic | 20.0% |
| !!! | TTAGTTTTTGTAAATTTGTG+AGG | + | chr6_4:52088220-52088239 | None:intergenic | 20.0% |
| !! | TATAAAGACACAAAAAATCT+TGG | - | chr6_4:52088469-52088488 | Msa0990490:intron | 20.0% |
| !! | ACCCATTTAATTAAAATATC+CGG | - | chr6_4:52088522-52088541 | Msa0990490:intron | 20.0% |
| !!! | ACCGGATATTTTAATTAAAT+GGG | + | chr6_4:52088526-52088545 | None:intergenic | 20.0% |
| !!! | TACCGGATATTTTAATTAAA+TGG | + | chr6_4:52088527-52088546 | None:intergenic | 20.0% |
| !!! | TTGAAGAATTTTCAAAATGA+TGG | - | chr6_4:52088805-52088824 | Msa0990490:intron | 20.0% |
| !!! | TGTAAATTTCTAAAATTGAG+GGG | + | chr6_4:52089025-52089044 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAAACAACTTTTT+AGG | + | chr6_4:52089408-52089427 | None:intergenic | 20.0% |
| !!! | TTTCTTGAAATTTTGCATTT+TGG | - | chr6_4:52089566-52089585 | Msa0990490:intron | 20.0% |
| !!! | CGATTTTTAGGAAATTTATT+TGG | + | chr6_4:52089623-52089642 | None:intergenic | 20.0% |
| !! | AATATGAAAATTGGAATTAG+GGG | + | chr6_4:52089718-52089737 | None:intergenic | 20.0% |
| !! | CAAATATGAAAATTGGAATT+AGG | + | chr6_4:52089720-52089739 | None:intergenic | 20.0% |
| !!! | TTTTGGTCAAATATGAAAAT+TGG | + | chr6_4:52089727-52089746 | None:intergenic | 20.0% |
| !!! | TGAATTTTGAACAATATTTG+GGG | + | chr6_4:52089959-52089978 | None:intergenic | 20.0% |
| !!! | TGAATTTTGAACAATATTTG+GGG | + | chr6_4:52089959-52089978 | None:intergenic | 20.0% |
| !!! | TGAATTTTGAACAATATTTG+GGG | + | chr6_4:52089959-52089978 | None:intergenic | 20.0% |
| !!! | TAGATTGTTATTTCGAAAAT+TGG | - | chr6_4:52090483-52090502 | Msa0990490:intron | 20.0% |
| !! | GAAAAATGTAAATGTTTGTT+TGG | + | chr6_4:52091156-52091175 | None:intergenic | 20.0% |
| !!! | CAGTTTCTTAGTTTTTAATT+AGG | - | chr6_4:52091941-52091960 | Msa0990490:intron | 20.0% |
| !! | TATGGTTTCGATTATAAATT+TGG | + | chr6_4:52092033-52092052 | None:intergenic | 20.0% |
| !! | ATAGCTCACTATATTTATTT+AGG | - | chr6_4:52092320-52092339 | Msa0990490:intron | 20.0% |
| !!! | ATTGATCTTTGGAAATAATA+CGG | - | chr6_4:52092732-52092751 | Msa0990490:intron | 20.0% |
| !!! | ATTTTTTTTTTCCAACATCA+CGG | - | chr6_4:52092886-52092905 | Msa0990490:intron | 20.0% |
| !! | ATGTGAGATTGATAAAATTA+CGG | + | chr6_4:52092919-52092938 | None:intergenic | 20.0% |
| !!! | TTTGAGTTTAAATCATTTGA+TGG | - | chr6_4:52093475-52093494 | Msa0990490:intron | 20.0% |
| !! | GTCATCATAAAATAAAACTT+AGG | + | chr6_4:52093963-52093982 | None:intergenic | 20.0% |
| !! | CAAAATTAAAATATTAGTCG+TGG | - | chr6_4:52093987-52094006 | Msa0990490:CDS | 20.0% |
| !!! | ATATTATGGGTTGATAATTC+AGG | - | chr6_4:52087296-52087315 | Msa0990490:intron | 25.0% |
| ! | TATGATGTTGTTACTAAGAA+TGG | - | chr6_4:52087449-52087468 | Msa0990490:intron | 25.0% |
| !! | ATCCTTTTAGTAGATAAATC+AGG | + | chr6_4:52087572-52087591 | None:intergenic | 25.0% |
| ! | CAACTTTGTTCCATAATTAT+AGG | - | chr6_4:52087688-52087707 | Msa0990490:intron | 25.0% |
| !! | AAGCAAGATGAAATTGTTTT+AGG | - | chr6_4:52087714-52087733 | Msa0990490:intron | 25.0% |
| ! | TAGAAGGAAATAAAGTTATG+TGG | + | chr6_4:52087995-52088014 | None:intergenic | 25.0% |
| ! | ATCCAAATTTGTGTTAATGT+TGG | - | chr6_4:52088083-52088102 | Msa0990490:intron | 25.0% |
| !! | AGTTTTTGTAAATTTGTGAG+GGG | + | chr6_4:52088218-52088237 | None:intergenic | 25.0% |
| !! | CATTTCTCAATACTTTTGTT+TGG | + | chr6_4:52089147-52089166 | None:intergenic | 25.0% |
| !! | TTGAAGAATTTTCAAAATGG+TGG | - | chr6_4:52089310-52089329 | Msa0990490:intron | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | + | chr6_4:52089500-52089519 | None:intergenic | 25.0% |
| ! | CATTGAATAACTAATGTATG+TGG | + | chr6_4:52089465-52089484 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | - | chr6_4:52089500-52089519 | Msa0990490:intron | 25.0% |
| ! | ATATGAAAATTGGAATTAGG+GGG | + | chr6_4:52089717-52089736 | None:intergenic | 25.0% |
| ! | AAAATCAAAATTTGTGTGCT+TGG | + | chr6_4:52089894-52089913 | None:intergenic | 25.0% |
| ! | AAGGACAAAGAAATGAAAAT+GGG | + | chr6_4:52089921-52089940 | None:intergenic | 25.0% |
| ! | GCTATTTGAAAAACAAAACT+TGG | + | chr6_4:52090509-52090528 | None:intergenic | 25.0% |
| !!! | TCTTCATGTTTTTGAGTAAT+TGG | + | chr6_4:52090656-52090675 | None:intergenic | 25.0% |
| !! | TTAATTTTTACCTGTTCTAC+TGG | + | chr6_4:52090812-52090831 | None:intergenic | 25.0% |
| ! | AGTAGAACAGGTAAAAATTA+AGG | - | chr6_4:52090811-52090830 | Msa0990490:intron | 25.0% |
| !!! | AAATTAAGGAGTTTTGAACT+TGG | - | chr6_4:52090825-52090844 | Msa0990490:CDS | 25.0% |
| ! | AATAAATTCTGCATCTAGAA+TGG | + | chr6_4:52091057-52091076 | None:intergenic | 25.0% |
| !!! | AAAATGGATTTTGACATGTT+TGG | + | chr6_4:52091094-52091113 | None:intergenic | 25.0% |
| ! | TATGCAAAATTTGAAAATCG+AGG | - | chr6_4:52091743-52091762 | Msa0990490:intron | 25.0% |
| ! | ATGCAAAATTTGAAAATCGA+GGG | - | chr6_4:52091744-52091763 | Msa0990490:intron | 25.0% |
| ! | CAATACAATGAATGTAAAGT+TGG | + | chr6_4:52091865-52091884 | None:intergenic | 25.0% |
| !! | ATTCATTGTATTGACAATGA+AGG | - | chr6_4:52091872-52091891 | Msa0990490:intron | 25.0% |
| ! | TTACAAGAATTATGTGACTA+TGG | + | chr6_4:52092051-52092070 | None:intergenic | 25.0% |
| ! | TCACATAATTCTTGTAATCA+AGG | - | chr6_4:52092054-52092073 | Msa0990490:intron | 25.0% |
| ! | CACATAATTCTTGTAATCAA+GGG | - | chr6_4:52092055-52092074 | Msa0990490:intron | 25.0% |
| !! | TACATCAAAACATTCCTTTT+TGG | - | chr6_4:52092529-52092548 | Msa0990490:intron | 25.0% |
| ! | GAATATATAAAGTGCATGTT+TGG | - | chr6_4:52092809-52092828 | Msa0990490:intron | 25.0% |
| !! | CAGTGACTTACATTAATTTT+GGG | - | chr6_4:52092856-52092875 | Msa0990490:intron | 25.0% |
| !!! | GTGTTTTGTTGCAATATTAA+AGG | - | chr6_4:52093001-52093020 | Msa0990490:intron | 25.0% |
| ! | AAAGTATGGAATATCAACTT+TGG | - | chr6_4:52093116-52093135 | Msa0990490:intron | 25.0% |
| ! | AAGTATGGAATATCAACTTT+GGG | - | chr6_4:52093117-52093136 | Msa0990490:intron | 25.0% |
| ! | ATATAATTTAGGAGAATGAG+TGG | + | chr6_4:52093232-52093251 | None:intergenic | 25.0% |
| ! | GTTTATATTATCTTACCAAC+AGG | + | chr6_4:52093583-52093602 | None:intergenic | 25.0% |
| ! | CAATCATACAAATAAGCAAA+GGG | + | chr6_4:52093667-52093686 | None:intergenic | 25.0% |
| ! | ACAATCATACAAATAAGCAA+AGG | + | chr6_4:52093668-52093687 | None:intergenic | 25.0% |
| !! | ATGATTGTTGCACAATATTT+TGG | - | chr6_4:52093680-52093699 | Msa0990490:CDS | 25.0% |
| !!! | AAAGATTCTGAAAGTGATTT+TGG | + | chr6_4:52093802-52093821 | None:intergenic | 25.0% |
| ! | AAAATCACTTTCAGAATCTT+TGG | - | chr6_4:52093801-52093820 | Msa0990490:intron | 25.0% |
| ! | CATTAAAAGATAATAAGGGA+TGG | + | chr6_4:52094079-52094098 | None:intergenic | 25.0% |
| AAATGAAACATCAGTGTCTA+AGG | + | chr6_4:52087270-52087289 | None:intergenic | 30.0% | |
| !!! | TATGGTGATGACTTCTTTTT+TGG | - | chr6_4:52087493-52087512 | Msa0990490:intron | 30.0% |
| CACCTGATTTATCTACTAAA+AGG | - | chr6_4:52087567-52087586 | Msa0990490:CDS | 30.0% | |
| CTACTAAAAGGATAATTCCT+TGG | - | chr6_4:52087579-52087598 | Msa0990490:CDS | 30.0% | |
| !! | AATTTTGGAGACTCTTCTTA+AGG | + | chr6_4:52087790-52087809 | None:intergenic | 30.0% |
| TCTCAAAGATGAATTTGACT+TGG | - | chr6_4:52087809-52087828 | Msa0990490:intron | 30.0% | |
| !! | AAGATGAATTTGACTTGGTA+TGG | - | chr6_4:52087814-52087833 | Msa0990490:intron | 30.0% |
| ATTTCCTTCTAATTTGGATG+TGG | - | chr6_4:52088004-52088023 | Msa0990490:CDS | 30.0% | |
| TTTACCACATCCAAATTAGA+AGG | + | chr6_4:52088011-52088030 | None:intergenic | 30.0% | |
| CACCAACATTAACACAAATT+TGG | + | chr6_4:52088088-52088107 | None:intergenic | 30.0% | |
| CAAATTTGTGTTAATGTTGG+TGG | - | chr6_4:52088086-52088105 | Msa0990490:intron | 30.0% | |
| AAAACTAAAGCAACTAACAC+TGG | - | chr6_4:52088232-52088251 | Msa0990490:CDS | 30.0% | |
| TAGACACAAAAAAGAGATAC+CGG | + | chr6_4:52088544-52088563 | None:intergenic | 30.0% | |
| GACACCATATCTTTATGTTT+GGG | - | chr6_4:52088648-52088667 | Msa0990490:intron | 30.0% | |
| ! | GCAAACATTAAAAGTGTGTT+TGG | - | chr6_4:52088719-52088738 | Msa0990490:intron | 30.0% |
| ! | ATTAAAAGTGTGTTTGGATG+AGG | - | chr6_4:52088725-52088744 | Msa0990490:intron | 30.0% |
| ! | TTAAAAGTGTGTTTGGATGA+GGG | - | chr6_4:52088726-52088745 | Msa0990490:intron | 30.0% |
| GATGGAATTGAAATACTTTG+AGG | - | chr6_4:52088757-52088776 | Msa0990490:intron | 30.0% | |
| TTGAGGTGAATTCTATTGTT+TGG | - | chr6_4:52088774-52088793 | Msa0990490:intron | 30.0% | |
| GGGTCAATTTGTAAAATTTG+AGG | + | chr6_4:52088943-52088962 | None:intergenic | 30.0% | |
| ! | TGGGTCAATTTGCAAATTTT+GGG | + | chr6_4:52089603-52089622 | None:intergenic | 30.0% |
| ! | TTGGGTCAATTTGCAAATTT+TGG | + | chr6_4:52089604-52089623 | None:intergenic | 30.0% |
| TATGAAAATTGGAATTAGGG+GGG | + | chr6_4:52089716-52089735 | None:intergenic | 30.0% | |
| CAAGGACAAAGAAATGAAAA+TGG | + | chr6_4:52089922-52089941 | None:intergenic | 30.0% | |
| CCTATGTAATAAATCATCCT+GGG | - | chr6_4:52089987-52090006 | Msa0990490:intron | 30.0% | |
| CCTATGTAATAAATCATCCT+GGG | - | chr6_4:52089987-52090006 | Msa0990490:intron | 30.0% | |
| CAACTTTCACAAACTTATTG+CGG | + | chr6_4:52090251-52090270 | None:intergenic | 30.0% | |
| TAATGTTTGTCGGTATTTCA+TGG | - | chr6_4:52090283-52090302 | Msa0990490:intron | 30.0% | |
| CTAAATTAGTCCACCTAAAT+TGG | - | chr6_4:52090366-52090385 | Msa0990490:intron | 30.0% | |
| ! | TCTATGTTGATAAACCCATT+TGG | + | chr6_4:52090467-52090486 | None:intergenic | 30.0% |
| !!! | ATGTTTTTGAGTAATTGGCA+TGG | + | chr6_4:52090651-52090670 | None:intergenic | 30.0% |
| ATGAAGAAAACCAACTATAC+AGG | - | chr6_4:52090669-52090688 | Msa0990490:CDS | 30.0% | |
| TGAAGAAAACCAACTATACA+GGG | - | chr6_4:52090670-52090689 | Msa0990490:CDS | 30.0% | |
| ! | AAGTAACTTCACGAAGTATT+GGG | + | chr6_4:52090766-52090785 | None:intergenic | 30.0% |
| TACTTCTGCTTTACATTCAA+TGG | - | chr6_4:52090781-52090800 | Msa0990490:intron | 30.0% | |
| ACTTCTGCTTTACATTCAAT+GGG | - | chr6_4:52090782-52090801 | Msa0990490:intron | 30.0% | |
| ! | AATCGATGATTTTGCAAGAT+TGG | - | chr6_4:52090915-52090934 | Msa0990490:intron | 30.0% |
| !!! | TGATTTTGCAAGATTGGTTT+TGG | - | chr6_4:52090921-52090940 | Msa0990490:intron | 30.0% |
| !!! | TGTTTGGTTCTACTTTTGTA+GGG | + | chr6_4:52091140-52091159 | None:intergenic | 30.0% |
| !!! | TTGTTTGGTTCTACTTTTGT+AGG | + | chr6_4:52091141-52091160 | None:intergenic | 30.0% |
| !! | AACTTTTGGGAAGGATTTTT+TGG | + | chr6_4:52091178-52091197 | None:intergenic | 30.0% |
| TTAAATATGTGGCTATGATG+TGG | - | chr6_4:52091494-52091513 | Msa0990490:intron | 30.0% | |
| !!! | GCTTTTTTGGTAAACAAAGA+TGG | - | chr6_4:52091558-52091577 | Msa0990490:intron | 30.0% |
| GAAACTTGGTAGAAGAAATT+AGG | - | chr6_4:52092276-52092295 | Msa0990490:intron | 30.0% | |
| GTATTATTACTACTACGAAC+CGG | - | chr6_4:52092342-52092361 | Msa0990490:intron | 30.0% | |
| ! | ATCAAAACATTCCTTTTTGG+TGG | - | chr6_4:52092532-52092551 | Msa0990490:intron | 30.0% |
| GACAATGCATAATAAATGCA+AGG | + | chr6_4:52092580-52092599 | None:intergenic | 30.0% | |
| ! | AATACGGATGTTGTTTACTA+TGG | - | chr6_4:52092748-52092767 | Msa0990490:intron | 30.0% |
| TTATAAGCTAAACTCCATAC+AGG | + | chr6_4:52092780-52092799 | None:intergenic | 30.0% | |
| ! | GCAGTGACTTACATTAATTT+TGG | - | chr6_4:52092855-52092874 | Msa0990490:intron | 30.0% |
| CAGATGCCATAAATACATTT+CGG | + | chr6_4:52093086-52093105 | None:intergenic | 30.0% | |
| TCTGATGAATCATCAAAGTA+TGG | - | chr6_4:52093102-52093121 | Msa0990490:intron | 30.0% | |
| ! | AACTTTGGGAAAAGAGTTTA+TGG | - | chr6_4:52093131-52093150 | Msa0990490:intron | 30.0% |
| ! | TCCTTCTATTTTGTCTTTTG+TGG | - | chr6_4:52093173-52093192 | Msa0990490:intron | 30.0% |
| !!! | TTTTTTCTTGATCCAGAAAG+TGG | - | chr6_4:52093257-52093276 | Msa0990490:intron | 30.0% |
| ! | TTTTTCTTGATCCAGAAAGT+GGG | - | chr6_4:52093258-52093277 | Msa0990490:intron | 30.0% |
| TAAAAGATAATAAGGGATGG+TGG | + | chr6_4:52094076-52094095 | None:intergenic | 30.0% | |
| AAGCTTCAAAGTTAGTTGAT+TGG | + | chr6_4:52094118-52094137 | None:intergenic | 30.0% | |
| TTGATGTGATTTATGTTTCC+AGG | - | chr6_4:52094136-52094155 | Msa0990490:CDS | 30.0% | |
| !! | GTGCTGTGAAATTTTGTTTC+AGG | - | chr6_4:52087406-52087425 | Msa0990490:intron | 35.0% |
| ACATCATAGAAACGCTTTCT+AGG | + | chr6_4:52087437-52087456 | None:intergenic | 35.0% | |
| GTTGTTACTAAGAATGGTGT+TGG | - | chr6_4:52087455-52087474 | Msa0990490:intron | 35.0% | |
| TGGTTTAGCATTTGTGAGTA+TGG | - | chr6_4:52087475-52087494 | Msa0990490:intron | 35.0% | |
| !!! | GTGATGACTTCTTTTTTGGA+TGG | - | chr6_4:52087497-52087516 | Msa0990490:intron | 35.0% |
| TTGAAGGGATTTGTATACCA+AGG | + | chr6_4:52087599-52087618 | None:intergenic | 35.0% | |
| CTTGCTTGCTCCTATAATTA+TGG | + | chr6_4:52087701-52087720 | None:intergenic | 35.0% | |
| TCGCGTTAGTTGTCTAAATT+TGG | + | chr6_4:52087879-52087898 | None:intergenic | 35.0% | |
| TCTAAGTGAAAAGAAGTCGT+TGG | - | chr6_4:52088365-52088384 | Msa0990490:CDS | 35.0% | |
| CTAAGTGAAAAGAAGTCGTT+GGG | - | chr6_4:52088366-52088385 | Msa0990490:CDS | 35.0% | |
| AAATAGAGAGGATCTTGACT+CGG | + | chr6_4:52088419-52088438 | None:intergenic | 35.0% | |
| GAAGACAATTGCAAATAGAG+AGG | + | chr6_4:52088431-52088450 | None:intergenic | 35.0% | |
| CGACACCATATCTTTATGTT+TGG | - | chr6_4:52088647-52088666 | Msa0990490:intron | 35.0% | |
| ACCTCCTATATAACTAGCAA+CGG | - | chr6_4:52088684-52088703 | Msa0990490:intron | 35.0% | |
| TTGTCCGTTGCTAGTTATAT+AGG | + | chr6_4:52088691-52088710 | None:intergenic | 35.0% | |
| ! | CACACTTTTAATGTTTGCAG+AGG | + | chr6_4:52088717-52088736 | None:intergenic | 35.0% |
| CAAGTTTGGATGAGGTAATT+GGG | + | chr6_4:52089226-52089245 | None:intergenic | 35.0% | |
| AACATTACTCCATCCAAGTT+TGG | + | chr6_4:52089240-52089259 | None:intergenic | 35.0% | |
| ! | TTGGATGGAGTAATGTTTTG+AGG | - | chr6_4:52089243-52089262 | Msa0990490:intron | 35.0% |
| GAGGAAAATCAAACACTTTG+AGG | - | chr6_4:52089262-52089281 | Msa0990490:intron | 35.0% | |
| !! | TTCTTAGCTTTTACTCCATC+CGG | + | chr6_4:52089522-52089541 | None:intergenic | 35.0% |
| !!! | GGGGTTAATTTGCGATTTTT+AGG | + | chr6_4:52089635-52089654 | None:intergenic | 35.0% |
| AAAATTTGTGTGCTTGGATG+AGG | + | chr6_4:52089888-52089907 | None:intergenic | 35.0% | |
| GCCTATGTAATAAATCATCC+TGG | - | chr6_4:52089986-52090005 | Msa0990490:intron | 35.0% | |
| CCCAGGATGATTTATTACAT+AGG | + | chr6_4:52089990-52090009 | None:intergenic | 35.0% | |
| GCCTATGTAATAAATCATCC+TGG | - | chr6_4:52089986-52090005 | Msa0990490:intron | 35.0% | |
| CCCAGGATGATTTATTACAT+AGG | + | chr6_4:52089990-52090009 | None:intergenic | 35.0% | |
| ! | TTCAGCCTATGTAATTTGTG+AGG | - | chr6_4:52090102-52090121 | Msa0990490:CDS | 35.0% |
| ! | TCAGCCTATGTAATTTGTGA+GGG | - | chr6_4:52090103-52090122 | Msa0990490:CDS | 35.0% |
| !! | TATTTAGTTTGCGTCAGCTT+TGG | + | chr6_4:52090129-52090148 | None:intergenic | 35.0% |
| ! | TAATGACCGCAGGAAATTTT+TGG | - | chr6_4:52090147-52090166 | Msa0990490:intron | 35.0% |
| AATGCATAATATGCAAGGTC+CGG | + | chr6_4:52090193-52090212 | None:intergenic | 35.0% | |
| ! | GTTGATAAACCCATTTGGAT+GGG | + | chr6_4:52090462-52090481 | None:intergenic | 35.0% |
| ! | TGTTGATAAACCCATTTGGA+TGG | + | chr6_4:52090463-52090482 | None:intergenic | 35.0% |
| !! | TTAACTTGTTGTCAACTTCC+AGG | - | chr6_4:52090536-52090555 | Msa0990490:intron | 35.0% |
| AAAACCAACTATACAGGGAA+GGG | - | chr6_4:52090675-52090694 | Msa0990490:CDS | 35.0% | |
| !! | AGTAACTTCACGAAGTATTG+GGG | + | chr6_4:52090765-52090784 | None:intergenic | 35.0% |
| GAAGTAACTTCACGAAGTAT+TGG | + | chr6_4:52090767-52090786 | None:intergenic | 35.0% | |
| TGAACTTGGTCAATTGCAAA+TGG | - | chr6_4:52090839-52090858 | Msa0990490:CDS | 35.0% | |
| AATGTATGACAATGACTGTG+TGG | - | chr6_4:52090862-52090881 | Msa0990490:intron | 35.0% | |
| TTTACACACGTGAAACTGTT+AGG | - | chr6_4:52091354-52091373 | Msa0990490:intron | 35.0% | |
| TTACACACGTGAAACTGTTA+GGG | - | chr6_4:52091355-52091374 | Msa0990490:intron | 35.0% | |
| !!! | ACAGAAGCAACATGCTTTTT+TGG | - | chr6_4:52091545-52091564 | Msa0990490:intron | 35.0% |
| ! | ACAATGCTTAAGAGTGTGTT+TGG | - | chr6_4:52091596-52091615 | Msa0990490:intron | 35.0% |
| GAGAGTTCTCATGCTAAATT+TGG | + | chr6_4:52092011-52092030 | None:intergenic | 35.0% | |
| !!! | ACCTTTTTTCAACCAATCAG+CGG | + | chr6_4:52092174-52092193 | None:intergenic | 35.0% |
| AAATGAATCACCATGAGTTG+AGG | - | chr6_4:52092215-52092234 | Msa0990490:intron | 35.0% | |
| AGAAGAACATGAACAAAGAG+TGG | - | chr6_4:52092246-52092265 | Msa0990490:intron | 35.0% | |
| AGAAGAATTCGGTACGTATA+GGG | + | chr6_4:52092388-52092407 | None:intergenic | 35.0% | |
| GATCATAGTCACATAATTCG+CGG | + | chr6_4:52092458-52092477 | None:intergenic | 35.0% | |
| CATAATAAATGCAAGGTCAG+TGG | + | chr6_4:52092573-52092592 | None:intergenic | 35.0% | |
| TACTATGGAGTTTACCTGTA+TGG | - | chr6_4:52092763-52092782 | Msa0990490:intron | 35.0% | |
| AAAGTGCATGTTTGGATGAA+CGG | - | chr6_4:52092817-52092836 | Msa0990490:intron | 35.0% | |
| !!! | TTTTTTTTCCAACATCACGG+TGG | - | chr6_4:52092889-52092908 | Msa0990490:intron | 35.0% |
| AAGGTACACATTAGATGATC+TGG | - | chr6_4:52093020-52093039 | Msa0990490:intron | 35.0% | |
| AGGTACACATTAGATGATCT+GGG | - | chr6_4:52093021-52093040 | Msa0990490:intron | 35.0% | |
| GAATGGCCGAAATGTATTTA+TGG | - | chr6_4:52093077-52093096 | Msa0990490:intron | 35.0% | |
| GCCACAAAAGACAAAATAGA+AGG | + | chr6_4:52093177-52093196 | None:intergenic | 35.0% | |
| ATAGATAGCAGAAACCTGAT+AGG | + | chr6_4:52093207-52093226 | None:intergenic | 35.0% | |
| ! | GGGACATCAAGAATTGATTT+CGG | - | chr6_4:52093278-52093297 | Msa0990490:intron | 35.0% |
| AAATTACTCGCAAAACCATC+AGG | + | chr6_4:52093457-52093476 | None:intergenic | 35.0% | |
| TAGCAGATAAGCCTAAGTAT+GGG | + | chr6_4:52093510-52093529 | None:intergenic | 35.0% | |
| ATAGCAGATAAGCCTAAGTA+TGG | + | chr6_4:52093511-52093530 | None:intergenic | 35.0% | |
| TTATCTGCTATAATTGCTGC+TGG | - | chr6_4:52093520-52093539 | Msa0990490:intron | 35.0% | |
| ATTATCTTACCAACAGGTTC+AGG | + | chr6_4:52093577-52093596 | None:intergenic | 35.0% | |
| !!! | CTCTGAAGTTTTTCTGGATT+TGG | + | chr6_4:52093775-52093794 | None:intergenic | 35.0% |
| !!! | GGTAATCTCTGAAGTTTTTC+TGG | + | chr6_4:52093781-52093800 | None:intergenic | 35.0% |
| ! | ATCTTTGGAAGCTCTTCATA+AGG | - | chr6_4:52093816-52093835 | Msa0990490:intron | 35.0% |
| ! | GACTTTCTAGAGGAGTTTAT+TGG | - | chr6_4:52093841-52093860 | Msa0990490:CDS | 35.0% |
| !! | GATTGAGTTGAGTAAAGCAG+TGG | - | chr6_4:52087223-52087242 | Msa0990490:CDS | 40.0% |
| AGTGGAAGATGTTGAACTTG+TGG | - | chr6_4:52087241-52087260 | Msa0990490:CDS | 40.0% | |
| TGTGTACCATGCTTTACTGA+TGG | - | chr6_4:52088257-52088276 | Msa0990490:CDS | 40.0% | |
| GTGTACCATGCTTTACTGAT+GGG | - | chr6_4:52088258-52088277 | Msa0990490:CDS | 40.0% | |
| TCGGTTCTCTAAGTGAAAAG+AGG | - | chr6_4:52088319-52088338 | Msa0990490:CDS | 40.0% | |
| GGATCTTAACTCCTCTTTAC+CGG | - | chr6_4:52088608-52088627 | Msa0990490:intron | 40.0% | |
| TCGTTTGTATTCAAAACCGC+CGG | + | chr6_4:52088630-52088649 | None:intergenic | 40.0% | |
| CCTGCCCAAACATAAAGATA+TGG | + | chr6_4:52088655-52088674 | None:intergenic | 40.0% | |
| CCATATCTTTATGTTTGGGC+AGG | - | chr6_4:52088652-52088671 | Msa0990490:intron | 40.0% | |
| TATCTTTATGTTTGGGCAGG+TGG | - | chr6_4:52088655-52088674 | Msa0990490:intron | 40.0% | |
| GTTGCTAGTTATATAGGAGG+TGG | + | chr6_4:52088685-52088704 | None:intergenic | 40.0% | |
| TCCGTTGCTAGTTATATAGG+AGG | + | chr6_4:52088688-52088707 | None:intergenic | 40.0% | |
| CCAAGTTTGGATGAGGTAAT+TGG | + | chr6_4:52089227-52089246 | None:intergenic | 40.0% | |
| CCAATTACCTCATCCAAACT+TGG | - | chr6_4:52089224-52089243 | Msa0990490:intron | 40.0% | |
| TTACCTCATCCAAACTTGGA+TGG | - | chr6_4:52089228-52089247 | Msa0990490:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | + | chr6_4:52089504-52089523 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | + | chr6_4:52089503-52089522 | None:intergenic | 40.0% | |
| TGCTTATAAATGTGACCGGA+TGG | - | chr6_4:52089504-52089523 | Msa0990490:intron | 40.0% | |
| !! | ACAATATTTGGGGCGTTTTG+TGG | + | chr6_4:52089949-52089968 | None:intergenic | 40.0% |
| TTGGCCCTCACAAATTACAT+AGG | + | chr6_4:52090110-52090129 | None:intergenic | 40.0% | |
| GCAAACTAAATAATGACCGC+AGG | - | chr6_4:52090137-52090156 | Msa0990490:CDS | 40.0% | |
| ATGCATAATATGCAAGGTCC+GGG | + | chr6_4:52090192-52090211 | None:intergenic | 40.0% | |
| GGGACAATGCATAATATGCA+AGG | + | chr6_4:52090198-52090217 | None:intergenic | 40.0% | |
| TGTGAAAGTTGAAAGTCCAC+TGG | - | chr6_4:52090260-52090279 | Msa0990490:intron | 40.0% | |
| ! | AGTCCACTGGTAATGTTTGT+CGG | - | chr6_4:52090273-52090292 | Msa0990490:intron | 40.0% |
| ATACCGACAAACATTACCAG+TGG | + | chr6_4:52090279-52090298 | None:intergenic | 40.0% | |
| !! | AACTTCCAGGTATTGAATGC+AGG | - | chr6_4:52090549-52090568 | Msa0990490:intron | 40.0% |
| CAAATCCTGCATTCAATACC+TGG | + | chr6_4:52090557-52090576 | None:intergenic | 40.0% | |
| ! | TTCTCTTGAAGAGCGCAATA+AGG | - | chr6_4:52090589-52090608 | Msa0990490:intron | 40.0% |
| ! | TTGAAGAGCGCAATAAGGTA+TGG | - | chr6_4:52090594-52090613 | Msa0990490:intron | 40.0% |
| GAAAACCAACTATACAGGGA+AGG | - | chr6_4:52090674-52090693 | Msa0990490:CDS | 40.0% | |
| AATGGGAATTCCAGTAGAAC+AGG | - | chr6_4:52090799-52090818 | Msa0990490:intron | 40.0% | |
| TTACATGCAGAAGCTGGAAA+AGG | - | chr6_4:52091275-52091294 | Msa0990490:intron | 40.0% | |
| TGGAAAAGGTCAATTTGAGC+TGG | - | chr6_4:52091289-52091308 | Msa0990490:intron | 40.0% | |
| !! | AGGTCAATTTGAGCTGGTTT+TGG | - | chr6_4:52091295-52091314 | Msa0990490:intron | 40.0% |
| !!! | GGTCAATTTGAGCTGGTTTT+GGG | - | chr6_4:52091296-52091315 | Msa0990490:intron | 40.0% |
| AGGGCAATTGCTAGAAAACA+TGG | - | chr6_4:52091374-52091393 | Msa0990490:intron | 40.0% | |
| ! | GCATGTTGCTTCTGTAGTTT+AGG | + | chr6_4:52091540-52091559 | None:intergenic | 40.0% |
| ! | TGCTTAAGAGTGTGTTTGGA+TGG | - | chr6_4:52091600-52091619 | Msa0990490:intron | 40.0% |
| ! | GCTTAAGAGTGTGTTTGGAT+GGG | - | chr6_4:52091601-52091620 | Msa0990490:intron | 40.0% |
| ATCAAGGGAGAATTGCGAAT+TGG | - | chr6_4:52092070-52092089 | Msa0990490:intron | 40.0% | |
| ! | ACCGCTGATTGGTTGAAAAA+AGG | - | chr6_4:52092170-52092189 | Msa0990490:intron | 40.0% |
| GAAGAATTCGGTACGTATAG+GGG | + | chr6_4:52092387-52092406 | None:intergenic | 40.0% | |
| GAGAAGAATTCGGTACGTAT+AGG | + | chr6_4:52092389-52092408 | None:intergenic | 40.0% | |
| !!! | ATTCCTTTTTGGTGGTGTCT+CGG | - | chr6_4:52092540-52092559 | Msa0990490:intron | 40.0% |
| ! | TGAGCTTAACTCAGTTGGTA+AGG | + | chr6_4:52092602-52092621 | None:intergenic | 40.0% |
| TCATGTGAGCTTAACTCAGT+TGG | + | chr6_4:52092607-52092626 | None:intergenic | 40.0% | |
| GTTCGAGTGTGTTTGGAAAA+AGG | + | chr6_4:52092644-52092663 | None:intergenic | 40.0% | |
| ! | CTAAAGTGTTCGAGTGTGTT+TGG | + | chr6_4:52092651-52092670 | None:intergenic | 40.0% |
| ACATTAGATGATCTGGGTTC+TGG | - | chr6_4:52093027-52093046 | Msa0990490:intron | 40.0% | |
| TTGGGAAAAGAGTTTATGGC+TGG | - | chr6_4:52093135-52093154 | Msa0990490:intron | 40.0% | |
| ATTCTTGATGTCCCACTTTC+TGG | + | chr6_4:52093272-52093291 | None:intergenic | 40.0% | |
| !! | TGTTCTGGGGAAATGAGAAT+AGG | - | chr6_4:52093395-52093414 | Msa0990490:intron | 40.0% |
| !! | GTTCTGGGGAAATGAGAATA+GGG | - | chr6_4:52093396-52093415 | Msa0990490:intron | 40.0% |
| ! | ATAATTGCTGCTGGCATTGA+TGG | - | chr6_4:52093529-52093548 | Msa0990490:intron | 40.0% |
| ! | TCATAAGGCTGACTTTCTAG+AGG | - | chr6_4:52093831-52093850 | Msa0990490:intron | 40.0% |
| TACCTTTCGAATCGCCTTTA+TGG | + | chr6_4:52093884-52093903 | None:intergenic | 40.0% | |
| ACGACTGATATTTGTGACTG+TGG | + | chr6_4:52093915-52093934 | None:intergenic | 40.0% | |
| CAGTCACAAATATCAGTCGT+AGG | - | chr6_4:52093915-52093934 | Msa0990490:CDS | 40.0% | |
| AGTAGTGATCAATTTCAGCC+TGG | + | chr6_4:52094157-52094176 | None:intergenic | 40.0% | |
| TGATCACTACTCGAAGAACA+AGG | - | chr6_4:52094166-52094185 | Msa0990490:CDS | 40.0% | |
| ! | TTTTTGGATGGATCTCCAGC+TGG | - | chr6_4:52087509-52087528 | Msa0990490:intron | 45.0% |
| !! | GGTTCTGGTTTAGGTTCAGT+TGG | - | chr6_4:52087530-52087549 | Msa0990490:intron | 45.0% |
| GGTGATCTGAATCTACAACC+TGG | - | chr6_4:52087735-52087754 | Msa0990490:intron | 45.0% | |
| ATCTACAACCTGGTCAAGCT+TGG | - | chr6_4:52087745-52087764 | Msa0990490:intron | 45.0% | |
| TCTACAACCTGGTCAAGCTT+GGG | - | chr6_4:52087746-52087765 | Msa0990490:intron | 45.0% | |
| CAATATTCCCAAGCTTGACC+AGG | + | chr6_4:52087756-52087775 | None:intergenic | 45.0% | |
| TTGGGAATATTGCCCAAGAG+AGG | - | chr6_4:52087764-52087783 | Msa0990490:intron | 45.0% | |
| CTCTTCTTAAGGCCTCTCTT+GGG | + | chr6_4:52087779-52087798 | None:intergenic | 45.0% | |
| ACTCTTCTTAAGGCCTCTCT+TGG | + | chr6_4:52087780-52087799 | None:intergenic | 45.0% | |
| GAAGTCGTTGGGAACATTTG+CGG | - | chr6_4:52088377-52088396 | Msa0990490:CDS | 45.0% | |
| !! | AGGATCTTGACTCGGTAAAG+AGG | + | chr6_4:52088411-52088430 | None:intergenic | 45.0% |
| TCTTAACTCCTCTTTACCGG+CGG | - | chr6_4:52088611-52088630 | Msa0990490:intron | 45.0% | |
| ATTCAAAACCGCCGGTAAAG+AGG | + | chr6_4:52088622-52088641 | None:intergenic | 45.0% | |
| ! | TGGATGAGGGAACGTTTTGA+TGG | - | chr6_4:52088739-52088758 | Msa0990490:intron | 45.0% |
| ACTCCATCCAAGTTTGGATG+AGG | + | chr6_4:52089234-52089253 | None:intergenic | 45.0% | |
| GTGTGCTTGGATGAGGTAAT+TGG | + | chr6_4:52089881-52089900 | None:intergenic | 45.0% | |
| !! | ATATTTGGGGCGTTTTGTGG+TGG | + | chr6_4:52089946-52089965 | None:intergenic | 45.0% |
| !! | AATATTTGGGGCGTTTTCCC+AGG | + | chr6_4:52090007-52090026 | None:intergenic | 45.0% |
| !! | AATATTTGGGGCGTTTTCCC+AGG | + | chr6_4:52090007-52090026 | None:intergenic | 45.0% |
| !! | TGACCGCAGGAAATTTTTGG+TGG | - | chr6_4:52090150-52090169 | Msa0990490:intron | 45.0% |
| CCACCACCAAAAATTTCCTG+CGG | + | chr6_4:52090156-52090175 | None:intergenic | 45.0% | |
| !!! | AGGAAATTTTTGGTGGTGGC+CGG | - | chr6_4:52090157-52090176 | Msa0990490:intron | 45.0% |
| TGCATAATATGCAAGGTCCG+GGG | + | chr6_4:52090191-52090210 | None:intergenic | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+GGG | + | chr6_4:52090218-52090237 | None:intergenic | 45.0% |
| TAGTCCACCTAAATTGGCAC+CGG | - | chr6_4:52090372-52090391 | Msa0990490:intron | 45.0% | |
| ! | ATTCTCTCCGGTGCCAATTT+AGG | + | chr6_4:52090382-52090401 | None:intergenic | 45.0% |
| !! | ATGGTATTGGCTTGAGACCT+GGG | + | chr6_4:52090435-52090454 | None:intergenic | 45.0% |
| !! | AATGGTATTGGCTTGAGACC+TGG | + | chr6_4:52090436-52090455 | None:intergenic | 45.0% |
| GGTCTCAAGCCAATACCATT+AGG | - | chr6_4:52090436-52090455 | Msa0990490:intron | 45.0% | |
| TTGGATGGGCCTAATGGTAT+TGG | + | chr6_4:52090448-52090467 | None:intergenic | 45.0% | |
| TACCATTAGGCCCATCCAAA+TGG | - | chr6_4:52090449-52090468 | Msa0990490:intron | 45.0% | |
| ACCATTAGGCCCATCCAAAT+GGG | - | chr6_4:52090450-52090469 | Msa0990490:intron | 45.0% | |
| CTTTCCCTTCCCTGTATAGT+TGG | + | chr6_4:52090682-52090701 | None:intergenic | 45.0% | |
| ACAGGGAAGGGAAAGAAGAA+TGG | - | chr6_4:52090687-52090706 | Msa0990490:CDS | 45.0% | |
| AGCAACATCAAATGCTGACG+AGG | + | chr6_4:52090741-52090760 | None:intergenic | 45.0% | |
| !! | ACAAGGGACAACTTTTGGGA+AGG | + | chr6_4:52091187-52091206 | None:intergenic | 45.0% |
| TTCCCAAAAGTTGTCCCTTG+TGG | - | chr6_4:52091186-52091205 | Msa0990490:intron | 45.0% | |
| TTGCAGTTACATGCAGAAGC+TGG | - | chr6_4:52091269-52091288 | Msa0990490:intron | 45.0% | |
| !!! | TGAGCTGGTTTTGGGACATA+TGG | - | chr6_4:52091304-52091323 | Msa0990490:intron | 45.0% |
| TCCAAAGTACGTACCAAGTG+TGG | - | chr6_4:52091415-52091434 | Msa0990490:intron | 45.0% | |
| GCAATGGATATTGCCACACT+TGG | + | chr6_4:52091431-52091450 | None:intergenic | 45.0% | |
| !! | TGGTACGTGAGTACCGAATT+CGG | - | chr6_4:52092090-52092109 | Msa0990490:intron | 45.0% |
| ! | AGTACCGAATTCGGGTACTT+CGG | - | chr6_4:52092099-52092118 | Msa0990490:intron | 45.0% |
| TAACCATGCTTTGGTACGCT+TGG | + | chr6_4:52092151-52092170 | None:intergenic | 45.0% | |
| AATCAGCGGTAACCATGCTT+TGG | + | chr6_4:52092160-52092179 | None:intergenic | 45.0% | |
| AAAGCATGGTTACCGCTGAT+TGG | - | chr6_4:52092159-52092178 | Msa0990490:intron | 45.0% | |
| AGAGTGGAGAGTGAGAAACT+TGG | - | chr6_4:52092262-52092281 | Msa0990490:intron | 45.0% | |
| ! | CGTATAGGGGTATACAGCTT+CGG | + | chr6_4:52092374-52092393 | None:intergenic | 45.0% |
| TACGCGACAGGAGAAGAATT+CGG | + | chr6_4:52092399-52092418 | None:intergenic | 45.0% | |
| ACATAATTCGCGGTTCGTTC+CGG | + | chr6_4:52092448-52092467 | None:intergenic | 45.0% | |
| !!! | TTCCTTTTTGGTGGTGTCTC+GGG | - | chr6_4:52092541-52092560 | Msa0990490:intron | 45.0% |
| GCCATGTTCATCTAAGCTTG+TGG | - | chr6_4:52093052-52093071 | Msa0990490:intron | 45.0% | |
| GCCACAAGCTTAGATGAACA+TGG | + | chr6_4:52093056-52093075 | None:intergenic | 45.0% | |
| CATCTAAGCTTGTGGCAGAA+TGG | - | chr6_4:52093060-52093079 | Msa0990490:intron | 45.0% | |
| AGCAGAAACCTGATAGGAAG+TGG | + | chr6_4:52093201-52093220 | None:intergenic | 45.0% | |
| TATGCACCACTCCATGTGTT+CGG | + | chr6_4:52093373-52093392 | None:intergenic | 45.0% | |
| GAGTGGTGCATACATGTTCT+GGG | - | chr6_4:52093381-52093400 | Msa0990490:intron | 45.0% | |
| AGTGGTGCATACATGTTCTG+GGG | - | chr6_4:52093382-52093401 | Msa0990490:intron | 45.0% | |
| GGTTCTGCAAACCCATACTT+AGG | - | chr6_4:52093496-52093515 | Msa0990490:intron | 45.0% | |
| CTTTCACTTCCTGAACCTGT+TGG | - | chr6_4:52093565-52093584 | Msa0990490:intron | 45.0% | |
| ! | CAAGTTGCTGACTGCCATAA+AGG | - | chr6_4:52093867-52093886 | Msa0990490:CDS | 45.0% |
| TGCCATAAAGGCGATTCGAA+AGG | - | chr6_4:52093879-52093898 | Msa0990490:CDS | 45.0% | |
| !!! | TAATTTTTTGTAATTTTATT+GGG | + | chr6_4:52088964-52088983 | None:intergenic | 5.0% |
| !!! | TATAATTTTGAAATATTTTA+GGG | + | chr6_4:52088996-52089015 | None:intergenic | 5.0% |
| !!! | TTATAATTTTGAAATATTTT+AGG | + | chr6_4:52088997-52089016 | None:intergenic | 5.0% |
| !!! | CAAATTTTTAAAATATTAAT+GGG | - | chr6_4:52091776-52091795 | Msa0990490:intron | 5.0% |
| !! | TCTCCAGCTGGTTCTGGTTT+AGG | - | chr6_4:52087521-52087540 | Msa0990490:intron | 50.0% |
| GAACCTAAACCAGAACCAGC+TGG | + | chr6_4:52087527-52087546 | None:intergenic | 50.0% | |
| ACTTGGTATGGCGCACAACT+TGG | - | chr6_4:52087826-52087845 | Msa0990490:intron | 50.0% | |
| CGTTGCCCATCAGTAAAGCA+TGG | + | chr6_4:52088266-52088285 | None:intergenic | 50.0% | |
| GAGTCGTTCCTACGAATCTG+AGG | - | chr6_4:52088295-52088314 | Msa0990490:CDS | 50.0% | |
| ! | GTTCCTACGAATCTGAGGCT+CGG | - | chr6_4:52088300-52088319 | Msa0990490:CDS | 50.0% |
| ! | GACTCGGTAAAGAGGCATGT+AGG | + | chr6_4:52088403-52088422 | None:intergenic | 50.0% |
| CAAATGACACCTACTCCCTC+CGG | - | chr6_4:52089376-52089395 | Msa0990490:intron | 50.0% | |
| TAAATGTGACCGGAGGGAGT+AGG | + | chr6_4:52089388-52089407 | None:intergenic | 50.0% | |
| !!! | CCGCAGGAAATTTTTGGTGG+TGG | - | chr6_4:52090153-52090172 | Msa0990490:intron | 50.0% |
| !!! | GGAAATTTTTGGTGGTGGCC+GGG | - | chr6_4:52090158-52090177 | Msa0990490:intron | 50.0% |
| !!! | GAAATTTTTGGTGGTGGCCG+GGG | - | chr6_4:52090159-52090178 | Msa0990490:intron | 50.0% |
| GTGAGCTTAGCTCAGTTGGT+AGG | + | chr6_4:52090219-52090238 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | + | chr6_4:52090394-52090413 | None:intergenic | 50.0% | |
| ACCCATTTGGATGGGCCTAA+TGG | + | chr6_4:52090454-52090473 | None:intergenic | 50.0% | |
| ATGCTGACGAGGAGCAGTAA+GGG | + | chr6_4:52090730-52090749 | None:intergenic | 50.0% | |
| AATGCTGACGAGGAGCAGTA+AGG | + | chr6_4:52090731-52090750 | None:intergenic | 50.0% | |
| ! | GGCCACAAGGGACAACTTTT+GGG | + | chr6_4:52091191-52091210 | None:intergenic | 50.0% |
| GCCACACTTGGTACGTACTT+TGG | + | chr6_4:52091419-52091438 | None:intergenic | 50.0% | |
| !! | GGTACGTGAGTACCGAATTC+GGG | - | chr6_4:52092091-52092110 | Msa0990490:intron | 50.0% |
| ! | TACGCCGAAGTACCCGAATT+CGG | + | chr6_4:52092106-52092125 | None:intergenic | 50.0% |
| ATTCGGGTACTTCGGCGTAT+TGG | - | chr6_4:52092107-52092126 | Msa0990490:intron | 50.0% | |
| GAACCAAGCGTACCAAAGCA+TGG | - | chr6_4:52092145-52092164 | Msa0990490:intron | 50.0% | |
| CTCACTCAGTCCTCAACTCA+TGG | + | chr6_4:52092228-52092247 | None:intergenic | 50.0% | |
| TATACAGCTTCGGTACGCTC+CGG | + | chr6_4:52092364-52092383 | None:intergenic | 50.0% | |
| AACCCGAGACACCACCAAAA+AGG | + | chr6_4:52092546-52092565 | None:intergenic | 50.0% | |
| TTGTGGCACCACTTCCTATC+AGG | - | chr6_4:52093190-52093209 | Msa0990490:intron | 50.0% | |
| ATCGATTGCAGCCGAACACA+TGG | - | chr6_4:52093359-52093378 | Msa0990490:intron | 50.0% | |
| GGAGTGGTGCATACATGTTC+TGG | - | chr6_4:52093380-52093399 | Msa0990490:intron | 50.0% | |
| CTGGGGAAATGAGAATAGGG+AGG | - | chr6_4:52093399-52093418 | Msa0990490:intron | 50.0% | |
| AAACCATCAGGAGTTCCAGG+AGG | + | chr6_4:52093445-52093464 | None:intergenic | 50.0% | |
| GCAAAACCATCAGGAGTTCC+AGG | + | chr6_4:52093448-52093467 | None:intergenic | 50.0% | |
| !! | CTGGCATTGATGGTCTACGT+AGG | - | chr6_4:52093539-52093558 | Msa0990490:intron | 50.0% |
| ! | GATGGATCTCCAGCTGGTTC+TGG | - | chr6_4:52087515-52087534 | Msa0990490:intron | 55.0% |
| GAACCGAGCCTCAGATTCGT+AGG | + | chr6_4:52088306-52088325 | None:intergenic | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr6_4:52090223-52090242 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr6_4:52090220-52090239 | Msa0990490:intron | 55.0% | |
| ! | CTCTCCGGTGCCAATTTAGG+TGG | + | chr6_4:52090379-52090398 | None:intergenic | 55.0% |
| GAATCGAACCTGAGACCTCG+AGG | - | chr6_4:52090398-52090417 | Msa0990490:intron | 55.0% | |
| TGCTGACGAGGAGCAGTAAG+GGG | + | chr6_4:52090729-52090748 | None:intergenic | 55.0% | |
| ! | GGGCCACAAGGGACAACTTT+TGG | + | chr6_4:52091192-52091211 | None:intergenic | 55.0% |
| ! | CTTTGGTACGCTTGGTTCGC+TGG | + | chr6_4:52092143-52092162 | None:intergenic | 55.0% |
| ACGGTGAACCACCGTGATGT+TGG | + | chr6_4:52092900-52092919 | None:intergenic | 55.0% | |
| TTGCAGCCGAACACATGGAG+TGG | - | chr6_4:52093364-52093383 | Msa0990490:intron | 55.0% | |
| GGAGGAGATGAAGCTCGCAA+TGG | + | chr6_4:52093427-52093446 | None:intergenic | 55.0% | |
| TTGCGAGCTTCATCTCCTCC+TGG | - | chr6_4:52093427-52093446 | Msa0990490:intron | 55.0% | |
| TCTCCTCCTGGAACTCCTGA+TGG | - | chr6_4:52093439-52093458 | Msa0990490:intron | 55.0% | |
| !!! | GGGGCGTTTTGTGGTGGACA+AGG | + | chr6_4:52089940-52089959 | None:intergenic | 60.0% |
| AAGGTCCGGGGTTCAAACCC+CGG | + | chr6_4:52090179-52090198 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTCGAGG+AGG | - | chr6_4:52090401-52090420 | Msa0990490:intron | 60.0% | |
| TTCGTTCCGGTACGCGGTAC+GGG | + | chr6_4:52092435-52092454 | None:intergenic | 60.0% | |
| GTTCGTTCCGGTACGCGGTA+CGG | + | chr6_4:52092436-52092455 | None:intergenic | 60.0% | |
| GTGCTCCTCCTCGAGGTCTC+AGG | + | chr6_4:52090409-52090428 | None:intergenic | 65.0% | |
| ! | TGGGAGTGTGCTCCTCCTCG+AGG | + | chr6_4:52090416-52090435 | None:intergenic | 65.0% |
| ! | TCGAGGAGGAGCACACTCCC+AGG | - | chr6_4:52090415-52090434 | Msa0990490:intron | 65.0% |
| TCCGGTACGCGGTACGGGTA+CGG | + | chr6_4:52092430-52092449 | None:intergenic | 65.0% | |
| TCGCGGTTCGTTCCGGTACG+CGG | + | chr6_4:52092441-52092460 | None:intergenic | 65.0% | |
| GGTGGCCGGGGTTTGAACCC+CGG | - | chr6_4:52090171-52090190 | Msa0990490:intron | 70.0% | |
| ACGGGTTCGCGGTACGCGAC+AGG | + | chr6_4:52092411-52092430 | None:intergenic | 70.0% | |
| GCGGTACGGGTACGGGTTCG+CGG | + | chr6_4:52092422-52092441 | None:intergenic | 70.0% | |
| CCGGTACGCGGTACGGGTAC+GGG | + | chr6_4:52092429-52092448 | None:intergenic | 70.0% | |
| CCCGTACCCGTACCGCGTAC+CGG | - | chr6_4:52092426-52092445 | Msa0990490:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 52087215 | 52094220 | 52087215 | ID=Msa0990490;Name=Msa0990490 |
| chr6_4 | mRNA | 52087215 | 52094220 | 52087215 | ID=Msa0990490-mRNA-1;Parent=Msa0990490;Name=Msa0990490-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.88|0.6|1|1|1|10|0|454 |
| chr6_4 | exon | 52094101 | 52094220 | 52094101 | ID=Msa0990490-mRNA-1:exon:10953;Parent=Msa0990490-mRNA-1 |
| chr6_4 | exon | 52093835 | 52094007 | 52093835 | ID=Msa0990490-mRNA-1:exon:10952;Parent=Msa0990490-mRNA-1 |
| chr6_4 | exon | 52093605 | 52093725 | 52093605 | ID=Msa0990490-mRNA-1:exon:10951;Parent=Msa0990490-mRNA-1 |
| chr6_4 | exon | 52090825 | 52090877 | 52090825 | ID=Msa0990490-mRNA-1:exon:10950;Parent=Msa0990490-mRNA-1 |
| chr6_4 | exon | 52090615 | 52090744 | 52090615 | ID=Msa0990490-mRNA-1:exon:10949;Parent=Msa0990490-mRNA-1 |
| chr6_4 | exon | 52090015 | 52090160 | 52090015 | ID=Msa0990490-mRNA-1:exon:10948;Parent=Msa0990490-mRNA-1 |
| chr6_4 | exon | 52088224 | 52088412 | 52088224 | ID=Msa0990490-mRNA-1:exon:10947;Parent=Msa0990490-mRNA-1 |
| chr6_4 | exon | 52087849 | 52088081 | 52087849 | ID=Msa0990490-mRNA-1:exon:10946;Parent=Msa0990490-mRNA-1 |
| chr6_4 | exon | 52087535 | 52087671 | 52087535 | ID=Msa0990490-mRNA-1:exon:10945;Parent=Msa0990490-mRNA-1 |
| chr6_4 | exon | 52087215 | 52087277 | 52087215 | ID=Msa0990490-mRNA-1:exon:10944;Parent=Msa0990490-mRNA-1 |
| chr6_4 | CDS | 52094101 | 52094220 | 52094101 | ID=Msa0990490-mRNA-1:cds;Parent=Msa0990490-mRNA-1 |
| chr6_4 | CDS | 52093835 | 52094007 | 52093835 | ID=Msa0990490-mRNA-1:cds;Parent=Msa0990490-mRNA-1 |
| chr6_4 | CDS | 52093605 | 52093725 | 52093605 | ID=Msa0990490-mRNA-1:cds;Parent=Msa0990490-mRNA-1 |
| chr6_4 | CDS | 52090825 | 52090877 | 52090825 | ID=Msa0990490-mRNA-1:cds;Parent=Msa0990490-mRNA-1 |
| chr6_4 | CDS | 52090615 | 52090744 | 52090615 | ID=Msa0990490-mRNA-1:cds;Parent=Msa0990490-mRNA-1 |
| chr6_4 | CDS | 52090015 | 52090160 | 52090015 | ID=Msa0990490-mRNA-1:cds;Parent=Msa0990490-mRNA-1 |
| chr6_4 | CDS | 52088224 | 52088412 | 52088224 | ID=Msa0990490-mRNA-1:cds;Parent=Msa0990490-mRNA-1 |
| chr6_4 | CDS | 52087849 | 52088081 | 52087849 | ID=Msa0990490-mRNA-1:cds;Parent=Msa0990490-mRNA-1 |
| chr6_4 | CDS | 52087535 | 52087671 | 52087535 | ID=Msa0990490-mRNA-1:cds;Parent=Msa0990490-mRNA-1 |
| chr6_4 | CDS | 52087215 | 52087277 | 52087215 | ID=Msa0990490-mRNA-1:cds;Parent=Msa0990490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
